Merge remote-tracking branch 'origin/dev' into feature/organic-extraction

add open_timeout parameter to websocket connection
add TimeoutError and InvalidStatus exception handling
implement exponential backoff for reconnection attempts
simplify reconnection logic flow

.conda/base/recipe.yaml

@@ -3,7 +3,7 @@
 
 package:
   name: unilabos
-  version: 0.10.17
+  version: 0.10.18
 
 source:
   path: ../../unilabos
@@ -46,13 +46,15 @@ requirements:
   - jinja2
   - requests
   - uvicorn
-  - opcua
+  - if: not osx
+    then:
+    - opcua
   - pyserial
   - pandas
   - pymodbus
   - matplotlib
   - pylibftdi
-  - uni-lab::unilabos-env ==0.10.17
+  - uni-lab::unilabos-env ==0.10.18
 
 about:
   repository: https://github.com/deepmodeling/Uni-Lab-OS

.conda/environment/recipe.yaml

@@ -2,7 +2,7 @@
 
 package:
   name: unilabos-env
-  version: 0.10.17
+  version: 0.10.18
 
 build:
   noarch: generic

.conda/full/recipe.yaml

@@ -3,7 +3,7 @@
 
 package:
   name: unilabos-full
-  version: 0.10.17
+  version: 0.10.18
 
 build:
   noarch: generic
@@ -11,7 +11,7 @@ build:
 requirements:
   run:
   # Base unilabos package (includes unilabos-env)
-  - uni-lab::unilabos ==0.10.17
+  - uni-lab::unilabos ==0.10.18
   # Documentation tools
   - sphinx
   - sphinx_rtd_theme

.cursor/rules/device-drivers.mdc

@@ -0,0 +1,328 @@
+---
+description: 设备驱动开发规范
+globs: ["unilabos/devices/**/*.py"]
+---
+
+# 设备驱动开发规范
+
+## 目录结构
+
+```
+unilabos/devices/
+├── virtual/           # 虚拟设备（用于测试）
+│   ├── virtual_stirrer.py
+│   └── virtual_centrifuge.py
+├── liquid_handling/   # 液体处理设备
+├── balance/           # 天平设备
+├── hplc/              # HPLC设备
+├── pump_and_valve/    # 泵和阀门
+├── temperature/       # 温度控制设备
+├── workstation/       # 工作站（组合设备）
+└── ...
+```
+
+## 设备类完整模板
+
+```python
+import asyncio
+import logging
+import time as time_module
+from typing import Dict, Any, Optional
+
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+
+
+class MyDevice:
+    """
+    设备类描述
+
+    Attributes:
+        device_id: 设备唯一标识
+        config: 设备配置字典
+        data: 设备状态数据
+    """
+
+    _ros_node: BaseROS2DeviceNode
+
+    def __init__(
+        self,
+        device_id: str = None,
+        config: Dict[str, Any] = None,
+        **kwargs
+    ):
+        """
+        初始化设备
+
+        Args:
+            device_id: 设备ID
+            config: 配置字典
+            **kwargs: 其他参数
+        """
+        # 兼容不同调用方式
+        if device_id is None and 'id' in kwargs:
+            device_id = kwargs.pop('id')
+        if config is None and 'config' in kwargs:
+            config = kwargs.pop('config')
+
+        self.device_id = device_id or "unknown_device"
+        self.config = config or {}
+        self.data = {}
+
+        # 从config读取参数
+        self.port = self.config.get('port') or kwargs.get('port', 'COM1')
+        self._max_value = self.config.get('max_value', 1000.0)
+
+        # 初始化日志
+        self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
+
+        self.logger.info(f"设备 {self.device_id} 已创建")
+
+    def post_init(self, ros_node: BaseROS2DeviceNode):
+        """
+        ROS节点注入 - 在ROS节点创建后调用
+
+        Args:
+            ros_node: ROS2设备节点实例
+        """
+        self._ros_node = ros_node
+
+    async def initialize(self) -> bool:
+        """
+        初始化设备 - 连接硬件、设置初始状态
+
+        Returns:
+            bool: 初始化是否成功
+        """
+        self.logger.info(f"初始化设备 {self.device_id}")
+
+        try:
+            # 执行硬件初始化
+            # await self._connect_hardware()
+
+            # 设置初始状态
+            self.data.update({
+                "status": "待机",
+                "is_running": False,
+                "current_value": 0.0,
+            })
+
+            self.logger.info(f"设备 {self.device_id} 初始化完成")
+            return True
+
+        except Exception as e:
+            self.logger.error(f"初始化失败: {e}")
+            self.data["status"] = f"错误: {e}"
+            return False
+
+    async def cleanup(self) -> bool:
+        """
+        清理设备 - 断开连接、释放资源
+
+        Returns:
+            bool: 清理是否成功
+        """
+        self.logger.info(f"清理设备 {self.device_id}")
+
+        self.data.update({
+            "status": "离线",
+            "is_running": False,
+        })
+
+        return True
+
+    # ==================== 设备动作 ====================
+
+    async def execute_action(
+        self,
+        param1: float,
+        param2: str = "",
+        **kwargs
+    ) -> bool:
+        """
+        执行设备动作
+
+        Args:
+            param1: 参数1
+            param2: 参数2（可选）
+
+        Returns:
+            bool: 动作是否成功
+        """
+        # 类型转换和验证
+        try:
+            param1 = float(param1)
+        except (ValueError, TypeError) as e:
+            self.logger.error(f"参数类型错误: {e}")
+            return False
+
+        # 参数验证
+        if param1 > self._max_value:
+            self.logger.error(f"参数超出范围: {param1} > {self._max_value}")
+            return False
+
+        self.logger.info(f"执行动作: param1={param1}, param2={param2}")
+
+        # 更新状态
+        self.data.update({
+            "status": "运行中",
+            "is_running": True,
+        })
+
+        # 执行动作（带进度反馈）
+        duration = 10.0  # 秒
+        start_time = time_module.time()
+
+        while True:
+            elapsed = time_module.time() - start_time
+            remaining = max(0, duration - elapsed)
+            progress = min(100, (elapsed / duration) * 100)
+
+            self.data.update({
+                "status": f"运行中: {progress:.0f}%",
+                "remaining_time": remaining,
+            })
+
+            if remaining <= 0:
+                break
+
+            await self._ros_node.sleep(1.0)
+
+        # 完成
+        self.data.update({
+            "status": "完成",
+            "is_running": False,
+        })
+
+        self.logger.info("动作执行完成")
+        return True
+
+    # ==================== 状态属性 ====================
+
+    @property
+    def status(self) -> str:
+        """设备状态 - 自动发布为ROS Topic"""
+        return self.data.get("status", "未知")
+
+    @property
+    def is_running(self) -> bool:
+        """是否正在运行"""
+        return self.data.get("is_running", False)
+
+    @property
+    def current_value(self) -> float:
+        """当前值"""
+        return self.data.get("current_value", 0.0)
+
+    # ==================== 辅助方法 ====================
+
+    def get_device_info(self) -> Dict[str, Any]:
+        """获取设备信息"""
+        return {
+            "device_id": self.device_id,
+            "status": self.status,
+            "is_running": self.is_running,
+            "current_value": self.current_value,
+        }
+
+    def __str__(self) -> str:
+        return f"MyDevice({self.device_id}: {self.status})"
+```
+
+## 关键规则
+
+### 1. 参数处理
+
+所有动作方法的参数都可能以字符串形式传入，必须进行类型转换：
+
+```python
+async def my_action(self, value: float, **kwargs) -> bool:
+    # 始终进行类型转换
+    try:
+        value = float(value)
+    except (ValueError, TypeError) as e:
+        self.logger.error(f"参数类型错误: {e}")
+        return False
+```
+
+### 2. vessel 参数处理
+
+vessel 参数可能是字符串ID或字典：
+
+```python
+def extract_vessel_id(vessel: Union[str, dict]) -> str:
+    if isinstance(vessel, dict):
+        return vessel.get("id", "")
+    return str(vessel) if vessel else ""
+```
+
+### 3. 状态更新
+
+使用 `self.data` 字典存储状态，属性读取状态：
+
+```python
+# 更新状态
+self.data["status"] = "运行中"
+self.data["current_speed"] = 300.0
+
+# 读取状态（通过属性）
+@property
+def status(self) -> str:
+    return self.data.get("status", "待机")
+```
+
+### 4. 异步等待
+
+使用 ROS 节点的 sleep 方法：
+
+```python
+# 正确
+await self._ros_node.sleep(1.0)
+
+# 避免（除非在纯 Python 测试环境）
+await asyncio.sleep(1.0)
+```
+
+### 5. 进度反馈
+
+长时间运行的操作需要提供进度反馈：
+
+```python
+while remaining > 0:
+    progress = (elapsed / total_time) * 100
+    self.data["status"] = f"运行中: {progress:.0f}%"
+    self.data["remaining_time"] = remaining
+
+    await self._ros_node.sleep(1.0)
+```
+
+## 虚拟设备
+
+虚拟设备用于测试和演示，放在 `unilabos/devices/virtual/` 目录：
+
+- 类名以 `Virtual` 开头
+- 文件名以 `virtual_` 开头
+- 模拟真实设备的行为和时序
+- 使用表情符号增强日志可读性（可选）
+
+## 工作站设备
+
+工作站是组合多个设备的复杂设备：
+
+```python
+from unilabos.devices.workstation.workstation_base import WorkstationBase
+
+class MyWorkstation(WorkstationBase):
+    """组合工作站"""
+
+    async def execute_workflow(self, workflow: Dict[str, Any]) -> bool:
+        """执行工作流"""
+        pass
+```
+
+## 设备注册
+
+设备类开发完成后，需要在注册表中注册：
+
+1. 创建/编辑 `unilabos/registry/devices/my_category.yaml`
+2. 添加设备配置（参考 `virtual_device.yaml`）
+3. 运行 `--complete_registry` 自动生成 schema

.cursor/rules/protocol-development.mdc

@@ -0,0 +1,240 @@
+---
+description: 协议编译器开发规范
+globs: ["unilabos/compile/**/*.py"]
+---
+
+# 协议编译器开发规范
+
+## 概述
+
+协议编译器负责将高级实验操作（如 Stir、Add、Filter）编译为设备可执行的动作序列。
+
+## 文件命名
+
+- 位置: `unilabos/compile/`
+- 命名: `{operation}_protocol.py`
+- 示例: `stir_protocol.py`, `add_protocol.py`, `filter_protocol.py`
+
+## 协议函数模板
+
+```python
+from typing import List, Dict, Any, Union
+import networkx as nx
+import logging
+
+from .utils.unit_parser import parse_time_input
+from .utils.vessel_parser import extract_vessel_id
+
+logger = logging.getLogger(__name__)
+
+
+def generate_{operation}_protocol(
+    G: nx.DiGraph,
+    vessel: Union[str, dict],
+    param1: Union[str, float] = "0",
+    param2: float = 0.0,
+    **kwargs
+) -> List[Dict[str, Any]]:
+    """
+    生成{操作}协议序列
+
+    Args:
+        G: 物理拓扑图 (NetworkX DiGraph)
+        vessel: 容器ID或Resource字典
+        param1: 参数1（支持字符串单位，如 "5 min"）
+        param2: 参数2
+        **kwargs: 其他参数
+
+    Returns:
+        List[Dict]: 动作序列
+
+    Raises:
+        ValueError: 参数无效时
+    """
+    # 1. 提取 vessel_id
+    vessel_id = extract_vessel_id(vessel)
+
+    # 2. 验证参数
+    if not vessel_id:
+        raise ValueError("vessel 参数不能为空")
+
+    if vessel_id not in G.nodes():
+        raise ValueError(f"容器 '{vessel_id}' 不存在于系统中")
+
+    # 3. 解析参数（支持单位）
+    parsed_param1 = parse_time_input(param1)  # "5 min" -> 300.0
+
+    # 4. 查找设备
+    device_id = find_connected_device(G, vessel_id, device_type="my_device")
+
+    # 5. 生成动作序列
+    action_sequence = []
+
+    action = {
+        "device_id": device_id,
+        "action_name": "my_action",
+        "action_kwargs": {
+            "vessel": {"id": vessel_id},  # 始终使用字典格式
+            "param1": float(parsed_param1),
+            "param2": float(param2),
+        }
+    }
+    action_sequence.append(action)
+
+    logger.info(f"生成协议: {len(action_sequence)} 个动作")
+    return action_sequence
+
+
+def find_connected_device(
+    G: nx.DiGraph,
+    vessel_id: str,
+    device_type: str = ""
+) -> str:
+    """
+    查找与容器相连的设备
+
+    Args:
+        G: 拓扑图
+        vessel_id: 容器ID
+        device_type: 设备类型关键字
+
+    Returns:
+        str: 设备ID
+    """
+    # 查找所有匹配类型的设备
+    device_nodes = []
+    for node in G.nodes():
+        node_class = G.nodes[node].get('class', '') or ''
+        if device_type.lower() in node_class.lower():
+            device_nodes.append(node)
+
+    # 检查连接
+    if vessel_id and device_nodes:
+        for device in device_nodes:
+            if G.has_edge(device, vessel_id) or G.has_edge(vessel_id, device):
+                return device
+
+    # 返回第一个可用设备
+    if device_nodes:
+        return device_nodes[0]
+
+    # 默认设备
+    return f"{device_type}_1"
+```
+
+## 关键规则
+
+### 1. vessel 参数处理
+
+vessel 参数可能是字符串或字典，需要统一处理：
+
+```python
+def extract_vessel_id(vessel: Union[str, dict]) -> str:
+    """提取vessel_id"""
+    if isinstance(vessel, dict):
+        # 可能是 {"id": "xxx"} 或完整 Resource 对象
+        return vessel.get("id", list(vessel.values())[0].get("id", ""))
+    return str(vessel) if vessel else ""
+```
+
+### 2. action_kwargs 中的 vessel
+
+始终使用 `{"id": vessel_id}` 格式传递 vessel：
+
+```python
+# 正确
+"action_kwargs": {
+    "vessel": {"id": vessel_id},  # 字符串ID包装为字典
+}
+
+# 避免
+"action_kwargs": {
+    "vessel": vessel_resource,  # 不要传递完整 Resource 对象
+}
+```
+
+### 3. 单位解析
+
+使用 `parse_time_input` 解析时间参数：
+
+```python
+from .utils.unit_parser import parse_time_input
+
+# 支持格式: "5 min", "1 h", "300", "1.5 hours"
+time_seconds = parse_time_input("5 min")  # -> 300.0
+time_seconds = parse_time_input(120)      # -> 120.0
+time_seconds = parse_time_input("1 h")    # -> 3600.0
+```
+
+### 4. 参数验证
+
+所有参数必须进行验证和类型转换：
+
+```python
+# 验证范围
+if speed < 10.0 or speed > 1500.0:
+    logger.warning(f"速度 {speed} 超出范围，修正为 300")
+    speed = 300.0
+
+# 类型转换
+param = float(param) if not isinstance(param, (int, float)) else param
+```
+
+### 5. 日志记录
+
+使用项目日志记录器：
+
+```python
+logger = logging.getLogger(__name__)
+
+def generate_protocol(...):
+    logger.info(f"开始生成协议...")
+    logger.debug(f"参数: vessel={vessel_id}, time={time}")
+    logger.warning(f"参数修正: {old_value} -> {new_value}")
+```
+
+## 便捷函数
+
+为常用操作提供便捷函数：
+
+```python
+def stir_briefly(G: nx.DiGraph, vessel: Union[str, dict],
+                speed: float = 300.0) -> List[Dict[str, Any]]:
+    """短时间搅拌（30秒）"""
+    return generate_stir_protocol(G, vessel, time="30", stir_speed=speed)
+
+def stir_vigorously(G: nx.DiGraph, vessel: Union[str, dict],
+                   time: str = "5 min") -> List[Dict[str, Any]]:
+    """剧烈搅拌"""
+    return generate_stir_protocol(G, vessel, time=time, stir_speed=800.0)
+```
+
+## 测试函数
+
+每个协议文件应包含测试函数：
+
+```python
+def test_{operation}_protocol():
+    """测试协议生成"""
+    # 测试参数处理
+    vessel_dict = {"id": "flask_1", "name": "反应瓶1"}
+    vessel_id = extract_vessel_id(vessel_dict)
+    assert vessel_id == "flask_1"
+
+    # 测试单位解析
+    time_s = parse_time_input("5 min")
+    assert time_s == 300.0
+
+
+if __name__ == "__main__":
+    test_{operation}_protocol()
+```
+
+## 现有协议参考
+
+- `stir_protocol.py` - 搅拌操作
+- `add_protocol.py` - 添加物料
+- `filter_protocol.py` - 过滤操作
+- `heatchill_protocol.py` - 加热/冷却
+- `separate_protocol.py` - 分离操作
+- `evaporate_protocol.py` - 蒸发操作

.cursor/rules/registry-config.mdc

@@ -0,0 +1,319 @@
+---
+description: 注册表配置规范 (YAML)
+globs: ["unilabos/registry/**/*.yaml"]
+---
+
+# 注册表配置规范
+
+## 概述
+
+注册表使用 YAML 格式定义设备和资源类型，是 Uni-Lab-OS 的核心配置系统。
+
+## 目录结构
+
+```
+unilabos/registry/
+├── devices/              # 设备类型注册
+│   ├── virtual_device.yaml
+│   ├── liquid_handler.yaml
+│   └── ...
+├── device_comms/         # 通信设备配置
+│   ├── communication_devices.yaml
+│   └── modbus_ioboard.yaml
+└── resources/            # 资源类型注册
+    ├── bioyond/
+    ├── organic/
+    ├── opentrons/
+    └── ...
+```
+
+## 设备注册表格式
+
+### 基本结构
+
+```yaml
+device_type_id:
+  # 基本信息
+  description: "设备描述"
+  version: "1.0.0"
+  category:
+    - category_name
+  icon: "icon_device.webp"
+
+  # 类配置
+  class:
+    module: "unilabos.devices.my_module:MyClass"
+    type: python
+
+    # 状态类型（属性 -> ROS消息类型）
+    status_types:
+      status: String
+      temperature: Float64
+      is_running: Bool
+
+    # 动作映射
+    action_value_mappings:
+      action_name:
+        type: UniLabJsonCommand  # 或 UniLabJsonCommandAsync
+        goal: {}
+        feedback: {}
+        result: {}
+        schema: {...}
+        handles: {}
+```
+
+### action_value_mappings 详细格式
+
+```yaml
+action_value_mappings:
+  # 同步动作
+  my_sync_action:
+    type: UniLabJsonCommand
+    goal:
+      param1: param1
+      param2: param2
+    feedback: {}
+    result:
+      success: success
+      message: message
+    goal_default:
+      param1: 0.0
+      param2: ""
+    handles: {}
+    placeholder_keys:
+      device_param: unilabos_devices   # 设备选择器
+      resource_param: unilabos_resources  # 资源选择器
+    schema:
+      title: "动作名称参数"
+      description: "动作描述"
+      type: object
+      properties:
+        goal:
+          type: object
+          properties:
+            param1:
+              type: number
+            param2:
+              type: string
+          required:
+            - param1
+        feedback: {}
+        result:
+          type: object
+          properties:
+            success:
+              type: boolean
+            message:
+              type: string
+      required:
+        - goal
+
+  # 异步动作
+  my_async_action:
+    type: UniLabJsonCommandAsync
+    goal: {}
+    feedback:
+      progress: progress
+      current_status: status
+    result:
+      success: success
+    schema: {...}
+```
+
+### 自动生成的动作
+
+以 `auto-` 开头的动作由系统自动生成：
+
+```yaml
+action_value_mappings:
+  auto-initialize:
+    type: UniLabJsonCommandAsync
+    goal: {}
+    feedback: {}
+    result: {}
+    schema: {...}
+
+  auto-cleanup:
+    type: UniLabJsonCommandAsync
+    goal: {}
+    feedback: {}
+    result: {}
+    schema: {...}
+```
+
+### handles 配置
+
+用于工作流编辑器中的数据流连接：
+
+```yaml
+handles:
+  input:
+    - handler_key: "input_resource"
+      data_type: "resource"
+      label: "输入资源"
+      data_source: "handle"
+      data_key: "resources"
+  output:
+    - handler_key: "output_labware"
+      data_type: "resource"
+      label: "输出器皿"
+      data_source: "executor"
+      data_key: "created_resource.@flatten"
+```
+
+## 资源注册表格式
+
+```yaml
+resource_type_id:
+  description: "资源描述"
+  version: "1.0.0"
+  category:
+    - category_name
+  icon: ""
+  handles: []
+  init_param_schema: {}
+
+  class:
+    module: "unilabos.resources.my_module:MyResource"
+    type: pylabrobot  # 或 python
+```
+
+### PyLabRobot 资源示例
+
+```yaml
+BIOYOND_Electrolyte_6VialCarrier:
+  category:
+    - bottle_carriers
+    - bioyond
+  class:
+    module: "unilabos.resources.bioyond.bottle_carriers:BIOYOND_Electrolyte_6VialCarrier"
+    type: pylabrobot
+  version: "1.0.0"
+```
+
+## 状态类型映射
+
+Python 类型到 ROS 消息类型的映射：
+
+| Python 类型 | ROS 消息类型 |
+|------------|-------------|
+| `str` | `String` |
+| `bool` | `Bool` |
+| `int` | `Int64` |
+| `float` | `Float64` |
+| `list` | `String` (序列化) |
+| `dict` | `String` (序列化) |
+
+## 自动完善注册表
+
+使用 `--complete_registry` 参数自动生成 schema：
+
+```bash
+python -m unilabos.app.main --complete_registry
+```
+
+这会：
+1. 扫描设备类的方法签名
+2. 自动生成 `auto-` 前缀的动作
+3. 生成 JSON Schema
+4. 更新 YAML 文件
+
+## 验证规则
+
+1. **device_type_id** 必须唯一
+2. **module** 路径必须正确可导入
+3. **status_types** 的类型必须是有效的 ROS 消息类型
+4. **schema** 必须是有效的 JSON Schema
+
+## 示例：完整设备配置
+
+```yaml
+virtual_stirrer:
+  category:
+    - virtual_device
+  description: "虚拟搅拌器设备"
+  version: "1.0.0"
+  icon: "icon_stirrer.webp"
+  handles: []
+  init_param_schema: {}
+
+  class:
+    module: "unilabos.devices.virtual.virtual_stirrer:VirtualStirrer"
+    type: python
+
+    status_types:
+      status: String
+      operation_mode: String
+      current_speed: Float64
+      is_stirring: Bool
+      remaining_time: Float64
+
+    action_value_mappings:
+      auto-initialize:
+        type: UniLabJsonCommandAsync
+        goal: {}
+        feedback: {}
+        result: {}
+        schema:
+          title: "initialize参数"
+          type: object
+          properties:
+            goal:
+              type: object
+              properties: {}
+            feedback: {}
+            result: {}
+          required:
+            - goal
+
+      stir:
+        type: UniLabJsonCommandAsync
+        goal:
+          stir_time: stir_time
+          stir_speed: stir_speed
+          settling_time: settling_time
+        feedback:
+          current_speed: current_speed
+          remaining_time: remaining_time
+        result:
+          success: success
+        goal_default:
+          stir_time: 60.0
+          stir_speed: 300.0
+          settling_time: 30.0
+        handles: {}
+        schema:
+          title: "stir参数"
+          description: "搅拌操作"
+          type: object
+          properties:
+            goal:
+              type: object
+              properties:
+                stir_time:
+                  type: number
+                  description: "搅拌时间（秒）"
+                stir_speed:
+                  type: number
+                  description: "搅拌速度（RPM）"
+                settling_time:
+                  type: number
+                  description: "沉降时间（秒）"
+              required:
+                - stir_time
+                - stir_speed
+            feedback:
+              type: object
+              properties:
+                current_speed:
+                  type: number
+                remaining_time:
+                  type: number
+            result:
+              type: object
+              properties:
+                success:
+                  type: boolean
+          required:
+            - goal
+```

.cursor/rules/ros-integration.mdc

@@ -0,0 +1,233 @@
+---
+description: ROS 2 集成开发规范
+globs: ["unilabos/ros/**/*.py", "**/*_node.py"]
+---
+
+# ROS 2 集成开发规范
+
+## 概述
+
+Uni-Lab-OS 使用 ROS 2 作为设备通信中间件，基于 rclpy 实现。
+
+## 核心组件
+
+### BaseROS2DeviceNode
+
+设备节点基类，提供：
+- ROS Topic 自动发布（状态属性）
+- Action Server 自动创建（设备动作）
+- 资源管理服务
+- 异步任务调度
+
+```python
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+```
+
+### 消息转换器
+
+```python
+from unilabos.ros.msgs.message_converter import (
+    convert_to_ros_msg,
+    convert_from_ros_msg_with_mapping,
+    msg_converter_manager,
+    ros_action_to_json_schema,
+    ros_message_to_json_schema,
+)
+```
+
+## 设备与 ROS 集成
+
+### post_init 方法
+
+设备类必须实现 `post_init` 方法接收 ROS 节点：
+
+```python
+class MyDevice:
+    _ros_node: BaseROS2DeviceNode
+
+    def post_init(self, ros_node: BaseROS2DeviceNode):
+        """ROS节点注入"""
+        self._ros_node = ros_node
+```
+
+### 状态属性发布
+
+设备的 `@property` 属性会自动发布为 ROS Topic：
+
+```python
+class MyDevice:
+    @property
+    def temperature(self) -> float:
+        return self._temperature
+
+    # 自动发布到 /{namespace}/temperature Topic
+```
+
+### Topic 配置装饰器
+
+```python
+from unilabos.utils.decorator import topic_config
+
+class MyDevice:
+    @property
+    @topic_config(period=1.0, print_publish=False, qos=10)
+    def fast_data(self) -> float:
+        """高频数据 - 每秒发布一次"""
+        return self._fast_data
+
+    @property
+    @topic_config(period=5.0)
+    def slow_data(self) -> str:
+        """低频数据 - 每5秒发布一次"""
+        return self._slow_data
+```
+
+### 订阅装饰器
+
+```python
+from unilabos.utils.decorator import subscribe
+
+class MyDevice:
+    @subscribe(topic="/external/sensor_data", qos=10)
+    def on_sensor_data(self, msg):
+        """订阅外部Topic"""
+        self._sensor_value = msg.data
+```
+
+## 异步操作
+
+### 使用 ROS 节点睡眠
+
+```python
+# 推荐：使用ROS节点的睡眠方法
+await self._ros_node.sleep(1.0)
+
+# 不推荐：直接使用asyncio（可能导致回调阻塞）
+await asyncio.sleep(1.0)
+```
+
+### 获取事件循环
+
+```python
+from unilabos.ros.x.rclpyx import get_event_loop
+
+loop = get_event_loop()
+```
+
+## 消息类型
+
+### unilabos_msgs 包
+
+```python
+from unilabos_msgs.msg import Resource
+from unilabos_msgs.srv import (
+    ResourceAdd,
+    ResourceDelete,
+    ResourceUpdate,
+    ResourceList,
+    SerialCommand,
+)
+from unilabos_msgs.action import SendCmd
+```
+
+### Resource 消息结构
+
+```python
+Resource:
+    id: str
+    name: str
+    category: str
+    type: str
+    parent: str
+    children: List[str]
+    config: str  # JSON字符串
+    data: str    # JSON字符串
+    sample_id: str
+    pose: Pose
+```
+
+## 日志适配器
+
+```python
+from unilabos.utils.log import info, debug, warning, error, trace
+
+class MyDevice:
+    def __init__(self):
+        # 创建设备专属日志器
+        self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
+```
+
+ROSLoggerAdapter 同时向自定义日志和 ROS 日志发送消息。
+
+## Action Server
+
+设备动作自动创建为 ROS Action Server：
+
+```yaml
+# 在注册表中配置
+action_value_mappings:
+  my_action:
+    type: UniLabJsonCommandAsync  # 异步Action
+    goal: {...}
+    feedback: {...}
+    result: {...}
+```
+
+### Action 类型
+
+- **UniLabJsonCommand**: 同步动作
+- **UniLabJsonCommandAsync**: 异步动作（支持feedback）
+
+## 服务客户端
+
+```python
+from rclpy.client import Client
+
+# 调用其他节点的服务
+response = await self._ros_node.call_service(
+    service_name="/other_node/service",
+    request=MyServiceRequest(...)
+)
+```
+
+## 命名空间
+
+设备节点使用命名空间隔离：
+
+```
+/{device_id}/                 # 设备命名空间
+/{device_id}/status          # 状态Topic
+/{device_id}/temperature     # 温度Topic
+/{device_id}/my_action       # 动作Server
+```
+
+## 调试
+
+### 查看 Topic
+
+```bash
+ros2 topic list
+ros2 topic echo /{device_id}/status
+```
+
+### 查看 Action
+
+```bash
+ros2 action list
+ros2 action info /{device_id}/my_action
+```
+
+### 查看 Service
+
+```bash
+ros2 service list
+ros2 service call /{device_id}/resource_list unilabos_msgs/srv/ResourceList
+```
+
+## 最佳实践
+
+1. **状态属性命名**: 使用蛇形命名法（snake_case）
+2. **Topic 频率**: 根据数据变化频率调整，避免过高频率
+3. **Action 反馈**: 长时间操作提供进度反馈
+4. **错误处理**: 使用 try-except 捕获并记录错误
+5. **资源清理**: 在 cleanup 方法中正确清理资源

.cursor/rules/testing-patterns.mdc

@@ -0,0 +1,357 @@
+---
+description: 测试开发规范
+globs: ["tests/**/*.py", "**/test_*.py"]
+---
+
+# 测试开发规范
+
+## 目录结构
+
+```
+tests/
+├── __init__.py
+├── devices/              # 设备测试
+│   └── liquid_handling/
+│       └── test_transfer_liquid.py
+├── resources/            # 资源测试
+│   ├── test_bottle_carrier.py
+│   └── test_resourcetreeset.py
+├── ros/                  # ROS消息测试
+│   └── msgs/
+│       ├── test_basic.py
+│       ├── test_conversion.py
+│       └── test_mapping.py
+└── workflow/             # 工作流测试
+    └── merge_workflow.py
+```
+
+## 测试框架
+
+使用 pytest 作为测试框架：
+
+```bash
+# 运行所有测试
+pytest tests/
+
+# 运行特定测试文件
+pytest tests/resources/test_bottle_carrier.py
+
+# 运行特定测试函数
+pytest tests/resources/test_bottle_carrier.py::test_bottle_carrier
+
+# 显示详细输出
+pytest -v tests/
+
+# 显示打印输出
+pytest -s tests/
+```
+
+## 测试文件模板
+
+```python
+import pytest
+from typing import List, Dict, Any
+
+# 导入被测试的模块
+from unilabos.resources.bioyond.bottle_carriers import (
+    BIOYOND_Electrolyte_6VialCarrier,
+)
+from unilabos.resources.bioyond.bottles import (
+    BIOYOND_PolymerStation_Solid_Vial,
+)
+
+
+class TestBottleCarrier:
+    """BottleCarrier 测试类"""
+
+    def setup_method(self):
+        """每个测试方法前执行"""
+        self.carrier = BIOYOND_Electrolyte_6VialCarrier("test_carrier")
+
+    def teardown_method(self):
+        """每个测试方法后执行"""
+        pass
+
+    def test_carrier_creation(self):
+        """测试载架创建"""
+        assert self.carrier.name == "test_carrier"
+        assert len(self.carrier.sites) == 6
+
+    def test_bottle_placement(self):
+        """测试瓶子放置"""
+        bottle = BIOYOND_PolymerStation_Solid_Vial("test_bottle")
+        # 测试逻辑...
+        assert bottle.name == "test_bottle"
+
+
+def test_standalone_function():
+    """独立测试函数"""
+    result = some_function()
+    assert result is True
+
+
+# 参数化测试
+@pytest.mark.parametrize("input,expected", [
+    ("5 min", 300.0),
+    ("1 h", 3600.0),
+    ("120", 120.0),
+    (60, 60.0),
+])
+def test_time_parsing(input, expected):
+    """测试时间解析"""
+    from unilabos.compile.utils.unit_parser import parse_time_input
+    assert parse_time_input(input) == expected
+
+
+# 异常测试
+def test_invalid_input_raises_error():
+    """测试无效输入抛出异常"""
+    with pytest.raises(ValueError) as exc_info:
+        invalid_function("bad_input")
+    assert "invalid" in str(exc_info.value).lower()
+
+
+# 跳过条件测试
+@pytest.mark.skipif(
+    not os.environ.get("ROS_DISTRO"),
+    reason="需要ROS环境"
+)
+def test_ros_feature():
+    """需要ROS环境的测试"""
+    pass
+```
+
+## 设备测试
+
+### 虚拟设备测试
+
+```python
+import pytest
+import asyncio
+from unittest.mock import MagicMock, AsyncMock
+
+from unilabos.devices.virtual.virtual_stirrer import VirtualStirrer
+
+
+class TestVirtualStirrer:
+    """VirtualStirrer 测试"""
+
+    @pytest.fixture
+    def stirrer(self):
+        """创建测试用搅拌器"""
+        device = VirtualStirrer(
+            device_id="test_stirrer",
+            config={"max_speed": 1500.0, "min_speed": 50.0}
+        )
+
+        # Mock ROS节点
+        mock_node = MagicMock()
+        mock_node.sleep = AsyncMock(return_value=None)
+        device.post_init(mock_node)
+
+        return device
+
+    @pytest.mark.asyncio
+    async def test_initialize(self, stirrer):
+        """测试初始化"""
+        result = await stirrer.initialize()
+        assert result is True
+        assert stirrer.status == "待机中"
+
+    @pytest.mark.asyncio
+    async def test_stir_action(self, stirrer):
+        """测试搅拌动作"""
+        await stirrer.initialize()
+
+        result = await stirrer.stir(
+            stir_time=5.0,
+            stir_speed=300.0,
+            settling_time=2.0
+        )
+
+        assert result is True
+        assert stirrer.operation_mode == "Completed"
+
+    @pytest.mark.asyncio
+    async def test_stir_invalid_speed(self, stirrer):
+        """测试无效速度"""
+        await stirrer.initialize()
+
+        # 速度超出范围
+        result = await stirrer.stir(
+            stir_time=5.0,
+            stir_speed=2000.0,  # 超过max_speed
+            settling_time=0.0
+        )
+
+        assert result is False
+        assert "错误" in stirrer.status
+```
+
+### 异步测试配置
+
+```python
+# conftest.py
+import pytest
+import asyncio
+
+
+@pytest.fixture(scope="session")
+def event_loop():
+    """创建事件循环"""
+    loop = asyncio.get_event_loop_policy().new_event_loop()
+    yield loop
+    loop.close()
+```
+
+## 资源测试
+
+```python
+import pytest
+from unilabos.resources.resource_tracker import (
+    ResourceTreeSet,
+    ResourceTreeInstance,
+)
+
+
+def test_resource_tree_creation():
+    """测试资源树创建"""
+    tree_set = ResourceTreeSet()
+
+    # 添加资源
+    resource = {"id": "res_1", "name": "Resource 1"}
+    tree_set.add_resource(resource)
+
+    # 验证
+    assert len(tree_set.all_nodes) == 1
+    assert tree_set.get_resource("res_1") is not None
+
+
+def test_resource_tree_merge():
+    """测试资源树合并"""
+    local_set = ResourceTreeSet()
+    remote_set = ResourceTreeSet()
+
+    # 设置数据...
+
+    local_set.merge_remote_resources(remote_set)
+
+    # 验证合并结果...
+```
+
+## ROS 消息测试
+
+```python
+import pytest
+from unilabos.ros.msgs.message_converter import (
+    convert_to_ros_msg,
+    convert_from_ros_msg_with_mapping,
+    msg_converter_manager,
+)
+
+
+def test_message_conversion():
+    """测试消息转换"""
+    # Python -> ROS
+    python_data = {"id": "test", "value": 42}
+    ros_msg = convert_to_ros_msg(python_data, MyMsgType)
+
+    assert ros_msg.id == "test"
+    assert ros_msg.value == 42
+
+    # ROS -> Python
+    result = convert_from_ros_msg_with_mapping(ros_msg, mapping)
+    assert result["id"] == "test"
+```
+
+## 协议测试
+
+```python
+import pytest
+import networkx as nx
+from unilabos.compile.stir_protocol import (
+    generate_stir_protocol,
+    extract_vessel_id,
+)
+
+
+@pytest.fixture
+def topology_graph():
+    """创建测试拓扑图"""
+    G = nx.DiGraph()
+    G.add_node("flask_1", **{"class": "flask"})
+    G.add_node("stirrer_1", **{"class": "virtual_stirrer"})
+    G.add_edge("stirrer_1", "flask_1")
+    return G
+
+
+def test_generate_stir_protocol(topology_graph):
+    """测试搅拌协议生成"""
+    actions = generate_stir_protocol(
+        G=topology_graph,
+        vessel="flask_1",
+        time="5 min",
+        stir_speed=300.0
+    )
+
+    assert len(actions) == 1
+    assert actions[0]["device_id"] == "stirrer_1"
+    assert actions[0]["action_name"] == "stir"
+
+
+def test_extract_vessel_id():
+    """测试vessel_id提取"""
+    # 字典格式
+    assert extract_vessel_id({"id": "flask_1"}) == "flask_1"
+
+    # 字符串格式
+    assert extract_vessel_id("flask_2") == "flask_2"
+
+    # 空值
+    assert extract_vessel_id("") == ""
+```
+
+## 测试标记
+
+```python
+# 慢速测试
+@pytest.mark.slow
+def test_long_running():
+    pass
+
+# 需要网络
+@pytest.mark.network
+def test_network_call():
+    pass
+
+# 需要ROS
+@pytest.mark.ros
+def test_ros_feature():
+    pass
+```
+
+运行特定标记的测试：
+
+```bash
+pytest -m "not slow"  # 排除慢速测试
+pytest -m ros         # 仅ROS测试
+```
+
+## 覆盖率
+
+```bash
+# 生成覆盖率报告
+pytest --cov=unilabos tests/
+
+# HTML报告
+pytest --cov=unilabos --cov-report=html tests/
+```
+
+## 最佳实践
+
+1. **测试命名**: `test_{功能}_{场景}_{预期结果}`
+2. **独立性**: 每个测试独立运行，不依赖其他测试
+3. **Mock外部依赖**: 使用 unittest.mock 模拟外部服务
+4. **参数化**: 使用 `@pytest.mark.parametrize` 减少重复代码
+5. **fixtures**: 使用 fixtures 共享测试设置
+6. **断言清晰**: 每个断言只验证一件事

.cursor/rules/unilabos-project.mdc

@@ -0,0 +1,353 @@
+---
+description: Uni-Lab-OS 实验室自动化平台开发规范 - 核心规则
+globs: ["**/*.py", "**/*.yaml", "**/*.json"]
+---
+
+# Uni-Lab-OS 项目开发规范
+
+## 项目概述
+
+Uni-Lab-OS 是一个实验室自动化操作系统，用于连接和控制各种实验设备，实现实验工作流的自动化和标准化。
+
+## 技术栈
+
+- **Python 3.11** - 核心开发语言
+- **ROS 2** - 设备通信中间件 (rclpy)
+- **Conda/Mamba** - 包管理 (robostack-staging, conda-forge)
+- **FastAPI** - Web API 服务
+- **WebSocket** - 实时通信
+- **NetworkX** - 拓扑图管理
+- **YAML** - 配置和注册表定义
+- **PyLabRobot** - 实验室自动化库集成
+- **pytest** - 测试框架
+- **asyncio** - 异步编程
+
+## 项目结构
+
+```
+unilabos/
+├── app/           # 应用入口、Web服务、后端
+├── compile/       # 协议编译器 (stir, add, filter 等)
+├── config/        # 配置管理
+├── devices/       # 设备驱动 (真实/虚拟)
+├── device_comms/  # 设备通信协议
+├── device_mesh/   # 3D网格和可视化
+├── registry/      # 设备和资源类型注册表 (YAML)
+├── resources/     # 资源定义
+├── ros/           # ROS 2 集成
+├── utils/         # 工具函数
+└── workflow/      # 工作流管理
+```
+
+## 代码规范
+
+### Python 风格
+
+1. **类型注解**：所有函数必须使用类型注解
+   ```python
+   def transfer_liquid(
+       source: str,
+       destination: str,
+       volume: float,
+       **kwargs
+   ) -> List[Dict[str, Any]]:
+   ```
+
+2. **Docstring**：使用 Google 风格的文档字符串
+   ```python
+   def initialize(self) -> bool:
+       """
+       初始化设备
+
+       Returns:
+           bool: 初始化是否成功
+       """
+   ```
+
+3. **导入顺序**：
+   - 标准库
+   - 第三方库
+   - ROS 相关 (rclpy, unilabos_msgs)
+   - 项目内部模块
+
+### 异步编程
+
+1. 设备操作方法使用 `async def`
+2. 使用 `await self._ros_node.sleep()` 而非 `asyncio.sleep()`
+3. 长时间运行操作需提供进度反馈
+
+```python
+async def stir(self, stir_time: float, stir_speed: float, **kwargs) -> bool:
+    """执行搅拌操作"""
+    start_time = time_module.time()
+    while True:
+        elapsed = time_module.time() - start_time
+        remaining = max(0, stir_time - elapsed)
+
+        self.data.update({
+            "remaining_time": remaining,
+            "status": f"搅拌中: {stir_speed} RPM"
+        })
+
+        if remaining <= 0:
+            break
+        await self._ros_node.sleep(1.0)
+    return True
+```
+
+### 日志规范
+
+使用项目自定义日志系统：
+
+```python
+from unilabos.utils.log import logger, info, debug, warning, error, trace
+
+# 在设备类中使用
+self.logger = logging.getLogger(f"DeviceName.{self.device_id}")
+self.logger.info("设备初始化完成")
+```
+
+## 设备驱动开发
+
+### 设备类结构
+
+```python
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+
+class MyDevice:
+    """设备驱动类"""
+
+    _ros_node: BaseROS2DeviceNode
+
+    def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
+        self.device_id = device_id or "unknown_device"
+        self.config = config or {}
+        self.data = {}  # 设备状态数据
+
+    def post_init(self, ros_node: BaseROS2DeviceNode):
+        """ROS节点注入"""
+        self._ros_node = ros_node
+
+    async def initialize(self) -> bool:
+        """初始化设备"""
+        pass
+
+    async def cleanup(self) -> bool:
+        """清理设备"""
+        pass
+
+    # 状态属性 - 自动发布为 ROS Topic
+    @property
+    def status(self) -> str:
+        return self.data.get("status", "待机")
+```
+
+### 状态属性装饰器
+
+```python
+from unilabos.utils.decorator import topic_config
+
+class MyDevice:
+    @property
+    @topic_config(period=1.0, qos=10)  # 每秒发布一次
+    def temperature(self) -> float:
+        return self._temperature
+```
+
+### 虚拟设备
+
+虚拟设备放置在 `unilabos/devices/virtual/` 目录下，命名为 `virtual_*.py`
+
+## 注册表配置
+
+### 设备注册表 (YAML)
+
+位置: `unilabos/registry/devices/*.yaml`
+
+```yaml
+my_device_type:
+  category:
+    - my_category
+  description: "设备描述"
+  version: "1.0.0"
+  class:
+    module: "unilabos.devices.my_device:MyDevice"
+    type: python
+    status_types:
+      status: String
+      temperature: Float64
+    action_value_mappings:
+      auto-initialize:
+        type: UniLabJsonCommandAsync
+        goal: {}
+        feedback: {}
+        result: {}
+        schema: {...}
+```
+
+### 资源注册表 (YAML)
+
+位置: `unilabos/registry/resources/**/*.yaml`
+
+```yaml
+my_container:
+  category:
+    - container
+  class:
+    module: "unilabos.resources.my_resource:MyContainer"
+    type: pylabrobot
+  version: "1.0.0"
+```
+
+## 协议编译器
+
+位置: `unilabos/compile/*_protocol.py`
+
+### 协议生成函数模板
+
+```python
+from typing import List, Dict, Any, Union
+import networkx as nx
+
+def generate_my_protocol(
+    G: nx.DiGraph,
+    vessel: Union[str, dict],
+    param1: float = 0.0,
+    **kwargs
+) -> List[Dict[str, Any]]:
+    """
+    生成操作协议序列
+
+    Args:
+        G: 物理拓扑图
+        vessel: 容器ID或字典
+        param1: 参数1
+
+    Returns:
+        List[Dict]: 动作序列
+    """
+    # 提取vessel_id
+    vessel_id = vessel if isinstance(vessel, str) else vessel.get("id", "")
+
+    # 查找设备
+    device_id = find_connected_device(G, vessel_id)
+
+    # 生成动作
+    action_sequence = [{
+        "device_id": device_id,
+        "action_name": "my_action",
+        "action_kwargs": {
+            "vessel": {"id": vessel_id},
+            "param1": float(param1)
+        }
+    }]
+
+    return action_sequence
+```
+
+## 测试规范
+
+### 测试文件位置
+
+- 单元测试: `tests/` 目录
+- 设备测试: `tests/devices/`
+- 资源测试: `tests/resources/`
+- ROS消息测试: `tests/ros/msgs/`
+
+### 测试命名
+
+```python
+# tests/devices/my_device/test_my_device.py
+
+import pytest
+
+def test_device_initialization():
+    """测试设备初始化"""
+    pass
+
+def test_device_action():
+    """测试设备动作"""
+    pass
+```
+
+## 错误处理
+
+```python
+from unilabos.utils.exception import UniLabException
+
+try:
+    result = await device.execute_action()
+except ValueError as e:
+    self.logger.error(f"参数错误: {e}")
+    self.data["status"] = "错误: 参数无效"
+    return False
+except Exception as e:
+    self.logger.error(f"执行失败: {e}")
+    raise
+```
+
+## 配置管理
+
+```python
+from unilabos.config.config import BasicConfig, HTTPConfig
+
+# 读取配置
+port = BasicConfig.port
+is_host = BasicConfig.is_host_mode
+
+# 配置文件: local_config.py
+```
+
+## 常用工具
+
+### 单例模式
+
+```python
+from unilabos.utils.decorator import singleton
+
+@singleton
+class MyManager:
+    pass
+```
+
+### 类型检查
+
+```python
+from unilabos.utils.type_check import NoAliasDumper
+
+yaml.dump(data, f, Dumper=NoAliasDumper)
+```
+
+### 导入管理
+
+```python
+from unilabos.utils.import_manager import get_class
+
+device_class = get_class("unilabos.devices.my_device:MyDevice")
+```
+
+## Git 提交规范
+
+提交信息格式:
+```
+<type>(<scope>): <subject>
+
+<body>
+```
+
+类型:
+- `feat`: 新功能
+- `fix`: 修复bug
+- `docs`: 文档更新
+- `refactor`: 重构
+- `test`: 测试相关
+- `chore`: 构建/工具相关
+
+示例:
+```
+feat(devices): 添加虚拟搅拌器设备
+
+- 实现VirtualStirrer类
+- 支持定时搅拌和持续搅拌模式
+- 添加速度验证逻辑
+```

.cursor/skills/add-device/SKILL.md

@@ -0,0 +1,24 @@
+---
+name: add-device
+description: Guide for adding new devices to Uni-Lab-OS (接入新设备). Walks through device category selection (thing model), communication protocol, command protocol collection, driver creation, registry YAML, and graph file setup. Use when the user wants to add/integrate a new device, create a device driver, write a device class, configure device registry, or mentions 接入设备/添加设备/设备驱动/物模型.
+---
+
+# 添加新设备到 Uni-Lab-OS
+
+**第一步：** 使用 Read 工具读取 `docs/ai_guides/add_device.md`，获取完整的设备接入指南并严格遵循。
+
+该指南包含：
+- 8 步完整流程（设备类别、通信协议、指令收集、接口对齐、驱动创建、注册表、图文件、验证）
+- 所有物模型代码模板（注射泵、电磁阀、蠕动泵、温控、电机等）
+- 通信协议代码片段（Serial、Modbus、TCP、HTTP、OPC UA）
+- 现有设备接口快照（用于第四步对齐，包含参数名、status_types、方法签名）
+- 常见错误检查清单
+
+**Cursor 工具映射：**
+
+| 指南中的操作 | Cursor 中使用的工具 |
+|---|---|
+| 向用户确认设备类别、协议等信息 | 使用 AskQuestion 工具 |
+| 搜索已有设备注册表 | 使用 Grep 在 `unilabos/registry/devices/` 中搜索 |
+| 读取用户提供的协议文档/SDK 代码 | 使用 Read 工具 |
+| 第四步对齐：查找同类设备接口 | 优先使用 Grep 搜索仓库中的最新注册表；指南中的「现有设备接口快照」作为兜底参考 |

.cursor/skills/add-protocol/SKILL.md

@@ -0,0 +1,323 @@
+---
+name: add-protocol
+description: Guide for adding new experiment protocols to Uni-Lab-OS (添加新实验操作协议). Walks through ROS Action definition, Pydantic model creation, protocol generator implementation, and registration. Use when the user wants to add a new protocol, create a compile function, implement an experiment operation, or mentions 协议/protocol/编译/compile/实验操作.
+---
+
+# 添加新实验操作协议（Protocol）
+
+Protocol 是对实验有意义的完整动作（如泵转移、过滤、溶解），需要多设备协同。`compile/` 中的生成函数根据设备连接图将抽象操作"编译"为设备指令序列。
+
+添加一个 Protocol 需修改 **6 个文件**，按以下流程执行。
+
+---
+
+## 第一步：确认协议信息
+
+向用户确认：
+
+| 信息 | 示例 |
+|------|------|
+| 协议英文名 | `MyNewProtocol` |
+| 操作描述 | 将固体样品研磨至目标粒径 |
+| Goal 参数（必需 + 可选） | `vessel: dict`, `time: float = 300.0` |
+| Result 字段 | `success: bool`, `message: str` |
+| 需要哪些设备协同 | 研磨器、搅拌器 |
+
+---
+
+## 第二步：创建 ROS Action 定义
+
+路径：`unilabos_msgs/action/<ActionName>.action`
+
+三段式结构（Goal / Result / Feedback），用 `---` 分隔：
+
+```
+# Goal
+Resource vessel
+float64 time
+string mode
+---
+# Result
+bool success
+string return_info
+---
+# Feedback
+string status
+string current_device
+builtin_interfaces/Duration time_spent
+builtin_interfaces/Duration time_remaining
+```
+
+**类型映射：**
+
+| Python 类型 | ROS 类型 | 说明 |
+|------------|----------|------|
+| `dict` | `Resource` | 容器/设备引用，自定义消息类型 |
+| `float` | `float64` | |
+| `int` | `int32` | |
+| `str` | `string` | |
+| `bool` | `bool` | |
+
+> `Resource` 是 `unilabos_msgs/msg/Resource.msg` 中定义的自定义消息类型。
+
+---
+
+## 第三步：注册 Action 到 CMakeLists
+
+在 `unilabos_msgs/CMakeLists.txt` 的 `set(action_files ...)` 块中添加：
+
+```cmake
+"action/MyNewAction.action"
+```
+
+> 调试时需编译：`cd unilabos_msgs && colcon build && source ./install/local_setup.sh && cd ..`
+> PR 合并后 CI/CD 自动发布，`mamba update ros-humble-unilabos-msgs` 即可。
+
+---
+
+## 第四步：创建 Pydantic 模型
+
+在 `unilabos/messages/__init__.py` 中添加（位于 `# Start Protocols` 和 `# End Protocols` 之间）：
+
+```python
+class MyNewProtocol(BaseModel):
+    # === 必需参数 ===
+    vessel: dict = Field(..., description="目标容器")
+    
+    # === 可选参数 ===
+    time: float = Field(300.0, description="操作时间 (秒)")
+    mode: str = Field("default", description="操作模式")
+    
+    def model_post_init(self, __context):
+        """参数验证和修正"""
+        if self.time <= 0:
+            self.time = 300.0
+```
+
+**规则：**
+- 参数名必须与 `.action` 文件中 Goal 字段完全一致
+- `dict` 类型对应 `.action` 中的 `Resource`
+- 将类名加入文件末尾的 `__all__` 列表
+
+---
+
+## 第五步：实现协议生成函数
+
+路径：`unilabos/compile/<protocol_name>_protocol.py`
+
+```python
+import networkx as nx
+from typing import List, Dict, Any
+
+
+def generate_my_new_protocol(
+    G: nx.DiGraph,
+    vessel: dict,
+    time: float = 300.0,
+    mode: str = "default",
+    **kwargs,
+) -> List[Dict[str, Any]]:
+    """将 MyNewProtocol 编译为设备动作序列。
+    
+    Args:
+        G: 设备连接图（NetworkX），节点为设备/容器，边为物理连接
+        vessel: 目标容器 {"id": "reactor_1"}
+        time: 操作时间（秒）
+        mode: 操作模式
+    
+    Returns:
+        动作列表，每个元素为:
+        - dict: 单步动作
+        - list[dict]: 并行动作
+    """
+    from unilabos.compile.utils.vessel_parser import get_vessel
+    
+    vessel_id, vessel_data = get_vessel(vessel)
+    actions = []
+    
+    # 查找相关设备（通过图的连接关系）
+    # 生成动作序列
+    actions.append({
+        "device_id": "target_device_id",
+        "action_name": "some_action",
+        "action_kwargs": {"param": "value"}
+    })
+    
+    # 等待
+    actions.append({
+        "action_name": "wait",
+        "action_kwargs": {"time": time}
+    })
+    
+    return actions
+```
+
+### 动作字典格式
+
+```python
+# 单步动作（发给子设备）
+{"device_id": "pump_1", "action_name": "set_position", "action_kwargs": {"position": 10.0}}
+
+# 发给工作站自身
+{"device_id": "self", "action_name": "my_action", "action_kwargs": {...}}
+
+# 等待
+{"action_name": "wait", "action_kwargs": {"time": 5.0}}
+
+# 并行动作（列表嵌套）
+[
+    {"device_id": "pump_1", "action_name": "set_position", "action_kwargs": {"position": 10.0}},
+    {"device_id": "stirrer_1", "action_name": "start_stir", "action_kwargs": {"stir_speed": 300}}
+]
+```
+
+### 关于 `vessel` 参数类型
+
+现有协议的 `vessel` 参数类型不统一：
+- 新协议趋势：使用 `dict`（如 `{"id": "reactor_1"}`）
+- 旧协议：使用 `str`（如 `"reactor_1"`）
+- 兼容写法：`Union[str, dict]`
+
+**建议新协议统一使用 `dict` 类型**，通过 `get_vessel()` 兼容两种输入。
+
+### 公共工具函数（`unilabos/compile/utils/`）
+
+| 函数 | 用途 |
+|------|------|
+| `get_vessel(vessel)` | 解析容器参数为 `(vessel_id, vessel_data)`，兼容 dict 和 str |
+| `find_solvent_vessel(G, solvent)` | 根据溶剂名查找容器（精确→命名规则→模糊→液体类型） |
+| `find_reagent_vessel(G, reagent)` | 根据试剂名查找容器（支持固体和液体） |
+| `find_connected_stirrer(G, vessel)` | 查找与容器相连的搅拌器 |
+| `find_solid_dispenser(G)` | 查找固体加样器 |
+
+### 协议内专属查找函数
+
+许多协议在自己的文件内定义了专属的 `find_*` 函数（不在 `utils/` 中）。编写新协议时，优先复用 `utils/` 中的公共函数；如需特殊查找逻辑，在协议文件内部定义即可：
+
+```python
+def find_my_special_device(G: nx.DiGraph, vessel: str) -> str:
+    """查找与容器相关的特殊设备"""
+    for node in G.nodes():
+        if 'my_device_type' in G.nodes[node].get('class', '').lower():
+            return node
+    raise ValueError("未找到特殊设备")
+```
+
+### 复用已有协议
+
+复杂协议通常组合已有协议：
+
+```python
+from unilabos.compile.pump_protocol import generate_pump_protocol_with_rinsing
+
+actions.extend(generate_pump_protocol_with_rinsing(
+    G, from_vessel=solvent_vessel, to_vessel=vessel, volume=volume
+))
+```
+
+### 图查询模式
+
+```python
+# 查找与容器相连的特定类型设备
+for neighbor in G.neighbors(vessel_id):
+    node_data = G.nodes[neighbor]
+    if "heater" in node_data.get("class", ""):
+        heater_id = neighbor
+        break
+
+# 查找最短路径（泵转移）
+path = nx.shortest_path(G, source=from_vessel_id, target=to_vessel_id)
+```
+
+---
+
+## 第六步：注册协议生成函数
+
+在 `unilabos/compile/__init__.py` 中：
+
+1. 顶部添加导入：
+
+```python
+from .my_new_protocol import generate_my_new_protocol
+```
+
+2. 在 `action_protocol_generators` 字典中添加映射：
+
+```python
+action_protocol_generators = {
+    # ... 已有协议
+    MyNewProtocol: generate_my_new_protocol,
+}
+```
+
+---
+
+## 第七步：配置图文件
+
+在工作站的图文件中，将协议名加入 `protocol_type`：
+
+```json
+{
+    "id": "my_station",
+    "class": "workstation",
+    "config": {
+        "protocol_type": ["PumpTransferProtocol", "MyNewProtocol"]
+    }
+}
+```
+
+---
+
+## 第八步：验证
+
+```bash
+# 1. 模块可导入
+python -c "from unilabos.messages import MyNewProtocol; print(MyNewProtocol.model_fields)"
+
+# 2. 生成函数可导入
+python -c "from unilabos.compile import action_protocol_generators; print(list(action_protocol_generators.keys()))"
+
+# 3. 启动测试（可选）
+unilab -g <graph>.json --complete_registry
+```
+
+---
+
+## 工作流清单
+
+```
+协议接入进度：
+- [ ] 1. 确认协议名、参数、涉及设备
+- [ ] 2. 创建 .action 文件 (unilabos_msgs/action/<Name>.action)
+- [ ] 3. 注册到 CMakeLists.txt
+- [ ] 4. 创建 Pydantic 模型 (unilabos/messages/__init__.py) + 更新 __all__
+- [ ] 5. 实现生成函数 (unilabos/compile/<name>_protocol.py)
+- [ ] 6. 注册到 compile/__init__.py
+- [ ] 7. 配置图文件 protocol_type
+- [ ] 8. 验证
+```
+
+---
+
+## 高级模式
+
+实现复杂协议时，详见 [reference.md](reference.md)：协议运行时数据流、mock graph 测试模式、单位解析工具（`unit_parser.py`）、复杂协议组合模式（以 dissolve 为例）。
+
+---
+
+## 现有协议速查
+
+| 协议 | Pydantic 类 | 生成函数 | 核心参数 |
+|------|-------------|---------|---------|
+| 泵转移 | `PumpTransferProtocol` | `generate_pump_protocol_with_rinsing` | `from_vessel, to_vessel, volume` |
+| 简单转移 | `TransferProtocol` | `generate_pump_protocol` | `from_vessel, to_vessel, volume` |
+| 加样 | `AddProtocol` | `generate_add_protocol` | `vessel, reagent, volume` |
+| 过滤 | `FilterProtocol` | `generate_filter_protocol` | `vessel, filtrate_vessel` |
+| 溶解 | `DissolveProtocol` | `generate_dissolve_protocol` | `vessel, solvent, volume` |
+| 加热/冷却 | `HeatChillProtocol` | `generate_heat_chill_protocol` | `vessel, temp, time` |
+| 搅拌 | `StirProtocol` | `generate_stir_protocol` | `vessel, time` |
+| 分离 | `SeparateProtocol` | `generate_separate_protocol` | `from_vessel, separation_vessel, solvent` |
+| 蒸发 | `EvaporateProtocol` | `generate_evaporate_protocol` | `vessel, pressure, temp, time` |
+| 清洗 | `CleanProtocol` | `generate_clean_protocol` | `vessel, solvent, volume` |
+| 离心 | `CentrifugeProtocol` | `generate_centrifuge_protocol` | `vessel, speed, time` |
+| 抽气充气 | `EvacuateAndRefillProtocol` | `generate_evacuateandrefill_protocol` | `vessel, gas` |

.cursor/skills/add-protocol/reference.md

@@ -0,0 +1,207 @@
+# 协议高级参考
+
+本文件是 SKILL.md 的补充，包含协议运行时数据流、测试模式、单位解析工具和复杂协议组合模式。Agent 在需要实现这些功能时按需阅读。
+
+---
+
+## 1. 协议运行时数据流
+
+从图文件到协议执行的完整链路：
+
+```
+实验图 JSON
+    ↓  graphio.read_node_link_json()
+physical_setup_graph (NetworkX DiGraph)
+    ↓  ROS2WorkstationNode._setup_protocol_names(protocol_type)
+为每个 protocol_name 创建 ActionServer
+    ↓  收到 Action Goal
+_create_protocol_execute_callback()
+    ↓  convert_from_ros_msg_with_mapping(goal, mapping)
+protocol_kwargs (Python dict)
+    ↓  向 Host 查询 Resource 类型参数的当前状态
+protocol_kwargs 更新（vessel 带上 children、data 等）
+    ↓  protocol_steps_generator(G=physical_setup_graph, **protocol_kwargs)
+List[Dict] 动作序列
+    ↓  逐步 execute_single_action / 并行 create_task
+子设备 ActionClient 执行
+```
+
+### `_setup_protocol_names` 核心逻辑
+
+```python
+def _setup_protocol_names(self, protocol_type):
+    if isinstance(protocol_type, str):
+        self.protocol_names = [p.strip() for p in protocol_type.split(",")]
+    else:
+        self.protocol_names = protocol_type
+    self.protocol_action_mappings = {}
+    for protocol_name in self.protocol_names:
+        protocol_type = globals()[protocol_name]  # 从 messages 模块取 Pydantic 类
+        self.protocol_action_mappings[protocol_name] = get_action_type(protocol_type)
+```
+
+### `_create_protocol_execute_callback` 关键步骤
+
+1. `convert_from_ros_msg_with_mapping(goal, action_value_mapping["goal"])` — ROS Goal → Python dict
+2. 对 `Resource` 类型字段，通过 `resource_get` Service 查询 Host 的最新资源状态
+3. `protocol_steps_generator(G=physical_setup_graph, **protocol_kwargs)` — 调用编译函数
+4. 遍历 steps：`dict` 串行执行，`list` 并行执行
+5. `execute_single_action` 通过 `_action_clients[device_id]` 向子设备发送 Action Goal
+6. 执行完毕后通过 `resource_update` Service 更新资源状态
+
+---
+
+## 2. 测试模式
+
+### 2.1 协议文件内测试函数
+
+许多协议文件末尾有 `test_*` 函数，主要测试参数解析工具：
+
+```python
+def test_dissolve_protocol():
+    """测试溶解协议的各种参数解析"""
+    volumes = ["10 mL", "?", 10.0, "1 L", "500 μL"]
+    for vol in volumes:
+        result = parse_volume_input(vol)
+        print(f"体积解析: {vol} → {result}mL")
+
+    masses = ["2.9 g", "?", 2.5, "500 mg"]
+    for mass in masses:
+        result = parse_mass_input(mass)
+        print(f"质量解析: {mass} → {result}g")
+```
+
+### 2.2 使用 mock graph 测试协议生成器
+
+推荐的端到端测试模式：
+
+```python
+import pytest
+import networkx as nx
+from unilabos.compile.stir_protocol import generate_stir_protocol
+
+
+@pytest.fixture
+def topology_graph():
+    """创建测试拓扑图"""
+    G = nx.DiGraph()
+    G.add_node("flask_1", **{"class": "flask", "type": "container"})
+    G.add_node("stirrer_1", **{"class": "virtual_stirrer", "type": "device"})
+    G.add_edge("stirrer_1", "flask_1")
+    return G
+
+
+def test_generate_stir_protocol(topology_graph):
+    """测试搅拌协议生成"""
+    actions = generate_stir_protocol(
+        G=topology_graph,
+        vessel="flask_1",
+        time="5 min",
+        stir_speed=300.0
+    )
+    assert len(actions) >= 1
+    assert actions[0]["device_id"] == "stirrer_1"
+```
+
+**要点：**
+- 用 `nx.DiGraph()` 构建最小拓扑
+- `add_node(id, **attrs)` 设置 `class`、`type`、`data` 等
+- `add_edge(src, dst)` 建立物理连接
+- 协议内的 `find_*` 函数依赖这些节点和边
+
+---
+
+## 3. 单位解析工具
+
+路径：`unilabos/compile/utils/unit_parser.py`
+
+| 函数 | 输入 | 返回 | 默认值 |
+|------|------|------|--------|
+| `parse_volume_input(input, default_unit)` | `"100 mL"`, `"2.5 L"`, `"500 μL"`, `10.0`, `"?"` | mL (float) | 50.0 |
+| `parse_mass_input(input)` | `"19.3 g"`, `"500 mg"`, `2.5`, `"?"` | g (float) | 1.0 |
+| `parse_time_input(input)` | `"30 min"`, `"1 h"`, `"300"`, `60.0`, `"?"` | 秒 (float) | 60.0 |
+
+支持的单位：
+
+- **体积**: mL, L, μL/uL, milliliter, liter, microliter
+- **质量**: g, mg, kg, gram, milligram, kilogram
+- **时间**: s/sec/second, min/minute, h/hr/hour, d/day
+
+特殊值 `"?"`、`"unknown"`、`"tbd"` 返回默认值。
+
+---
+
+## 4. 复杂协议组合模式
+
+以 `dissolve_protocol` 为例，展示如何组合多个子操作：
+
+### 整体流程
+
+```
+1. 解析参数 (parse_volume_input, parse_mass_input, parse_time_input)
+2. 设备发现 (find_connected_heatchill, find_connected_stirrer, find_solid_dispenser)
+3. 判断溶解类型 (液体 vs 固体)
+4. 组合动作序列:
+   a. heat_chill_start / start_stir  (启动加热/搅拌)
+   b. wait                           (等待温度稳定)
+   c. pump_protocol_with_rinsing     (液体转移, 通过 extend 拼接)
+      或 add_solid                   (固体加样)
+   d. heat_chill / stir / wait       (溶解等待)
+   e. heat_chill_stop                (停止加热)
+```
+
+### 关键代码模式
+
+**设备发现 → 条件组合：**
+
+```python
+heatchill_id = find_connected_heatchill(G, vessel_id)
+stirrer_id = find_connected_stirrer(G, vessel_id)
+solid_dispenser_id = find_solid_dispenser(G)
+
+actions = []
+
+# 启动阶段
+if heatchill_id and temp > 25.0:
+    actions.append({
+        "device_id": heatchill_id,
+        "action_name": "heat_chill_start",
+        "action_kwargs": {"vessel": {"id": vessel_id}, "temp": temp}
+    })
+    actions.append({"action_name": "wait", "action_kwargs": {"time": 30}})
+elif stirrer_id:
+    actions.append({
+        "device_id": stirrer_id,
+        "action_name": "start_stir",
+        "action_kwargs": {"vessel": {"id": vessel_id}, "stir_speed": stir_speed}
+    })
+
+# 转移阶段（复用已有协议）
+pump_actions = generate_pump_protocol_with_rinsing(
+    G=G, from_vessel=solvent_vessel, to_vessel=vessel_id, volume=volume
+)
+actions.extend(pump_actions)
+
+# 等待阶段
+if heatchill_id:
+    actions.append({
+        "device_id": heatchill_id,
+        "action_name": "heat_chill",
+        "action_kwargs": {"vessel": {"id": vessel_id}, "temp": temp, "time": time}
+    })
+else:
+    actions.append({"action_name": "wait", "action_kwargs": {"time": time}})
+```
+
+---
+
+## 5. 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| 协议执行回调 | `unilabos/ros/nodes/presets/workstation.py` |
+| ROS 消息映射 | `unilabos/ros/msgs/message_converter.py` |
+| 物理拓扑图 | `unilabos/resources/graphio.py` (`physical_setup_graph`) |
+| 单位解析 | `unilabos/compile/utils/unit_parser.py` |
+| 容器解析 | `unilabos/compile/utils/vessel_parser.py` |
+| 溶解协议（组合示例） | `unilabos/compile/dissolve_protocol.py` |

.cursor/skills/add-resource/SKILL.md

@@ -0,0 +1,371 @@
+---
+name: add-resource
+description: Guide for adding new resources (materials, bottles, carriers, decks, warehouses) to Uni-Lab-OS (添加新物料/资源). Covers Bottle, Carrier, Deck, WareHouse definitions and registry YAML. Use when the user wants to add resources, define materials, create a deck layout, add bottles/carriers/plates, or mentions 物料/资源/resource/bottle/carrier/deck/plate/warehouse.
+---
+
+# 添加新物料资源
+
+Uni-Lab-OS 的资源体系基于 PyLabRobot，通过扩展实现 Bottle、Carrier、WareHouse、Deck 等实验室物料管理。
+
+---
+
+## 第一步：确认资源类型
+
+向用户确认需要添加的资源类型：
+
+| 类型 | 基类 | 用途 | 示例 |
+|------|------|------|------|
+| **Bottle** | `Well` (PyLabRobot) | 单个容器（瓶、小瓶、烧杯、反应器） | 试剂瓶、粉末瓶 |
+| **BottleCarrier** | `ItemizedCarrier` | 多槽位载架（放多个 Bottle） | 6 位试剂架、枪头盒 |
+| **WareHouse** | `ItemizedCarrier` | 堆栈/仓库（放多个 Carrier） | 4x4 堆栈 |
+| **Deck** | `Deck` (PyLabRobot) | 工作站台面（放多个 WareHouse） | 反应站 Deck |
+
+**层级关系：** `Deck` → `WareHouse` → `BottleCarrier` → `Bottle`
+
+还需确认：
+- 资源所属的项目/场景（如 bioyond、battery、通用）
+- 尺寸参数（直径、高度、最大容积等）
+- 布局参数（行列数、间距等）
+
+---
+
+## 第二步：创建资源定义
+
+### 文件位置
+
+```
+unilabos/resources/
+├── <project>/          # 按项目分组
+│   ├── bottles.py      # Bottle 工厂函数
+│   ├── bottle_carriers.py  # Carrier 工厂函数
+│   ├── warehouses.py   # WareHouse 工厂函数
+│   └── decks.py        # Deck 类定义
+├── itemized_carrier.py # Bottle, BottleCarrier, ItemizedCarrier 基类
+├── warehouse.py        # WareHouse 基类
+└── container.py        # 通用容器
+```
+
+### 2A. 添加 Bottle（工厂函数）
+
+```python
+from unilabos.resources.itemized_carrier import Bottle
+
+
+def My_Reagent_Bottle(
+    name: str,
+    diameter: float = 70.0,     # 瓶体直径 (mm)
+    height: float = 120.0,      # 瓶体高度 (mm)
+    max_volume: float = 500000.0,  # 最大容积 (μL)
+    barcode: str = None,
+) -> Bottle:
+    """创建试剂瓶"""
+    return Bottle(
+        name=name,
+        diameter=diameter,
+        height=height,
+        max_volume=max_volume,
+        barcode=barcode,
+        model="My_Reagent_Bottle",  # 唯一标识，用于注册表和物料映射
+    )
+```
+
+**Bottle 参数：**
+- `name`: 实例名称（运行时唯一）
+- `diameter`: 瓶体直径 (mm)
+- `height`: 瓶体高度 (mm)
+- `max_volume`: 最大容积 (**μL**，注意单位！500mL = 500000)
+- `barcode`: 条形码（可选）
+- `model`: 模型标识，与注册表 key 一致
+
+### 2B. 添加 BottleCarrier（工厂函数）
+
+```python
+from pylabrobot.resources import ResourceHolder
+from pylabrobot.resources.carrier import create_ordered_items_2d
+
+from unilabos.resources.itemized_carrier import BottleCarrier
+
+
+def My_6SlotCarrier(name: str) -> BottleCarrier:
+    """创建 3x2 六槽位载架"""
+    sites = create_ordered_items_2d(
+        klass=ResourceHolder,
+        num_items_x=3,       # 列数
+        num_items_y=2,       # 行数
+        dx=10.0,             # X 起始偏移
+        dy=10.0,             # Y 起始偏移
+        dz=5.0,              # Z 偏移
+        item_dx=42.0,        # X 间距
+        item_dy=35.0,        # Y 间距
+        size_x=20.0,         # 槽位宽
+        size_y=20.0,         # 槽位深
+        size_z=50.0,         # 槽位高
+    )
+    carrier = BottleCarrier(
+        name=name,
+        size_x=146.0,        # 载架总宽
+        size_y=80.0,         # 载架总深
+        size_z=55.0,         # 载架总高
+        sites=sites,
+        model="My_6SlotCarrier",
+    )
+    carrier.num_items_x = 3
+    carrier.num_items_y = 2
+    carrier.num_items_z = 1
+
+    # 预装 Bottle（可选）
+    ordering = ["A01", "A02", "A03", "B01", "B02", "B03"]
+    for i in range(6):
+        carrier[i] = My_Reagent_Bottle(f"{ordering[i]}")
+
+    return carrier
+```
+
+### 2C. 添加 WareHouse（工厂函数）
+
+```python
+from unilabos.resources.warehouse import warehouse_factory
+
+
+def my_warehouse_4x4(name: str) -> "WareHouse":
+    """创建 4行x4列 堆栈仓库"""
+    return warehouse_factory(
+        name=name,
+        num_items_x=4,            # 列数
+        num_items_y=4,            # 行数
+        num_items_z=1,            # 层数（通常为 1）
+        dx=137.0,                 # X 起始偏移
+        dy=96.0,                  # Y 起始偏移
+        dz=120.0,                 # Z 起始偏移
+        item_dx=137.0,            # X 间距
+        item_dy=125.0,            # Y 间距
+        item_dz=10.0,             # Z 间距（多层时用）
+        resource_size_x=127.0,    # 槽位宽
+        resource_size_y=85.0,     # 槽位深
+        resource_size_z=100.0,    # 槽位高
+        model="my_warehouse_4x4",
+    )
+```
+
+**`warehouse_factory` 参数说明：**
+
+| 参数 | 说明 |
+|------|------|
+| `num_items_x/y/z` | 列数/行数/层数 |
+| `dx, dy, dz` | 第一个槽位的起始坐标偏移 |
+| `item_dx, item_dy, item_dz` | 相邻槽位间距 |
+| `resource_size_x/y/z` | 单个槽位的物理尺寸 |
+| `col_offset` | 列命名偏移（如设 4 则从 A05 开始） |
+| `row_offset` | 行命名偏移（如设 5 则从 F 行开始） |
+| `layout` | 排序方式：`"col-major"`（列优先，默认）/ `"row-major"`（行优先） |
+| `removed_positions` | 要移除的位置索引列表 |
+
+自动生成 `ResourceHolder` 槽位，命名规则为 `A01, B01, C01, D01, A02, ...`（列优先）或 `A01, A02, A03, A04, B01, ...`（行优先）。
+
+### 2D. 添加 Deck（类定义）
+
+```python
+from pylabrobot.resources import Deck, Coordinate
+
+
+class MyStation_Deck(Deck):
+    def __init__(
+        self,
+        name: str = "MyStation_Deck",
+        size_x: float = 2700.0,
+        size_y: float = 1080.0,
+        size_z: float = 1500.0,
+        category: str = "deck",
+        setup: bool = False,
+    ) -> None:
+        super().__init__(name=name, size_x=size_x, size_y=size_y, size_z=size_z)
+        if setup:
+            self.setup()
+
+    def setup(self) -> None:
+        self.warehouses = {
+            "仓库A": my_warehouse_4x4("仓库A"),
+            "仓库B": my_warehouse_4x4("仓库B"),
+        }
+        self.warehouse_locations = {
+            "仓库A": Coordinate(-200.0, 400.0, 0.0),
+            "仓库B": Coordinate(2350.0, 400.0, 0.0),
+        }
+        for wh_name, wh in self.warehouses.items():
+            self.assign_child_resource(wh, location=self.warehouse_locations[wh_name])
+```
+
+**Deck 要点：**
+- 继承 `pylabrobot.resources.Deck`
+- `setup()` 创建 WareHouse 并通过 `assign_child_resource` 放置到指定坐标
+- `setup` 参数控制是否在构造时自动调用 `setup()`（图文件中通过 `config.setup: true` 触发）
+
+---
+
+## 第三步：创建注册表 YAML
+
+路径：`unilabos/registry/resources/<project>/<type>.yaml`
+
+### Bottle 注册
+
+```yaml
+My_Reagent_Bottle:
+  category:
+  - bottles
+  class:
+    module: unilabos.resources.my_project.bottles:My_Reagent_Bottle
+    type: pylabrobot
+  description: 我的试剂瓶
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  version: 1.0.0
+```
+
+### Carrier 注册
+
+```yaml
+My_6SlotCarrier:
+  category:
+  - bottle_carriers
+  class:
+    module: unilabos.resources.my_project.bottle_carriers:My_6SlotCarrier
+    type: pylabrobot
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  version: 1.0.0
+```
+
+### Deck 注册
+
+```yaml
+MyStation_Deck:
+  category:
+  - deck
+  class:
+    module: unilabos.resources.my_project.decks:MyStation_Deck
+    type: pylabrobot
+  description: 我的工作站 Deck
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  registry_type: resource
+  version: 1.0.0
+```
+
+**注册表规则：**
+- `class.module` 格式为 `python.module.path:ClassName_or_FunctionName`
+- `class.type` 固定为 `pylabrobot`
+- Key（如 `My_Reagent_Bottle`）必须与工厂函数名 / 类名一致
+- `category` 按类型标注（`bottles`, `bottle_carriers`, `deck` 等）
+
+---
+
+## 第四步：在图文件中引用
+
+### Deck 在工作站中的引用
+
+工作站节点通过 `deck` 字段引用，Deck 作为子节点：
+
+```json
+{
+    "id": "my_station",
+    "children": ["my_deck"],
+    "deck": {
+        "data": {
+            "_resource_child_name": "my_deck",
+            "_resource_type": "unilabos.resources.my_project.decks:MyStation_Deck"
+        }
+    }
+},
+{
+    "id": "my_deck",
+    "parent": "my_station",
+    "type": "deck",
+    "class": "MyStation_Deck",
+    "config": {"type": "MyStation_Deck", "setup": true}
+}
+```
+
+### 物料类型映射（外部系统对接时）
+
+如果工作站需要与外部系统同步物料，在 config 中配置 `material_type_mappings`：
+
+```json
+"material_type_mappings": {
+    "My_Reagent_Bottle": ["试剂瓶", "external-type-uuid"],
+    "My_6SlotCarrier": ["六槽载架", "external-type-uuid"]
+}
+```
+
+---
+
+## 第五步：注册 PLR 扩展（如需要）
+
+如果添加了新的 Deck 类，需要在 `unilabos/resources/plr_additional_res_reg.py` 中导入，使 `find_subclass` 能发现它：
+
+```python
+def register():
+    from unilabos.resources.my_project.decks import MyStation_Deck
+```
+
+---
+
+## 第六步：验证
+
+```bash
+# 1. 资源可导入
+python -c "from unilabos.resources.my_project.bottles import My_Reagent_Bottle; print(My_Reagent_Bottle('test'))"
+
+# 2. Deck 可创建
+python -c "
+from unilabos.resources.my_project.decks import MyStation_Deck
+d = MyStation_Deck('test', setup=True)
+print(d.children)
+"
+
+# 3. 启动测试
+unilab -g <graph>.json --complete_registry
+```
+
+---
+
+## 工作流清单
+
+```
+资源接入进度：
+- [ ] 1. 确定资源类型（Bottle / Carrier / WareHouse / Deck）
+- [ ] 2. 创建资源定义（工厂函数/类）
+- [ ] 3. 创建注册表 YAML (unilabos/registry/resources/<project>/<type>.yaml)
+- [ ] 4. 在图文件中引用（如需要）
+- [ ] 5. 注册 PLR 扩展（Deck 类需要）
+- [ ] 6. 验证
+```
+
+---
+
+## 高级模式
+
+实现复杂资源系统时，详见 [reference.md](reference.md)：类继承体系完整图、序列化/反序列化流程、Bioyond 物料双向同步、非瓶类资源（ElectrodeSheet / Magazine）、仓库工厂 layout 模式。
+
+---
+
+## 现有资源参考
+
+| 项目 | Bottles | Carriers | WareHouses | Decks |
+|------|---------|----------|------------|-------|
+| bioyond | `bioyond/bottles.py` | `bioyond/bottle_carriers.py` | `bioyond/warehouses.py`, `YB_warehouses.py` | `bioyond/decks.py` |
+| battery | — | `battery/bottle_carriers.py` | — | — |
+| 通用 | — | — | `warehouse.py` | — |
+
+### 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| Bottle/Carrier 基类 | `unilabos/resources/itemized_carrier.py` |
+| WareHouse 基类 + 工厂 | `unilabos/resources/warehouse.py` |
+| PLR 注册 | `unilabos/resources/plr_additional_res_reg.py` |
+| 资源注册表 | `unilabos/registry/resources/` |
+| 图文件加载 | `unilabos/resources/graphio.py` |
+| 资源跟踪器 | `unilabos/resources/resource_tracker.py` |

.cursor/skills/add-resource/reference.md

@@ -0,0 +1,292 @@
+# 资源高级参考
+
+本文件是 SKILL.md 的补充，包含类继承体系、序列化/反序列化、Bioyond 物料同步、非瓶类资源和仓库工厂模式。Agent 在需要实现这些功能时按需阅读。
+
+---
+
+## 1. 类继承体系
+
+```
+PyLabRobot
+├── Resource (PLR 基类)
+│   ├── Well
+│   │   └── Bottle (unilabos)        → 瓶/小瓶/烧杯/反应器
+│   ├── Deck
+│   │   └── 自定义 Deck 类 (unilabos) → 工作站台面
+│   ├── ResourceHolder               → 槽位占位符
+│   └── Container
+│       └── Battery (unilabos)       → 组装好的电池
+│
+├── ItemizedCarrier (unilabos, 继承 Resource)
+│   ├── BottleCarrier (unilabos)     → 瓶载架
+│   └── WareHouse (unilabos)         → 堆栈仓库
+│
+├── ItemizedResource (PLR)
+│   └── MagazineHolder (unilabos)    → 子弹夹载架
+│
+└── ResourceStack (PLR)
+    └── Magazine (unilabos)          → 子弹夹洞位
+```
+
+### Bottle 类细节
+
+```python
+class Bottle(Well):
+    def __init__(self, name, diameter, height, max_volume,
+                 size_x=0.0, size_y=0.0, size_z=0.0,
+                 barcode=None, category="container", model=None, **kwargs):
+        super().__init__(
+            name=name,
+            size_x=diameter,    # PLR 用 diameter 作为 size_x/size_y
+            size_y=diameter,
+            size_z=height,      # PLR 用 height 作为 size_z
+            max_volume=max_volume,
+            category=category,
+            model=model,
+            bottom_type="flat",
+            cross_section_type="circle"
+        )
+```
+
+注意 `size_x = size_y = diameter`，`size_z = height`。
+
+### ItemizedCarrier 核心方法
+
+| 方法 | 说明 |
+|------|------|
+| `__getitem__(identifier)` | 通过索引或 Excel 标识（如 `"A01"`）访问槽位 |
+| `__setitem__(identifier, resource)` | 向槽位放入资源 |
+| `get_child_identifier(child)` | 获取子资源的标识符 |
+| `capacity` | 总槽位数 |
+| `sites` | 所有槽位字典 |
+
+---
+
+## 2. 序列化与反序列化
+
+### PLR ↔ UniLab 转换
+
+| 函数 | 位置 | 方向 |
+|------|------|------|
+| `ResourceTreeSet.from_plr_resources(resources)` | `resource_tracker.py` | PLR → UniLab |
+| `ResourceTreeSet.to_plr_resources()` | `resource_tracker.py` | UniLab → PLR |
+
+### `from_plr_resources` 流程
+
+```
+PLR Resource
+    ↓ build_uuid_mapping (递归生成 UUID)
+    ↓ resource.serialize() → dict
+    ↓ resource.serialize_all_state() → states
+    ↓ resource_plr_inner (递归构建 ResourceDictInstance)
+ResourceTreeSet
+```
+
+关键：每个 PLR 资源通过 `unilabos_uuid` 属性携带 UUID，`unilabos_extra` 携带扩展数据（如 `class` 名）。
+
+### `to_plr_resources` 流程
+
+```
+ResourceTreeSet
+    ↓ collect_node_data (收集 UUID、状态、扩展数据)
+    ↓ node_to_plr_dict (转为 PLR 字典格式)
+    ↓ find_subclass(type_name, PLRResource) (查找 PLR 子类)
+    ↓ sub_cls.deserialize(plr_dict) (反序列化)
+    ↓ loop_set_uuid, loop_set_extra (递归设置 UUID 和扩展)
+PLR Resource
+```
+
+### Bottle 序列化
+
+```python
+class Bottle(Well):
+    def serialize(self) -> dict:
+        data = super().serialize()
+        return {**data, "diameter": self.diameter, "height": self.height}
+
+    @classmethod
+    def deserialize(cls, data: dict, allow_marshal=False):
+        barcode_data = data.pop("barcode", None)
+        instance = super().deserialize(data, allow_marshal=allow_marshal)
+        if barcode_data and isinstance(barcode_data, str):
+            instance.barcode = barcode_data
+        return instance
+```
+
+---
+
+## 3. Bioyond 物料同步
+
+### 双向转换函数
+
+| 函数 | 位置 | 方向 |
+|------|------|------|
+| `resource_bioyond_to_plr(materials, type_mapping, deck)` | `graphio.py` | Bioyond → PLR |
+| `resource_plr_to_bioyond(resources, type_mapping, warehouse_mapping)` | `graphio.py` | PLR → Bioyond |
+
+### `resource_bioyond_to_plr` 流程
+
+```
+Bioyond 物料列表
+    ↓ reverse_type_mapping: {typeName → (model, UUID)}
+    ↓ 对每个物料:
+       typeName → 查映射 → model (如 "BIOYOND_PolymerStation_Reactor")
+       initialize_resource({"name": unique_name, "class": model})
+    ↓ 设置 unilabos_extra (material_bioyond_id, material_bioyond_name 等)
+    ↓ 处理 detail (子物料/坐标)
+    ↓ 按 locationName 放入 deck.warehouses 对应槽位
+PLR 资源列表
+```
+
+### `resource_plr_to_bioyond` 流程
+
+```
+PLR 资源列表
+    ↓ 遍历每个资源:
+       载架(capacity > 1): 生成 details 子物料 + 坐标
+       单瓶: 直接映射
+    ↓ type_mapping 查找 typeId
+    ↓ warehouse_mapping 查找位置 UUID
+    ↓ 组装 Bioyond 格式 (name, typeName, typeId, quantity, Parameters, locations)
+Bioyond 物料列表
+```
+
+### BioyondResourceSynchronizer
+
+工作站通过 `ResourceSynchronizer` 自动同步物料：
+
+```python
+class BioyondResourceSynchronizer(ResourceSynchronizer):
+    def sync_from_external(self) -> bool:
+        all_data = []
+        all_data.extend(api_client.stock_material('{"typeMode": 0}'))  # 耗材
+        all_data.extend(api_client.stock_material('{"typeMode": 1}'))  # 样品
+        all_data.extend(api_client.stock_material('{"typeMode": 2}'))  # 试剂
+        unilab_resources = resource_bioyond_to_plr(
+            all_data,
+            type_mapping=self.workstation.bioyond_config["material_type_mappings"],
+            deck=self.workstation.deck
+        )
+        # 更新 deck 上的资源
+```
+
+---
+
+## 4. 非瓶类资源
+
+### ElectrodeSheet（极片）
+
+路径：`unilabos/resources/battery/electrode_sheet.py`
+
+```python
+class ElectrodeSheet(ResourcePLR):
+    """片状材料（极片、隔膜、弹片、垫片等）"""
+    _unilabos_state = {
+        "diameter": 0.0,
+        "thickness": 0.0,
+        "mass": 0.0,
+        "material_type": "",
+        "color": "",
+        "info": "",
+    }
+```
+
+工厂函数：`PositiveCan`, `PositiveElectrode`, `NegativeCan`, `NegativeElectrode`, `SpringWasher`, `FlatWasher`, `AluminumFoil`
+
+### Battery（电池）
+
+```python
+class Battery(Container):
+    """组装好的电池"""
+    _unilabos_state = {
+        "color": "",
+        "electrolyte_name": "",
+        "open_circuit_voltage": 0.0,
+    }
+```
+
+### Magazine / MagazineHolder（子弹夹）
+
+```python
+class Magazine(ResourceStack):
+    """子弹夹洞位，可堆叠 ElectrodeSheet"""
+    # direction, max_sheets
+
+class MagazineHolder(ItemizedResource):
+    """多洞位子弹夹"""
+    # hole_diameter, hole_depth, max_sheets_per_hole
+```
+
+工厂函数 `magazine_factory()` 用 `create_homogeneous_resources` 生成洞位，可选预填 `ElectrodeSheet` 或 `Battery`。
+
+---
+
+## 5. 仓库工厂模式参考
+
+### 实际 warehouse 工厂函数示例
+
+```python
+# 行优先 4x4 仓库
+def bioyond_warehouse_1x4x4(name: str) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=4, num_items_y=4, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=147.0, item_dy=106.0, item_dz=130.0,
+        layout="row-major",  # A01,A02,A03,A04, B01,...
+    )
+
+# 右侧 4x4 仓库（列名偏移）
+def bioyond_warehouse_1x4x4_right(name: str) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=4, num_items_y=4, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=147.0, item_dy=106.0, item_dz=130.0,
+        col_offset=4,      # A05,A06,A07,A08
+        layout="row-major",
+    )
+
+# 竖向仓库（站内试剂存放）
+def bioyond_warehouse_reagent_storage(name: str) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=1, num_items_y=2, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=147.0, item_dy=106.0, item_dz=130.0,
+        layout="vertical-col-major",
+    )
+
+# 行偏移（F 行开始）
+def bioyond_warehouse_5x3x1(name: str, row_offset: int = 0) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=3, num_items_y=5, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=159.0, item_dy=183.0, item_dz=130.0,
+        row_offset=row_offset,  # 0→A行起，5→F行起
+        layout="row-major",
+    )
+```
+
+### layout 类型说明
+
+| layout | 命名顺序 | 适用场景 |
+|--------|---------|---------|
+| `col-major` (默认) | A01,B01,C01,D01, A02,B02,... | 列优先，标准堆栈 |
+| `row-major` | A01,A02,A03,A04, B01,B02,... | 行优先，Bioyond 前端展示 |
+| `vertical-col-major` | 竖向排列，标签从底部开始 | 竖向仓库（试剂存放、测密度） |
+
+---
+
+## 6. 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| Bottle/Carrier 基类 | `unilabos/resources/itemized_carrier.py` |
+| WareHouse 类 + 工厂 | `unilabos/resources/warehouse.py` |
+| ResourceTreeSet 转换 | `unilabos/resources/resource_tracker.py` |
+| Bioyond 物料转换 | `unilabos/resources/graphio.py` |
+| Bioyond 仓库定义 | `unilabos/resources/bioyond/warehouses.py` |
+| 电池资源 | `unilabos/resources/battery/` |
+| PLR 注册 | `unilabos/resources/plr_additional_res_reg.py` |

.cursor/skills/add-workstation/SKILL.md

@@ -0,0 +1,500 @@
+---
+name: add-workstation
+description: Guide for adding new workstations to Uni-Lab-OS (接入新工作站). Walks through workstation type selection, sub-device composition, external system integration, driver creation, registry YAML, deck setup, and graph file configuration. Use when the user wants to add/integrate a new workstation, create a workstation driver, configure a station with sub-devices, set up deck and materials, or mentions 工作站/工站/station/workstation.
+---
+
+# Uni-Lab-OS 工作站接入指南
+
+工作站（workstation）是组合多个子设备的大型设备，拥有独立的物料管理系统（PLR Deck）和工作流引擎。本指南覆盖从需求分析到验证的全流程。
+
+> **前置知识**：工作站接入基于 `docs/ai_guides/add_device.md` 的通用设备接入框架，但有显著差异。阅读本指南前无需先读通用指南。
+
+## 第一步：确定工作站类型
+
+向用户确认以下信息：
+
+**Q1: 工作站的业务场景？**
+
+| 类型 | 基类 | 适用场景 | 示例 |
+|------|------|----------|------|
+| **Protocol 工作站** | `ProtocolNode` | 标准化学操作协议（过滤、转移、加热等） | FilterProtocolStation |
+| **外部系统工作站** | `WorkstationBase` | 与外部 LIMS/MES 系统对接，有专属 API | BioyondStation |
+| **硬件控制工作站** | `WorkstationBase` | 直接控制 PLC/硬件，无外部系统 | CoinCellAssembly |
+
+**Q2: 工作站英文名称？**（如 `my_reaction_station`）
+
+**Q3: 与外部系统的交互方式？**
+
+| 方式 | 适用场景 | 需要的配置 |
+|------|----------|-----------|
+| 无外部系统 | Protocol 工作站、纯硬件控制 | 无 |
+| HTTP API | LIMS/MES 系统（如 Bioyond） | `api_host`, `api_key` |
+| Modbus TCP | PLC 控制 | `address`, `port` |
+| OPC UA | 工业设备 | `url` |
+
+**Q4: 子设备组成？**
+- 列出所有子设备（如反应器、泵、阀、传感器等）
+- 哪些是已有设备类型？哪些需要新增？
+- 子设备之间的硬件代理关系（如泵通过串口设备通信）
+
+**Q5: 物料管理需求？**
+- 是否需要 Deck（物料面板）？
+- 物料类型（plate、tip_rack、bottle 等）
+- 是否需要与外部物料系统同步？
+
+---
+
+## 第二步：理解工作站架构
+
+工作站与普通设备的核心差异：
+
+| 维度 | 普通设备 | 工作站 |
+|------|---------|--------|
+| 基类 | 无（纯 Python 类） | `WorkstationBase` 或 `ProtocolNode` |
+| ROS 节点 | `BaseROS2DeviceNode` | `ROS2WorkstationNode` |
+| 状态管理 | `self.data` 字典 | 通常不用 `self.data`，用 `@property` 直接访问 |
+| 子设备 | 无 | `children` 列表，通过 `self._children` 访问 |
+| 物料 | 无 | `self.deck`（PLR Deck） |
+| 图文件角色 | `parent: null` 或 `parent: "<station>"` | `parent: null`，含 `children` 和 `deck` |
+
+### 继承体系
+
+`WorkstationBase` (ABC) → `ProtocolNode` (通用协议) / `BioyondWorkstation` (→ ReactionStation, DispensingStation) / `CoinCellAssemblyWorkstation` (硬件控制)
+
+### ROS 层
+
+`ROS2WorkstationNode` 额外负责：初始化 children 子设备节点、为子设备创建 ActionClient、配置硬件代理、为 protocol_type 创建协议 ActionServer。
+
+---
+
+## 第三步：创建驱动文件
+
+文件路径：`unilabos/devices/workstation/<station_name>/<station_name>.py`
+
+### 模板 A：基于外部系统的工作站
+
+适用于与 LIMS/MES 等外部系统对接的场景。
+
+```python
+import logging
+from typing import Dict, Any, Optional, List
+from pylabrobot.resources import Deck
+
+from unilabos.devices.workstation.workstation_base import WorkstationBase
+
+try:
+    from unilabos.ros.nodes.presets.workstation import ROS2WorkstationNode
+except ImportError:
+    ROS2WorkstationNode = None
+
+
+class MyWorkstation(WorkstationBase):
+    """工作站描述"""
+
+    _ros_node: "ROS2WorkstationNode"
+
+    def __init__(
+        self,
+        config: dict = None,
+        deck: Optional[Deck] = None,
+        protocol_type: list = None,
+        **kwargs,
+    ):
+        super().__init__(deck=deck, **kwargs)
+        self.config = config or {}
+        self.logger = logging.getLogger(f"MyWorkstation")
+
+        # 外部系统连接配置
+        self.api_host = self.config.get("api_host", "")
+        self.api_key = self.config.get("api_key", "")
+
+        # 工作站业务状态（不同于 self.data 模式）
+        self._status = "Idle"
+
+    def post_init(self, ros_node: "ROS2WorkstationNode") -> None:
+        super().post_init(ros_node)
+        # 在这里启动后台服务、连接监控等
+
+    # ============ 子设备访问 ============
+
+    def _get_child_device(self, device_id: str):
+        """通过 ID 获取子设备节点"""
+        return self._children.get(device_id)
+
+    # ============ 动作方法 ============
+
+    async def scheduler_start(self, **kwargs) -> Dict[str, Any]:
+        """启动调度器"""
+        return {"success": True}
+
+    async def create_order(self, json_str: str, **kwargs) -> Dict[str, Any]:
+        """创建工单"""
+        return {"success": True}
+
+    # ============ 属性 ============
+
+    @property
+    def workflow_sequence(self) -> str:
+        return "[]"
+
+    @property
+    def material_info(self) -> str:
+        return "{}"
+```
+
+### 模板 B：基于硬件控制的工作站
+
+适用于直接与 PLC/硬件通信的场景。
+
+```python
+import logging
+from typing import Dict, Any, Optional
+from pylabrobot.resources import Deck
+
+from unilabos.devices.workstation.workstation_base import WorkstationBase
+
+try:
+    from unilabos.ros.nodes.presets.workstation import ROS2WorkstationNode
+except ImportError:
+    ROS2WorkstationNode = None
+
+
+class MyHardwareWorkstation(WorkstationBase):
+    """硬件控制工作站"""
+
+    _ros_node: "ROS2WorkstationNode"
+
+    def __init__(
+        self,
+        config: dict = None,
+        deck: Optional[Deck] = None,
+        address: str = "192.168.1.100",
+        port: str = "502",
+        debug_mode: bool = False,
+        *args,
+        **kwargs,
+    ):
+        super().__init__(deck=deck, *args, **kwargs)
+        self.config = config or {}
+        self.address = address
+        self.port = int(port)
+        self.debug_mode = debug_mode
+        self.logger = logging.getLogger("MyHardwareWorkstation")
+
+        # 初始化通信客户端
+        if not debug_mode:
+            from unilabos.device_comms.modbus_plc.client import ModbusTcpClient
+            self.client = ModbusTcpClient(host=self.address, port=self.port)
+        else:
+            self.client = None
+
+    def post_init(self, ros_node: "ROS2WorkstationNode") -> None:
+        super().post_init(ros_node)
+
+    # ============ 硬件读写 ============
+
+    def _read_register(self, name: str):
+        """读取 Modbus 寄存器"""
+        if self.debug_mode:
+            return 0
+        # 实际读取逻辑
+        pass
+
+    # ============ 动作方法 ============
+
+    async def start_process(self, **kwargs) -> Dict[str, Any]:
+        """启动加工流程"""
+        return {"success": True}
+
+    async def stop_process(self, **kwargs) -> Dict[str, Any]:
+        """停止加工流程"""
+        return {"success": True}
+
+    # ============ 属性（从硬件实时读取）============
+
+    @property
+    def sys_status(self) -> str:
+        return str(self._read_register("SYS_STATUS"))
+```
+
+### 模板 C：Protocol 工作站
+
+适用于标准化学操作协议的场景，直接使用 `ProtocolNode`。
+
+```python
+from typing import List, Optional
+from pylabrobot.resources import Resource as PLRResource
+
+from unilabos.devices.workstation.workstation_base import ProtocolNode
+
+
+class MyProtocolStation(ProtocolNode):
+    """Protocol 工作站 — 使用标准化学操作协议"""
+
+    def __init__(
+        self,
+        protocol_type: List[str],
+        deck: Optional[PLRResource] = None,
+        *args,
+        **kwargs,
+    ):
+        super().__init__(protocol_type=protocol_type, deck=deck, *args, **kwargs)
+```
+
+> Protocol 工作站通常不需要自定义驱动类，直接使用 `ProtocolNode` 并在注册表和图文件中配置 `protocol_type` 即可。
+
+---
+
+## 第四步：创建子设备驱动（如需要）
+
+工作站的子设备本身是独立设备。按 `docs/ai_guides/add_device.md` 的标准流程创建。
+
+子设备的关键约束：
+- 在图文件中 `parent` 指向工作站 ID
+- 图文件中在工作站的 `children` 数组里列出
+- 如需硬件代理，在子设备的 `config.hardware_interface.name` 指向通信设备 ID
+
+---
+
+## 第五步：创建注册表 YAML
+
+路径：`unilabos/registry/devices/<station_name>.yaml`
+
+### 最小配置
+
+```yaml
+my_workstation:
+  category:
+    - workstation
+  class:
+    module: unilabos.devices.workstation.my_station.my_station:MyWorkstation
+    type: python
+```
+
+启动时 `--complete_registry` 自动补全 `status_types` 和 `action_value_mappings`。
+
+### 完整配置参考
+
+```yaml
+my_workstation:
+  description: "我的工作站"
+  version: "1.0.0"
+  category:
+    - workstation
+    - my_category
+  class:
+    module: unilabos.devices.workstation.my_station.my_station:MyWorkstation
+    type: python
+    status_types:
+      workflow_sequence: String
+      material_info: String
+    action_value_mappings:
+      scheduler_start:
+        type: UniLabJsonCommandAsync
+        goal: {}
+        result:
+          success: success
+      create_order:
+        type: UniLabJsonCommandAsync
+        goal:
+          json_str: json_str
+        result:
+          success: success
+  init_param_schema:
+    config:
+      type: object
+    deck:
+      type: object
+    protocol_type:
+      type: array
+```
+
+### 子设备注册表
+
+子设备有独立的注册表文件，需要在 `category` 中包含工作站标识：
+
+```yaml
+my_reactor:
+  category:
+    - reactor
+    - my_workstation
+  class:
+    module: unilabos.devices.workstation.my_station.my_reactor:MyReactor
+    type: python
+```
+
+---
+
+## 第六步：配置 Deck 资源（如需要）
+
+如果工作站有物料管理需求，需要定义 Deck 类。
+
+### 使用已有 Deck 类
+
+查看 `unilabos/resources/` 目录下是否有适用的 Deck 类。
+
+### 创建自定义 Deck
+
+在 `unilabos/resources/<category>/decks.py` 中定义：
+
+```python
+from pylabrobot.resources import Deck
+from pylabrobot.resources.coordinate import Coordinate
+
+
+def MyStation_Deck(name: str = "MyStation_Deck") -> Deck:
+    deck = Deck(name=name, size_x=2700.0, size_y=1080.0, size_z=1500.0)
+    # 在 deck 上定义子资源位置（carrier、plate 等）
+    return deck
+```
+
+在 `unilabos/resources/<category>/` 下注册或通过注册表引用。
+
+---
+
+## 第七步：配置图文件
+
+图文件路径：`unilabos/test/experiments/<station_name>.json`
+
+### 完整结构
+
+```json
+{
+    "nodes": [
+        {
+            "id": "my_station",
+            "name": "my_station",
+            "children": ["my_deck", "sub_device_1", "sub_device_2"],
+            "parent": null,
+            "type": "device",
+            "class": "my_workstation",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {
+                "api_host": "http://192.168.1.100:8080",
+                "api_key": "YOUR_KEY"
+            },
+            "deck": {
+                "data": {
+                    "_resource_child_name": "my_deck",
+                    "_resource_type": "unilabos.resources.my_module.decks:MyStation_Deck"
+                }
+            },
+            "size_x": 2700.0,
+            "size_y": 1080.0,
+            "size_z": 1500.0,
+            "protocol_type": [],
+            "data": {}
+        },
+        {
+            "id": "my_deck",
+            "name": "my_deck",
+            "children": [],
+            "parent": "my_station",
+            "type": "deck",
+            "class": "MyStation_Deck",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {
+                "type": "MyStation_Deck",
+                "setup": true,
+                "rotation": {"x": 0, "y": 0, "z": 0, "type": "Rotation"}
+            },
+            "data": {}
+        },
+        {
+            "id": "sub_device_1",
+            "name": "sub_device_1",
+            "children": [],
+            "parent": "my_station",
+            "type": "device",
+            "class": "sub_device_registry_name",
+            "position": {"x": 100, "y": 0, "z": 0},
+            "config": {},
+            "data": {}
+        }
+    ]
+}
+```
+
+### 图文件规则
+
+| 字段 | 说明 |
+|------|------|
+| `id` | 节点唯一标识，与 `children` 数组中的引用一致 |
+| `children` | 包含 deck ID 和所有子设备 ID |
+| `parent` | 工作站节点为 `null`；子设备/deck 指向工作站 ID |
+| `type` | 工作站和子设备为 `"device"`；deck 为 `"deck"` |
+| `class` | 对应注册表中的设备名 |
+| `deck.data._resource_child_name` | 必须与 deck 节点的 `id` 一致 |
+| `deck.data._resource_type` | Deck 工厂函数的完整 Python 路径 |
+| `protocol_type` | Protocol 工作站填入协议名列表；否则为 `[]` |
+| `config` | 传入驱动 `__init__` 的 `config` 参数 |
+
+---
+
+## 第八步：验证
+
+```bash
+# 1. 模块可导入
+python -c "from unilabos.devices.workstation.<name>.<name> import <ClassName>"
+
+# 2. 注册表补全
+unilab -g <graph>.json --complete_registry
+
+# 3. 启动测试
+unilab -g <graph>.json
+```
+
+---
+
+## 高级模式
+
+实现外部系统对接型工作站时，详见 [reference.md](reference.md)：RPC 客户端、HTTP 回调服务、连接监控、Config 结构模式（material_type_mappings / warehouse_mapping / workflow_mappings）、ResourceSynchronizer、update_resource、工作流序列、站间物料转移、post_init 完整模式。
+
+---
+
+## 关键规则
+
+1. **`__init__` 必须接受 `deck` 和 `**kwargs`** — `WorkstationBase.__init__` 需要 `deck` 参数
+2. **通过 `self._children` 访问子设备** — 不要自行维护子设备引用
+3. **`post_init` 中启动后台服务** — 不要在 `__init__` 中启动网络连接
+4. **异步方法使用 `await self._ros_node.sleep()`** — 禁止 `time.sleep()` 和 `asyncio.sleep()`
+5. **子设备在图文件中声明** — 不在驱动代码中创建子设备实例
+6. **`deck` 配置中的 `_resource_child_name` 必须与 deck 节点 ID 一致**
+7. **Protocol 工作站优先使用 `ProtocolNode`** — 不需要自定义类
+
+---
+
+## 工作流清单
+
+```
+工作站接入进度：
+- [ ] 1. 确定工作站类型（Protocol / 外部系统 / 硬件控制）
+- [ ] 2. 确认子设备组成和物料需求
+- [ ] 3. 创建工作站驱动 unilabos/devices/workstation/<name>/<name>.py
+- [ ] 4. 创建子设备驱动（如需要，按 add_device.md 流程）
+- [ ] 5. 创建注册表 unilabos/registry/devices/<name>.yaml
+- [ ] 6. 创建/选择 Deck 资源类（如需要）
+- [ ] 7. 配置图文件 unilabos/test/experiments/<name>.json
+- [ ] 8. 验证：可导入 + 注册表补全 + 启动测试
+```
+
+---
+
+## 现有工作站参考
+
+| 工作站 | 注册表名 | 驱动类 | 类型 |
+|--------|----------|--------|------|
+| Protocol 通用 | `workstation` | `ProtocolNode` | Protocol |
+| Bioyond 反应站 | `reaction_station.bioyond` | `BioyondReactionStation` | 外部系统 |
+| Bioyond 配液站 | `bioyond_dispensing_station` | `BioyondDispensingStation` | 外部系统 |
+| 纽扣电池组装 | `coincellassemblyworkstation_device` | `CoinCellAssemblyWorkstation` | 硬件控制 |
+
+### 参考文件路径
+
+- 基类: `unilabos/devices/workstation/workstation_base.py`
+- Bioyond 基类: `unilabos/devices/workstation/bioyond_studio/station.py`
+- 反应站: `unilabos/devices/workstation/bioyond_studio/reaction_station/reaction_station.py`
+- 配液站: `unilabos/devices/workstation/bioyond_studio/dispensing_station/dispensing_station.py`
+- 纽扣电池: `unilabos/devices/workstation/coin_cell_assembly/coin_cell_assembly.py`
+- ROS 节点: `unilabos/ros/nodes/presets/workstation.py`
+- 图文件: `unilabos/test/experiments/reaction_station_bioyond.json`, `dispensing_station_bioyond.json`

.cursor/skills/add-workstation/reference.md

@@ -0,0 +1,371 @@
+# 工作站高级模式参考
+
+本文件是 SKILL.md 的补充，包含外部系统集成、物料同步、配置结构等高级模式。
+Agent 在需要实现这些功能时按需阅读。
+
+---
+
+## 1. 外部系统集成模式
+
+### 1.1 RPC 客户端
+
+与外部 LIMS/MES 系统通信的标准模式。继承 `BaseRequest`，所有接口统一用 POST。
+
+```python
+from unilabos.device_comms.rpc import BaseRequest
+
+
+class MySystemRPC(BaseRequest):
+    """外部系统 RPC 客户端"""
+
+    def __init__(self, host: str, api_key: str):
+        super().__init__(host)
+        self.api_key = api_key
+
+    def _request(self, endpoint: str, data: dict = None) -> dict:
+        return self.post(
+            url=f"{self.host}/api/{endpoint}",
+            params={
+                "apiKey": self.api_key,
+                "requestTime": self.get_current_time_iso8601(),
+                "data": data or {},
+            },
+        )
+
+    def query_status(self) -> dict:
+        return self._request("status/query")
+
+    def create_order(self, order_data: dict) -> dict:
+        return self._request("order/create", order_data)
+```
+
+参考：`unilabos/devices/workstation/bioyond_studio/bioyond_rpc.py`（`BioyondV1RPC`）
+
+### 1.2 HTTP 回调服务
+
+接收外部系统报送的标准模式。使用 `WorkstationHTTPService`，在 `post_init` 中启动。
+
+```python
+from unilabos.devices.workstation.workstation_http_service import WorkstationHTTPService
+
+
+class MyWorkstation(WorkstationBase):
+    def __init__(self, config=None, deck=None, **kwargs):
+        super().__init__(deck=deck, **kwargs)
+        self.config = config or {}
+        http_cfg = self.config.get("http_service_config", {})
+        self._http_service_config = {
+            "host": http_cfg.get("http_service_host", "127.0.0.1"),
+            "port": http_cfg.get("http_service_port", 8080),
+        }
+        self.http_service = None
+
+    def post_init(self, ros_node):
+        super().post_init(ros_node)
+        self.http_service = WorkstationHTTPService(
+            workstation_instance=self,
+            host=self._http_service_config["host"],
+            port=self._http_service_config["port"],
+        )
+        self.http_service.start()
+```
+
+**HTTP 服务路由**（固定端点，由 `WorkstationHTTPHandler` 自动分发）：
+
+| 端点 | 调用的工作站方法 |
+|------|-----------------|
+| `/report/step_finish` | `process_step_finish_report(report_request)` |
+| `/report/sample_finish` | `process_sample_finish_report(report_request)` |
+| `/report/order_finish` | `process_order_finish_report(report_request, used_materials)` |
+| `/report/material_change` | `process_material_change_report(report_data)` |
+| `/report/error_handling` | `handle_external_error(error_data)` |
+
+实现对应方法即可接收回调：
+
+```python
+def process_step_finish_report(self, report_request) -> Dict[str, Any]:
+    """处理步骤完成报告"""
+    step_name = report_request.data.get("stepName")
+    return {"success": True, "message": f"步骤 {step_name} 已处理"}
+
+def process_order_finish_report(self, report_request, used_materials) -> Dict[str, Any]:
+    """处理订单完成报告"""
+    order_code = report_request.data.get("orderCode")
+    return {"success": True}
+```
+
+参考：`unilabos/devices/workstation/workstation_http_service.py`
+
+### 1.3 连接监控
+
+独立线程周期性检测外部系统连接状态，状态变化时发布 ROS 事件。
+
+```python
+class ConnectionMonitor:
+    def __init__(self, workstation, check_interval=30):
+        self.workstation = workstation
+        self.check_interval = check_interval
+        self._running = False
+        self._thread = None
+
+    def start(self):
+        self._running = True
+        self._thread = threading.Thread(target=self._monitor_loop, daemon=True)
+        self._thread.start()
+
+    def _monitor_loop(self):
+        while self._running:
+            try:
+                # 调用外部系统接口检测连接
+                self.workstation.hardware_interface.ping()
+                status = "online"
+            except Exception:
+                status = "offline"
+            time.sleep(self.check_interval)
+```
+
+参考：`unilabos/devices/workstation/bioyond_studio/station.py`（`ConnectionMonitor`）
+
+---
+
+## 2. Config 结构模式
+
+工作站的 `config` 在图文件中定义，传入 `__init__`。以下是常见字段模式：
+
+### 2.1 外部系统连接
+
+```json
+{
+    "api_host": "http://192.168.1.100:8080",
+    "api_key": "YOUR_API_KEY"
+}
+```
+
+### 2.2 HTTP 回调服务
+
+```json
+{
+    "http_service_config": {
+        "http_service_host": "127.0.0.1",
+        "http_service_port": 8080
+    }
+}
+```
+
+### 2.3 物料类型映射
+
+将 PLR 资源类名映射到外部系统的物料类型（名称 + UUID）。用于双向物料转换。
+
+```json
+{
+    "material_type_mappings": {
+        "PLR_ResourceClassName": ["外部系统显示名", "external-type-uuid"],
+        "BIOYOND_PolymerStation_Reactor": ["反应器", "3a14233b-902d-0d7b-..."]
+    }
+}
+```
+
+### 2.4 仓库映射
+
+将仓库名映射到外部系统的仓库 UUID 和库位 UUID。用于入库/出库操作。
+
+```json
+{
+    "warehouse_mapping": {
+        "仓库名": {
+            "uuid": "warehouse-uuid",
+            "site_uuids": {
+                "A01": "site-uuid-A01",
+                "A02": "site-uuid-A02"
+            }
+        }
+    }
+}
+```
+
+### 2.5 工作流映射
+
+将内部工作流名映射到外部系统的工作流 ID。
+
+```json
+{
+    "workflow_mappings": {
+        "internal_workflow_name": "external-workflow-uuid"
+    }
+}
+```
+
+### 2.6 物料默认参数
+
+```json
+{
+    "material_default_parameters": {
+        "NMP": {
+            "unit": "毫升",
+            "density": "1.03",
+            "densityUnit": "g/mL",
+            "description": "N-甲基吡咯烷酮"
+        }
+    }
+}
+```
+
+---
+
+## 3. 资源同步机制
+
+### 3.1 ResourceSynchronizer
+
+抽象基类，用于与外部物料系统双向同步。定义在 `workstation_base.py`。
+
+```python
+from unilabos.devices.workstation.workstation_base import ResourceSynchronizer
+
+
+class MyResourceSynchronizer(ResourceSynchronizer):
+    def __init__(self, workstation, api_client):
+        super().__init__(workstation)
+        self.api_client = api_client
+
+    def sync_from_external(self) -> bool:
+        """从外部系统拉取物料到 deck"""
+        external_materials = self.api_client.list_materials()
+        for material in external_materials:
+            plr_resource = self._convert_to_plr(material)
+            self.workstation.deck.assign_child_resource(plr_resource, coordinate)
+        return True
+
+    def sync_to_external(self, plr_resource) -> bool:
+        """将 deck 中的物料变更推送到外部系统"""
+        external_data = self._convert_from_plr(plr_resource)
+        self.api_client.update_material(external_data)
+        return True
+
+    def handle_external_change(self, change_info) -> bool:
+        """处理外部系统推送的物料变更"""
+        return True
+```
+
+### 3.2 update_resource — 上传资源树到云端
+
+将 PLR Deck 序列化后通过 ROS 服务上传。典型使用场景：
+
+```python
+# 在 post_init 中上传初始 deck
+from unilabos.ros.nodes.base_device_node import ROS2DeviceNode
+
+ROS2DeviceNode.run_async_func(
+    self._ros_node.update_resource, True,
+    **{"resources": [self.deck]}
+)
+
+# 在动作方法中更新特定资源
+ROS2DeviceNode.run_async_func(
+    self._ros_node.update_resource, True,
+    **{"resources": [updated_plate]}
+)
+```
+
+---
+
+## 4. 工作流序列管理
+
+工作站通过 `workflow_sequence` 属性管理任务队列（JSON 字符串形式）。
+
+```python
+class MyWorkstation(WorkstationBase):
+    def __init__(self, **kwargs):
+        super().__init__(**kwargs)
+        self._workflow_sequence = []
+
+    @property
+    def workflow_sequence(self) -> str:
+        """返回 JSON 字符串，ROS 自动发布"""
+        import json
+        return json.dumps(self._workflow_sequence)
+
+    async def append_to_workflow_sequence(self, workflow_name: str) -> Dict[str, Any]:
+        """添加工作流到队列"""
+        self._workflow_sequence.append({
+            "name": workflow_name,
+            "status": "pending",
+            "created_at": time.time(),
+        })
+        return {"success": True}
+
+    async def clear_workflows(self) -> Dict[str, Any]:
+        """清空工作流队列"""
+        self._workflow_sequence = []
+        return {"success": True}
+```
+
+---
+
+## 5. 站间物料转移
+
+工作站之间转移物料的模式。通过 ROS ActionClient 调用目标站的动作。
+
+```python
+async def transfer_materials_to_another_station(
+    self,
+    target_device_id: str,
+    transfer_groups: list,
+    **kwargs,
+) -> Dict[str, Any]:
+    """将物料转移到另一个工作站"""
+    target_node = self._children.get(target_device_id)
+    if not target_node:
+        # 通过 ROS 节点查找非子设备的目标站
+        pass
+
+    for group in transfer_groups:
+        resource = self.find_resource_by_name(group["resource_name"])
+        # 从本站 deck 移除
+        resource.unassign()
+        # 调用目标站的接收方法
+        # ...
+
+    return {"success": True, "transferred": len(transfer_groups)}
+```
+
+参考：`BioyondDispensingStation.transfer_materials_to_reaction_station`
+
+---
+
+## 6. post_init 完整模式
+
+`post_init` 是工作站初始化的关键阶段，此时 ROS 节点和子设备已就绪。
+
+```python
+def post_init(self, ros_node):
+    super().post_init(ros_node)
+
+    # 1. 初始化外部系统客户端（此时 config 已可用）
+    self.rpc_client = MySystemRPC(
+        host=self.config.get("api_host"),
+        api_key=self.config.get("api_key"),
+    )
+    self.hardware_interface = self.rpc_client
+
+    # 2. 启动连接监控
+    self.connection_monitor = ConnectionMonitor(self)
+    self.connection_monitor.start()
+
+    # 3. 启动 HTTP 回调服务
+    if hasattr(self, '_http_service_config'):
+        self.http_service = WorkstationHTTPService(
+            workstation_instance=self,
+            host=self._http_service_config["host"],
+            port=self._http_service_config["port"],
+        )
+        self.http_service.start()
+
+    # 4. 上传 deck 到云端
+    ROS2DeviceNode.run_async_func(
+        self._ros_node.update_resource, True,
+        **{"resources": [self.deck]}
+    )
+
+    # 5. 初始化资源同步器（可选）
+    self.resource_synchronizer = MyResourceSynchronizer(self, self.rpc_client)
+```

.cursor/skills/edit-experiment-graph/SKILL.md

@@ -0,0 +1,381 @@
+---
+name: edit-experiment-graph
+description: Guide for creating and editing experiment graph files in Uni-Lab-OS (创建/编辑实验组态图). Covers node types, link types, parent-child relationships, deck configuration, and common graph patterns. Use when the user wants to create a graph file, edit an experiment configuration, set up device topology, or mentions 图文件/graph/组态/拓扑/实验图/experiment JSON.
+---
+
+# 创建/编辑实验组态图
+
+实验图（Graph File）定义设备拓扑、物理连接和物料配置。系统启动时加载图文件，初始化所有设备和连接关系。
+
+路径：`unilabos/test/experiments/<name>.json`
+
+---
+
+## 第一步：确认需求
+
+向用户确认：
+
+| 信息 | 说明 |
+|------|------|
+| 场景类型 | 单设备调试 / 多设备联调 / 工作站完整图 |
+| 包含的设备 | 设备 ID、注册表 class 名、配置参数 |
+| 连接关系 | 物理连接（管道）/ 通信连接（串口）/ 无连接 |
+| 父子关系 | 是否有工作站包含子设备 |
+| 物料需求 | 是否需要 Deck、容器、试剂瓶 |
+
+---
+
+## 第二步：JSON 顶层结构
+
+```json
+{
+    "nodes": [],
+    "links": []
+}
+```
+
+> `links` 也可写作 `edges`，加载时两者等效。
+
+---
+
+## 第三步：定义 Nodes
+
+### 节点字段
+
+| 字段 | 类型 | 必需 | 默认值 | 说明 |
+|------|------|------|--------|------|
+| `id` | string | **是** | — | 节点唯一标识，links 和 children 中引用此值 |
+| `class` | string | **是** | — | 对应注册表名（设备/资源 YAML 的 key），容器可为 `null` |
+| `name` | string | 否 | 同 `id` | 显示名称，缺省时自动用 `id` |
+| `type` | string | 否 | `"device"` | 节点类型（见下表），缺省时自动设为 `"device"` |
+| `children` | string[] | 否 | `[]` | 子节点 ID 列表 |
+| `parent` | string\|null | 否 | `null` | 父节点 ID，顶层设备为 `null` |
+| `position` | object | 否 | `{x:0,y:0,z:0}` | 空间坐标 |
+| `config` | object | 否 | `{}` | 传给驱动 `__init__` 的参数 |
+| `data` | object | 否 | `{}` | 初始运行状态 |
+| `size_x/y/z` | float | 否 | — | 节点物理尺寸（工作站节点常用） |
+
+> 非标准字段（如 `api_host`）会自动移入 `config`。
+
+### 节点类型
+
+| `type` | 用途 | `class` 要求 |
+|--------|------|-------------|
+| `device` | 设备（默认） | 注册表中的设备名 |
+| `deck` | 工作台面 | Deck 工厂函数/类名 |
+| `container` | 容器（烧瓶、反应釜） | `null` 或具体容器类名 |
+
+### 设备节点模板
+
+```json
+{
+    "id": "my_device",
+    "name": "我的设备",
+    "children": [],
+    "parent": null,
+    "type": "device",
+    "class": "registry_device_name",
+    "position": {"x": 0, "y": 0, "z": 0},
+    "config": {
+        "port": "/dev/ttyUSB0",
+        "baudrate": 115200
+    },
+    "data": {
+        "status": "Idle"
+    }
+}
+```
+
+### 容器节点模板
+
+容器用于协议系统中表示试剂瓶、反应釜等，`class` 通常为 `null`：
+
+```json
+{
+    "id": "flask_DMF",
+    "name": "DMF试剂瓶",
+    "children": [],
+    "parent": "my_station",
+    "type": "container",
+    "class": null,
+    "position": {"x": 200, "y": 500, "z": 0},
+    "config": {"max_volume": 1000.0},
+    "data": {
+        "liquid": [{"liquid_type": "DMF", "liquid_volume": 800.0}]
+    }
+}
+```
+
+### Deck 节点模板
+
+```json
+{
+    "id": "my_deck",
+    "name": "my_deck",
+    "children": [],
+    "parent": "my_station",
+    "type": "deck",
+    "class": "MyStation_Deck",
+    "position": {"x": 0, "y": 0, "z": 0},
+    "config": {
+        "type": "MyStation_Deck",
+        "setup": true,
+        "rotation": {"x": 0, "y": 0, "z": 0, "type": "Rotation"}
+    },
+    "data": {}
+}
+```
+
+---
+
+## 第四步：定义 Links
+
+### Link 字段
+
+| 字段 | 类型 | 说明 |
+|------|------|------|
+| `source` | string | 源节点 ID |
+| `target` | string | 目标节点 ID |
+| `type` | string | `"physical"` / `"fluid"` / `"communication"` |
+| `port` | object | 端口映射 `{source_id: "port_name", target_id: "port_name"}` |
+
+### 物理/流体连接
+
+设备间的管道连接，协议系统用此查找路径：
+
+```json
+{
+    "source": "multiway_valve_1",
+    "target": "flask_DMF",
+    "type": "fluid",
+    "port": {
+        "multiway_valve_1": "2",
+        "flask_DMF": "outlet"
+    }
+}
+```
+
+### 通信连接
+
+设备间的串口/IO 通信代理，加载时自动将端口信息写入目标设备 config：
+
+```json
+{
+    "source": "pump_1",
+    "target": "serial_device",
+    "type": "communication",
+    "port": {
+        "pump_1": "port",
+        "serial_device": "port"
+    }
+}
+```
+
+---
+
+## 第五步：父子关系与工作站配置
+
+### 工作站 + 子设备
+
+工作站节点的 `children` 列出所有子节点 ID，子节点的 `parent` 指向工作站：
+
+```json
+{
+    "id": "my_station",
+    "children": ["my_deck", "pump_1", "valve_1", "reactor_1"],
+    "parent": null,
+    "type": "device",
+    "class": "workstation",
+    "config": {
+        "protocol_type": ["PumpTransferProtocol", "CleanProtocol"]
+    }
+}
+```
+
+### 工作站 + Deck 引用
+
+工作站节点中通过 `deck` 字段引用 Deck：
+
+```json
+{
+    "id": "my_station",
+    "children": ["my_deck", "sub_device_1"],
+    "deck": {
+        "data": {
+            "_resource_child_name": "my_deck",
+            "_resource_type": "unilabos.resources.my_module.decks:MyDeck"
+        }
+    }
+}
+```
+
+**关键约束：**
+- `_resource_child_name` 必须与 Deck 节点的 `id` 一致
+- `_resource_type` 为 Deck 类/工厂函数的完整 Python 路径
+
+---
+
+## 常见图模式
+
+### 模式 A：单设备调试
+
+最简形式，一个设备节点，无连接：
+
+```json
+{
+    "nodes": [
+        {
+            "id": "my_device",
+            "name": "my_device",
+            "children": [],
+            "parent": null,
+            "type": "device",
+            "class": "motor.zdt_x42",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {"port": "/dev/ttyUSB0", "baudrate": 115200},
+            "data": {"status": "idle"}
+        }
+    ],
+    "links": []
+}
+```
+
+### 模式 B：Protocol 工作站（泵+阀+容器）
+
+工作站配合泵、阀、容器和物理连接，用于协议编译：
+
+```json
+{
+    "nodes": [
+        {
+            "id": "station", "name": "协议工作站",
+            "class": "workstation", "type": "device", "parent": null,
+            "children": ["pump", "valve", "flask_solvent", "reactor", "waste"],
+            "config": {"protocol_type": ["PumpTransferProtocol"]}
+        },
+        {"id": "pump", "name": "转移泵", "class": "virtual_transfer_pump",
+         "type": "device", "parent": "station",
+         "config": {"port": "VIRTUAL", "max_volume": 25.0},
+         "data": {"status": "Idle", "position": 0.0, "valve_position": "0"}},
+        {"id": "valve", "name": "多通阀", "class": "virtual_multiway_valve",
+         "type": "device", "parent": "station",
+         "config": {"port": "VIRTUAL", "positions": 8}},
+        {"id": "flask_solvent", "name": "溶剂瓶", "type": "container",
+         "class": null, "parent": "station",
+         "config": {"max_volume": 1000.0},
+         "data": {"liquid": [{"liquid_type": "DMF", "liquid_volume": 500}]}},
+        {"id": "reactor", "name": "反应器", "type": "container",
+         "class": null, "parent": "station"},
+        {"id": "waste", "name": "废液瓶", "type": "container",
+         "class": null, "parent": "station"}
+    ],
+    "links": [
+        {"source": "pump", "target": "valve", "type": "fluid",
+         "port": {"pump": "transferpump", "valve": "transferpump"}},
+        {"source": "valve", "target": "flask_solvent", "type": "fluid",
+         "port": {"valve": "1", "flask_solvent": "outlet"}},
+        {"source": "valve", "target": "reactor", "type": "fluid",
+         "port": {"valve": "2", "reactor": "inlet"}},
+        {"source": "valve", "target": "waste", "type": "fluid",
+         "port": {"valve": "3", "waste": "inlet"}}
+    ]
+}
+```
+
+### 模式 C：外部系统工作站 + Deck
+
+```json
+{
+    "nodes": [
+        {
+            "id": "bioyond_station", "class": "reaction_station.bioyond",
+            "parent": null, "children": ["bioyond_deck"],
+            "config": {
+                "api_host": "http://192.168.1.100:8080",
+                "api_key": "YOUR_KEY",
+                "material_type_mappings": {},
+                "warehouse_mapping": {}
+            },
+            "deck": {
+                "data": {
+                    "_resource_child_name": "bioyond_deck",
+                    "_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_PolymerReactionStation_Deck"
+                }
+            }
+        },
+        {
+            "id": "bioyond_deck", "class": "BIOYOND_PolymerReactionStation_Deck",
+            "parent": "bioyond_station", "type": "deck",
+            "config": {"type": "BIOYOND_PolymerReactionStation_Deck", "setup": true}
+        }
+    ],
+    "links": []
+}
+```
+
+### 模式 D：通信代理（串口设备）
+
+泵通过串口设备通信，使用 `communication` 类型的 link。加载时系统会自动将串口端口信息写入泵的 `config`：
+
+```json
+{
+    "nodes": [
+        {"id": "station", "name": "工作站", "type": "device",
+         "class": "workstation", "parent": null,
+         "children": ["serial_1", "pump_1"]},
+        {"id": "serial_1", "name": "串口", "type": "device",
+         "class": "serial", "parent": "station",
+         "config": {"port": "COM7", "baudrate": 9600}},
+        {"id": "pump_1", "name": "注射泵", "type": "device",
+         "class": "syringe_pump_with_valve.runze.SY03B-T08", "parent": "station"}
+    ],
+    "links": [
+        {"source": "pump_1", "target": "serial_1", "type": "communication",
+         "port": {"pump_1": "port", "serial_1": "port"}}
+    ]
+}
+```
+
+---
+
+## 验证
+
+```bash
+# 启动测试
+unilab -g unilabos/test/experiments/<name>.json --complete_registry
+
+# 仅检查注册表
+python -m unilabos --check_mode --skip_env_check
+```
+
+---
+
+## 高级模式
+
+处理复杂图文件时，详见 [reference.md](reference.md)：ResourceDict 完整字段 schema、Pose 标准化规则、Handle 验证机制、GraphML 格式支持、外部系统工作站完整 config 结构。
+
+---
+
+## 常见错误
+
+| 错误 | 原因 | 修复 |
+|------|------|------|
+| `class` 找不到 | 注册表中无此设备名 | 在 `unilabos/registry/devices/` 或 `resources/` 中搜索正确名称 |
+| children/parent 不一致 | 子节点 `parent` 与父节点 `children` 不匹配 | 确保双向一致 |
+| `_resource_child_name` 不匹配 | Deck 引用名与 Deck 节点 `id` 不同 | 保持一致 |
+| Link 端口错误 | `port` 中的 key 不是 source/target 的 `id` | key 必须是对应节点的 `id` |
+| 重复 UUID | 多个节点有相同 `uuid` | 删除或修改 UUID |
+
+---
+
+## 参考路径
+
+| 内容 | 路径 |
+|------|------|
+| 图文件目录 | `unilabos/test/experiments/` |
+| 协议测试站 | `unilabos/test/experiments/Protocol_Test_Station/` |
+| 图加载代码 | `unilabos/resources/graphio.py` |
+| 节点模型 | `unilabos/resources/resource_tracker.py` |
+| 设备注册表 | `unilabos/registry/devices/` |
+| 资源注册表 | `unilabos/registry/resources/` |
+| 用户文档 | `docs/user_guide/graph_files.md` |

.cursor/skills/edit-experiment-graph/reference.md

@@ -0,0 +1,255 @@
+# 实验图高级参考
+
+本文件是 SKILL.md 的补充，包含 ResourceDict 完整 schema、Handle 验证、GraphML 格式、Pose 标准化规则和复杂图文件结构。Agent 在需要处理这些场景时按需阅读。
+
+---
+
+## 1. ResourceDict 完整字段
+
+`unilabos/resources/resource_tracker.py` 中定义的节点数据模型：
+
+| 字段 | 类型 | 别名 | 说明 |
+|------|------|------|------|
+| `id` | `str` | — | 节点唯一标识 |
+| `uuid` | `str` | — | 全局唯一标识 |
+| `name` | `str` | — | 显示名称 |
+| `description` | `str` | — | 描述（默认 `""` ） |
+| `resource_schema` | `Dict[str, Any]` | `schema` | 资源 schema |
+| `model` | `Dict[str, Any]` | — | 3D 模型信息 |
+| `icon` | `str` | — | 图标（默认 `""` ） |
+| `parent_uuid` | `Optional[str]` | — | 父节点 UUID |
+| `parent` | `Optional[ResourceDict]` | — | 父节点引用（序列化时 exclude） |
+| `type` | `Union[Literal["device"], str]` | — | 节点类型 |
+| `klass` | `str` | `class` | 注册表类名 |
+| `pose` | `ResourceDictPosition` | — | 位姿信息 |
+| `config` | `Dict[str, Any]` | — | 配置参数 |
+| `data` | `Dict[str, Any]` | — | 运行时数据 |
+| `extra` | `Dict[str, Any]` | — | 扩展数据 |
+
+### Pose 完整结构（ResourceDictPosition）
+
+| 字段 | 类型 | 默认值 | 说明 |
+|------|------|--------|------|
+| `size` | `{width, height, depth}` | `{0,0,0}` | 节点尺寸 |
+| `scale` | `{x, y, z}` | `{1,1,1}` | 缩放比例 |
+| `layout` | `"2d"/"x-y"/"z-y"/"x-z"` | `"x-y"` | 布局方向 |
+| `position` | `{x, y, z}` | `{0,0,0}` | 2D 位置 |
+| `position3d` | `{x, y, z}` | `{0,0,0}` | 3D 位置 |
+| `rotation` | `{x, y, z}` | `{0,0,0}` | 旋转角度 |
+| `cross_section_type` | `"rectangle"/"circle"/"rounded_rectangle"` | `"rectangle"` | 横截面形状 |
+
+---
+
+## 2. Position / Pose 标准化规则
+
+图文件中的 `position` 有多种写法，加载时自动标准化。
+
+### 输入格式兼容
+
+```json
+// 格式 A: 直接 {x, y, z}（最常用）
+"position": {"x": 100, "y": 200, "z": 0}
+
+// 格式 B: 嵌套 position
+"position": {"position": {"x": 100, "y": 200, "z": 0}}
+
+// 格式 C: 使用 pose 字段
+"pose": {"position": {"x": 100, "y": 200, "z": 0}}
+
+// 格式 D: 顶层 x, y, z（无 position 字段）
+"x": 100, "y": 200, "z": 0
+```
+
+### 标准化流程
+
+1. **graphio.py `canonicalize_nodes_data`**：若 `position` 不是 dict，从节点顶层提取 `x/y/z` 填入 `pose.position`
+2. **resource_tracker.py `get_resource_instance_from_dict`**：若 `position.x` 存在（旧格式），转为 `{"position": {"x":..., "y":..., "z":...}}`
+3. `pose.size` 从 `config.size_x/size_y/size_z` 自动填充
+
+---
+
+## 3. Handle 验证
+
+启动时系统验证 link 中的 `sourceHandle` / `targetHandle` 是否在注册表的 `handles` 中定义。
+
+```python
+# unilabos/app/main.py (约 449-481 行)
+source_handler_keys = [
+    h["handler_key"] for h in materials[source_node.klass]["handles"]
+    if h["io_type"] == "source"
+]
+target_handler_keys = [
+    h["handler_key"] for h in materials[target_node.klass]["handles"]
+    if h["io_type"] == "target"
+]
+if source_handle not in source_handler_keys:
+    print_status(f"节点 {source_node.id} 的source端点 {source_handle} 不存在", "error")
+    resource_edge_info.pop(...)  # 移除非法 link
+```
+
+**Handle 定义在注册表 YAML 中：**
+
+```yaml
+my_device:
+  handles:
+  - handler_key: access
+    io_type: target
+    data_type: fluid
+    side: NORTH
+    label: access
+```
+
+> 大多数简单设备不定义 handles，此验证仅对有 `sourceHandle`/`targetHandle` 的 link 生效。
+
+---
+
+## 4. GraphML 格式支持
+
+除 JSON 外，系统也支持 GraphML 格式（`unilabos/resources/graphio.py::read_graphml`）。
+
+### 与 JSON 的关键差异
+
+| 特性 | JSON | GraphML |
+|------|------|---------|
+| 父子关系 | `parent`/`children` 字段 | `::` 分隔的节点 ID（如 `station::pump_1`） |
+| 加载后 | 直接解析 | 先 `nx.read_graphml` 再转 JSON 格式 |
+| 输出 | 不生成副本 | 自动生成等价的 `.json` 文件 |
+
+### GraphML 转换流程
+
+```
+nx.read_graphml(file)
+    ↓ 用 label 重映射节点名
+    ↓ 从 "::" 推断 parent_relation
+nx.relabel_nodes + nx.node_link_data
+    ↓ canonicalize_nodes_data + canonicalize_links_ports
+    ↓ 写出等价 JSON 文件
+physical_setup_graph + handle_communications
+```
+
+---
+
+## 5. 复杂图文件结构示例
+
+### 外部系统工作站完整 config
+
+以 `reaction_station_bioyond.json` 为例，工作站 `config` 中的关键字段：
+
+```json
+{
+    "config": {
+        "api_key": "DE9BDDA0",
+        "api_host": "http://172.21.103.36:45388",
+
+        "workflow_mappings": {
+            "scheduler_start": {"workflow": "start", "params": {}},
+            "create_order": {"workflow": "create_order", "params": {}}
+        },
+
+        "material_type_mappings": {
+            "BIOYOND_PolymerStation_Reactor": ["反应器", "type-uuid-here"],
+            "BIOYOND_PolymerStation_1BottleCarrier": ["试剂瓶", "type-uuid-here"]
+        },
+
+        "warehouse_mapping": {
+            "堆栈1左": {
+                "uuid": "warehouse-uuid-here",
+                "site_uuids": {
+                    "A01": "site-uuid-1",
+                    "A02": "site-uuid-2"
+                }
+            }
+        },
+
+        "http_service_config": {
+            "enabled": true,
+            "host": "0.0.0.0",
+            "port": 45399,
+            "routes": ["/callback/workflow", "/callback/material"]
+        },
+
+        "deck": {
+            "data": {
+                "_resource_child_name": "Bioyond_Deck",
+                "_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_PolymerReactionStation_Deck"
+            }
+        },
+
+        "size_x": 2700.0,
+        "size_y": 1080.0,
+        "size_z": 2500.0,
+        "protocol_type": [],
+        "data": {}
+    }
+}
+```
+
+### 子设备 Reactor 节点
+
+```json
+{
+    "id": "reactor_1",
+    "name": "reactor_1",
+    "parent": "reaction_station_bioyond",
+    "type": "device",
+    "class": "bioyond_reactor",
+    "position": {"x": 1150, "y": 300, "z": 0},
+    "config": {
+        "reactor_index": 0,
+        "bioyond_workflow_key": "reactor_1"
+    },
+    "data": {}
+}
+```
+
+### Deck 节点
+
+```json
+{
+    "id": "Bioyond_Deck",
+    "name": "Bioyond_Deck",
+    "parent": "reaction_station_bioyond",
+    "type": "deck",
+    "class": "BIOYOND_PolymerReactionStation_Deck",
+    "position": {"x": 0, "y": 0, "z": 0},
+    "config": {
+        "type": "BIOYOND_PolymerReactionStation_Deck",
+        "setup": true,
+        "rotation": {"x": 0, "y": 0, "z": 0, "type": "Rotation"}
+    },
+    "data": {}
+}
+```
+
+---
+
+## 6. Link 端口标准化
+
+`graphio.py::canonicalize_links_ports` 处理 `port` 字段的多种格式：
+
+```python
+# 输入: 字符串格式 "(A,B)"
+"port": "(pump_1, valve_1)"
+# 输出: 字典格式
+"port": {"source_id": "pump_1", "target_id": "valve_1"}
+
+# 输入: 已是字典
+"port": {"pump_1": "port", "serial_1": "port"}
+# 保持不变
+
+# 输入: 无 port 字段
+# 自动补充空 port
+```
+
+---
+
+## 7. 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| ResourceDict 模型 | `unilabos/resources/resource_tracker.py` |
+| 图加载 + 标准化 | `unilabos/resources/graphio.py` |
+| Handle 验证 | `unilabos/app/main.py` (449-481 行) |
+| 反应站图文件 | `unilabos/test/experiments/reaction_station_bioyond.json` |
+| 配液站图文件 | `unilabos/test/experiments/dispensing_station_bioyond.json` |
+| 用户文档 | `docs/user_guide/graph_files.md` |

.cursorignore

@@ -0,0 +1,188 @@
+# ============================================================
+# Uni-Lab-OS Cursor Ignore 配置，控制 Cursor AI 的文件索引范围
+# ============================================================
+
+# ==================== 敏感配置文件 ====================
+# 本地配置（可能包含密钥）
+**/local_config.py
+test_config.py
+local_test*.py
+
+# 环境变量和密钥
+.env
+.env.*
+**/.certs/
+*.pem
+*.key
+credentials.json
+secrets.yaml
+
+# ==================== 二进制和 3D 模型文件 ====================
+# 3D 模型文件（无需索引）
+*.stl
+*.dae
+*.glb
+*.gltf
+*.obj
+*.fbx
+*.blend
+
+# URDF/Xacro 机器人描述文件（大型XML）
+*.xacro
+
+# 图片文件
+*.png
+*.jpg
+*.jpeg
+*.gif
+*.webp
+*.ico
+*.svg
+*.bmp
+
+# 压缩包
+*.zip
+*.tar
+*.tar.gz
+*.tgz
+*.bz2
+*.rar
+*.7z
+
+# ==================== Python 生成文件 ====================
+__pycache__/
+*.py[cod]
+*$py.class
+*.so
+*.pyd
+*.egg
+*.egg-info/
+.eggs/
+dist/
+build/
+*.manifest
+*.spec
+
+# ==================== IDE 和编辑器 ====================
+.idea/
+.vscode/
+*.swp
+*.swo
+*~
+.#*
+
+# ==================== 测试和覆盖率 ====================
+.pytest_cache/
+.coverage
+.coverage.*
+htmlcov/
+.tox/
+.nox/
+coverage.xml
+*.cover
+
+# ==================== 虚拟环境 ====================
+.venv/
+venv/
+env/
+ENV/
+
+# ==================== ROS 2 生成文件 ====================
+# ROS 构建目录
+build/
+install/
+log/
+logs/
+devel/
+
+# ROS 消息生成
+msg_gen/
+srv_gen/
+msg/*Action.msg
+msg/*ActionFeedback.msg
+msg/*ActionGoal.msg
+msg/*ActionResult.msg
+msg/*Feedback.msg
+msg/*Goal.msg
+msg/*Result.msg
+msg/_*.py
+srv/_*.py
+build_isolated/
+devel_isolated/
+
+# ROS 动态配置
+*.cfgc
+/cfg/cpp/
+/cfg/*.py
+
+# ==================== 项目特定目录 ====================
+# 工作数据目录
+unilabos_data/
+
+# 临时和输出目录
+temp/
+output/
+cursor_docs/
+configs/
+
+# 文档构建
+docs/_build/
+/site
+
+# ==================== 大型数据文件 ====================
+# 点云数据
+*.pcd
+
+# GraphML 图形文件
+*.graphml
+
+# 日志文件
+*.log
+
+# 数据库
+*.sqlite3
+*.db
+
+# Jupyter 检查点
+.ipynb_checkpoints/
+
+# ==================== 设备网格资源 ====================
+# 3D 网格文件目录（包含大量 STL/DAE 文件）
+unilabos/device_mesh/devices/**/*.stl
+unilabos/device_mesh/devices/**/*.dae
+unilabos/device_mesh/resources/**/*.stl
+unilabos/device_mesh/resources/**/*.glb
+unilabos/device_mesh/resources/**/*.xacro
+
+# RViz 配置
+*.rviz
+
+# ==================== 系统文件 ====================
+.DS_Store
+Thumbs.db
+desktop.ini
+
+# ==================== 锁文件 ====================
+poetry.lock
+Pipfile.lock
+pdm.lock
+package-lock.json
+yarn.lock
+
+# ==================== 类型检查缓存 ====================
+.mypy_cache/
+.dmypy.json
+.pytype/
+.pyre/
+pyrightconfig.json
+
+# ==================== 其他 ====================
+# Catkin
+CATKIN_IGNORE
+
+# Eclipse/Qt
+.project
+.cproject
+CMakeLists.txt.user
+*.user
+qtcreator-*

.github/copilot-instructions.md

@@ -0,0 +1,11 @@
+## 设备接入
+
+当被要求添加设备驱动时，参考 `docs/ai_guides/add_device.md`。
+该指南包含完整的模板和已有设备接口参考。
+
+## 关键规则
+
+- 动作方法的参数名是接口契约，不可重命名
+- `status` 字符串必须与同类已有设备一致
+- `self.data` 必须在 `__init__` 中预填充所有属性字段
+- 异步方法中使用 `await self._ros_node.sleep()`，禁止 `time.sleep()`

AGENTS.md

@@ -0,0 +1,21 @@
+# Uni-Lab-OS AI Agent 指南
+
+## 设备接入
+
+当用户要求添加/接入新设备时，读取 `docs/ai_guides/add_device.md` 并按其流程执行。
+该指南完全自包含，包含物模型模板、现有设备接口快照、常见错误和验证清单。
+
+## 关键规则
+
+- 动作方法的参数名是接口契约，不可重命名（如 `volume` 不能改为 `volume_ml`）
+- `status` 字符串必须与同类已有设备一致（如 `"Idle"` 不能改为 `"就绪"`）
+- `self.data` 必须在 `__init__` 中预填充所有属性字段
+- 异步方法中使用 `await self._ros_node.sleep()`，禁止 `time.sleep()` 和 `asyncio.sleep()`
+
+## 项目结构
+
+- 设备驱动：`unilabos/devices/<category>/<device_name>.py`
+- 设备注册表：`unilabos/registry/devices/<device_name>.yaml`
+- 实验图文件：`unilabos/test/experiments/*.json`
+- 人类开发文档：`docs/developer_guide/`
+- AI 专用指南：`docs/ai_guides/`

CLAUDE.md

@@ -0,0 +1,14 @@
+# Uni-Lab-OS
+
+## 设备接入
+
+读取 `docs/ai_guides/add_device.md` 获取完整的自包含指南。
+如果可以访问仓库，优先搜索 `unilabos/registry/devices/` 获取最新设备接口；
+否则使用指南中内联的「现有设备接口快照」。
+
+## 关键规则
+
+- 动作方法的参数名是接口契约，不可重命名（如 `volume` 不能改为 `volume_ml`）
+- `status` 字符串必须与同类已有设备一致（如 `"Idle"` 不能改为 `"就绪"`）
+- `self.data` 必须在 `__init__` 中预填充所有属性字段
+- 异步方法中使用 `await self._ros_node.sleep()`，禁止 `time.sleep()` 和 `asyncio.sleep()`

docs/ai_guides/agent_prompt_template.md

@@ -0,0 +1,344 @@
+# Uni-Lab-OS 设备接入 Agent — 提示词模板
+
+> 本文件提供一套可直接复制使用的 Agent 系统提示词，以及各平台的配置说明。
+> 提示词模板与 `add_device.md`（领域知识）配合使用，前者控制 Agent 行为，后者提供完整的技术细节。
+
+---
+
+## 系统提示词模板
+
+以下内容可直接作为系统提示词 / Instructions / Custom Instructions 使用。`{{...}}` 标记的变量根据平台替换。
+
+---
+
+### 开始复制 ↓
+
+```
+你是 Uni-Lab-OS 设备接入专家。你的任务是帮助用户将新的实验室硬件设备接入 Uni-Lab-OS 系统。
+
+你能做的事：
+- 根据用户描述，生成完整的设备驱动代码（Python）、注册表（YAML）和实验图文件（JSON）
+- 解读用户提供的通信协议文档、SDK 代码、或口述的指令格式
+- 诊断已有驱动代码的接口对齐问题
+
+你不能做的事：
+- 凭空猜测硬件私有通信指令（必须从用户提供的资料中获取）
+- 替代真实硬件联调测试
+
+## 知识来源
+
+{{KNOWLEDGE_LOADING}}
+
+## 工作流程
+
+当用户要求接入新设备时，严格按以下流程执行。每个暂停点必须等待用户确认后再继续。
+
+### 阶段 1：设备画像（交互）
+
+向用户收集以下三个信息，可以一次性提问：
+
+1. **设备类别** — 属于以下哪一种？
+   - temperature（温控）、pump_and_valve（泵阀）、motor（电机）
+   - heaterstirrer（加热搅拌）、balance（天平）、sensor（传感器）
+   - liquid_handling（液体处理）、robot_arm（机械臂）、workstation（工作站）
+   - virtual（虚拟设备）、custom（自定义）
+   - 如果是 pump_and_valve，进一步确认子类型：注射泵 / 电磁阀 / 蠕动泵
+
+2. **设备英文名称** — 用于文件名和类名（如 my_heater、runze_sy03b）
+
+3. **通信协议** — Serial(RS232/RS485) / Modbus RTU / Modbus TCP / TCP Socket / HTTP API / OPC UA / 无通信（虚拟）
+
+⏸️ **暂停：等待用户回答后继续**
+
+### 阶段 2：指令协议收集（交互）
+
+根据上一步确定的通信协议，引导用户提供指令信息：
+
+- 如果用户有 **SDK/驱动代码**：请用户提供代码文件，你从中提取通信逻辑
+- 如果用户有 **协议文档**：请用户提供文档（PDF/图片/文本），你从中解析指令格式
+- 如果用户 **口头描述**：针对每个标准动作逐一确认硬件指令
+- 如果是 **标准协议**（Modbus 寄存器表、SCPI）：请用户提供寄存器/指令映射
+- 如果是 **虚拟设备**：跳过此阶段
+
+⏸️ **暂停：确认已获取足够的指令协议信息**
+
+### 阶段 3：确认摘要
+
+在开始生成代码前，向用户展示你的理解摘要：
+
+```
+设备接入摘要：
+- 设备名称：<name>
+- 设备类别：<category>（<subtype>）
+- 通信协议：<protocol>
+- 指令来源：<source>
+- 将要实现的属性：<list>
+- 将要实现的动作：<list>
+- 同类已有设备：<existing>（将对齐其接口）
+```
+
+⏸️ **暂停：用户确认"没问题"后再生成代码**
+
+### 阶段 4：自动生成（无需暂停）
+
+按以下顺序自动执行：
+
+1. **对齐同类设备接口**（指南第四步）
+   - 查阅指南中的「现有设备接口快照」或搜索仓库注册表
+   - 确保所有已有设备的 status_types 和动作方法都被覆盖
+   - 参数名必须完全一致
+
+2. **生成驱动代码** — `unilabos/devices/<category>/<name>.py`
+
+3. **生成注册表** — `unilabos/registry/devices/<name>.yaml`（最小配置）
+
+4. **生成图文件** — `unilabos/test/experiments/graph_example_<name>.json`
+
+### 阶段 5：验证输出
+
+生成完成后，逐项检查对齐验证清单并展示结果：
+
+```
+对齐验证清单：
+- [x] 所有动作方法的参数名与已有设备完全一致
+- [x] status 属性返回的字符串值与已有设备一致
+- [x] 已有设备的所有 status_types 字段都有对应 @property
+- [x] 已有设备的所有非 auto- 前缀的 action 都有对应方法
+- [x] self.data 在 __init__ 中已预填充所有属性字段的默认值
+- [x] 串口/二进制协议的响应解析先定位帧起始标记
+```
+
+如果有未通过的项，主动修复后再展示。
+
+## 硬约束（违反任何一条都会导致设备接入失败）
+
+1. **禁止重命名参数** — 动作方法的参数名（如 volume、position、max_velocity）是接口契约，框架通过参数名分派调用。绝不能加后缀（如 volume_ml）、改名（如 speed_ml_s）。单位写在 docstring 中。
+
+2. **status 字符串必须一致** — 如果同类已有设备用英文（如 "Idle" / "Busy"），新驱动必须用相同的字符串，不能改为中文（如 "就绪"）。
+
+3. **self.data 必须预填充** — 不能用空字典 {}。框架在 initialize() 之前就可能读取属性值。每个 @property 对应的键都必须在 __init__ 中有初始值。
+
+4. **禁止跳过接口对齐** — 对齐同类设备接口是强制步骤。缺失的属性和动作会导致设备在工作流中不可互换。
+
+5. **串口解析先找帧头** — RS-485 总线上响应前常有回声/噪声字节。必须先定位帧起始标记（如 /、0xFE），禁止用硬编码索引直接解析。
+
+6. **异步等待用 _ros_node.sleep** — 在 async 方法中使用 await self._ros_node.sleep()，禁止 time.sleep()（阻塞事件循环）和 asyncio.sleep()。
+
+7. **物理单位对外暴露** — 对外参数使用用户友好的物理单位（mL、°C、RPM），驱动内部负责转换到硬件原始值（步数、Hz、寄存器值）。
+
+## 代码骨架参考
+
+所有设备驱动遵循以下结构：
+
+```python
+import logging
+import time as time_module
+from typing import Dict, Any
+
+try:
+    from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+except ImportError:
+    BaseROS2DeviceNode = None
+
+class MyDevice:
+    _ros_node: "BaseROS2DeviceNode"
+
+    def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
+        if device_id is None and 'id' in kwargs:
+            device_id = kwargs.pop('id')
+        if config is None and 'config' in kwargs:
+            config = kwargs.pop('config')
+        self.device_id = device_id or "unknown_device"
+        self.config = config or {}
+        self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
+        self.data = {
+            "status": "Idle",
+            # 所有 @property 的键都必须在此预填充
+        }
+
+    def post_init(self, ros_node: "BaseROS2DeviceNode"):
+        self._ros_node = ros_node
+
+    async def initialize(self) -> bool:
+        self.data["status"] = "Idle"
+        return True
+
+    async def cleanup(self) -> bool:
+        self.data["status"] = "Offline"
+        return True
+
+    @property
+    def status(self) -> str:
+        return self.data.get("status", "Idle")
+```
+
+## 注册表最小配置
+
+```yaml
+my_device:
+  class:
+    module: unilabos.devices.<category>.<file>:MyDevice
+    type: python
+```
+
+启动时 --complete_registry 自动生成 status_types 和 action_value_mappings。
+
+## 图文件模板
+
+```json
+{
+    "nodes": [
+        {
+            "id": "my_device_1",
+            "name": "设备名称",
+            "children": [],
+            "parent": null,
+            "type": "device",
+            "class": "my_device",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {},
+            "data": {}
+        }
+    ]
+}
+```
+
+## 现有设备接口快照（对齐用）
+
+对齐时参考以下已有设备接口。如果能联网，优先从 GitHub 获取最新版本：
+https://github.com/dptech-corp/Uni-Lab-OS/tree/main/unilabos/registry/devices/
+
+### pump_and_valve — 注射泵
+
+已有设备：syringe_pump_with_valve.runze.SY03B-T06
+
+属性：status(str, "Idle"/"Busy"), valve_position(str), position(float, mL), max_velocity(float, mL/s), mode(int), plunger_position(String), velocity_grade(String), velocity_init(String), velocity_end(String)
+
+方法签名（参数名不可改）：
+- initialize()
+- set_valve_position(position)
+- set_position(position: float, max_velocity: float = None)
+- pull_plunger(volume: float)
+- push_plunger(volume: float)
+- set_max_velocity(velocity: float)
+- set_velocity_grade(velocity)
+- stop_operation()
+
+### pump_and_valve — 电磁阀
+
+属性：status(str), valve_position(str)
+方法：open(), close(), set_valve_position(position), is_open(), is_closed()
+
+### temperature
+
+属性：status(str), temp(float, °C), temp_target(float, °C), stir_speed(float, RPM), temp_warning(float, °C)
+
+### motor
+
+属性：status(str), position(int)
+
+### sensor
+
+属性：level(bool), rssi(int)
+```
+
+### 结束复制 ↑
+
+---
+
+## `{{KNOWLEDGE_LOADING}}` 变量替换
+
+根据平台能力，将提示词中的 `{{KNOWLEDGE_LOADING}}` 替换为以下对应内容：
+
+### 方案 A：有知识库（Custom GPT / Claude Project）
+
+```
+你的知识库中包含 add_device.md 文件，这是完整的设备接入指南。
+执行工作流时，参考该文件获取物模型模板、通信协议代码片段、指令协议模式和常见错误检查清单。
+本提示词中的「现有设备接口快照」和「硬约束」是从指南中提炼的关键内容，以确保即使知识库检索不完整也能正确工作。
+```
+
+### 方案 B：有联网能力
+
+```
+执行工作流前，从以下 URL 获取完整的设备接入指南：
+https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/docs/ai_guides/add_device.md
+
+该指南包含物模型模板、通信协议代码片段、指令协议模式和常见错误检查清单。
+如果无法访问 URL，使用本提示词中内联的「现有设备接口快照」和「代码骨架参考」作为兜底。
+```
+
+### 方案 C：无知识库、无联网
+
+```
+完整的设备接入指南需要用户在对话中提供。
+如果用户未主动提供，请在阶段 1 开始前询问：
+"请将 add_device.md 的内容粘贴到对话中，或上传该文件。如果没有该文件，我将使用内置的精简规则工作。"
+
+本提示词已内联了最关键的内容（硬约束 + 代码骨架 + 接口快照），足以生成基本正确的驱动。
+但完整指南包含更多物模型模板和通信协议代码片段，能显著提升生成质量。
+```
+
+---
+
+## 各平台配置指南
+
+### OpenAI Custom GPT
+
+1. 进入 https://chat.openai.com/gpts/editor
+2. **Name**：Uni-Lab-OS 设备接入助手
+3. **Description**：帮助用户将实验室硬件设备接入 Uni-Lab-OS 系统，自动生成驱动代码、注册表和图文件。
+4. **Instructions**：粘贴上方系统提示词，`{{KNOWLEDGE_LOADING}}` 替换为方案 A
+5. **Knowledge**：上传 `docs/ai_guides/add_device.md`
+6. **Capabilities**：开启 Code Interpreter（用于代码验证）
+7. **Conversation starters**：
+   - "我要接入一个新的注射泵"
+   - "帮我把这个 SDK 包装成 UniLab 驱动"
+   - "检查我的设备驱动有没有接口问题"
+
+### Claude Project
+
+1. 创建新 Project
+2. **Custom Instructions**：粘贴系统提示词，`{{KNOWLEDGE_LOADING}}` 替换为方案 A
+3. **Project Knowledge**：上传 `docs/ai_guides/add_device.md`
+
+### API Agent（LangChain / AutoGen / 自建框架）
+
+```python
+system_prompt = """
+<粘贴完整系统提示词，{{KNOWLEDGE_LOADING}} 替换为方案 B>
+"""
+
+# 如果框架支持工具调用，可注册以下工具：
+tools = [
+    {
+        "name": "fetch_device_guide",
+        "description": "获取最新的 Uni-Lab-OS 设备接入指南",
+        "url": "https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/docs/ai_guides/add_device.md"
+    },
+    {
+        "name": "fetch_registry",
+        "description": "获取最新的设备注册表",
+        "url": "https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/unilabos/registry/devices/{category}.yaml"
+    },
+]
+```
+
+### Cursor Agent Mode
+
+无需使用本模板。Cursor 中使用已有的 `.cursor/skills/add-device/SKILL.md`，它会自动读取 `docs/ai_guides/add_device.md` 并利用 Cursor 的工具能力（Grep 搜索注册表、AskQuestion 收集信息等）。
+
+### 纯网页对话（ChatGPT / Claude 无 Project）
+
+1. 第一条消息粘贴系统提示词（`{{KNOWLEDGE_LOADING}}` 替换为方案 C）
+2. 第二条消息上传或粘贴 `add_device.md`
+3. 第三条消息开始描述设备
+
+---
+
+## 维护说明
+
+- **硬约束更新**：如果 `add_device.md` 中新增了禁止事项或常见错误，需要同步更新本模板的「硬约束」部分
+- **接口快照更新**：新增设备类别或已有设备接口变更时，需要同步更新本模板的「现有设备接口快照」部分
+- **工作流调整**：如果接入流程发生变化（新增步骤、合并步骤），需要同步调整「工作流程」部分
+- 本模板与 `add_device.md` 是**互补关系**：模板定义 Agent 行为，指南提供领域知识。两者独立维护

docs/user_guide/best_practice.md

@@ -452,8 +452,9 @@ unilab --ak your_ak --sk your_sk -g test/experiments/mock_devices/mock_all.json
 **操作步骤：**
 
 1. 将两个 `container` 拖拽到 `workstation` 中
-2. 将 `virtual_transfer_pump` 拖拽到 `workstation` 中
-3. 在画布上连接它们（建立父子关系）
+2. 将 `virtual_multiway_valve` 拖拽到 `workstation` 中
+3. 将 `virtual_transfer_pump` 拖拽到 `workstation` 中
+4. 在画布上连接它们（建立父子关系）
 
 ![设备连接](image/links.png)
 

recipes/msgs/recipe.yaml

@@ -1,6 +1,6 @@
 package:
   name: ros-humble-unilabos-msgs
-  version: 0.10.17
+  version: 0.10.18
 source:
   path: ../../unilabos_msgs
   target_directory: src

recipes/unilabos/recipe.yaml

@@ -1,6 +1,6 @@
 package:
   name: unilabos
-  version: "0.10.17"
+  version: "0.10.18"
 
 source:
   path: ../..

setup.py

@@ -4,7 +4,7 @@ package_name = 'unilabos'
 
 setup(
     name=package_name,
-    version='0.10.17',
+    version='0.10.18',
     packages=find_packages(),
     include_package_data=True,
     install_requires=['setuptools'],

unilabos/__init__.py

@@ -1 +1 @@
-__version__ = "0.10.17"
+__version__ = "0.10.18"

unilabos/app/main.py

@@ -1,6 +1,7 @@
 import argparse
 import asyncio
 import os
+import platform
 import shutil
 import signal
 import sys
@@ -171,6 +172,12 @@ def parse_args():
         action="store_true",
         help="Disable sending update feedback to server",
     )
+    parser.add_argument(
+        "--test_mode",
+        action="store_true",
+        default=False,
+        help="Test mode: all actions simulate execution and return mock results without running real hardware",
+    )
     # workflow upload subcommand
     workflow_parser = subparsers.add_parser(
         "workflow_upload",
@@ -204,6 +211,12 @@ def parse_args():
         default=False,
         help="Whether to publish the workflow (default: False)",
     )
+    workflow_parser.add_argument(
+        "--description",
+        type=str,
+        default="",
+        help="Workflow description, used when publishing the workflow",
+    )
     return parser
 
 
@@ -231,52 +244,60 @@ def main():
     # 加载配置文件，优先加载config，然后从env读取
     config_path = args_dict.get("config")
 
-    if check_mode:
-        args_dict["working_dir"] = os.path.abspath(os.getcwd())
-    # 当 skip_env_check 时，默认使用当前目录作为 working_dir
-    if skip_env_check and not args_dict.get("working_dir") and not config_path:
+    # === 解析 working_dir ===
+    # 规则1: working_dir 传入 → 检测 unilabos_data 子目录，已是则不修改
+    # 规则2: 仅 config_path 传入 → 用其父目录作为 working_dir
+    # 规则4: 两者都传入 → 各用各的，但 working_dir 仍做 unilabos_data 子目录检测
+    raw_working_dir = args_dict.get("working_dir")
+    if raw_working_dir:
+        working_dir = os.path.abspath(raw_working_dir)
+    elif config_path and os.path.exists(config_path):
+        working_dir = os.path.dirname(os.path.abspath(config_path))
+    else:
         working_dir = os.path.abspath(os.getcwd())
-        print_status(f"跳过环境检查模式：使用当前目录作为工作目录 {working_dir}", "info")
-        # 检查当前目录是否有 local_config.py
-        local_config_in_cwd = os.path.join(working_dir, "local_config.py")
-        if os.path.exists(local_config_in_cwd):
-            config_path = local_config_in_cwd
+
+    # unilabos_data 子目录自动检测
+    if os.path.basename(working_dir) != "unilabos_data":
+        unilabos_data_sub = os.path.join(working_dir, "unilabos_data")
+        if os.path.isdir(unilabos_data_sub):
+            working_dir = unilabos_data_sub
+        elif not raw_working_dir and not (config_path and os.path.exists(config_path)):
+            # 未显式指定路径，默认使用 cwd/unilabos_data
+            working_dir = os.path.abspath(os.path.join(os.getcwd(), "unilabos_data"))
+
+    # === 解析 config_path ===
+    if config_path and not os.path.exists(config_path):
+        # config_path 传入但不存在，尝试在 working_dir 中查找
+        candidate = os.path.join(working_dir, "local_config.py")
+        if os.path.exists(candidate):
+            config_path = candidate
+            print_status(f"在工作目录中发现配置文件: {config_path}", "info")
+        else:
+            print_status(
+                f"配置文件 {config_path} 不存在，工作目录 {working_dir} 中也未找到 local_config.py，"
+                f"请通过 --config 传入 local_config.py 文件路径",
+                "error",
+            )
+            os._exit(1)
+    elif not config_path:
+        # 规则3: 未传入 config_path，尝试 working_dir/local_config.py
+        candidate = os.path.join(working_dir, "local_config.py")
+        if os.path.exists(candidate):
+            config_path = candidate
             print_status(f"发现本地配置文件: {config_path}", "info")
         else:
             print_status(f"未指定config路径，可通过 --config 传入 local_config.py 文件路径", "info")
-    elif os.getcwd().endswith("unilabos_data"):
-        working_dir = os.path.abspath(os.getcwd())
-    else:
-        working_dir = os.path.abspath(os.path.join(os.getcwd(), "unilabos_data"))
-
-    if args_dict.get("working_dir"):
-        working_dir = args_dict.get("working_dir", "")
-        if config_path and not os.path.exists(config_path):
-            config_path = os.path.join(working_dir, "local_config.py")
-            if not os.path.exists(config_path):
-                print_status(
-                    f"当前工作目录 {working_dir} 未找到local_config.py，请通过 --config 传入 local_config.py 文件路径",
-                    "error",
+            print_status(f"您是否为第一次使用？并将当前路径 {working_dir} 作为工作目录？ (Y/n)", "info")
+            if check_mode or input() != "n":
+                os.makedirs(working_dir, exist_ok=True)
+                config_path = os.path.join(working_dir, "local_config.py")
+                shutil.copy(
+                    os.path.join(os.path.dirname(os.path.dirname(__file__)), "config", "example_config.py"),
+                    config_path,
                 )
+                print_status(f"已创建 local_config.py 路径： {config_path}", "info")
+            else:
                 os._exit(1)
-    elif config_path and os.path.exists(config_path):
-        working_dir = os.path.dirname(config_path)
-    elif os.path.exists(working_dir) and os.path.exists(os.path.join(working_dir, "local_config.py")):
-        config_path = os.path.join(working_dir, "local_config.py")
-    elif not skip_env_check and not config_path and (
-        not os.path.exists(working_dir) or not os.path.exists(os.path.join(working_dir, "local_config.py"))
-    ):
-        print_status(f"未指定config路径，可通过 --config 传入 local_config.py 文件路径", "info")
-        print_status(f"您是否为第一次使用？并将当前路径 {working_dir} 作为工作目录？ (Y/n)", "info")
-        if input() != "n":
-            os.makedirs(working_dir, exist_ok=True)
-            config_path = os.path.join(working_dir, "local_config.py")
-            shutil.copy(
-                os.path.join(os.path.dirname(os.path.dirname(__file__)), "config", "example_config.py"), config_path
-            )
-            print_status(f"已创建 local_config.py 路径： {config_path}", "info")
-        else:
-            os._exit(1)
 
     # 加载配置文件 (check_mode 跳过)
     print_status(f"当前工作目录为 {working_dir}", "info")
@@ -288,7 +309,9 @@ def main():
 
     if hasattr(BasicConfig, "log_level"):
         logger.info(f"Log level set to '{BasicConfig.log_level}' from config file.")
-    configure_logger(loglevel=BasicConfig.log_level, working_dir=working_dir)
+    file_path = configure_logger(loglevel=BasicConfig.log_level, working_dir=working_dir)
+    if file_path is not None:
+        logger.info(f"[LOG_FILE] {file_path}")
 
     if args.addr != parser.get_default("addr"):
         if args.addr == "test":
@@ -332,8 +355,11 @@ def main():
     BasicConfig.slave_no_host = args_dict.get("slave_no_host", False)
     BasicConfig.upload_registry = args_dict.get("upload_registry", False)
     BasicConfig.no_update_feedback = args_dict.get("no_update_feedback", False)
+    BasicConfig.test_mode = args_dict.get("test_mode", False)
+    if BasicConfig.test_mode:
+        print_status("启用测试模式：所有动作将模拟执行，不调用真实硬件", "warning")
     BasicConfig.communication_protocol = "websocket"
-    machine_name = os.popen("hostname").read().strip()
+    machine_name = platform.node()
     machine_name = "".join([c if c.isalnum() or c == "_" else "_" for c in machine_name])
     BasicConfig.machine_name = machine_name
     BasicConfig.vis_2d_enable = args_dict["2d_vis"]

unilabos/app/model.py

@@ -54,6 +54,7 @@ class JobAddReq(BaseModel):
     action_type: str = Field(
         examples=["unilabos_msgs.action._str_single_input.StrSingleInput"], description="action type", default=""
     )
+    sample_material: dict = Field(examples=[{"string": "string"}], description="sample uuid to material uuid")
     action_args: dict = Field(examples=[{"string": "string"}], description="action arguments", default_factory=dict)
     task_id: str = Field(examples=["task_id"], description="task uuid (auto-generated if empty)", default="")
     job_id: str = Field(examples=["job_id"], description="goal uuid (auto-generated if empty)", default="")

unilabos/app/register.py

@@ -38,9 +38,9 @@ def register_devices_and_resources(lab_registry, gather_only=False) -> Optional[
             response = http_client.resource_registry({"resources": list(devices_to_register.values())})
             cost_time = time.time() - start_time
             if response.status_code in [200, 201]:
-                logger.info(f"[UniLab Register] 成功注册 {len(devices_to_register)} 个设备 {cost_time}ms")
+                logger.info(f"[UniLab Register] 成功注册 {len(devices_to_register)} 个设备 {cost_time}s")
             else:
-                logger.error(f"[UniLab Register] 设备注册失败: {response.status_code}, {response.text} {cost_time}ms")
+                logger.error(f"[UniLab Register] 设备注册失败: {response.status_code}, {response.text} {cost_time}s")
         except Exception as e:
             logger.error(f"[UniLab Register] 设备注册异常: {e}")
 
@@ -51,9 +51,9 @@ def register_devices_and_resources(lab_registry, gather_only=False) -> Optional[
             response = http_client.resource_registry({"resources": list(resources_to_register.values())})
             cost_time = time.time() - start_time
             if response.status_code in [200, 201]:
-                logger.info(f"[UniLab Register] 成功注册 {len(resources_to_register)} 个资源 {cost_time}ms")
+                logger.info(f"[UniLab Register] 成功注册 {len(resources_to_register)} 个资源 {cost_time}s")
             else:
-                logger.error(f"[UniLab Register] 资源注册失败: {response.status_code}, {response.text} {cost_time}ms")
+                logger.error(f"[UniLab Register] 资源注册失败: {response.status_code}, {response.text} {cost_time}s")
         except Exception as e:
             logger.error(f"[UniLab Register] 资源注册异常: {e}")
 

unilabos/app/web/client.py

@@ -3,7 +3,7 @@ HTTP客户端模块
 
 提供与远程服务器通信的客户端功能，只有host需要用
 """
-
+import gzip
 import json
 import os
 from typing import List, Dict, Any, Optional
@@ -290,10 +290,17 @@ class HTTPClient:
         Returns:
             Response: API响应对象
         """
+        compressed_body = gzip.compress(
+            json.dumps(registry_data, ensure_ascii=False, default=str).encode("utf-8")
+        )
         response = requests.post(
             f"{self.remote_addr}/lab/resource",
-            json=registry_data,
-            headers={"Authorization": f"Lab {self.auth}"},
+            data=compressed_body,
+            headers={
+                "Authorization": f"Lab {self.auth}",
+                "Content-Type": "application/json",
+                "Content-Encoding": "gzip",
+            },
             timeout=30,
         )
         if response.status_code not in [200, 201]:
@@ -343,9 +350,10 @@ class HTTPClient:
         edges: List[Dict[str, Any]],
         tags: Optional[List[str]] = None,
         published: bool = False,
+        description: str = "",
     ) -> Dict[str, Any]:
         """
-        导入工作流到服务器
+        导入工作流到服务器，如果 published 为 True，则额外发起发布请求
 
         Args:
             name: 工作流名称（顶层）
@@ -355,6 +363,7 @@ class HTTPClient:
             edges: 工作流边列表
             tags: 工作流标签列表，默认为空列表
             published: 是否发布工作流，默认为False
+            description: 工作流描述，发布时使用
 
         Returns:
             Dict: API响应数据，包含 code 和 data (uuid, name)
@@ -367,7 +376,6 @@ class HTTPClient:
                 "nodes": nodes,
                 "edges": edges,
                 "tags": tags if tags is not None else [],
-                "published": published,
             },
         }
         # 保存请求到文件
@@ -388,11 +396,51 @@ class HTTPClient:
             res = response.json()
             if "code" in res and res["code"] != 0:
                 logger.error(f"导入工作流失败: {response.text}")
+                return res
+            # 导入成功后，如果需要发布则额外发起发布请求
+            if published:
+                imported_uuid = res.get("data", {}).get("uuid", workflow_uuid)
+                publish_res = self.workflow_publish(imported_uuid, description)
+                res["publish_result"] = publish_res
             return res
         else:
             logger.error(f"导入工作流失败: {response.status_code}, {response.text}")
             return {"code": response.status_code, "message": response.text}
 
+    def workflow_publish(self, workflow_uuid: str, description: str = "") -> Dict[str, Any]:
+        """
+        发布工作流
+
+        Args:
+            workflow_uuid: 工作流UUID
+            description: 工作流描述
+
+        Returns:
+            Dict: API响应数据
+        """
+        payload = {
+            "uuid": workflow_uuid,
+            "description": description,
+            "published": True,
+        }
+        logger.info(f"正在发布工作流: {workflow_uuid}")
+        response = requests.patch(
+            f"{self.remote_addr}/lab/workflow/owner",
+            json=payload,
+            headers={"Authorization": f"Lab {self.auth}"},
+            timeout=60,
+        )
+        if response.status_code == 200:
+            res = response.json()
+            if "code" in res and res["code"] != 0:
+                logger.error(f"发布工作流失败: {response.text}")
+            else:
+                logger.info(f"工作流发布成功: {workflow_uuid}")
+            return res
+        else:
+            logger.error(f"发布工作流失败: {response.status_code}, {response.text}")
+            return {"code": response.status_code, "message": response.text}
+
 
 # 创建默认客户端实例
 http_client = HTTPClient()

unilabos/app/web/controller.py

@@ -327,6 +327,7 @@ def job_add(req: JobAddReq) -> JobData:
             queue_item,
             action_type=action_type,
             action_kwargs=action_args,
+            sample_material=req.sample_material,
             server_info=server_info,
         )
 

unilabos/app/ws_client.py

@@ -76,6 +76,7 @@ class JobInfo:
     start_time: float
     last_update_time: float = field(default_factory=time.time)
     ready_timeout: Optional[float] = None  # READY状态的超时时间
+    always_free: bool = False  # 是否为永久闲置动作(不受排队限制)
 
     def update_timestamp(self):
         """更新最后更新时间"""
@@ -127,6 +128,15 @@ class DeviceActionManager:
             # 总是将job添加到all_jobs中
             self.all_jobs[job_info.job_id] = job_info
 
+            # always_free的动作不受排队限制，直接设为READY
+            if job_info.always_free:
+                job_info.status = JobStatus.READY
+                job_info.update_timestamp()
+                job_info.set_ready_timeout(10)
+                job_log = format_job_log(job_info.job_id, job_info.task_id, job_info.device_id, job_info.action_name)
+                logger.trace(f"[DeviceActionManager] Job {job_log} always_free, start immediately")
+                return True
+
             # 检查是否有正在执行或准备执行的任务
             if device_key in self.active_jobs:
                 # 有正在执行或准备执行的任务，加入队列
@@ -176,11 +186,15 @@ class DeviceActionManager:
                 logger.error(f"[DeviceActionManager] Job {job_log} is not in READY status, current: {job_info.status}")
                 return False
 
-            # 检查设备上是否是这个job
-            if device_key not in self.active_jobs or self.active_jobs[device_key].job_id != job_id:
-                job_log = format_job_log(job_info.job_id, job_info.task_id, job_info.device_id, job_info.action_name)
-                logger.error(f"[DeviceActionManager] Job {job_log} is not the active job for {device_key}")
-                return False
+            # always_free的job不需要检查active_jobs
+            if not job_info.always_free:
+                # 检查设备上是否是这个job
+                if device_key not in self.active_jobs or self.active_jobs[device_key].job_id != job_id:
+                    job_log = format_job_log(
+                        job_info.job_id, job_info.task_id, job_info.device_id, job_info.action_name
+                    )
+                    logger.error(f"[DeviceActionManager] Job {job_log} is not the active job for {device_key}")
+                    return False
 
             # 开始执行任务，将状态从READY转换为STARTED
             job_info.status = JobStatus.STARTED
@@ -203,6 +217,13 @@ class DeviceActionManager:
             job_info = self.all_jobs[job_id]
             device_key = job_info.device_action_key
 
+            # always_free的job直接清理，不影响队列
+            if job_info.always_free:
+                job_info.status = JobStatus.ENDED
+                job_info.update_timestamp()
+                del self.all_jobs[job_id]
+                return None
+
             # 移除活跃任务
             if device_key in self.active_jobs and self.active_jobs[device_key].job_id == job_id:
                 del self.active_jobs[device_key]
@@ -234,9 +255,14 @@ class DeviceActionManager:
             return None
 
     def get_active_jobs(self) -> List[JobInfo]:
-        """获取所有正在执行的任务"""
+        """获取所有正在执行的任务(含active_jobs和always_free的STARTED job)"""
         with self.lock:
-            return list(self.active_jobs.values())
+            jobs = list(self.active_jobs.values())
+            # 补充 always_free 的 STARTED job(它们不在 active_jobs 中)
+            for job in self.all_jobs.values():
+                if job.always_free and job.status == JobStatus.STARTED and job not in jobs:
+                    jobs.append(job)
+            return jobs
 
     def get_queued_jobs(self) -> List[JobInfo]:
         """获取所有排队中的任务"""
@@ -261,6 +287,14 @@ class DeviceActionManager:
             job_info = self.all_jobs[job_id]
             device_key = job_info.device_action_key
 
+            # always_free的job直接清理
+            if job_info.always_free:
+                job_info.status = JobStatus.ENDED
+                del self.all_jobs[job_id]
+                job_log = format_job_log(job_info.job_id, job_info.task_id, job_info.device_id, job_info.action_name)
+                logger.trace(f"[DeviceActionManager] Always-free job {job_log} cancelled")
+                return True
+
             # 如果是正在执行的任务
             if device_key in self.active_jobs and self.active_jobs[device_key].job_id == job_id:
                 # 清理active job状态
@@ -334,13 +368,18 @@ class DeviceActionManager:
         timeout_jobs = []
 
         with self.lock:
-            # 统计READY状态的任务数量
-            ready_jobs_count = sum(1 for job in self.active_jobs.values() if job.status == JobStatus.READY)
+            # 收集所有需要检查的 READY 任务(active_jobs + always_free READY jobs)
+            ready_candidates = list(self.active_jobs.values())
+            for job in self.all_jobs.values():
+                if job.always_free and job.status == JobStatus.READY and job not in ready_candidates:
+                    ready_candidates.append(job)
+
+            ready_jobs_count = sum(1 for job in ready_candidates if job.status == JobStatus.READY)
             if ready_jobs_count > 0:
                 logger.trace(f"[DeviceActionManager] Checking {ready_jobs_count} READY jobs for timeout")  # type: ignore  # noqa: E501
 
             # 找到所有超时的READY任务（只检测，不处理）
-            for job_info in self.active_jobs.values():
+            for job_info in ready_candidates:
                 if job_info.is_ready_timeout():
                     timeout_jobs.append(job_info)
                     job_log = format_job_log(
@@ -427,6 +466,7 @@ class MessageProcessor:
                 async with websockets.connect(
                     self.websocket_url,
                     ssl=ssl_context,
+                    open_timeout=20,
                     ping_interval=WSConfig.ping_interval,
                     ping_timeout=10,
                     additional_headers={
@@ -458,6 +498,18 @@ class MessageProcessor:
             except websockets.exceptions.ConnectionClosed:
                 logger.warning("[MessageProcessor] Connection closed")
                 self.connected = False
+            except TimeoutError:
+                logger.warning(
+                    f"[MessageProcessor] Connection timeout (attempt {self.reconnect_count + 1}), "
+                    f"server may be temporarily unavailable"
+                )
+                self.connected = False
+            except websockets.exceptions.InvalidStatus as e:
+                logger.warning(
+                    f"[MessageProcessor] Server returned unexpected HTTP status {e.response.status_code}, "
+                    f"WebSocket endpoint may not be ready yet"
+                )
+                self.connected = False
             except Exception as e:
                 logger.error(f"[MessageProcessor] Connection error: {str(e)}")
                 logger.error(traceback.format_exc())
@@ -466,18 +518,19 @@ class MessageProcessor:
                 self.websocket = None
 
             # 重连逻辑
-            if self.is_running and self.reconnect_count < WSConfig.max_reconnect_attempts:
+            if not self.is_running:
+                break
+            if self.reconnect_count < WSConfig.max_reconnect_attempts:
                 self.reconnect_count += 1
+                backoff = min(WSConfig.reconnect_interval * (2 ** (self.reconnect_count - 1)), 60)
                 logger.info(
-                    f"[MessageProcessor] Reconnecting in {WSConfig.reconnect_interval}s "
+                    f"[MessageProcessor] Reconnecting in {backoff}s "
                     f"(attempt {self.reconnect_count}/{WSConfig.max_reconnect_attempts})"
                 )
-                await asyncio.sleep(WSConfig.reconnect_interval)
-            elif self.reconnect_count >= WSConfig.max_reconnect_attempts:
+                await asyncio.sleep(backoff)
+            else:
                 logger.error("[MessageProcessor] Max reconnection attempts reached")
                 break
-            else:
-                self.reconnect_count -= 1
 
     async def _message_handler(self):
         """处理接收到的消息"""
@@ -545,7 +598,7 @@ class MessageProcessor:
                         try:
                             message_str = json.dumps(msg, ensure_ascii=False)
                             await self.websocket.send(message_str)
-                            logger.trace(f"[MessageProcessor] Message sent: {msg.get('action', 'unknown')}")  # type: ignore  # noqa: E501
+                            # logger.trace(f"[MessageProcessor] Message sent: {msg.get('action', 'unknown')}")  # type: ignore  # noqa: E501
                         except Exception as e:
                             logger.error(f"[MessageProcessor] Failed to send message: {str(e)}")
                             logger.error(traceback.format_exc())
@@ -608,6 +661,24 @@ class MessageProcessor:
         if host_node:
             host_node.handle_pong_response(pong_data)
 
+    def _check_action_always_free(self, device_id: str, action_name: str) -> bool:
+        """检查该action是否标记为always_free，通过HostNode统一的_action_value_mappings查找"""
+        try:
+            host_node = HostNode.get_instance(0)
+            if not host_node:
+                return False
+            # noinspection PyProtectedMember
+            action_mappings = host_node._action_value_mappings.get(device_id)
+            if not action_mappings:
+                return False
+            # 尝试直接匹配或 auto- 前缀匹配
+            for key in [action_name, f"auto-{action_name}"]:
+                if key in action_mappings:
+                    return action_mappings[key].get("always_free", False)
+            return False
+        except Exception:
+            return False
+
     async def _handle_query_action_state(self, data: Dict[str, Any]):
         """处理query_action_state消息"""
         device_id = data.get("device_id", "")
@@ -622,6 +693,9 @@ class MessageProcessor:
 
         device_action_key = f"/devices/{device_id}/{action_name}"
 
+        # 检查action是否为always_free
+        action_always_free = self._check_action_always_free(device_id, action_name)
+
         # 创建任务信息
         job_info = JobInfo(
             job_id=job_id,
@@ -631,6 +705,7 @@ class MessageProcessor:
             device_action_key=device_action_key,
             status=JobStatus.QUEUE,
             start_time=time.time(),
+            always_free=action_always_free,
         )
 
         # 添加到设备管理器
@@ -657,6 +732,8 @@ class MessageProcessor:
     async def _handle_job_start(self, data: Dict[str, Any]):
         """处理job_start消息"""
         try:
+            if not data.get("sample_material"):
+                data["sample_material"] = {}
             req = JobAddReq(**data)
 
             job_log = format_job_log(req.job_id, req.task_id, req.device_id, req.action)
@@ -688,6 +765,7 @@ class MessageProcessor:
                 queue_item,
                 action_type=req.action_type,
                 action_kwargs=req.action_args,
+                sample_material=req.sample_material,
                 server_info=req.server_info,
             )
 
@@ -1120,6 +1198,11 @@ class QueueProcessor:
         logger.debug(f"[QueueProcessor] Sending busy status for {len(queued_jobs)} queued jobs")
 
         for job_info in queued_jobs:
+            # 快照可能已过期：在遍历过程中 end_job() 可能已将此 job 移至 READY，
+            # 此时不应再发送 busy/need_more，否则会覆盖已发出的 free=True 通知
+            if job_info.status != JobStatus.QUEUE:
+                continue
+
             message = {
                 "action": "report_action_state",
                 "data": {
@@ -1301,7 +1384,7 @@ class WebSocketClient(BaseCommunicationClient):
             },
         }
         self.message_processor.send_message(message)
-        logger.trace(f"[WebSocketClient] Device status published: {device_id}.{property_name}")
+        # logger.trace(f"[WebSocketClient] Device status published: {device_id}.{property_name}")
 
     def publish_job_status(
         self, feedback_data: dict, item: QueueItem, status: str, return_info: Optional[dict] = None

unilabos/compile/pump_protocol.py

@@ -95,8 +95,29 @@ def get_vessel_liquid_volume(G: nx.DiGraph, vessel: str) -> float:
     return total_volume
 
 
-def is_integrated_pump(node_name):
-    return "pump" in node_name and "valve" in node_name
+def is_integrated_pump(node_class: str, node_name: str = "") -> bool:
+    """
+    判断是否为泵阀一体设备
+    """
+    class_lower = (node_class or "").lower()
+    name_lower = (node_name or "").lower()
+
+    if "pump" not in class_lower and "pump" not in name_lower:
+        return False
+
+    integrated_markers = [
+        "valve",
+        "pump_valve",
+        "pumpvalve",
+        "integrated",
+        "transfer_pump",
+    ]
+
+    for marker in integrated_markers:
+        if marker in class_lower or marker in name_lower:
+            return True
+
+    return False
 
 
 def find_connected_pump(G, valve_node):
@@ -186,7 +207,9 @@ def build_pump_valve_maps(G, pump_backbone):
     debug_print(f"🔧 过滤后的骨架: {filtered_backbone}")
 
     for node in filtered_backbone:
-        if is_integrated_pump(G.nodes[node]["class"]):
+        node_data = G.nodes.get(node, {})
+        node_class = node_data.get("class", "") or ""
+        if is_integrated_pump(node_class, node):
             pumps_from_node[node] = node
             valve_from_node[node] = node
             debug_print(f"  - 集成泵-阀: {node}")

unilabos/config/config.py

@@ -23,6 +23,7 @@ class BasicConfig:
     disable_browser = False  # 禁止浏览器自动打开
     port = 8002  # 本地HTTP服务
     check_mode = False  # CI 检查模式，用于验证 registry 导入和文件一致性
+    test_mode = False  # 测试模式，所有动作不实际执行，返回模拟结果
     # 'TRACE', 'DEBUG', 'INFO', 'WARNING', 'ERROR', 'CRITICAL'
     log_level: Literal["TRACE", "DEBUG", "INFO", "WARNING", "ERROR", "CRITICAL"] = "DEBUG"
 
@@ -145,5 +146,5 @@ def load_config(config_path=None):
             traceback.print_exc()
             exit(1)
     else:
-        config_path = os.path.join(os.path.dirname(__file__), "local_config.py")
+        config_path = os.path.join(os.path.dirname(__file__), "example_config.py")
         load_config(config_path)

unilabos/devices/liquid_handling/liquid_handler_abstract.py

@@ -1,15 +1,11 @@
 from __future__ import annotations
 
-import asyncio
 import time
 import traceback
 from collections import Counter
 from typing import List, Sequence, Optional, Literal, Union, Iterator, Dict, Any, Callable, Set, cast
 
-from typing_extensions import TypedDict
 from pylabrobot.liquid_handling import LiquidHandler, LiquidHandlerBackend, LiquidHandlerChatterboxBackend, Strictness
-from unilabos.devices.liquid_handling.rviz_backend import UniLiquidHandlerRvizBackend
-from unilabos.devices.liquid_handling.laiyu.backend.laiyu_v_backend import UniLiquidHandlerLaiyuBackend
 from pylabrobot.liquid_handling.liquid_handler import TipPresenceProbingMethod
 from pylabrobot.liquid_handling.standard import GripDirection
 from pylabrobot.resources import (
@@ -25,17 +21,41 @@ from pylabrobot.resources import (
     ResourceHolder,
     Lid,
     Trash,
-    Tip,
+    Tip, TubeRack,
 )
+from typing_extensions import TypedDict
 
+from unilabos.devices.liquid_handling.rviz_backend import UniLiquidHandlerRvizBackend
 from unilabos.registry.placeholder_type import ResourceSlot
-from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
-from unilabos.resources.resource_tracker import ResourceTreeSet
+from unilabos.resources.resource_tracker import (
+    ResourceTreeSet,
+    ResourceDict,
+    EXTRA_SAMPLE_UUID,
+    EXTRA_UNILABOS_SAMPLE_UUID,
+)
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode, ROS2DeviceNode
 
 
 class SimpleReturn(TypedDict):
-    samples: list
-    volumes: list
+    samples: List[List[ResourceDict]]
+    volumes: List[float]
+
+
+class SetLiquidReturn(TypedDict):
+    wells: List[List[ResourceDict]]
+    volumes: List[float]
+
+
+class SetLiquidFromPlateReturn(TypedDict):
+    plate: List[List[ResourceDict]]
+    wells: List[List[ResourceDict]]
+    volumes: List[float]
+
+
+class TransferLiquidReturn(TypedDict):
+    sources: List[List[ResourceDict]]
+    targets: List[List[ResourceDict]]
+
 
 
 class SetLiquidReturn(TypedDict):
@@ -228,12 +248,11 @@ class LiquidHandlerMiddleware(LiquidHandler):
         res_samples = []
         res_volumes = []
         for resource, volume, channel in zip(resources, vols, use_channels):
-            res_samples.append(
-                {"name": resource.name, "sample_uuid": resource.unilabos_extra.get("sample_uuid", None)}
-            )
+            sample_uuid_value = resource.unilabos_extra.get(EXTRA_SAMPLE_UUID, None)
+            res_samples.append({"name": resource.name, EXTRA_SAMPLE_UUID: sample_uuid_value})
             res_volumes.append(volume)
             self.pending_liquids_dict[channel] = {
-                "sample_uuid": resource.unilabos_extra.get("sample_uuid", None),
+                EXTRA_SAMPLE_UUID: sample_uuid_value,
                 "volume": volume,
             }
         return SimpleReturn(samples=res_samples, volumes=res_volumes)
@@ -275,10 +294,10 @@ class LiquidHandlerMiddleware(LiquidHandler):
         res_samples = []
         res_volumes = []
         for resource, volume, channel in zip(resources, vols, use_channels):
-            res_uuid = self.pending_liquids_dict[channel]["sample_uuid"]
+            res_uuid = self.pending_liquids_dict[channel][EXTRA_SAMPLE_UUID]
             self.pending_liquids_dict[channel]["volume"] -= volume
-            resource.unilabos_extra["sample_uuid"] = res_uuid
-            res_samples.append({"name": resource.name, "sample_uuid": res_uuid})
+            resource.unilabos_extra[EXTRA_SAMPLE_UUID] = res_uuid
+            res_samples.append({"name": resource.name, EXTRA_SAMPLE_UUID: res_uuid})
             res_volumes.append(volume)
 
         return SimpleReturn(samples=res_samples, volumes=res_volumes)
@@ -682,16 +701,20 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
             wells=ResourceTreeSet.from_plr_resources(wells, known_newly_created=False).dump(), volumes=res_volumes  # type: ignore
         )
 
-    @classmethod
     def set_liquid_from_plate(
-        cls, plate: ResourceSlot, well_names: list[str], liquid_names: list[str], volumes: list[float]
+        self, plate: ResourceSlot, well_names: list[str], liquid_names: list[str], volumes: list[float]
     ) -> SetLiquidFromPlateReturn:
         """Set the liquid in wells of a plate by well names (e.g., A1, A2, B3).
 
         如果 liquid_names 和 volumes 为空，但 plate 和 well_names 不为空，直接返回 plate 和 wells。
         """
+        assert issubclass(plate.__class__, Plate) or issubclass(plate.__class__, TubeRack) , f"plate must be a Plate, now: {type(plate)}"
+        plate: Union[Plate, TubeRack]
         # 根据 well_names 获取对应的 Well 对象
-        wells = [plate.get_well(name) for name in well_names]
+        if issubclass(plate.__class__, Plate):
+            wells = [plate.get_well(name) for name in well_names]
+        elif issubclass(plate.__class__, TubeRack):
+            wells = [plate.get_tube(name) for name in well_names]
         res_volumes = []
 
         # 如果 liquid_names 和 volumes 都为空，直接返回
@@ -706,6 +729,14 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
             well.set_liquids([(liquid_name, volume)])  # type: ignore
             res_volumes.append(volume)
 
+        task = ROS2DeviceNode.run_async_func(self._ros_node.update_resource, True, **{"resources": wells})
+        submit_time = time.time()
+        while not task.done():
+            if time.time() - submit_time > 10:
+                self._ros_node.lab_logger().info(f"set_liquid_from_plate {plate} 超时")
+                break
+            time.sleep(0.01)
+
         return SetLiquidFromPlateReturn(
             plate=ResourceTreeSet.from_plr_resources([plate], known_newly_created=False).dump(),  # type: ignore
             wells=ResourceTreeSet.from_plr_resources(wells, known_newly_created=False).dump(),  # type: ignore
@@ -1111,7 +1142,7 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
         mix_liquid_height: Optional[float] = None,
         delays: Optional[List[int]] = None,
         none_keys: List[str] = [],
-    ):
+    ) -> TransferLiquidReturn:
         """Transfer liquid with automatic mode detection.
 
         Supports three transfer modes:
@@ -1251,6 +1282,11 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
                 "Supported modes: 1->N, N->1, or N->N."
             )
 
+        return TransferLiquidReturn(
+            sources=ResourceTreeSet.from_plr_resources(list(sources), known_newly_created=False).dump(),  # type: ignore
+            targets=ResourceTreeSet.from_plr_resources(list(targets), known_newly_created=False).dump(),  # type: ignore
+        )
+
     async def _transfer_one_to_one(
         self,
         sources: Sequence[Container],

unilabos/devices/liquid_handling/prcxi/prcxi.py

@@ -52,8 +52,10 @@ from unilabos.devices.liquid_handling.liquid_handler_abstract import (
     SimpleReturn,
     SetLiquidReturn,
     SetLiquidFromPlateReturn,
+    TransferLiquidReturn,
 )
 from unilabos.registry.placeholder_type import ResourceSlot
+from unilabos.resources.resource_tracker import ResourceTreeSet
 from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
 
 
@@ -89,20 +91,103 @@ class PRCXI9300Deck(Deck):
     该类定义了 PRCXI 9300 的工作台布局和槽位信息。
     """
 
-    def __init__(self, name: str, size_x: float, size_y: float, size_z: float, **kwargs):
-        super().__init__(name, size_x, size_y, size_z)
-        self.slots = [None] * 16  # PRCXI 9300/9320 最大有 16 个槽位
-        self.slot_locations = [Coordinate(0, 0, 0)] * 16
+    # T1-T16 默认位置 (4列×4行)
+    _DEFAULT_SITE_POSITIONS = [
+        (0, 0, 0), (138, 0, 0), (276, 0, 0), (414, 0, 0),         # T1-T4
+        (0, 96, 0), (138, 96, 0), (276, 96, 0), (414, 96, 0),     # T5-T8
+        (0, 192, 0), (138, 192, 0), (276, 192, 0), (414, 192, 0), # T9-T12
+        (0, 288, 0), (138, 288, 0), (276, 288, 0), (414, 288, 0), # T13-T16
+    ]
+    _DEFAULT_SITE_SIZE = {"width": 128.0, "height": 86, "depth": 0}
+    _DEFAULT_CONTENT_TYPE = ["plate", "tip_rack", "plates", "tip_racks", "tube_rack", "adaptor"]
+
+    def __init__(self, name: str, size_x: float, size_y: float, size_z: float,
+                 sites: Optional[List[Dict[str, Any]]] = None, **kwargs):
+        super().__init__(size_x, size_y, size_z, name)
+        if sites is not None:
+            self.sites: List[Dict[str, Any]] = [dict(s) for s in sites]
+        else:
+            self.sites = []
+            for i, (x, y, z) in enumerate(self._DEFAULT_SITE_POSITIONS):
+                self.sites.append({
+                    "label": f"T{i + 1}",
+                    "visible": True,
+                    "position": {"x": x, "y": y, "z": z},
+                    "size": dict(self._DEFAULT_SITE_SIZE),
+                    "content_type": list(self._DEFAULT_CONTENT_TYPE),
+                })
+        # _ordering: label -> None, 用于外部通过 list(keys()).index(site) 将 Tn 转换为 spot index
+        self._ordering = collections.OrderedDict(
+            (site["label"], None) for site in self.sites
+        )
+
+    def _get_site_location(self, idx: int) -> Coordinate:
+        pos = self.sites[idx]["position"]
+        return Coordinate(pos["x"], pos["y"], pos["z"])
+
+    def _get_site_resource(self, idx: int) -> Optional[Resource]:
+        site_loc = self._get_site_location(idx)
+        for child in self.children:
+            if child.location == site_loc:
+                return child
+        return None
+
+    def assign_child_resource(
+        self,
+        resource: Resource,
+        location: Optional[Coordinate] = None,
+        reassign: bool = True,
+        spot: Optional[int] = None,
+    ):
+        idx = spot
+        if spot is not None:
+            idx = spot
+        else:
+            for i, site in enumerate(self.sites):
+                site_loc = self._get_site_location(i)
+                if site.get("label") == resource.name:
+                    idx = i
+                    break
+                if location is not None and site_loc == location:
+                    idx = i
+                    break
+
+        if idx is None:
+            for i in range(len(self.sites)):
+                if self._get_site_resource(i) is None:
+                    idx = i
+                    break
+
+        if idx is None:
+            raise ValueError(f"No available site on deck '{self.name}' for resource '{resource.name}'")
+
+        if not reassign and self._get_site_resource(idx) is not None:
+            raise ValueError(f"Site {idx} ('{self.sites[idx]['label']}') is already occupied")
+
+        loc = self._get_site_location(idx)
+        super().assign_child_resource(resource, location=loc, reassign=reassign)
 
     def assign_child_at_slot(self, resource: Resource, slot: int, reassign: bool = False) -> None:
-        if self.slots[slot - 1] is not None and not reassign:
-            raise ValueError(f"Spot {slot} is already occupied")
+        self.assign_child_resource(resource, spot=slot - 1, reassign=reassign)
 
-        self.slots[slot - 1] = resource
-        super().assign_child_resource(resource, location=self.slot_locations[slot - 1])
+    def serialize(self) -> dict:
+        data = super().serialize()
+        sites_out = []
+        for i, site in enumerate(self.sites):
+            occupied = self._get_site_resource(i)
+            sites_out.append({
+                "label": site["label"],
+                "visible": site.get("visible", True),
+                "occupied_by": occupied.name if occupied is not None else None,
+                "position": site["position"],
+                "size": site["size"],
+                "content_type": site["content_type"],
+            })
+        data["sites"] = sites_out
+        return data
 
 
-class PRCXI9300Container(Plate):
+class PRCXI9300Container(Container):
     """PRCXI 9300 的专用 Container 类，继承自 Plate，用于槽位定位和未知模块。
 
     该类定义了 PRCXI 9300 的工作台布局和槽位信息。
@@ -115,11 +200,10 @@ class PRCXI9300Container(Plate):
         size_y: float,
         size_z: float,
         category: str,
-        ordering: collections.OrderedDict,
         model: Optional[str] = None,
         **kwargs,
     ):
-        super().__init__(name, size_x, size_y, size_z, category=category, ordering=ordering, model=model)
+        super().__init__(name, size_x, size_y, size_z, category=category, model=model)
         self._unilabos_state = {}
 
     def load_state(self, state: Dict[str, Any]) -> None:
@@ -154,25 +238,29 @@ class PRCXI9300Plate(Plate):
         **kwargs,
     ):
         # 如果 ordered_items 不为 None，直接使用
+        items = None
+        ordering_param = None
         if ordered_items is not None:
             items = ordered_items
         elif ordering is not None:
             # 检查 ordering 中的值是否是字符串（从 JSON 反序列化时的情况）
             # 如果是字符串，说明这是位置名称，需要让 Plate 自己创建 Well 对象
             # 我们只传递位置信息（键），不传递值，使用 ordering 参数
-            if ordering and isinstance(next(iter(ordering.values()), None), str):
-                # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
-                # 传递 ordering 参数而不是 ordered_items，让 Plate 自己创建 Well 对象
-                items = None
-                # 使用 ordering 参数，只包含位置信息（键）
-                ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
+            if ordering:
+                values = list(ordering.values())
+                value = values[0]
+                if isinstance(value, str):
+                    # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
+                    # 传递 ordering 参数而不是 ordered_items，让 Plate 自己创建 Well 对象
+                    items = None
+                    # 使用 ordering 参数，只包含位置信息（键）
+                    ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
+                elif value is None:
+                    ordering_param = ordering
             else:
                 # ordering 的值已经是对象，可以直接使用
                 items = ordering
                 ordering_param = None
-        else:
-            items = None
-            ordering_param = None
 
         # 根据情况传递不同的参数
         if items is not None:
@@ -243,14 +331,15 @@ class PRCXI9300TipRack(TipRack):
         if ordered_items is not None:
             items = ordered_items
         elif ordering is not None:
-            # 检查 ordering 中的值是否是字符串（从 JSON 反序列化时的情况）
-            # 如果是字符串，说明这是位置名称，需要让 TipRack 自己创建 Tip 对象
-            # 我们只传递位置信息（键），不传递值，使用 ordering 参数
-            if ordering and isinstance(next(iter(ordering.values()), None), str):
-                # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
+            # 检查 ordering 中的值类型来决定如何处理：
+            # - 字符串值（从 JSON 反序列化）: 只用键创建 ordering_param
+            # - None 值（从第二次往返序列化）: 同样只用键创建 ordering_param
+            # - 对象值（已经是实际的 Resource 对象）: 直接作为 ordered_items 使用
+            first_val = next(iter(ordering.values()), None) if ordering else None
+            if not ordering or first_val is None or isinstance(first_val, str):
+                # ordering 的值是字符串或 None，只使用键（位置信息）创建新的 OrderedDict
                 # 传递 ordering 参数而不是 ordered_items，让 TipRack 自己创建 Tip 对象
                 items = None
-                # 使用 ordering 参数，只包含位置信息（键）
                 ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
             else:
                 # ordering 的值已经是对象，可以直接使用
@@ -392,14 +481,15 @@ class PRCXI9300TubeRack(TubeRack):
             items_to_pass = ordered_items
             ordering_param = None
         elif ordering is not None:
-            # 检查 ordering 中的值是否是字符串（从 JSON 反序列化时的情况）
-            # 如果是字符串，说明这是位置名称，需要让 TubeRack 自己创建 Tube 对象
-            # 我们只传递位置信息（键），不传递值，使用 ordering 参数
-            if ordering and isinstance(next(iter(ordering.values()), None), str):
-                # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
+            # 检查 ordering 中的值类型来决定如何处理：
+            # - 字符串值（从 JSON 反序列化）: 只用键创建 ordering_param
+            # - None 值（从第二次往返序列化）: 同样只用键创建 ordering_param
+            # - 对象值（已经是实际的 Resource 对象）: 直接作为 ordered_items 使用
+            first_val = next(iter(ordering.values()), None) if ordering else None
+            if not ordering or first_val is None or isinstance(first_val, str):
+                # ordering 的值是字符串或 None，只使用键（位置信息）创建新的 OrderedDict
                 # 传递 ordering 参数而不是 ordered_items，让 TubeRack 自己创建 Tube 对象
                 items_to_pass = None
-                # 使用 ordering 参数，只包含位置信息（键）
                 ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
             else:
                 # ordering 的值已经是对象，可以直接使用
@@ -560,14 +650,14 @@ class PRCXI9300Handler(LiquidHandlerAbstract):
         tablets_info = []
         count = 0
         for child in deck.children:
-            if child.children:
-                if "Material" in child.children[0]._unilabos_state:
-                    number = int(child.name.replace("T", ""))
-                    tablets_info.append(
-                        WorkTablets(
-                            Number=number, Code=f"T{number}", Material=child.children[0]._unilabos_state["Material"]
-                        )
+            # 如果放其他类型的物料，是不可以的
+            if hasattr(child, "_unilabos_state") and "Material" in child._unilabos_state:
+                number = int(child.name.replace("T", ""))
+                tablets_info.append(
+                    WorkTablets(
+                        Number=number, Code=f"T{number}", Material=child._unilabos_state["Material"]
                     )
+                )
         if is_9320:
             print("当前设备是9320")
         # 始终初始化 step_mode 属性
@@ -713,7 +803,7 @@ class PRCXI9300Handler(LiquidHandlerAbstract):
         mix_liquid_height: Optional[float] = None,
         delays: Optional[List[int]] = None,
         none_keys: List[str] = [],
-    ):
+    ) -> TransferLiquidReturn:
         return await super().transfer_liquid(
             sources,
             targets,

unilabos/devices/ros_dev/liquid_handler_joint_publisher.py

@@ -19,10 +19,11 @@ from rclpy.node import Node
 import re
 
 class LiquidHandlerJointPublisher(BaseROS2DeviceNode):
-    def __init__(self,resources_config:list, resource_tracker, rate=50, device_id:str = "lh_joint_publisher", **kwargs):
+    def __init__(self,resources_config:list, resource_tracker, rate=50, device_id:str = "lh_joint_publisher", registry_name: str = "lh_joint_publisher", **kwargs):
         super().__init__(
             driver_instance=self,
             device_id=device_id,
+            registry_name=registry_name,
             status_types={},
             action_value_mappings={},
             hardware_interface={},

unilabos/devices/virtual/virtual_transferpump.py

@@ -15,35 +15,35 @@ class VirtualPumpMode(Enum):
 
 class VirtualTransferPump:
     """虚拟转移泵类 - 模拟泵的基本功能，无需实际硬件 🚰"""
-    
+
     _ros_node: BaseROS2DeviceNode
-    
+
     def __init__(self, device_id: str = None, config: dict = None, **kwargs):
         """
         初始化虚拟转移泵
-        
+
         Args:
             device_id: 设备ID
             config: 配置字典，包含max_volume, port等参数
             **kwargs: 其他参数，确保兼容性
         """
         self.device_id = device_id or "virtual_transfer_pump"
-        
+
         # 从config或kwargs中获取参数，确保类型正确
         if config:
-            self.max_volume = float(config.get('max_volume', 25.0))
-            self.port = config.get('port', 'VIRTUAL')
+            self.max_volume = float(config.get("max_volume", 25.0))
+            self.port = config.get("port", "VIRTUAL")
         else:
-            self.max_volume = float(kwargs.get('max_volume', 25.0))
-            self.port = kwargs.get('port', 'VIRTUAL')
-        
-        self._transfer_rate = float(kwargs.get('transfer_rate', 0))
-        self.mode = kwargs.get('mode', VirtualPumpMode.Normal)
-        
+            self.max_volume = float(kwargs.get("max_volume", 25.0))
+            self.port = kwargs.get("port", "VIRTUAL")
+
+        self._transfer_rate = float(kwargs.get("transfer_rate", 0))
+        self.mode = kwargs.get("mode", VirtualPumpMode.Normal)
+
         # 状态变量 - 确保都是正确类型
         self._status = "Idle"
         self._position = 0.0  # float
-        self._max_velocity = 5.0  # float 
+        self._max_velocity = 5.0  # float
         self._current_volume = 0.0  # float
 
         # 🚀 新增：快速模式设置 - 大幅缩短执行时间
@@ -52,14 +52,16 @@ class VirtualTransferPump:
         self._fast_dispense_time = 1.0  # 快速喷射时间（秒）
 
         self.logger = logging.getLogger(f"VirtualTransferPump.{self.device_id}")
-        
+
         print(f"🚰 === 虚拟转移泵 {self.device_id} 已创建 === ✨")
-        print(f"💨 快速模式: {'启用' if self._fast_mode else '禁用'} | 移动时间: {self._fast_move_time}s | 喷射时间: {self._fast_dispense_time}s")
+        print(
+            f"💨 快速模式: {'启用' if self._fast_mode else '禁用'} | 移动时间: {self._fast_move_time}s | 喷射时间: {self._fast_dispense_time}s"
+        )
         print(f"📊 最大容量: {self.max_volume}mL | 端口: {self.port}")
-    
+
     def post_init(self, ros_node: BaseROS2DeviceNode):
         self._ros_node = ros_node
-    
+
     async def initialize(self) -> bool:
         """初始化虚拟泵 🚀"""
         self.logger.info(f"🔧 初始化虚拟转移泵 {self.device_id} ✨")
@@ -68,33 +70,33 @@ class VirtualTransferPump:
         self._current_volume = 0.0
         self.logger.info(f"✅ 转移泵 {self.device_id} 初始化完成 🚰")
         return True
-    
+
     async def cleanup(self) -> bool:
         """清理虚拟泵 🧹"""
         self.logger.info(f"🧹 清理虚拟转移泵 {self.device_id} 🔚")
         self._status = "Idle"
         self.logger.info(f"✅ 转移泵 {self.device_id} 清理完成 💤")
         return True
-    
+
     # 基本属性
     @property
     def status(self) -> str:
         return self._status
-    
+
     @property
     def position(self) -> float:
         """当前柱塞位置 (ml) 📍"""
         return self._position
-    
+
     @property
     def current_volume(self) -> float:
         """当前注射器中的体积 (ml) 💧"""
         return self._current_volume
-    
+
     @property
     def max_velocity(self) -> float:
         return self._max_velocity
-    
+
     @property
     def transfer_rate(self) -> float:
         return self._transfer_rate
@@ -103,17 +105,17 @@ class VirtualTransferPump:
         """设置最大速度 (ml/s) 🌊"""
         self._max_velocity = max(0.1, min(50.0, velocity))  # 限制在合理范围内
         self.logger.info(f"🌊 设置最大速度为 {self._max_velocity} mL/s")
-    
+
     def get_status(self) -> str:
         """获取泵状态 📋"""
         return self._status
-    
+
     async def _simulate_operation(self, duration: float):
         """模拟操作延时 ⏱️"""
         self._status = "Busy"
         await self._ros_node.sleep(duration)
         self._status = "Idle"
-    
+
     def _calculate_duration(self, volume: float, velocity: float = None) -> float:
         """
         计算操作持续时间 ⏰
@@ -121,10 +123,10 @@ class VirtualTransferPump:
         """
         if velocity is None:
             velocity = self._max_velocity
-        
+
         # 📊 计算理论时间（用于日志显示）
         theoretical_duration = abs(volume) / velocity
-        
+
         # 🚀 如果启用快速模式，使用固定的快速时间
         if self._fast_mode:
             # 根据操作类型选择快速时间
@@ -132,13 +134,13 @@ class VirtualTransferPump:
                 actual_duration = self._fast_move_time
             else:  # 很小的操作
                 actual_duration = 0.5
-            
+
             self.logger.debug(f"⚡ 快速模式: 理论时间 {theoretical_duration:.2f}s → 实际时间 {actual_duration:.2f}s")
             return actual_duration
         else:
             # 正常模式使用理论时间
             return theoretical_duration
-    
+
     def _calculate_display_duration(self, volume: float, velocity: float = None) -> float:
         """
         计算显示用的持续时间（用于日志） 📊
@@ -147,16 +149,16 @@ class VirtualTransferPump:
         if velocity is None:
             velocity = self._max_velocity
         return abs(volume) / velocity
-    
+
     # 新的set_position方法 - 专门用于SetPumpPosition动作
     async def set_position(self, position: float, max_velocity: float = None):
         """
         移动到绝对位置 - 专门用于SetPumpPosition动作 🎯
-        
+
         Args:
             position (float): 目标位置 (ml)
             max_velocity (float): 移动速度 (ml/s)
-        
+
         Returns:
             dict: 符合SetPumpPosition.action定义的结果
         """
@@ -164,19 +166,19 @@ class VirtualTransferPump:
             # 验证并转换参数
             target_position = float(position)
             velocity = float(max_velocity) if max_velocity is not None else self._max_velocity
-            
+
             # 限制位置在有效范围内
             target_position = max(0.0, min(float(self.max_volume), target_position))
-            
+
             # 计算移动距离
             volume_to_move = abs(target_position - self._position)
-            
+
             # 📊 计算显示用的时间（用于日志）
             display_duration = self._calculate_display_duration(volume_to_move, velocity)
-            
+
             # ⚡ 计算实际执行时间（快速模式）
             actual_duration = self._calculate_duration(volume_to_move, velocity)
-            
+
             # 🎯 确定操作类型和emoji
             if target_position > self._position:
                 operation_type = "吸液"
@@ -187,28 +189,34 @@ class VirtualTransferPump:
             else:
                 operation_type = "保持"
                 operation_emoji = "📍"
-            
+
             self.logger.info(f"🎯 SET_POSITION: {operation_type} {operation_emoji}")
-            self.logger.info(f"  📍 位置: {self._position:.2f}mL → {target_position:.2f}mL (移动 {volume_to_move:.2f}mL)")
+            self.logger.info(
+                f"  📍 位置: {self._position:.2f}mL → {target_position:.2f}mL (移动 {volume_to_move:.2f}mL)"
+            )
             self.logger.info(f"  🌊 速度: {velocity:.2f} mL/s")
             self.logger.info(f"  ⏰ 预计时间: {display_duration:.2f}s")
-            
+
             if self._fast_mode:
                 self.logger.info(f"  ⚡ 快速模式: 实际用时 {actual_duration:.2f}s")
-            
+
             # 🚀 模拟移动过程
             if volume_to_move > 0.01:  # 只有当移动距离足够大时才显示进度
                 start_position = self._position
                 steps = 5 if actual_duration > 0.5 else 2  # 根据实际时间调整步数
                 step_duration = actual_duration / steps
-                
+
                 self.logger.info(f"🚀 开始{operation_type}... {operation_emoji}")
-                
+
                 for i in range(steps + 1):
                     # 计算当前位置和进度
                     progress = (i / steps) * 100 if steps > 0 else 100
-                    current_pos = start_position + (target_position - start_position) * (i / steps) if steps > 0 else target_position
-                    
+                    current_pos = (
+                        start_position + (target_position - start_position) * (i / steps)
+                        if steps > 0
+                        else target_position
+                    )
+
                     # 更新状态
                     if i < steps:
                         self._status = f"{operation_type}中"
@@ -216,10 +224,10 @@ class VirtualTransferPump:
                     else:
                         self._status = "Idle"
                         status_emoji = "✅"
-                    
+
                     self._position = current_pos
                     self._current_volume = current_pos
-                    
+
                     # 显示进度（每25%或最后一步）
                     if i == 0:
                         self.logger.debug(f"  🔄 {operation_type}开始: {progress:.0f}%")
@@ -227,7 +235,7 @@ class VirtualTransferPump:
                         self.logger.debug(f"  🔄 {operation_type}进度: {progress:.0f}%")
                     elif i == steps:
                         self.logger.info(f"  ✅ {operation_type}完成: {progress:.0f}% | 当前位置: {current_pos:.2f}mL")
-                    
+
                     # 等待一小步时间
                     if i < steps and step_duration > 0:
                         await self._ros_node.sleep(step_duration)
@@ -236,25 +244,27 @@ class VirtualTransferPump:
                 self._position = target_position
                 self._current_volume = target_position
                 self.logger.info(f"  📍 微调完成: {target_position:.2f}mL")
-        
+
             # 确保最终位置准确
             self._position = target_position
             self._current_volume = target_position
             self._status = "Idle"
-            
+
             # 📊 最终状态日志
             if volume_to_move > 0.01:
-                self.logger.info(f"🎉 SET_POSITION 完成! 📍 最终位置: {self._position:.2f}mL | 💧 当前体积: {self._current_volume:.2f}mL")
-            
+                self.logger.info(
+                    f"🎉 SET_POSITION 完成! 📍 最终位置: {self._position:.2f}mL | 💧 当前体积: {self._current_volume:.2f}mL"
+                )
+
             # 返回符合action定义的结果
             return {
                 "success": True,
                 "message": f"✅ 成功移动到位置 {self._position:.2f}mL ({operation_type})",
                 "final_position": self._position,
                 "final_volume": self._current_volume,
-                "operation_type": operation_type
+                "operation_type": operation_type,
             }
-            
+
         except Exception as e:
             error_msg = f"❌ 设置位置失败: {str(e)}"
             self.logger.error(error_msg)
@@ -262,134 +272,136 @@ class VirtualTransferPump:
                 "success": False,
                 "message": error_msg,
                 "final_position": self._position,
-                "final_volume": self._current_volume
+                "final_volume": self._current_volume,
             }
-    
+
     # 其他泵操作方法
     async def pull_plunger(self, volume: float, velocity: float = None):
         """
         拉取柱塞（吸液） 📥
-        
+
         Args:
             volume (float): 要拉取的体积 (ml)
             velocity (float): 拉取速度 (ml/s)
         """
         new_position = min(self.max_volume, self._position + volume)
         actual_volume = new_position - self._position
-        
+
         if actual_volume <= 0:
             self.logger.warning("⚠️ 无法吸液 - 已达到最大容量")
             return
-        
+
         display_duration = self._calculate_display_duration(actual_volume, velocity)
         actual_duration = self._calculate_duration(actual_volume, velocity)
-        
+
         self.logger.info(f"📥 开始吸液: {actual_volume:.2f}mL")
         self.logger.info(f"  📍 位置: {self._position:.2f}mL → {new_position:.2f}mL")
         self.logger.info(f"  ⏰ 预计时间: {display_duration:.2f}s")
-        
+
         if self._fast_mode:
             self.logger.info(f"  ⚡ 快速模式: 实际用时 {actual_duration:.2f}s")
-        
+
         await self._simulate_operation(actual_duration)
-        
+
         self._position = new_position
         self._current_volume = new_position
-        
+
         self.logger.info(f"✅ 吸液完成: {actual_volume:.2f}mL | 💧 当前体积: {self._current_volume:.2f}mL")
 
     async def push_plunger(self, volume: float, velocity: float = None):
         """
         推出柱塞（排液） 📤
-        
+
         Args:
             volume (float): 要推出的体积 (ml)
             velocity (float): 推出速度 (ml/s)
         """
         new_position = max(0, self._position - volume)
         actual_volume = self._position - new_position
-        
+
         if actual_volume <= 0:
             self.logger.warning("⚠️ 无法排液 - 已达到最小容量")
             return
-        
+
         display_duration = self._calculate_display_duration(actual_volume, velocity)
         actual_duration = self._calculate_duration(actual_volume, velocity)
-        
+
         self.logger.info(f"📤 开始排液: {actual_volume:.2f}mL")
         self.logger.info(f"  📍 位置: {self._position:.2f}mL → {new_position:.2f}mL")
         self.logger.info(f"  ⏰ 预计时间: {display_duration:.2f}s")
-        
+
         if self._fast_mode:
             self.logger.info(f"  ⚡ 快速模式: 实际用时 {actual_duration:.2f}s")
-        
+
         await self._simulate_operation(actual_duration)
-        
+
         self._position = new_position
         self._current_volume = new_position
-        
+
         self.logger.info(f"✅ 排液完成: {actual_volume:.2f}mL | 💧 当前体积: {self._current_volume:.2f}mL")
 
     # 便捷操作方法
     async def aspirate(self, volume: float, velocity: float = None):
         """吸液操作 📥"""
         await self.pull_plunger(volume, velocity)
-    
+
     async def dispense(self, volume: float, velocity: float = None):
         """排液操作 📤"""
         await self.push_plunger(volume, velocity)
-    
+
     async def transfer(self, volume: float, aspirate_velocity: float = None, dispense_velocity: float = None):
         """转移操作（先吸后排） 🔄"""
         self.logger.info(f"🔄 开始转移操作: {volume:.2f}mL")
-        
+
         # 吸液
         await self.aspirate(volume, aspirate_velocity)
-        
+
         # 短暂停顿
         self.logger.debug("⏸️ 短暂停顿...")
         await self._ros_node.sleep(0.1)
-        
+
         # 排液
         await self.dispense(volume, dispense_velocity)
-    
+
     async def empty_syringe(self, velocity: float = None):
         """清空注射器"""
         await self.set_position(0, velocity)
-    
+
     async def fill_syringe(self, velocity: float = None):
         """充满注射器"""
         await self.set_position(self.max_volume, velocity)
-    
+
     async def stop_operation(self):
         """停止当前操作"""
         self._status = "Idle"
         self.logger.info("Operation stopped")
-    
+
     # 状态查询方法
     def get_position(self) -> float:
         """获取当前位置"""
         return self._position
-    
+
     def get_current_volume(self) -> float:
         """获取当前体积"""
         return self._current_volume
-    
+
     def get_remaining_capacity(self) -> float:
         """获取剩余容量"""
         return self.max_volume - self._current_volume
-    
+
     def is_empty(self) -> bool:
         """检查是否为空"""
         return self._current_volume <= 0.01  # 允许小量误差
-    
+
     def is_full(self) -> bool:
         """检查是否已满"""
         return self._current_volume >= (self.max_volume - 0.01)  # 允许小量误差
-    
+
     def __str__(self):
-        return f"VirtualTransferPump({self.device_id}: {self._current_volume:.2f}/{self.max_volume} ml, {self._status})"
-    
+        return (
+            f"VirtualTransferPump({self.device_id}: {self._current_volume:.2f}/{self.max_volume} ml, {self._status})"
+        )
+
     def __repr__(self):
         return self.__str__()
 
@@ -398,20 +410,20 @@ class VirtualTransferPump:
 async def demo():
     """虚拟泵使用示例"""
     pump = VirtualTransferPump("demo_pump", {"max_volume": 50.0})
-    
+
     await pump.initialize()
-    
+
     print(f"Initial state: {pump}")
-    
+
     # 测试set_position方法
     result = await pump.set_position(10.0, max_velocity=2.0)
     print(f"Set position result: {result}")
     print(f"After setting position to 10ml: {pump}")
-    
+
     # 吸液测试
     await pump.aspirate(5.0, velocity=2.0)
     print(f"After aspirating 5ml: {pump}")
-    
+
     # 清空测试
     result = await pump.set_position(0.0)
     print(f"Empty result: {result}")

unilabos/devices/virtual/workbench.py

@@ -11,9 +11,10 @@ Virtual Workbench Device - 模拟工作台设备
 
 注意：调用来自线程池，使用 threading.Lock 进行同步
 """
+
 import logging
 import time
-from typing import Dict, Any, Optional
+from typing import Dict, Any, Optional, List
 from dataclasses import dataclass
 from enum import Enum
 from threading import Lock, RLock
@@ -21,38 +22,47 @@ from threading import Lock, RLock
 from typing_extensions import TypedDict
 
 from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
-from unilabos.utils.decorator import not_action
+from unilabos.utils.decorator import not_action, always_free
+from unilabos.resources.resource_tracker import SampleUUIDsType, LabSample, RETURN_UNILABOS_SAMPLES
 
 
 # ============ TypedDict 返回类型定义 ============
 
+
 class MoveToHeatingStationResult(TypedDict):
     """move_to_heating_station 返回类型"""
+
     success: bool
     station_id: int
     material_id: str
     material_number: int
     message: str
+    unilabos_samples: List[LabSample]
 
 
 class StartHeatingResult(TypedDict):
     """start_heating 返回类型"""
+
     success: bool
     station_id: int
     material_id: str
     material_number: int
     message: str
+    unilabos_samples: List[LabSample]
 
 
 class MoveToOutputResult(TypedDict):
     """move_to_output 返回类型"""
+
     success: bool
     station_id: int
     material_id: str
+    unilabos_samples: List[LabSample]
 
 
 class PrepareMaterialsResult(TypedDict):
     """prepare_materials 返回类型 - 批量准备物料"""
+
     success: bool
     count: int
     material_1: int  # 物料编号1
@@ -61,12 +71,15 @@ class PrepareMaterialsResult(TypedDict):
     material_4: int  # 物料编号4
     material_5: int  # 物料编号5
     message: str
+    unilabos_samples: List[LabSample]
 
 
 # ============ 状态枚举 ============
 
+
 class HeatingStationState(Enum):
     """加热台状态枚举"""
+
     IDLE = "idle"  # 空闲
     OCCUPIED = "occupied"  # 已放置物料，等待加热
     HEATING = "heating"  # 加热中
@@ -75,6 +88,7 @@ class HeatingStationState(Enum):
 
 class ArmState(Enum):
     """机械臂状态枚举"""
+
     IDLE = "idle"  # 空闲
     BUSY = "busy"  # 工作中
 
@@ -82,6 +96,7 @@ class ArmState(Enum):
 @dataclass
 class HeatingStation:
     """加热台数据结构"""
+
     station_id: int
     state: HeatingStationState = HeatingStationState.IDLE
     current_material: Optional[str] = None  # 当前物料 (如 "A1", "A2")
@@ -108,8 +123,8 @@ class VirtualWorkbench:
     _ros_node: BaseROS2DeviceNode
 
     # 配置常量
-    ARM_OPERATION_TIME: float = 3.0  # 机械臂操作时间(秒)
-    HEATING_TIME: float = 10.0  # 加热时间(秒)
+    ARM_OPERATION_TIME: float = 2  # 机械臂操作时间(秒)
+    HEATING_TIME: float = 60.0  # 加热时间(秒)
     NUM_HEATING_STATIONS: int = 3  # 加热台数量
 
     def __init__(self, device_id: Optional[str] = None, config: Optional[Dict[str, Any]] = None, **kwargs):
@@ -126,9 +141,9 @@ class VirtualWorkbench:
         self.data: Dict[str, Any] = {}
 
         # 从config中获取可配置参数
-        self.ARM_OPERATION_TIME = float(self.config.get("arm_operation_time", 3.0))
-        self.HEATING_TIME = float(self.config.get("heating_time", 10.0))
-        self.NUM_HEATING_STATIONS = int(self.config.get("num_heating_stations", 3))
+        self.ARM_OPERATION_TIME = float(self.config.get("arm_operation_time", self.ARM_OPERATION_TIME))
+        self.HEATING_TIME = float(self.config.get("heating_time", self.HEATING_TIME))
+        self.NUM_HEATING_STATIONS = int(self.config.get("num_heating_stations", self.NUM_HEATING_STATIONS))
 
         # 机械臂状态和锁 (使用threading.Lock)
         self._arm_lock = Lock()
@@ -137,8 +152,7 @@ class VirtualWorkbench:
 
         # 加热台状态 (station_id -> HeatingStation) - 立即初始化，不依赖initialize()
         self._heating_stations: Dict[int, HeatingStation] = {
-            i: HeatingStation(station_id=i)
-            for i in range(1, self.NUM_HEATING_STATIONS + 1)
+            i: HeatingStation(station_id=i) for i in range(1, self.NUM_HEATING_STATIONS + 1)
         }
         self._stations_lock = RLock()  # 可重入锁，保护加热台状态
 
@@ -178,14 +192,16 @@ class VirtualWorkbench:
                 station.heating_progress = 0.0
 
         # 初始化状态
-        self.data.update({
-            "status": "Ready",
-            "arm_state": ArmState.IDLE.value,
-            "arm_current_task": None,
-            "heating_stations": self._get_stations_status(),
-            "active_tasks_count": 0,
-            "message": "工作台就绪",
-        })
+        self.data.update(
+            {
+                "status": "Ready",
+                "arm_state": ArmState.IDLE.value,
+                "arm_current_task": None,
+                "heating_stations": self._get_stations_status(),
+                "active_tasks_count": 0,
+                "message": "工作台就绪",
+            }
+        )
 
         self.logger.info(f"工作台初始化完成: {self.NUM_HEATING_STATIONS}个加热台就绪")
         return True
@@ -204,12 +220,14 @@ class VirtualWorkbench:
         with self._tasks_lock:
             self._active_tasks.clear()
 
-        self.data.update({
-            "status": "Offline",
-            "arm_state": ArmState.IDLE.value,
-            "heating_stations": {},
-            "message": "工作台已关闭",
-        })
+        self.data.update(
+            {
+                "status": "Offline",
+                "arm_state": ArmState.IDLE.value,
+                "heating_stations": {},
+                "message": "工作台已关闭",
+            }
+        )
         return True
 
     def _get_stations_status(self) -> Dict[int, Dict[str, Any]]:
@@ -227,12 +245,14 @@ class VirtualWorkbench:
 
     def _update_data_status(self, message: Optional[str] = None):
         """更新状态数据"""
-        self.data.update({
-            "arm_state": self._arm_state.value,
-            "arm_current_task": self._arm_current_task,
-            "heating_stations": self._get_stations_status(),
-            "active_tasks_count": len(self._active_tasks),
-        })
+        self.data.update(
+            {
+                "arm_state": self._arm_state.value,
+                "arm_current_task": self._arm_current_task,
+                "heating_stations": self._get_stations_status(),
+                "active_tasks_count": len(self._active_tasks),
+            }
+        )
         if message:
             self.data["message"] = message
 
@@ -280,6 +300,7 @@ class VirtualWorkbench:
 
     def prepare_materials(
         self,
+        sample_uuids: SampleUUIDsType,
         count: int = 5,
     ) -> PrepareMaterialsResult:
         """
@@ -297,10 +318,7 @@ class VirtualWorkbench:
         # 生成物料列表 A1 - A{count}
         materials = [i for i in range(1, count + 1)]
 
-        self.logger.info(
-            f"[准备物料] 生成 {count} 个物料: "
-            f"A1-A{count} -> material_1~material_{count}"
-        )
+        self.logger.info(f"[准备物料] 生成 {count} 个物料: " f"A1-A{count} -> material_1~material_{count}")
 
         return {
             "success": True,
@@ -311,10 +329,12 @@ class VirtualWorkbench:
             "material_4": materials[3] if len(materials) > 3 else 0,
             "material_5": materials[4] if len(materials) > 4 else 0,
             "message": f"已准备 {count} 个物料: A1-A{count}",
+            "unilabos_samples": [LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for sample_uuid, content in sample_uuids.items()]
         }
 
     def move_to_heating_station(
         self,
+        sample_uuids: SampleUUIDsType,
         material_number: int,
     ) -> MoveToHeatingStationResult:
         """
@@ -391,6 +411,9 @@ class VirtualWorkbench:
                 "material_id": material_id,
                 "material_number": material_number,
                 "message": f"{material_id}已成功移动到加热台{station_id}",
+                "unilabos_samples": [
+                    LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                    sample_uuid, content in sample_uuids.items()]
             }
 
         except Exception as e:
@@ -403,10 +426,15 @@ class VirtualWorkbench:
                 "material_id": material_id,
                 "material_number": material_number,
                 "message": f"移动失败: {str(e)}",
+                "unilabos_samples": [
+                    LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                    sample_uuid, content in sample_uuids.items()]
             }
 
+    @always_free
     def start_heating(
         self,
+        sample_uuids: SampleUUIDsType,
         station_id: int,
         material_number: int,
     ) -> StartHeatingResult:
@@ -429,6 +457,9 @@ class VirtualWorkbench:
                 "material_id": "",
                 "material_number": material_number,
                 "message": f"无效的加热台ID: {station_id}",
+                "unilabos_samples": [
+                    LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                    sample_uuid, content in sample_uuids.items()]
             }
 
         with self._stations_lock:
@@ -441,6 +472,9 @@ class VirtualWorkbench:
                     "material_id": "",
                     "material_number": material_number,
                     "message": f"加热台{station_id}上没有物料",
+                    "unilabos_samples": [
+                        LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                        sample_uuid, content in sample_uuids.items()]
                 }
 
             if station.state == HeatingStationState.HEATING:
@@ -450,6 +484,9 @@ class VirtualWorkbench:
                     "material_id": station.current_material,
                     "material_number": material_number,
                     "message": f"加热台{station_id}已经在加热中",
+                    "unilabos_samples": [
+                        LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                        sample_uuid, content in sample_uuids.items()]
                 }
 
             material_id = station.current_material
@@ -465,10 +502,21 @@ class VirtualWorkbench:
 
         self._update_data_status(f"加热台{station_id}开始加热{material_id}")
 
-        # 模拟加热过程 (10秒)
+        # 打印当前所有正在加热的台位
+        with self._stations_lock:
+            heating_list = [
+                f"加热台{sid}:{s.current_material}"
+                for sid, s in self._heating_stations.items()
+                if s.state == HeatingStationState.HEATING and s.current_material
+            ]
+        self.logger.info(f"[并行加热] 当前同时加热中: {', '.join(heating_list)}")
+
+        # 模拟加热过程
         start_time = time.time()
+        last_countdown_log = start_time
         while True:
             elapsed = time.time() - start_time
+            remaining = max(0.0, self.HEATING_TIME - elapsed)
             progress = min(100.0, (elapsed / self.HEATING_TIME) * 100)
 
             with self._stations_lock:
@@ -476,6 +524,11 @@ class VirtualWorkbench:
 
             self._update_data_status(f"加热台{station_id}加热中: {progress:.1f}%")
 
+            # 每5秒打印一次倒计时
+            if time.time() - last_countdown_log >= 5.0:
+                self.logger.info(f"[加热台{station_id}] {material_id} 剩余 {remaining:.1f}s")
+                last_countdown_log = time.time()
+
             if elapsed >= self.HEATING_TIME:
                 break
 
@@ -499,10 +552,14 @@ class VirtualWorkbench:
             "material_id": material_id,
             "material_number": material_number,
             "message": f"加热台{station_id}加热完成",
+            "unilabos_samples": [
+                LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                sample_uuid, content in sample_uuids.items()]
         }
 
     def move_to_output(
         self,
+        sample_uuids: SampleUUIDsType,
         station_id: int,
         material_number: int,
     ) -> MoveToOutputResult:
@@ -525,6 +582,9 @@ class VirtualWorkbench:
                 "material_id": "",
                 "output_position": f"C{output_number}",
                 "message": f"无效的加热台ID: {station_id}",
+                "unilabos_samples": [
+                    LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                    sample_uuid, content in sample_uuids.items()]
             }
 
         with self._stations_lock:
@@ -538,6 +598,9 @@ class VirtualWorkbench:
                     "material_id": "",
                     "output_position": f"C{output_number}",
                     "message": f"加热台{station_id}上没有物料",
+                    "unilabos_samples": [
+                        LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                        sample_uuid, content in sample_uuids.items()]
                 }
 
             if station.state != HeatingStationState.COMPLETED:
@@ -547,6 +610,9 @@ class VirtualWorkbench:
                     "material_id": material_id,
                     "output_position": f"C{output_number}",
                     "message": f"加热台{station_id}尚未完成加热 (当前状态: {station.state.value})",
+                    "unilabos_samples": [
+                        LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                        sample_uuid, content in sample_uuids.items()]
                 }
 
         output_position = f"C{output_number}"
@@ -595,6 +661,9 @@ class VirtualWorkbench:
                 "material_id": material_id,
                 "output_position": output_position,
                 "message": f"{material_id}已成功移动到{output_position}",
+                "unilabos_samples": [
+                    LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                    sample_uuid, content in sample_uuids.items()]
             }
 
         except Exception as e:
@@ -607,6 +676,9 @@ class VirtualWorkbench:
                 "material_id": "",
                 "output_position": output_position,
                 "message": f"移动失败: {str(e)}",
+                "unilabos_samples": [
+                    LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for
+                    sample_uuid, content in sample_uuids.items()]
             }
 
     # ============ 状态属性 ============

unilabos/devices/workstation/bioyond_studio/station.py

@@ -258,7 +258,7 @@ class BioyondResourceSynchronizer(ResourceSynchronizer):
                 logger.info(f"[同步→Bioyond] ➕ 物料不存在于 Bioyond，将创建新物料并入库")
 
             # 第1步：从配置中获取仓库配置
-            warehouse_mapping = self.bioyond_config.get("warehouse_mapping", {})
+            warehouse_mapping = self.workstation.bioyond_config.get("warehouse_mapping", {})
 
             # 确定目标仓库名称
             parent_name = None

unilabos/registry/device_comms/communication_devices.yaml

@@ -96,10 +96,13 @@ serial:
           type: string
         port:
           type: string
+        registry_name:
+          type: string
         resource_tracker:
           type: object
       required:
       - device_id
+      - registry_name
       - port
       type: object
     data:

unilabos/registry/devices/camera.yaml

@@ -67,6 +67,9 @@ camera:
         period:
           default: 0.1
           type: number
+        registry_name:
+          default: ''
+          type: string
         resource_tracker:
           type: object
       required: []

unilabos/registry/devices/liquid_handler.yaml

@@ -638,7 +638,7 @@ liquid_handler:
         placeholder_keys: {}
         result: {}
         schema:
-          description: 吸头迭代函数。用于自动管理和切换吸头架中的吸头，实现批量实验中的吸头自动分配和追踪。该函数监控吸头使用状态，自动切换到下一个可用吸头位置，确保实验流程的连续性。适用于高通量实验、批量处理、自动化流水线等需要大量吸头管理的应用场景。
+          description: 吸头迭代函数。用于自动管理和切换枪头盒中的吸头，实现批量实验中的吸头自动分配和追踪。该函数监控吸头使用状态，自动切换到下一个可用吸头位置，确保实验流程的连续性。适用于高通量实验、批量处理、自动化流水线等需要大量吸头管理的应用场景。
           properties:
             feedback: {}
             goal:
@@ -712,6 +712,43 @@ liquid_handler:
           title: set_group参数
           type: object
         type: UniLabJsonCommand
+      auto-set_liquid_from_plate:
+        feedback: {}
+        goal: {}
+        goal_default:
+          liquid_names: null
+          plate: null
+          volumes: null
+          well_names: null
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: ''
+          properties:
+            feedback: {}
+            goal:
+              properties:
+                liquid_names:
+                  type: string
+                plate:
+                  type: string
+                volumes:
+                  type: string
+                well_names:
+                  type: string
+              required:
+              - plate
+              - well_names
+              - liquid_names
+              - volumes
+              type: object
+            result: {}
+          required:
+          - goal
+          title: set_liquid_from_plate参数
+          type: object
+        type: UniLabJsonCommand
       auto-set_tiprack:
         feedback: {}
         goal: {}
@@ -721,7 +758,7 @@ liquid_handler:
         placeholder_keys: {}
         result: {}
         schema:
-          description: 吸头架设置函数。用于配置和初始化液体处理系统的吸头架信息，包括吸头架位置、类型、容量等参数。该函数建立吸头资源管理系统，为后续的吸头选择和使用提供基础配置。适用于系统初始化、吸头架更换、实验配置等需要吸头资源管理的操作场景。
+          description: 枪头盒设置函数。用于配置和初始化液体处理系统的枪头盒信息，包括枪头盒位置、类型、容量等参数。该函数建立吸头资源管理系统，为后续的吸头选择和使用提供基础配置。适用于系统初始化、枪头盒更换、实验配置等需要吸头资源管理的操作场景。
           properties:
             feedback: {}
             goal:
@@ -4093,32 +4130,32 @@ liquid_handler:
           - 0
         handles:
           input:
-          - data_key: liquid
+          - data_key: sources
             data_source: handle
             data_type: resource
             handler_key: sources
-            label: sources
-          - data_key: liquid
-            data_source: executor
-            data_type: resource
-            handler_key: targets
-            label: targets
-          - data_key: liquid
-            data_source: executor
-            data_type: resource
-            handler_key: tip_rack
-            label: tip_rack
-          output:
-          - data_key: liquid
+            label: 待移动液体
+          - data_key: targets
             data_source: handle
             data_type: resource
+            handler_key: targets
+            label: 转移目标
+          - data_key: tip_racks
+            data_source: handle
+            data_type: resource
+            handler_key: tip_rack
+            label: 枪头盒
+          output:
+          - data_key: sources.@flatten
+            data_source: executor
+            data_type: resource
             handler_key: sources_out
-            label: sources
-          - data_key: liquid
+            label: 移液后源孔
+          - data_key: targets.@flatten
             data_source: executor
             data_type: resource
             handler_key: targets_out
-            label: targets
+            label: 移液后目标孔
         placeholder_keys:
           sources: unilabos_resources
           targets: unilabos_resources
@@ -5114,19 +5151,34 @@ liquid_handler.biomek:
           - 0
         handles:
           input:
-          - data_key: liquid
+          - data_key: sources
             data_source: handle
             data_type: resource
-            handler_key: liquid-input
+            handler_key: sources
             io_type: target
-            label: Liquid Input
+            label: 待移动液体
+          - data_key: targets
+            data_source: handle
+            data_type: resource
+            handler_key: targets
+            label: 转移目标
+          - data_key: tip_racks
+            data_source: handle
+            data_type: resource
+            handler_key: tip_rack
+            label: 枪头盒
           output:
-          - data_key: liquid
+          - data_key: sources.@flatten
             data_source: executor
             data_type: resource
-            handler_key: liquid-output
+            handler_key: sources_out
             io_type: source
-            label: Liquid Output
+            label: 移液后源孔
+          - data_key: targets.@flatten
+            data_source: executor
+            data_type: resource
+            handler_key: targets_out
+            label: 移液后目标孔
         placeholder_keys:
           sources: unilabos_resources
           targets: unilabos_resources
@@ -9416,7 +9468,7 @@ liquid_handler.prcxi:
           well_names: null
         handles:
           input:
-          - data_key: plate
+          - data_key: '@this.0@@@plate'
             data_source: handle
             data_type: resource
             handler_key: input_plate
@@ -9538,9 +9590,195 @@ liquid_handler.prcxi:
               - volumes
               type: object
             result:
+              $defs:
+                ResourceDict:
+                  properties:
+                    class:
+                      description: Resource class name
+                      title: Class
+                      type: string
+                    config:
+                      additionalProperties: true
+                      description: Resource configuration
+                      title: Config
+                      type: object
+                    data:
+                      additionalProperties: true
+                      description: 'Resource data, eg: container liquid data'
+                      title: Data
+                      type: object
+                    description:
+                      default: ''
+                      description: Resource description
+                      title: Description
+                      type: string
+                    extra:
+                      additionalProperties: true
+                      description: 'Extra data, eg: slot index'
+                      title: Extra
+                      type: object
+                    icon:
+                      default: ''
+                      description: Resource icon
+                      title: Icon
+                      type: string
+                    id:
+                      description: Resource ID
+                      title: Id
+                      type: string
+                    model:
+                      additionalProperties: true
+                      description: Resource model
+                      title: Model
+                      type: object
+                    name:
+                      description: Resource name
+                      title: Name
+                      type: string
+                    parent:
+                      anyOf:
+                      - $ref: '#/$defs/ResourceDict'
+                      - type: 'null'
+                      default: null
+                      description: Parent resource object
+                    parent_uuid:
+                      anyOf:
+                      - type: string
+                      - type: 'null'
+                      default: null
+                      description: Parent resource uuid
+                      title: Parent Uuid
+                    pose:
+                      $ref: '#/$defs/ResourceDictPosition'
+                      description: Resource position
+                    schema:
+                      additionalProperties: true
+                      description: Resource schema
+                      title: Schema
+                      type: object
+                    type:
+                      anyOf:
+                      - const: device
+                        type: string
+                      - type: string
+                      description: Resource type
+                      title: Type
+                    uuid:
+                      description: Resource UUID
+                      title: Uuid
+                      type: string
+                  required:
+                  - id
+                  - uuid
+                  - name
+                  - type
+                  - class
+                  - config
+                  - data
+                  - extra
+                  title: ResourceDict
+                  type: object
+                ResourceDictPosition:
+                  properties:
+                    cross_section_type:
+                      default: rectangle
+                      description: Cross section type
+                      enum:
+                      - rectangle
+                      - circle
+                      - rounded_rectangle
+                      title: Cross Section Type
+                      type: string
+                    layout:
+                      default: x-y
+                      description: Resource layout
+                      enum:
+                      - 2d
+                      - x-y
+                      - z-y
+                      - x-z
+                      title: Layout
+                      type: string
+                    position:
+                      $ref: '#/$defs/ResourceDictPositionObject'
+                      description: Resource position
+                    position3d:
+                      $ref: '#/$defs/ResourceDictPositionObject'
+                      description: Resource position in 3D space
+                    rotation:
+                      $ref: '#/$defs/ResourceDictPositionObject'
+                      description: Resource rotation
+                    scale:
+                      $ref: '#/$defs/ResourceDictPositionScale'
+                      description: Resource scale
+                    size:
+                      $ref: '#/$defs/ResourceDictPositionSize'
+                      description: Resource size
+                  title: ResourceDictPosition
+                  type: object
+                ResourceDictPositionObject:
+                  properties:
+                    x:
+                      default: 0.0
+                      description: X coordinate
+                      title: X
+                      type: number
+                    y:
+                      default: 0.0
+                      description: Y coordinate
+                      title: Y
+                      type: number
+                    z:
+                      default: 0.0
+                      description: Z coordinate
+                      title: Z
+                      type: number
+                  title: ResourceDictPositionObject
+                  type: object
+                ResourceDictPositionScale:
+                  properties:
+                    x:
+                      default: 0.0
+                      description: x scale
+                      title: X
+                      type: number
+                    y:
+                      default: 0.0
+                      description: y scale
+                      title: Y
+                      type: number
+                    z:
+                      default: 0.0
+                      description: z scale
+                      title: Z
+                      type: number
+                  title: ResourceDictPositionScale
+                  type: object
+                ResourceDictPositionSize:
+                  properties:
+                    depth:
+                      default: 0.0
+                      description: Depth
+                      title: Depth
+                      type: number
+                    height:
+                      default: 0.0
+                      description: Height
+                      title: Height
+                      type: number
+                    width:
+                      default: 0.0
+                      description: Width
+                      title: Width
+                      type: number
+                  title: ResourceDictPositionSize
+                  type: object
               properties:
                 plate:
-                  items: {}
+                  items:
+                    items:
+                      $ref: '#/$defs/ResourceDict'
+                    type: array
                   title: Plate
                   type: array
                 volumes:
@@ -9549,7 +9787,10 @@ liquid_handler.prcxi:
                   title: Volumes
                   type: array
                 wells:
-                  items: {}
+                  items:
+                    items:
+                      $ref: '#/$defs/ResourceDict'
+                    type: array
                   title: Wells
                   type: array
               required:
@@ -9922,18 +10163,18 @@ liquid_handler.prcxi:
             data_source: handle
             data_type: resource
             handler_key: tip_rack_identifier
-            label: 墙头盒
+            label: 枪头盒
           output:
-          - data_key: liquid
-            data_source: handle
+          - data_key: sources.@flatten
+            data_source: executor
             data_type: resource
             handler_key: sources_out
-            label: sources
-          - data_key: liquid
+            label: 移液后源孔
+          - data_key: targets.@flatten
             data_source: executor
             data_type: resource
             handler_key: targets_out
-            label: targets
+            label: 移液后目标孔
         placeholder_keys:
           sources: unilabos_resources
           targets: unilabos_resources

unilabos/registry/devices/virtual_device.yaml

@@ -5835,6 +5835,25 @@ virtual_workbench:
               - material_number
               type: object
             result:
+              $defs:
+                LabSample:
+                  properties:
+                    extra:
+                      additionalProperties: true
+                      title: Extra
+                      type: object
+                    oss_path:
+                      title: Oss Path
+                      type: string
+                    sample_uuid:
+                      title: Sample Uuid
+                      type: string
+                  required:
+                  - sample_uuid
+                  - oss_path
+                  - extra
+                  title: LabSample
+                  type: object
               description: move_to_heating_station 返回类型
               properties:
                 material_id:
@@ -5853,12 +5872,18 @@ virtual_workbench:
                 success:
                   title: Success
                   type: boolean
+                unilabos_samples:
+                  items:
+                    $ref: '#/$defs/LabSample'
+                  title: Unilabos Samples
+                  type: array
               required:
               - success
               - station_id
               - material_id
               - material_number
               - message
+              - unilabos_samples
               title: MoveToHeatingStationResult
               type: object
           required:
@@ -5903,6 +5928,25 @@ virtual_workbench:
               - material_number
               type: object
             result:
+              $defs:
+                LabSample:
+                  properties:
+                    extra:
+                      additionalProperties: true
+                      title: Extra
+                      type: object
+                    oss_path:
+                      title: Oss Path
+                      type: string
+                    sample_uuid:
+                      title: Sample Uuid
+                      type: string
+                  required:
+                  - sample_uuid
+                  - oss_path
+                  - extra
+                  title: LabSample
+                  type: object
               description: move_to_output 返回类型
               properties:
                 material_id:
@@ -5914,10 +5958,16 @@ virtual_workbench:
                 success:
                   title: Success
                   type: boolean
+                unilabos_samples:
+                  items:
+                    $ref: '#/$defs/LabSample'
+                  title: Unilabos Samples
+                  type: array
               required:
               - success
               - station_id
               - material_id
+              - unilabos_samples
               title: MoveToOutputResult
               type: object
           required:
@@ -5972,6 +6022,25 @@ virtual_workbench:
               required: []
               type: object
             result:
+              $defs:
+                LabSample:
+                  properties:
+                    extra:
+                      additionalProperties: true
+                      title: Extra
+                      type: object
+                    oss_path:
+                      title: Oss Path
+                      type: string
+                    sample_uuid:
+                      title: Sample Uuid
+                      type: string
+                  required:
+                  - sample_uuid
+                  - oss_path
+                  - extra
+                  title: LabSample
+                  type: object
               description: prepare_materials 返回类型 - 批量准备物料
               properties:
                 count:
@@ -5998,6 +6067,11 @@ virtual_workbench:
                 success:
                   title: Success
                   type: boolean
+                unilabos_samples:
+                  items:
+                    $ref: '#/$defs/LabSample'
+                  title: Unilabos Samples
+                  type: array
               required:
               - success
               - count
@@ -6007,6 +6081,7 @@ virtual_workbench:
               - material_4
               - material_5
               - message
+              - unilabos_samples
               title: PrepareMaterialsResult
               type: object
           required:
@@ -6015,6 +6090,7 @@ virtual_workbench:
           type: object
         type: UniLabJsonCommand
       auto-start_heating:
+        always_free: true
         feedback: {}
         goal: {}
         goal_default:
@@ -6062,6 +6138,25 @@ virtual_workbench:
               - material_number
               type: object
             result:
+              $defs:
+                LabSample:
+                  properties:
+                    extra:
+                      additionalProperties: true
+                      title: Extra
+                      type: object
+                    oss_path:
+                      title: Oss Path
+                      type: string
+                    sample_uuid:
+                      title: Sample Uuid
+                      type: string
+                  required:
+                  - sample_uuid
+                  - oss_path
+                  - extra
+                  title: LabSample
+                  type: object
               description: start_heating 返回类型
               properties:
                 material_id:
@@ -6079,12 +6174,18 @@ virtual_workbench:
                 success:
                   title: Success
                   type: boolean
+                unilabos_samples:
+                  items:
+                    $ref: '#/$defs/LabSample'
+                  title: Unilabos Samples
+                  type: array
               required:
               - success
               - station_id
               - material_id
               - material_number
               - message
+              - unilabos_samples
               title: StartHeatingResult
               type: object
           required:

unilabos/registry/registry.py

@@ -5,6 +5,7 @@ import sys
 import inspect
 import importlib
 import threading
+import traceback
 from concurrent.futures import ThreadPoolExecutor, as_completed
 from pathlib import Path
 from typing import Any, Dict, List, Union, Tuple
@@ -88,6 +89,14 @@ class Registry:
         )
         test_latency_schema["description"] = "用于测试延迟的动作，返回延迟时间和时间差。"
 
+        test_resource_method_info = host_node_enhanced_info.get("action_methods", {}).get("test_resource", {})
+        test_resource_schema = self._generate_unilab_json_command_schema(
+            test_resource_method_info.get("args", []),
+            "test_resource",
+            test_resource_method_info.get("return_annotation"),
+        )
+        test_resource_schema["description"] = "用于测试物料、设备和样本。"
+
         self.device_type_registry.update(
             {
                 "host_node": {
@@ -166,7 +175,8 @@ class Registry:
                                     "res_id": "unilabos_resources",  # 将当前实验室的全部物料id作为下拉框可选择
                                     "device_id": "unilabos_devices",  # 将当前实验室的全部设备id作为下拉框可选择
                                     "parent": "unilabos_nodes",  # 将当前实验室的设备/物料作为下拉框可选择
-                                    "class_name": "unilabos_class",
+                                    "class_name": "unilabos_class",  # 当前实验室物料的class name
+                                    "slot_on_deck": "unilabos_resource_slot:parent",  # 勾选的parent的config中的sites的name，展示name，参数对应slot（index）
                                 },
                             },
                             "test_latency": {
@@ -189,32 +199,7 @@ class Registry:
                                 "goal": {},
                                 "feedback": {},
                                 "result": {},
-                                "schema": {
-                                    "description": "",
-                                    "properties": {
-                                        "feedback": {},
-                                        "goal": {
-                                            "properties": {
-                                                "resource": ros_message_to_json_schema(Resource, "resource"),
-                                                "resources": {
-                                                    "items": {
-                                                        "properties": ros_message_to_json_schema(
-                                                            Resource, "resources"
-                                                        ),
-                                                        "type": "object",
-                                                    },
-                                                    "type": "array",
-                                                },
-                                                "device": {"type": "string"},
-                                                "devices": {"items": {"type": "string"}, "type": "array"},
-                                            },
-                                            "type": "object",
-                                        },
-                                        "result": {},
-                                    },
-                                    "title": "test_resource",
-                                    "type": "object",
-                                },
+                                "schema": test_resource_schema,
                                 "placeholder_keys": {
                                     "device": "unilabos_devices",
                                     "devices": "unilabos_devices",
@@ -838,6 +823,7 @@ class Registry:
                                         ("list", "unilabos.registry.placeholder_type:DeviceSlot"),
                                     ]
                                 },
+                                **({"always_free": True} if v.get("always_free") else {}),
                             }
                             for k, v in enhanced_info["action_methods"].items()
                             if k not in device_config["class"]["action_value_mappings"]
@@ -943,6 +929,7 @@ class Registry:
                     if is_valid:
                         results.append((file, data, device_ids))
                 except Exception as e:
+                    traceback.print_exc()
                     logger.warning(f"[UniLab Registry] 处理设备文件异常: {file}, 错误: {e}")
 
         # 线程安全地更新注册表

unilabos/registry/resources/bioyond/bottle_carriers.yaml

@@ -46,3 +46,16 @@ BIOYOND_PolymerStation_8StockCarrier:
   init_param_schema: {}
   registry_type: resource
   version: 1.0.0
+BIOYOND_PolymerStation_TipBox:
+  category:
+  - bottle_carriers
+  - tip_racks
+  class:
+    module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_TipBox
+    type: pylabrobot
+  description: BIOYOND_PolymerStation_TipBox (4x6布局，24个枪头孔位)
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  registry_type: resource
+  version: 1.0.0

unilabos/registry/resources/bioyond/bottles.yaml

@@ -82,14 +82,3 @@ BIOYOND_PolymerStation_Solution_Beaker:
   icon: ''
   init_param_schema: {}
   version: 1.0.0
-BIOYOND_PolymerStation_TipBox:
-  category:
-  - bottles
-  - tip_boxes
-  class:
-    module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_TipBox
-    type: pylabrobot
-  handles: []
-  icon: ''
-  init_param_schema: {}
-  version: 1.0.0

unilabos/resources/bioyond/bottle_carriers.py

@@ -1,4 +1,4 @@
-from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
+from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d, Container
 
 from unilabos.resources.itemized_carrier import BottleCarrier
 from unilabos.resources.bioyond.bottles import (
@@ -9,6 +9,28 @@ from unilabos.resources.bioyond.bottles import (
     BIOYOND_PolymerStation_Reagent_Bottle,
     BIOYOND_PolymerStation_Flask,
 )
+
+
+def BIOYOND_PolymerStation_Tip(name: str, size_x: float = 8.0, size_y: float = 8.0, size_z: float = 50.0) -> Container:
+    """创建单个枪头资源
+
+    Args:
+        name: 枪头名称
+        size_x: 枪头宽度 (mm)
+        size_y: 枪头长度 (mm)
+        size_z: 枪头高度 (mm)
+
+    Returns:
+        Container: 枪头容器
+    """
+    return Container(
+        name=name,
+        size_x=size_x,
+        size_y=size_y,
+        size_z=size_z,
+        category="tip",
+        model="BIOYOND_PolymerStation_Tip",
+    )
 # 命名约定：试剂瓶-Bottle，烧杯-Beaker，烧瓶-Flask,小瓶-Vial
 
 
@@ -322,3 +344,88 @@ def BIOYOND_Electrolyte_1BottleCarrier(name: str) -> BottleCarrier:
     carrier.num_items_z = 1
     carrier[0] = BIOYOND_PolymerStation_Solution_Beaker(f"{name}_beaker_1")
     return carrier
+
+
+def BIOYOND_PolymerStation_TipBox(
+    name: str,
+    size_x: float = 127.76,  # 枪头盒宽度
+    size_y: float = 85.48,   # 枪头盒长度
+    size_z: float = 100.0,   # 枪头盒高度
+    barcode: str = None,
+) -> BottleCarrier:
+    """创建4×6枪头盒 (24个枪头) - 使用 BottleCarrier 结构
+
+    Args:
+        name: 枪头盒名称
+        size_x: 枪头盒宽度 (mm)
+        size_y: 枪头盒长度 (mm)
+        size_z: 枪头盒高度 (mm)
+        barcode: 条形码
+
+    Returns:
+        BottleCarrier: 包含24个枪头孔位的枪头盒载架
+
+    布局说明:
+        - 4行×6列 (A-D, 1-6)
+        - 枪头孔位间距: 18mm (x方向) × 18mm (y方向)
+        - 起始位置居中对齐
+        - 索引顺序: 列优先 (0=A1, 1=B1, 2=C1, 3=D1, 4=A2, ...)
+    """
+    # 枪头孔位参数
+    num_cols = 6  # 1-6 (x方向)
+    num_rows = 4  # A-D (y方向)
+    tip_diameter = 8.0  # 枪头孔位直径
+    tip_spacing_x = 18.0  # 列间距 (增加到18mm，更宽松)
+    tip_spacing_y = 18.0  # 行间距 (增加到18mm，更宽松)
+
+    # 计算起始位置 (居中对齐)
+    total_width = (num_cols - 1) * tip_spacing_x + tip_diameter
+    total_height = (num_rows - 1) * tip_spacing_y + tip_diameter
+    start_x = (size_x - total_width) / 2
+    start_y = (size_y - total_height) / 2
+
+    # 使用 create_ordered_items_2d 创建孔位
+    # create_ordered_items_2d 返回的 key 是数字索引: 0, 1, 2, ...
+    # 顺序是列优先: 先y后x (即 0=A1, 1=B1, 2=C1, 3=D1, 4=A2, 5=B2, ...)
+    sites = create_ordered_items_2d(
+        klass=ResourceHolder,
+        num_items_x=num_cols,
+        num_items_y=num_rows,
+        dx=start_x,
+        dy=start_y,
+        dz=5.0,
+        item_dx=tip_spacing_x,
+        item_dy=tip_spacing_y,
+        size_x=tip_diameter,
+        size_y=tip_diameter,
+        size_z=50.0,  # 枪头深度
+    )
+
+    # 更新 sites 中每个 ResourceHolder 的名称
+    for k, v in sites.items():
+        v.name = f"{name}_{v.name}"
+
+    # 创建枪头盒载架
+    # 注意：不设置 category，使用默认的 "bottle_carrier"，这样前端会显示为完整的矩形载架
+    tip_box = BottleCarrier(
+        name=name,
+        size_x=size_x,
+        size_y=size_y,
+        size_z=size_z,
+        sites=sites,  # 直接使用数字索引的 sites
+        model="BIOYOND_PolymerStation_TipBox",
+    )
+
+    # 设置自定义属性
+    tip_box.barcode = barcode
+    tip_box.tip_count = 24  # 4行×6列
+    tip_box.num_items_x = num_cols
+    tip_box.num_items_y = num_rows
+    tip_box.num_items_z = 1
+
+    # ⭐ 枪头盒不需要放入子资源
+    # 与其他 carrier 不同，枪头盒在 Bioyond 中是一个整体
+    # 不需要追踪每个枪头的状态，保持为空的 ResourceHolder 即可
+    # 这样前端会显示24个空槽位，可以用于放置枪头
+
+    return tip_box

unilabos/resources/bioyond/bottles.py

@@ -116,7 +116,9 @@ def BIOYOND_PolymerStation_TipBox(
     size_z: float = 100.0,   # 枪头盒高度
     barcode: str = None,
 ):
-    """创建4×6枪头盒 (24个枪头)
+    """创建4×6枪头盒 (24个枪头) - 使用 BottleCarrier 结构
+
+    注意：此函数已弃用，请使用 bottle_carriers.py 中的版本
 
     Args:
         name: 枪头盒名称
@@ -126,55 +128,11 @@ def BIOYOND_PolymerStation_TipBox(
         barcode: 条形码
 
     Returns:
-        TipBoxCarrier: 包含24个枪头孔位的枪头盒
+        BottleCarrier: 包含24个枪头孔位的枪头盒载架
     """
-    from pylabrobot.resources import Container, Coordinate
-
-    # 创建枪头盒容器
-    tip_box = Container(
-        name=name,
-        size_x=size_x,
-        size_y=size_y,
-        size_z=size_z,
-        category="tip_rack",
-        model="BIOYOND_PolymerStation_TipBox_4x6",
-    )
-
-    # 设置自定义属性
-    tip_box.barcode = barcode
-    tip_box.tip_count = 24  # 4行×6列
-    tip_box.num_items_x = 6  # 6列
-    tip_box.num_items_y = 4  # 4行
-
-    # 创建24个枪头孔位 (4行×6列)
-    # 假设孔位间距为 9mm
-    tip_spacing_x = 9.0  # 列间距
-    tip_spacing_y = 9.0  # 行间距
-    start_x = 14.38  # 第一个孔位的x偏移
-    start_y = 11.24  # 第一个孔位的y偏移
-
-    for row in range(4):  # A, B, C, D
-        for col in range(6):  # 1-6
-            spot_name = f"{chr(65 + row)}{col + 1}"  # A1, A2, ..., D6
-            x = start_x + col * tip_spacing_x
-            y = start_y + row * tip_spacing_y
-
-            # 创建枪头孔位容器
-            tip_spot = Container(
-                name=spot_name,
-                size_x=8.0,  # 单个枪头孔位大小
-                size_y=8.0,
-                size_z=size_z - 10.0,  # 略低于盒子高度
-                category="tip_spot",
-            )
-
-            # 添加到枪头盒
-            tip_box.assign_child_resource(
-                tip_spot,
-                location=Coordinate(x=x, y=y, z=0)
-            )
-
-    return tip_box
+    # 重定向到 bottle_carriers.py 中的实现
+    from unilabos.resources.bioyond.bottle_carriers import BIOYOND_PolymerStation_TipBox as TipBox_Carrier
+    return TipBox_Carrier(name=name, size_x=size_x, size_y=size_y, size_z=size_z, barcode=barcode)
 
 
 def BIOYOND_PolymerStation_Flask(

unilabos/resources/container.py

@@ -1,10 +1,6 @@
-import json
 from typing import Dict, Any
 
 from pylabrobot.resources import Container
-from unilabos_msgs.msg import Resource
-
-from unilabos.ros.msgs.message_converter import convert_from_ros_msg
 
 
 class RegularContainer(Container):
@@ -16,12 +12,12 @@ class RegularContainer(Container):
             kwargs["size_y"] = 0
         if "size_z" not in kwargs:
             kwargs["size_z"] = 0
+
         self.kwargs = kwargs
-        self.state = {}
         super().__init__(*args, category="container", **kwargs)
 
     def load_state(self, state: Dict[str, Any]):
-        self.state = state
+        super().load_state(state)
 
 
 def get_regular_container(name="container"):
@@ -29,7 +25,6 @@ def get_regular_container(name="container"):
     r.category = "container"
     return r
 
-#
 # class RegularContainer(object):
 #     # 第一个参数必须是id传入
 #     # noinspection PyShadowingBuiltins
@@ -89,4 +84,4 @@ def get_regular_container(name="container"):
 #         return to_dict
 #
 #     def __str__(self):
-#         return f"{self.id}"
+#         return f"{self.id}"

unilabos/resources/graphio.py

@@ -76,7 +76,7 @@ def canonicalize_nodes_data(
             if sample_id:
                 logger.error(f"{node}的sample_id参数已弃用，sample_id: {sample_id}")
         for k in list(node.keys()):
-            if k not in ["id", "uuid", "name", "description", "schema", "model", "icon", "parent_uuid", "parent", "type", "class", "position", "config", "data", "children", "pose"]:
+            if k not in ["id", "uuid", "name", "description", "schema", "model", "icon", "parent_uuid", "parent", "type", "class", "position", "config", "data", "children", "pose", "extra"]:
                 v = node.pop(k)
                 node["config"][k] = v
     if outer_host_node_id is not None:
@@ -151,12 +151,40 @@ def canonicalize_links_ports(links: List[Dict[str, Any]], resource_tree_set: Res
     """
     # 构建 id 到 uuid 的映射
     id_to_uuid: Dict[str, str] = {}
+    uuid_to_id: Dict[str, str] = {}
     for node in resource_tree_set.all_nodes:
         id_to_uuid[node.res_content.id] = node.res_content.uuid
+        uuid_to_id[node.res_content.uuid] = node.res_content.id
+
+    # 第三遍处理：为每个 link 添加 source_uuid 和 target_uuid
+    for link in links:
+        source_id = link.get("source")
+        target_id = link.get("target")
+
+        # 添加 source_uuid
+        if source_id and source_id in id_to_uuid:
+            link["source_uuid"] = id_to_uuid[source_id]
+
+        # 添加 target_uuid
+        if target_id and target_id in id_to_uuid:
+            link["target_uuid"] = id_to_uuid[target_id]
+
+        source_uuid = link.get("source_uuid")
+        target_uuid = link.get("target_uuid")
+
+        # 添加 source_uuid
+        if source_uuid and source_uuid in uuid_to_id:
+            link["source"] = uuid_to_id[source_uuid]
+
+        # 添加 target_uuid
+        if target_uuid and target_uuid in uuid_to_id:
+            link["target"] = uuid_to_id[target_uuid]
 
     # 第一遍处理：将字符串类型的port转换为字典格式
     for link in links:
         port = link.get("port")
+        if port is None:
+            continue
         if link.get("type", "physical") == "physical":
             link["type"] = "fluid"
         if isinstance(port, int):
@@ -179,13 +207,15 @@ def canonicalize_links_ports(links: List[Dict[str, Any]], resource_tree_set: Res
             link["port"] = {link["source"]: None, link["target"]: None}
 
     # 构建边字典，键为(source节点, target节点)，值为对应的port信息
-    edges = {(link["source"], link["target"]): link["port"] for link in links}
+    edges = {(link["source"], link["target"]): link["port"] for link in links if link.get("port")}
 
     # 第二遍处理：填充反向边的dest信息
     delete_reverses = []
     for i, link in enumerate(links):
         s, t = link["source"], link["target"]
-        current_port = link["port"]
+        current_port = link.get("port")
+        if current_port is None:
+            continue
         if current_port.get(t) is None:
             reverse_key = (t, s)
             reverse_port = edges.get(reverse_key)
@@ -200,20 +230,6 @@ def canonicalize_links_ports(links: List[Dict[str, Any]], resource_tree_set: Res
                 current_port[t] = current_port[s]
     # 删除已被使用反向端口信息的反向边
     standardized_links = [link for i, link in enumerate(links) if i not in delete_reverses]
-
-    # 第三遍处理：为每个 link 添加 source_uuid 和 target_uuid
-    for link in standardized_links:
-        source_id = link.get("source")
-        target_id = link.get("target")
-
-        # 添加 source_uuid
-        if source_id and source_id in id_to_uuid:
-            link["source_uuid"] = id_to_uuid[source_id]
-
-        # 添加 target_uuid
-        if target_id and target_id in id_to_uuid:
-            link["target_uuid"] = id_to_uuid[target_id]
-
     return standardized_links
 
 
@@ -284,6 +300,8 @@ def modify_to_backend_format(data: list[dict[str, Any]]) -> list[dict[str, Any]]
             edge["sourceHandle"] = port[source]
         elif "source_port" in edge:
             edge["sourceHandle"] = edge.pop("source_port")
+        elif "source_handle" in edge:
+            edge["sourceHandle"] = edge.pop("source_handle")
         else:
             typ = edge.get("type")
             if typ == "communication":
@@ -292,6 +310,8 @@ def modify_to_backend_format(data: list[dict[str, Any]]) -> list[dict[str, Any]]
             edge["targetHandle"] = port[target]
         elif "target_port" in edge:
             edge["targetHandle"] = edge.pop("target_port")
+        elif "target_handle" in edge:
+            edge["targetHandle"] = edge.pop("target_handle")
         else:
             typ = edge.get("type")
             if typ == "communication":
@@ -759,9 +779,12 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
                     bottle = plr_material[number] = initialize_resource(
                         {"name": f'{detail["name"]}_{number}', "class": reverse_type_mapping[typeName][0]}, resource_type=ResourcePLR
                     )
-                    bottle.tracker.liquids = [
-                        (detail["name"], float(detail.get("quantity", 0)) if detail.get("quantity") else 0)
-                    ]
+                    # 只有具有 tracker 属性的容器才设置液体信息（如 Bottle, Well）
+                    # ResourceHolder 等不支持液体追踪的容器跳过
+                    if hasattr(bottle, "tracker"):
+                        bottle.tracker.liquids = [
+                            (detail["name"], float(detail.get("quantity", 0)) if detail.get("quantity") else 0)
+                        ]
                     bottle.code = detail.get("code", "")
                     logger.debug(f"  └─ [子物料] {detail['name']} → {plr_material.name}[{number}] (类型:{typeName})")
                 else:
@@ -770,9 +793,11 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
             # 只对有 capacity 属性的容器（液体容器）处理液体追踪
             if hasattr(plr_material, 'capacity'):
                 bottle = plr_material[0] if plr_material.capacity > 0 else plr_material
-                bottle.tracker.liquids = [
-                    (material["name"], float(material.get("quantity", 0)) if material.get("quantity") else 0)
-                ]
+                # 确保 bottle 有 tracker 属性才设置液体信息
+                if hasattr(bottle, "tracker"):
+                    bottle.tracker.liquids = [
+                        (material["name"], float(material.get("quantity", 0)) if material.get("quantity") else 0)
+                    ]
 
         plr_materials.append(plr_material)
 
@@ -801,24 +826,29 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
                 wh_name = loc.get("whName")
                 logger.debug(f"[物料位置] {unique_name} 尝试放置到 warehouse: {wh_name} (Bioyond坐标: x={loc.get('x')}, y={loc.get('y')}, z={loc.get('z')})")
 
+                # Bioyond坐标映射 (重要！): x→行(1=A,2=B...), y→列(1=01,2=02...), z→层(通常=1)
+                # 必须在warehouse映射之前先获取坐标，以便后续调整
+                x = loc.get("x", 1)  # 行号 (1-based: 1=A, 2=B, 3=C, 4=D)
+                y = loc.get("y", 1)  # 列号 (1-based: 1=01, 2=02, 3=03...)
+                z = loc.get("z", 1)  # 层号 (1-based, 通常为1)
+
                 # 特殊处理: Bioyond的"堆栈1"需要映射到"堆栈1左"或"堆栈1右"
-                # 根据列号(x)判断: 1-4映射到左侧, 5-8映射到右侧
+                # 根据列号(y)判断: 1-4映射到左侧, 5-8映射到右侧
                 if wh_name == "堆栈1":
-                    x_val = loc.get("x", 1)
-                    if 1 <= x_val <= 4:
+                    if 1 <= y <= 4:
                         wh_name = "堆栈1左"
-                    elif 5 <= x_val <= 8:
+                    elif 5 <= y <= 8:
                         wh_name = "堆栈1右"
+                        y = y - 4  # 调整列号: 5-8映射到1-4
                     else:
-                        logger.warning(f"物料 {material['name']} 的列号 x={x_val} 超出范围，无法映射到堆栈1左或堆栈1右")
+                        logger.warning(f"物料 {material['name']} 的列号 y={y} 超出范围，无法映射到堆栈1左或堆栈1右")
                         continue
 
                 # 特殊处理: Bioyond的"站内Tip盒堆栈"也需要进行拆分映射
                 if wh_name == "站内Tip盒堆栈":
-                    y_val = loc.get("y", 1)
-                    if y_val == 1:
+                    if y == 1:
                         wh_name = "站内Tip盒堆栈(右)"
-                    elif y_val in [2, 3]:
+                    elif y in [2, 3]:
                         wh_name = "站内Tip盒堆栈(左)"
                         y = y - 1  # 调整列号，因为左侧仓库对应的 Bioyond y=2 实际上是它的第1列
 
@@ -826,15 +856,6 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
                     warehouse = deck.warehouses[wh_name]
                     logger.debug(f"[Warehouse匹配] 找到warehouse: {wh_name} (容量: {warehouse.capacity}, 行×列: {warehouse.num_items_x}×{warehouse.num_items_y})")
 
-                    # Bioyond坐标映射 (重要！): x→行(1=A,2=B...), y→列(1=01,2=02...), z→层(通常=1)
-                    x = loc.get("x", 1)  # 行号 (1-based: 1=A, 2=B, 3=C, 4=D)
-                    y = loc.get("y", 1)  # 列号 (1-based: 1=01, 2=02, 3=03...)
-                    z = loc.get("z", 1)  # 层号 (1-based, 通常为1)
-
-                    # 如果是右侧堆栈，需要调整列号 (5→1, 6→2, 7→3, 8→4)
-                    if wh_name == "堆栈1右":
-                        y = y - 4  # 将5-8映射到1-4
-
                     # 特殊处理竖向warehouse（站内试剂存放堆栈、测量小瓶仓库）
                     # 这些warehouse使用 vertical-col-major 布局
                     if wh_name in ["站内试剂存放堆栈", "测量小瓶仓库(测密度)"]:

unilabos/resources/plr_additional_res_reg.py

@@ -18,3 +18,9 @@ def register():
     from unilabos.devices.liquid_handling.rviz_backend import UniLiquidHandlerRvizBackend
     from unilabos.devices.liquid_handling.laiyu.backend.laiyu_v_backend import UniLiquidHandlerLaiyuBackend
 
+    # noinspection PyUnresolvedReferences
+    from unilabos.resources.bioyond.decks import (
+        BIOYOND_PolymerReactionStation_Deck,
+        BIOYOND_PolymerPreparationStation_Deck,
+        BIOYOND_YB_Deck,
+    )

unilabos/resources/resource_tracker.py

@@ -5,6 +5,8 @@ from pydantic import BaseModel, field_serializer, field_validator, ValidationErr
 from pydantic import Field
 from typing import List, Tuple, Any, Dict, Literal, Optional, cast, TYPE_CHECKING, Union
 
+from typing_extensions import TypedDict
+
 from unilabos.resources.plr_additional_res_reg import register
 from unilabos.utils.log import logger
 
@@ -14,6 +16,33 @@ if TYPE_CHECKING:
 
 
 EXTRA_CLASS = "unilabos_resource_class"
+FRONTEND_POSE_EXTRA = "unilabos_frontend_pose_extra"
+EXTRA_SAMPLE_UUID = "sample_uuid"
+EXTRA_UNILABOS_SAMPLE_UUID = "unilabos_sample_uuid"
+
+# 函数参数名常量 - 用于自动注入 sample_uuids 列表
+PARAM_SAMPLE_UUIDS = "sample_uuids"
+
+# JSON Command 中的系统参数字段名
+JSON_UNILABOS_PARAM = "unilabos_param"
+
+# 返回值中的 samples 字段名
+RETURN_UNILABOS_SAMPLES = "unilabos_samples"
+
+# sample_uuids 参数类型 (用于 virtual bench 等设备添加 sample_uuids 参数)
+SampleUUIDsType = Dict[str, Optional["PLRResource"]]
+
+
+class LabSample(TypedDict):
+    sample_uuid: str
+    oss_path: str
+    extra: Dict[str, Any]
+
+
+class ResourceDictPositionSizeType(TypedDict):
+    depth: float
+    width: float
+    height: float
 
 
 class ResourceDictPositionSize(BaseModel):
@@ -22,18 +51,40 @@ class ResourceDictPositionSize(BaseModel):
     height: float = Field(description="Height", default=0.0)  # y
 
 
+class ResourceDictPositionScaleType(TypedDict):
+    x: float
+    y: float
+    z: float
+
+
 class ResourceDictPositionScale(BaseModel):
     x: float = Field(description="x scale", default=0.0)
     y: float = Field(description="y scale", default=0.0)
     z: float = Field(description="z scale", default=0.0)
 
 
+class ResourceDictPositionObjectType(TypedDict):
+    x: float
+    y: float
+    z: float
+
+
 class ResourceDictPositionObject(BaseModel):
     x: float = Field(description="X coordinate", default=0.0)
     y: float = Field(description="Y coordinate", default=0.0)
     z: float = Field(description="Z coordinate", default=0.0)
 
 
+class ResourceDictPositionType(TypedDict):
+    size: ResourceDictPositionSizeType
+    scale: ResourceDictPositionScaleType
+    layout: Literal["2d", "x-y", "z-y", "x-z"]
+    position: ResourceDictPositionObjectType
+    position3d: ResourceDictPositionObjectType
+    rotation: ResourceDictPositionObjectType
+    cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"]
+
+
 class ResourceDictPosition(BaseModel):
     size: ResourceDictPositionSize = Field(description="Resource size", default_factory=ResourceDictPositionSize)
     scale: ResourceDictPositionScale = Field(description="Resource scale", default_factory=ResourceDictPositionScale)
@@ -50,6 +101,25 @@ class ResourceDictPosition(BaseModel):
     cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"] = Field(
         description="Cross section type", default="rectangle"
     )
+    extra: Optional[Dict[str, Any]] = Field(description="Extra data", default=None)
+
+
+class ResourceDictType(TypedDict):
+    id: str
+    uuid: str
+    name: str
+    description: str
+    resource_schema: Dict[str, Any]
+    model: Dict[str, Any]
+    icon: str
+    parent_uuid: Optional[str]
+    parent: Optional["ResourceDictType"]
+    type: Union[Literal["device"], str]
+    klass: str
+    pose: ResourceDictPositionType
+    config: Dict[str, Any]
+    data: Dict[str, Any]
+    extra: Dict[str, Any]
 
 
 # 统一的资源字典模型，parent 自动序列化为 parent_uuid，children 不序列化
@@ -341,8 +411,18 @@ class ResourceTreeSet(object):
                 "deck": "deck",
                 "tip_rack": "tip_rack",
                 "tip_spot": "tip_spot",
+                "tip": "tip",  # 添加 tip 类型支持
                 "tube": "tube",
                 "bottle_carrier": "bottle_carrier",
+                "material_hole": "material_hole",
+                "container": "container",
+                "material_plate": "material_plate",
+                "electrode_sheet": "electrode_sheet",
+                "warehouse": "warehouse",
+                "magazine_holder": "magazine_holder",
+                "resource_group": "resource_group",
+                "trash": "trash",
+                "plate_adapter": "plate_adapter",
             }
             if source in replace_info:
                 return replace_info[source]
@@ -386,6 +466,7 @@ class ResourceTreeSet(object):
                 "position3d": raw_pos,
                 "rotation": d["rotation"],
                 "cross_section_type": d.get("cross_section_type", "rectangle"),
+                "extra": extra.get(FRONTEND_POSE_EXTRA)
             }
 
             # 先构建当前节点的字典（不包含children）
@@ -471,6 +552,7 @@ class ResourceTreeSet(object):
             name_to_uuid[node.res_content.name] = node.res_content.uuid
             all_states[node.res_content.name] = node.res_content.data
             name_to_extra[node.res_content.name] = node.res_content.extra
+            name_to_extra[node.res_content.name][FRONTEND_POSE_EXTRA] = node.res_content.pose.extra
             name_to_extra[node.res_content.name][EXTRA_CLASS] = node.res_content.klass
             for child in node.children:
                 collect_node_data(child, name_to_uuid, all_states, name_to_extra)
@@ -529,6 +611,7 @@ class ResourceTreeSet(object):
                 plr_resource = sub_cls.deserialize(plr_dict, allow_marshal=True)
                 from pylabrobot.resources import Coordinate
                 from pylabrobot.serializer import deserialize
+
                 location = cast(Coordinate, deserialize(plr_dict["location"]))
                 plr_resource.location = location
                 plr_resource.load_all_state(all_states)
@@ -538,7 +621,7 @@ class ResourceTreeSet(object):
                 plr_resources.append(plr_resource)
 
             except Exception as e:
-                logger.error(f"转换 PLR 资源失败: {e}")
+                logger.error(f"转换 PLR 资源失败: {e} {str(plr_dict)[:1000]}")
                 import traceback
 
                 logger.error(f"堆栈: {traceback.format_exc()}")
@@ -758,14 +841,27 @@ class ResourceTreeSet(object):
                                 f"从远端同步了 {added_count} 个物料子树"
                             )
                     else:
-                        # 情况2: 二级是物料（不是 device）
-                        if remote_child_name not in local_children_map:
-                            # 引入整个子树
-                            remote_child.res_content.parent = local_device.res_content
-                            local_device.children.append(remote_child)
-                            logger.info(f"Device '{remote_root_id}': 从远端同步物料子树 '{remote_child_name}'")
-                        else:
-                            logger.info(f"物料 '{remote_root_id}/{remote_child_name}' 已存在，跳过")
+                        # 二级物料已存在，比较三级子节点是否缺失
+                        local_material = local_children_map[remote_child_name]
+                        local_material_children_map = {child.res_content.name: child for child in
+                                                       local_material.children}
+                        added_count = 0
+                        for remote_sub in remote_child.children:
+                            remote_sub_name = remote_sub.res_content.name
+                            if remote_sub_name not in local_material_children_map:
+                                remote_sub.res_content.parent = local_material.res_content
+                                local_material.children.append(remote_sub)
+                                added_count += 1
+                            else:
+                                logger.info(
+                                    f"物料 '{remote_root_id}/{remote_child_name}/{remote_sub_name}' "
+                                    f"已存在，跳过"
+                                )
+                        if added_count > 0:
+                            logger.info(
+                                f"物料 '{remote_root_id}/{remote_child_name}': "
+                                f"从远端同步了 {added_count} 个子物料"
+                            )
             else:
                 # 情况1: 一级节点是物料（不是 device）
                 # 检查是否已存在

unilabos/ros/device_node_wrapper.py

@@ -44,8 +44,7 @@ def ros2_device_node(
     # 从属性中自动发现可发布状态
     if status_types is None:
         status_types = {}
-    if device_config is None:
-        raise ValueError("device_config cannot be None")
+    assert device_config is not None, "device_config cannot be None"
     if action_value_mappings is None:
         action_value_mappings = {}
     if hardware_interface is None:

unilabos/ros/nodes/base_device_node.py

@@ -4,8 +4,20 @@ import json
 import threading
 import time
 import traceback
-from typing import get_type_hints, TypeVar, Generic, Dict, Any, Type, TypedDict, Optional, List, TYPE_CHECKING, Union, \
-    Tuple
+from typing import (
+    get_type_hints,
+    TypeVar,
+    Generic,
+    Dict,
+    Any,
+    Type,
+    TypedDict,
+    Optional,
+    List,
+    TYPE_CHECKING,
+    Union,
+    Tuple,
+)
 
 from concurrent.futures import ThreadPoolExecutor
 import asyncio
@@ -48,6 +60,9 @@ from unilabos.resources.resource_tracker import (
     ResourceTreeSet,
     ResourceTreeInstance,
     ResourceDictInstance,
+    EXTRA_SAMPLE_UUID,
+    PARAM_SAMPLE_UUIDS,
+    JSON_UNILABOS_PARAM,
 )
 from unilabos.ros.utils.driver_creator import WorkstationNodeCreator, PyLabRobotCreator, DeviceClassCreator
 from rclpy.task import Task, Future
@@ -131,7 +146,7 @@ def init_wrapper(
     device_id: str,
     device_uuid: str,
     driver_class: type[T],
-    device_config: ResourceTreeInstance,
+    device_config: ResourceDictInstance,
     status_types: Dict[str, Any],
     action_value_mappings: Dict[str, Any],
     hardware_interface: Dict[str, Any],
@@ -216,14 +231,15 @@ class PropertyPublisher:
 
     def publish_property(self):
         try:
-            self.node.lab_logger().trace(f"【.publish_property】开始发布属性: {self.name}")
+            # self.node.lab_logger().trace(f"【.publish_property】开始发布属性: {self.name}")
             value = self.get_property()
             if self.print_publish:
-                self.node.lab_logger().trace(f"【.publish_property】发布 {self.msg_type}: {value}")
+                pass
+                # self.node.lab_logger().trace(f"【.publish_property】发布 {self.msg_type}: {value}")
             if value is not None:
                 msg = convert_to_ros_msg(self.msg_type, value)
                 self.publisher_.publish(msg)
-                self.node.lab_logger().trace(f"【.publish_property】属性 {self.name} 发布成功")
+                # self.node.lab_logger().trace(f"【.publish_property】属性 {self.name} 发布成功")
         except Exception as e:
             self.node.lab_logger().error(
                 f"【.publish_property】发布属性 {self.publisher_.topic} 出错: {str(e)}\n{traceback.format_exc()}"
@@ -263,6 +279,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
         self,
         driver_instance: T,
         device_id: str,
+        registry_name: str,
         device_uuid: str,
         status_types: Dict[str, Any],
         action_value_mappings: Dict[str, Any],
@@ -284,6 +301,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
         """
         self.driver_instance = driver_instance
         self.device_id = device_id
+        self.registry_name = registry_name
         self.uuid = device_uuid
         self.publish_high_frequency = False
         self.callback_group = ReentrantCallbackGroup()
@@ -361,6 +379,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
             from pylabrobot.resources.deck import Deck
             from pylabrobot.resources import Coordinate
             from pylabrobot.resources import Plate
+
             # 物料传输到对应的node节点
             client = self._resource_clients["c2s_update_resource_tree"]
             request = SerialCommand.Request()
@@ -388,33 +407,29 @@ class BaseROS2DeviceNode(Node, Generic[T]):
             rts: ResourceTreeSet = ResourceTreeSet.from_raw_dict_list(input_resources)
             parent_resource = None
             if bind_parent_id != self.node_name:
-                parent_resource = self.resource_tracker.figure_resource(
-                    {"name": bind_parent_id}
-                )
+                parent_resource = self.resource_tracker.figure_resource({"name": bind_parent_id})
                 for r in rts.root_nodes:
                     # noinspection PyUnresolvedReferences
                     r.res_content.parent_uuid = parent_resource.unilabos_uuid
             else:
                 for r in rts.root_nodes:
                     r.res_content.parent_uuid = self.uuid
-
-            if len(LIQUID_INPUT_SLOT) and LIQUID_INPUT_SLOT[0] == -1 and len(rts.root_nodes) == 1 and isinstance(rts.root_nodes[0], RegularContainer):
+            rts_plr_instances = rts.to_plr_resources()
+            if len(rts.root_nodes) == 1 and isinstance(rts_plr_instances[0], RegularContainer):
                 # noinspection PyTypeChecker
-                container_instance: RegularContainer = rts.root_nodes[0]
+                container_instance: RegularContainer = rts_plr_instances[0]
                 found_resources = self.resource_tracker.figure_resource(
-                    {"id": container_instance.name}, try_mode=True
+                    {"name": container_instance.name}, try_mode=True
                 )
                 if not len(found_resources):
                     self.resource_tracker.add_resource(container_instance)
                     logger.info(f"添加物料{container_instance.name}到资源跟踪器")
                 else:
-                    assert (
-                        len(found_resources) == 1
-                    ), f"找到多个同名物料: {container_instance.name}, 请检查物料系统"
+                    assert len(found_resources) == 1, f"找到多个同名物料: {container_instance.name}, 请检查物料系统"
                     found_resource = found_resources[0]
                     if isinstance(found_resource, RegularContainer):
                         logger.info(f"更新物料{container_instance.name}的数据{found_resource.state}")
-                        found_resource.state.update(json.loads(container_instance.state))
+                        found_resource.state.update(container_instance.state)
                     elif isinstance(found_resource, dict):
                         raise ValueError("已不支持 字典 版本的RegularContainer")
                     else:
@@ -422,14 +437,16 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                             f"更新物料{container_instance.name}出现不支持的数据类型{type(found_resource)} {found_resource}"
                         )
             # noinspection PyUnresolvedReferences
-            request.command = json.dumps({
-                "action": "add",
-                "data": {
-                    "data": rts.dump(),
-                    "mount_uuid": parent_resource.unilabos_uuid if parent_resource is not None else "",
-                    "first_add": False,
-                },
-            })
+            request.command = json.dumps(
+                {
+                    "action": "add",
+                    "data": {
+                        "data": rts.dump(),
+                        "mount_uuid": parent_resource.unilabos_uuid if parent_resource is not None else self.uuid,
+                        "first_add": False,
+                    },
+                }
+            )
             tree_response: SerialCommand.Response = await client.call_async(request)
             uuid_maps = json.loads(tree_response.response)
             plr_instances = rts.to_plr_resources()
@@ -443,7 +460,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
             }
             res.response = json.dumps(final_response)
             # 如果driver自己就有assign的方法，那就使用driver自己的assign方法
-            if hasattr(self.driver_instance, "create_resource"):
+            if hasattr(self.driver_instance, "create_resource") and self.node_name != "host_node":
                 create_resource_func = getattr(self.driver_instance, "create_resource")
                 try:
                     ret = create_resource_func(
@@ -471,7 +488,9 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                         if len(ADD_LIQUID_TYPE) == 1 and len(LIQUID_VOLUME) == 1 and len(LIQUID_INPUT_SLOT) > 1:
                             ADD_LIQUID_TYPE = ADD_LIQUID_TYPE * len(LIQUID_INPUT_SLOT)
                             LIQUID_VOLUME = LIQUID_VOLUME * len(LIQUID_INPUT_SLOT)
-                            self.lab_logger().warning(f"增加液体资源时，数量为1，自动补全为 {len(LIQUID_INPUT_SLOT)} 个")
+                            self.lab_logger().warning(
+                                f"增加液体资源时，数量为1，自动补全为 {len(LIQUID_INPUT_SLOT)} 个"
+                            )
                         for liquid_type, liquid_volume, liquid_input_slot in zip(
                             ADD_LIQUID_TYPE, LIQUID_VOLUME, LIQUID_INPUT_SLOT
                         ):
@@ -490,9 +509,15 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                             input_wells = []
                             for r in LIQUID_INPUT_SLOT:
                                 input_wells.append(plr_instance.children[r])
-                        final_response["liquid_input_resource_tree"] = ResourceTreeSet.from_plr_resources(input_wells).dump()
+                        final_response["liquid_input_resource_tree"] = ResourceTreeSet.from_plr_resources(
+                            input_wells
+                        ).dump()
                         res.response = json.dumps(final_response)
-                    if issubclass(parent_resource.__class__, Deck) and hasattr(parent_resource, "assign_child_at_slot") and "slot" in other_calling_param:
+                    if (
+                        issubclass(parent_resource.__class__, Deck)
+                        and hasattr(parent_resource, "assign_child_at_slot")
+                        and "slot" in other_calling_param
+                    ):
                         other_calling_param["slot"] = int(other_calling_param["slot"])
                         parent_resource.assign_child_at_slot(plr_instance, **other_calling_param)
                     else:
@@ -507,14 +532,16 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                     rts_with_parent = ResourceTreeSet.from_plr_resources([parent_resource])
                     if rts_with_parent.root_nodes[0].res_content.uuid_parent is None:
                         rts_with_parent.root_nodes[0].res_content.parent_uuid = self.uuid
-                    request.command = json.dumps({
-                        "action": "add",
-                        "data": {
-                            "data": rts_with_parent.dump(),
-                            "mount_uuid": rts_with_parent.root_nodes[0].res_content.uuid_parent,
-                            "first_add": False,
-                        },
-                    })
+                    request.command = json.dumps(
+                        {
+                            "action": "add",
+                            "data": {
+                                "data": rts_with_parent.dump(),
+                                "mount_uuid": rts_with_parent.root_nodes[0].res_content.uuid_parent,
+                                "first_add": False,
+                            },
+                        }
+                    )
                     tree_response: SerialCommand.Response = await client.call_async(request)
                     uuid_maps = json.loads(tree_response.response)
                     self.resource_tracker.loop_update_uuid(input_resources, uuid_maps)
@@ -811,7 +838,9 @@ class BaseROS2DeviceNode(Node, Generic[T]):
             }
 
         def _handle_update(
-            plr_resources: List[Union[ResourcePLR, ResourceDictInstance]], tree_set: ResourceTreeSet, additional_add_params: Dict[str, Any]
+            plr_resources: List[Union[ResourcePLR, ResourceDictInstance]],
+            tree_set: ResourceTreeSet,
+            additional_add_params: Dict[str, Any],
         ) -> Tuple[Dict[str, Any], List[ResourcePLR]]:
             """
             处理资源更新操作的内部函数
@@ -836,7 +865,10 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                 original_parent_resource = original_instance.parent
                 original_parent_resource_uuid = getattr(original_parent_resource, "unilabos_uuid", None)
                 target_parent_resource_uuid = tree.root_node.res_content.uuid_parent
-                not_same_parent = original_parent_resource_uuid != target_parent_resource_uuid and original_parent_resource is not None
+                not_same_parent = (
+                    original_parent_resource_uuid != target_parent_resource_uuid
+                    and original_parent_resource is not None
+                )
                 old_name = original_instance.name
                 new_name = plr_resource.name
                 parent_appended = False
@@ -872,11 +904,35 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                 else:
                     # 判断是否变更了resource_site，重新登记
                     target_site = original_instance.unilabos_extra.get("update_resource_site")
-                    sites = original_instance.parent.sites if original_instance.parent is not None and hasattr(original_instance.parent, "sites") else None
-                    site_names = list(original_instance.parent._ordering.keys()) if original_instance.parent is not None and hasattr(original_instance.parent, "sites") else []
+                    sites = (
+                        original_instance.parent.sites
+                        if original_instance.parent is not None and hasattr(original_instance.parent, "sites")
+                        else None
+                    )
+                    site_names = (
+                        list(original_instance.parent._ordering.keys())
+                        if original_instance.parent is not None and hasattr(original_instance.parent, "sites")
+                        else []
+                    )
                     if target_site is not None and sites is not None and site_names is not None:
-                        site_index = sites.index(original_instance)
-                        site_name = site_names[site_index]
+                        site_index = None
+                        try:
+                            # sites 可能是 Resource 列表或 dict 列表 (如 PRCXI9300Deck)
+                            # 只有itemized_carrier在使用，准备弃用
+                            site_index = sites.index(original_instance)
+                        except ValueError:
+                            # dict 类型的 sites: 通过name匹配
+                            for idx, site in enumerate(sites):
+                                if original_instance.name == site["occupied_by"]:
+                                    site_index = idx
+                                    break
+                                elif (original_instance.location.x == site["position"]["x"] and original_instance.location.y == site["position"]["y"] and original_instance.location.z == site["position"]["z"]):
+                                    site_index = idx
+                                    break
+                        if site_index is None:
+                            site_name = None
+                        else:
+                            site_name = site_names[site_index]
                         if site_name != target_site:
                             parent = self.transfer_to_new_resource(original_instance, tree, additional_add_params)
                             if parent is not None:
@@ -884,6 +940,14 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                 parent_appended = True
 
                 # 加载状态
+                # noinspection PyProtectedMember
+                original_instance._size_x = plr_resource._size_x
+                # noinspection PyProtectedMember
+                original_instance._size_y = plr_resource._size_y
+                # noinspection PyProtectedMember
+                original_instance._size_z = plr_resource._size_z
+                # noinspection PyProtectedMember
+                original_instance._local_size_z = plr_resource._local_size_z
                 original_instance.location = plr_resource.location
                 original_instance.rotation = plr_resource.rotation
                 original_instance.barcode = plr_resource.barcode
@@ -910,9 +974,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                 action = i.get("action")  # remove, add, update
                 resources_uuid: List[str] = i.get("data")  # 资源数据
                 additional_add_params = i.get("additional_add_params", {})  # 额外参数
-                self.lab_logger().trace(
-                    f"[资源同步] 处理 {action}, " f"resources count: {len(resources_uuid)}"
-                )
+                self.lab_logger().trace(f"[资源同步] 处理 {action}, " f"resources count: {len(resources_uuid)}")
                 tree_set = None
                 if action in ["add", "update"]:
                     tree_set = await self.get_resource(
@@ -939,10 +1001,14 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                 tree.root_node.res_content.parent_uuid = self.uuid
                         r = SerialCommand.Request()
                         r.command = json.dumps(
-                            {"data": {"data": new_tree_set.dump()}, "action": "update"})  # 和Update Resource一致
+                            {"data": {"data": new_tree_set.dump()}, "action": "update"}
+                        )  # 和Update Resource一致
                         response: SerialCommand_Response = await self._resource_clients[
-                            "c2s_update_resource_tree"].call_async(r)  # type: ignore
-                        self.lab_logger().info(f"确认资源云端 Add 结果: {response.response}")
+                            "c2s_update_resource_tree"
+                        ].call_async(
+                            r
+                        )  # type: ignore
+                        self.lab_logger().trace(f"确认资源云端 Add 结果: {response.response}")
                         results.append(result)
                     elif action == "update":
                         if tree_set is None:
@@ -961,10 +1027,14 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                     tree.root_node.res_content.parent_uuid = self.uuid
                             r = SerialCommand.Request()
                             r.command = json.dumps(
-                                {"data": {"data": new_tree_set.dump()}, "action": "update"})  # 和Update Resource一致
+                                {"data": {"data": new_tree_set.dump()}, "action": "update"}
+                            )  # 和Update Resource一致
                             response: SerialCommand_Response = await self._resource_clients[
-                                "c2s_update_resource_tree"].call_async(r)  # type: ignore
-                            self.lab_logger().info(f"确认资源云端 Update 结果: {response.response}")
+                                "c2s_update_resource_tree"
+                            ].call_async(
+                                r
+                            )  # type: ignore
+                            self.lab_logger().trace(f"确认资源云端 Update 结果: {response.response}")
                         results.append(result)
                     elif action == "remove":
                         result = _handle_remove(resources_uuid)
@@ -1110,6 +1180,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                     "machine_name": BasicConfig.machine_name,
                     "type": "slave",
                     "edge_device_id": self.device_id,
+                    "registry_name": self.registry_name,
                 }
             },
             ensure_ascii=False,
@@ -1333,7 +1404,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                         resource_id=resource_data["id"], with_children=True
                                     )
                                     if "sample_id" in resource_data:
-                                        plr_resource.unilabos_extra["sample_uuid"] = resource_data["sample_id"]
+                                        plr_resource.unilabos_extra[EXTRA_SAMPLE_UUID] = resource_data["sample_id"]
                                     queried_resources[idx] = plr_resource
                                 else:
                                     uuid_indices.append((idx, unilabos_uuid, resource_data))
@@ -1346,7 +1417,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                 for i, (idx, _, resource_data) in enumerate(uuid_indices):
                                     plr_resource = plr_resources[i]
                                     if "sample_id" in resource_data:
-                                        plr_resource.unilabos_extra["sample_uuid"] = resource_data["sample_id"]
+                                        plr_resource.unilabos_extra[EXTRA_SAMPLE_UUID] = resource_data["sample_id"]
                                     queried_resources[idx] = plr_resource
 
                             self.lab_logger().debug(f"资源查询结果: 共 {len(queried_resources)} 个资源")
@@ -1354,7 +1425,9 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                             # 通过资源跟踪器获取本地实例
                             final_resources = queried_resources if is_sequence else queried_resources[0]
                             if not is_sequence:
-                                plr = self.resource_tracker.figure_resource({"name": final_resources.name}, try_mode=False)
+                                plr = self.resource_tracker.figure_resource(
+                                    {"name": final_resources.name}, try_mode=False
+                                )
                                 # 保留unilabos_extra
                                 if hasattr(final_resources, "unilabos_extra") and hasattr(plr, "unilabos_extra"):
                                     plr.unilabos_extra = getattr(final_resources, "unilabos_extra", {}).copy()
@@ -1393,8 +1466,12 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                 execution_success = True
                             except Exception as _:
                                 execution_error = traceback.format_exc()
-                                error(f"异步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{str(action_kwargs)[:1000]}")
-                                trace(f"异步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{action_kwargs}")
+                                error(
+                                    f"异步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{str(action_kwargs)[:1000]}"
+                                )
+                                trace(
+                                    f"异步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{action_kwargs}"
+                                )
 
                         future = ROS2DeviceNode.run_async_func(ACTION, trace_error=False, **action_kwargs)
                         future.add_done_callback(_handle_future_exception)
@@ -1414,9 +1491,11 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                         except Exception as _:
                             execution_error = traceback.format_exc()
                             error(
-                                f"同步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{str(action_kwargs)[:1000]}")
+                                f"同步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{str(action_kwargs)[:1000]}"
+                            )
                             trace(
-                                f"同步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{action_kwargs}")
+                                f"同步任务 {ACTION.__name__} 报错了\n{traceback.format_exc()}\n原始输入：{action_kwargs}"
+                            )
 
                     future.add_done_callback(_handle_future_exception)
 
@@ -1483,11 +1562,18 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                             if isinstance(rs, list):
                                 for r in rs:
                                     res = self.resource_tracker.parent_resource(r)  # 获取 resource 对象
+                                    if res is None:
+                                        res = rs
+                                    if id(res) not in seen:
+                                        seen.add(id(res))
+                                        unique_resources.append(res)
                             else:
                                 res = self.resource_tracker.parent_resource(rs)
-                            if id(res) not in seen:
-                                seen.add(id(res))
-                                unique_resources.append(res)
+                                if res is None:
+                                    res = rs
+                                if id(res) not in seen:
+                                    seen.add(id(res))
+                                    unique_resources.append(res)
 
                         # 使用新的资源树接口
                         if unique_resources:
@@ -1539,20 +1625,37 @@ class BaseROS2DeviceNode(Node, Generic[T]):
         try:
             function_name = target["function_name"]
             function_args = target["function_args"]
+            # 获取 unilabos 系统参数
+            unilabos_param: Dict[str, Any] = target[JSON_UNILABOS_PARAM]
+
             assert isinstance(function_args, dict), "执行动作时JSON必须为dict类型\n原JSON: {string}"
             function = getattr(self.driver_instance, function_name)
             assert callable(
                 function
             ), f"执行动作时JSON中的function_name对应的函数不可调用: {function_name}\n原JSON: {string}"
 
-            # 处理 ResourceSlot 类型参数
-            args_list = default_manager._analyze_method_signature(function)["args"]
+            # 处理参数（包含 unilabos 系统参数如 sample_uuids）
+            args_list = default_manager._analyze_method_signature(function, skip_unilabos_params=False)["args"]
             for arg in args_list:
                 arg_name = arg["name"]
                 arg_type = arg["type"]
 
                 # 跳过不在 function_args 中的参数
                 if arg_name not in function_args:
+                    # 处理 sample_uuids 参数注入
+                    if arg_name == PARAM_SAMPLE_UUIDS:
+                        raw_sample_uuids = unilabos_param.get(PARAM_SAMPLE_UUIDS, {})
+                        # 将 material uuid 转换为 resource 实例
+                        # key: sample_uuid, value: material_uuid -> resource 实例
+                        resolved_sample_uuids: Dict[str, Any] = {}
+                        for sample_uuid, material_uuid in raw_sample_uuids.items():
+                            if material_uuid and self.resource_tracker:
+                                resource = self.resource_tracker.uuid_to_resources.get(material_uuid)
+                                resolved_sample_uuids[sample_uuid] = resource if resource else material_uuid
+                            else:
+                                resolved_sample_uuids[sample_uuid] = material_uuid
+                        function_args[PARAM_SAMPLE_UUIDS] = resolved_sample_uuids
+                        self.lab_logger().debug(f"[JsonCommand] 注入 {PARAM_SAMPLE_UUIDS}: {resolved_sample_uuids}")
                     continue
 
                 # 处理单个 ResourceSlot
@@ -1582,6 +1685,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                 )
                                 raise JsonCommandInitError(f"ResourceSlot列表参数转换失败: {arg_name}")
 
+            # todo: 默认反报送
             return function(**function_args)
         except KeyError as ex:
             raise JsonCommandInitError(
@@ -1601,21 +1705,23 @@ class BaseROS2DeviceNode(Node, Generic[T]):
             raise ValueError("至少需要提供一个 UUID")
 
         uuids_list = list(uuids)
-        future = self._resource_clients["c2s_update_resource_tree"].call_async(SerialCommand.Request(
-            command=json.dumps(
-                {
-                    "data": {"data": uuids_list, "with_children": True},
-                    "action": "get",
-                }
+        future = self._resource_clients["c2s_update_resource_tree"].call_async(
+            SerialCommand.Request(
+                command=json.dumps(
+                    {
+                        "data": {"data": uuids_list, "with_children": True},
+                        "action": "get",
+                    }
+                )
             )
-        ))
+        )
 
         # 等待结果（使用while循环，每次sleep 0.05秒，最多等待30秒）
         timeout = 30.0
         elapsed = 0.0
         while not future.done() and elapsed < timeout:
-            time.sleep(0.05)
-            elapsed += 0.05
+            time.sleep(0.02)
+            elapsed += 0.02
 
         if not future.done():
             raise Exception(f"资源查询超时: {uuids_list}")
@@ -1666,6 +1772,9 @@ class BaseROS2DeviceNode(Node, Generic[T]):
         try:
             function_name = target["function_name"]
             function_args = target["function_args"]
+            # 获取 unilabos 系统参数
+            unilabos_param: Dict[str, Any] = target.get(JSON_UNILABOS_PARAM, {})
+
             assert isinstance(function_args, dict), "执行动作时JSON必须为dict类型\n原JSON: {string}"
             function = getattr(self.driver_instance, function_name)
             assert callable(
@@ -1675,14 +1784,30 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                 function
             ), f"执行动作时JSON中的function并非异步: {function_name}\n原JSON: {string}"
 
-            # 处理 ResourceSlot 类型参数
-            args_list = default_manager._analyze_method_signature(function)["args"]
+            # 处理参数（包含 unilabos 系统参数如 sample_uuids）
+            args_list = default_manager._analyze_method_signature(function, skip_unilabos_params=False)["args"]
             for arg in args_list:
                 arg_name = arg["name"]
                 arg_type = arg["type"]
 
                 # 跳过不在 function_args 中的参数
                 if arg_name not in function_args:
+                    # 处理 sample_uuids 参数注入
+                    if arg_name == PARAM_SAMPLE_UUIDS:
+                        raw_sample_uuids = unilabos_param.get(PARAM_SAMPLE_UUIDS, {})
+                        # 将 material uuid 转换为 resource 实例
+                        # key: sample_uuid, value: material_uuid -> resource 实例
+                        resolved_sample_uuids: Dict[str, Any] = {}
+                        for sample_uuid, material_uuid in raw_sample_uuids.items():
+                            if material_uuid and self.resource_tracker:
+                                resource = self.resource_tracker.uuid_to_resources.get(material_uuid)
+                                resolved_sample_uuids[sample_uuid] = resource if resource else material_uuid
+                            else:
+                                resolved_sample_uuids[sample_uuid] = material_uuid
+                        function_args[PARAM_SAMPLE_UUIDS] = resolved_sample_uuids
+                        self.lab_logger().debug(
+                            f"[JsonCommandAsync] 注入 {PARAM_SAMPLE_UUIDS}: {resolved_sample_uuids}"
+                        )
                     continue
 
                 # 处理单个 ResourceSlot
@@ -1907,6 +2032,7 @@ class ROS2DeviceNode:
 
         if driver_is_ros:
             driver_params["device_id"] = device_id
+            driver_params["registry_name"] = device_config.res_content.klass
             driver_params["resource_tracker"] = self.resource_tracker
         self._driver_instance = self._driver_creator.create_instance(driver_params)
         if self._driver_instance is None:
@@ -1924,6 +2050,7 @@ class ROS2DeviceNode:
                 children=children,
                 driver_instance=self._driver_instance,  # type: ignore
                 device_id=device_id,
+                registry_name=device_config.res_content.klass,
                 device_uuid=device_uuid,
                 status_types=status_types,
                 action_value_mappings=action_value_mappings,
@@ -1935,6 +2062,7 @@ class ROS2DeviceNode:
             self._ros_node = BaseROS2DeviceNode(
                 driver_instance=self._driver_instance,
                 device_id=device_id,
+                registry_name=device_config.res_content.klass,
                 device_uuid=device_uuid,
                 status_types=status_types,
                 action_value_mappings=action_value_mappings,
@@ -1943,6 +2071,7 @@ class ROS2DeviceNode:
                 resource_tracker=self.resource_tracker,
             )
         self._ros_node: BaseROS2DeviceNode
+        # 将注册表类型名传递给BaseROS2DeviceNode,用于slave上报
         self._ros_node.lab_logger().info(f"初始化完成 {self._ros_node.uuid} {self.driver_is_ros}")
         self.driver_instance._ros_node = self._ros_node  # type: ignore
         self.driver_instance._execute_driver_command = self._ros_node._execute_driver_command  # type: ignore
@@ -1960,7 +2089,9 @@ class ROS2DeviceNode:
             asyncio.set_event_loop(loop)
             loop.run_forever()
 
-        ROS2DeviceNode._asyncio_loop_thread = threading.Thread(target=run_event_loop, daemon=True, name="ROS2DeviceNode")
+        ROS2DeviceNode._asyncio_loop_thread = threading.Thread(
+            target=run_event_loop, daemon=True, name="ROS2DeviceNode"
+        )
         ROS2DeviceNode._asyncio_loop_thread.start()
         logger.info(f"循环线程已启动")
 

unilabos/ros/nodes/presets/camera.py

@@ -6,12 +6,13 @@ from cv_bridge import CvBridge
 from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode, DeviceNodeResourceTracker
 
 class VideoPublisher(BaseROS2DeviceNode):
-    def __init__(self, device_id='video_publisher', device_uuid='', camera_index=0, period: float = 0.1, resource_tracker: DeviceNodeResourceTracker = None):
+    def __init__(self, device_id='video_publisher', registry_name="", device_uuid='', camera_index=0, period: float = 0.1, resource_tracker: DeviceNodeResourceTracker = None):
         # 初始化BaseROS2DeviceNode，使用自身作为driver_instance
         BaseROS2DeviceNode.__init__(
             self,
             driver_instance=self,
             device_id=device_id,
+            registry_name=registry_name,
             device_uuid=device_uuid,
             status_types={},
             action_value_mappings={},

unilabos/ros/nodes/presets/controller_node.py

@@ -10,6 +10,7 @@ class ControllerNode(BaseROS2DeviceNode):
     def __init__(
         self,
         device_id: str,
+        registry_name: str,
         controller_func: Callable,
         update_rate: float,
         inputs: Dict[str, Dict[str, type | str]],
@@ -51,6 +52,7 @@ class ControllerNode(BaseROS2DeviceNode):
             self,
             driver_instance=self,
             device_id=device_id,
+            registry_name=registry_name,
             status_types=status_types,
             action_value_mappings=action_value_mappings,
             hardware_interface=hardware_interface,

unilabos/ros/nodes/presets/host_node.py

@@ -1,17 +1,17 @@
 import collections
-from dataclasses import dataclass, field
 import json
 import threading
 import time
 import traceback
 import uuid
+from dataclasses import dataclass, field
 from typing import TYPE_CHECKING, Optional, Dict, Any, List, ClassVar, Set, Union
-from typing_extensions import TypedDict
 
 from action_msgs.msg import GoalStatus
 from geometry_msgs.msg import Point
 from rclpy.action import ActionClient, get_action_server_names_and_types_by_node
 from rclpy.service import Service
+from typing_extensions import TypedDict
 from unilabos_msgs.msg import Resource  # type: ignore
 from unilabos_msgs.srv import (
     ResourceAdd,
@@ -23,10 +23,20 @@ from unilabos_msgs.srv import (
 from unilabos_msgs.srv._serial_command import SerialCommand_Request, SerialCommand_Response
 from unique_identifier_msgs.msg import UUID
 
+from unilabos.registry.placeholder_type import ResourceSlot, DeviceSlot
 from unilabos.registry.registry import lab_registry
 from unilabos.resources.container import RegularContainer
 from unilabos.resources.graphio import initialize_resource
 from unilabos.resources.registry import add_schema
+from unilabos.resources.resource_tracker import (
+    ResourceDict,
+    ResourceDictInstance,
+    ResourceTreeSet,
+    ResourceTreeInstance,
+    RETURN_UNILABOS_SAMPLES,
+    JSON_UNILABOS_PARAM,
+    PARAM_SAMPLE_UUIDS, SampleUUIDsType, LabSample,
+)
 from unilabos.ros.initialize_device import initialize_device_from_dict
 from unilabos.ros.msgs.message_converter import (
     get_msg_type,
@@ -37,17 +47,11 @@ from unilabos.ros.msgs.message_converter import (
 )
 from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode, ROS2DeviceNode, DeviceNodeResourceTracker
 from unilabos.ros.nodes.presets.controller_node import ControllerNode
-from unilabos.resources.resource_tracker import (
-    ResourceDict,
-    ResourceDictInstance,
-    ResourceTreeSet,
-    ResourceTreeInstance,
-)
 from unilabos.utils import logger
 from unilabos.utils.exception import DeviceClassInvalid
 from unilabos.utils.log import warning
 from unilabos.utils.type_check import serialize_result_info
-from unilabos.registry.placeholder_type import ResourceSlot, DeviceSlot
+from unilabos.config.config import BasicConfig
 
 if TYPE_CHECKING:
     from unilabos.app.ws_client import QueueItem
@@ -60,7 +64,8 @@ class DeviceActionStatus:
 
 class TestResourceReturn(TypedDict):
     resources: List[List[ResourceDict]]
-    devices: List[DeviceSlot]
+    devices: List[Dict[str, Any]]
+    unilabos_samples: List[LabSample]
 
 
 class TestLatencyReturn(TypedDict):
@@ -245,6 +250,7 @@ class HostNode(BaseROS2DeviceNode):
             self,
             driver_instance=self,
             device_id=device_id,
+            registry_name="host_node",
             device_uuid=host_node_dict["uuid"],
             status_types={},
             action_value_mappings=lab_registry.device_type_registry["host_node"]["class"]["action_value_mappings"],
@@ -299,7 +305,8 @@ class HostNode(BaseROS2DeviceNode):
         }  # 用来存储多个ActionClient实例
         self._action_value_mappings: Dict[str, Dict] = (
             {}
-        )  # 用来存储多个ActionClient的type, goal, feedback, result的变量名映射关系
+        )  # device_id -> action_value_mappings(本地+远程设备统一存储)
+        self._slave_registry_configs: Dict[str, Dict] = {}  # registry_name -> registry_config(含action_value_mappings)
         self._goals: Dict[str, Any] = {}  # 用来存储多个目标的状态
         self._online_devices: Set[str] = {f"{self.namespace}/{device_id}"}  # 用于跟踪在线设备
         self._last_discovery_time = 0.0  # 上次设备发现的时间
@@ -633,6 +640,8 @@ class HostNode(BaseROS2DeviceNode):
         self.device_machine_names[device_id] = "本地"
         self.devices_instances[device_id] = d
         # noinspection PyProtectedMember
+        self._action_value_mappings[device_id] = d._ros_node._action_value_mappings
+        # noinspection PyProtectedMember
         for action_name, action_value_mapping in d._ros_node._action_value_mappings.items():
             if action_name.startswith("auto-") or str(action_value_mapping.get("type", "")).startswith(
                 "UniLabJsonCommand"
@@ -755,6 +764,7 @@ class HostNode(BaseROS2DeviceNode):
         item: "QueueItem",
         action_type: str,
         action_kwargs: Dict[str, Any],
+        sample_material: Dict[str, str],
         server_info: Optional[Dict[str, Any]] = None,
     ) -> None:
         """
@@ -768,18 +778,29 @@ class HostNode(BaseROS2DeviceNode):
         u = uuid.UUID(item.job_id)
         device_id = item.device_id
         action_name = item.action_name
+
+        if BasicConfig.test_mode:
+            action_id = f"/devices/{device_id}/{action_name}"
+            self.lab_logger().info(
+                f"[TEST MODE] 模拟执行: {action_id} (job={item.job_id[:8]}), 参数: {str(action_kwargs)[:500]}"
+            )
+            # 根据注册表 handles 构建模拟返回值
+            mock_return = self._build_test_mode_return(device_id, action_name, action_kwargs)
+            self._handle_test_mode_result(item, action_id, mock_return)
+            return
+
         if action_type.startswith("UniLabJsonCommand"):
             if action_name.startswith("auto-"):
                 action_name = action_name[5:]
             action_id = f"/devices/{device_id}/_execute_driver_command"
-            action_kwargs = {
-                "string": json.dumps(
-                    {
-                        "function_name": action_name,
-                        "function_args": action_kwargs,
-                    }
-                )
+            json_command: Dict[str, Any] = {
+                "function_name": action_name,
+                "function_args": action_kwargs,
+                JSON_UNILABOS_PARAM: {
+                    PARAM_SAMPLE_UUIDS: sample_material,
+                },
             }
+            action_kwargs = {"string": json.dumps(json_command)}
             if action_type.startswith("UniLabJsonCommandAsync"):
                 action_id = f"/devices/{device_id}/_execute_driver_command_async"
         else:
@@ -790,24 +811,9 @@ class HostNode(BaseROS2DeviceNode):
             raise ValueError(f"ActionClient {action_id} not found.")
 
         action_client: ActionClient = self._action_clients[action_id]
-
-        # 遍历action_kwargs下的所有子dict，将"sample_uuid"的值赋给"sample_id"
-        def assign_sample_id(obj):
-            if isinstance(obj, dict):
-                if "sample_uuid" in obj:
-                    obj["sample_id"] = obj["sample_uuid"]
-                    obj.pop("sample_uuid")
-                for k, v in obj.items():
-                    if k != "unilabos_extra":
-                        assign_sample_id(v)
-            elif isinstance(obj, list):
-                for item in obj:
-                    assign_sample_id(item)
-
-        assign_sample_id(action_kwargs)
         goal_msg = convert_to_ros_msg(action_client._action_type.Goal(), action_kwargs)
 
-        self.lab_logger().info(f"[Host Node] Sending goal for {action_id}: {str(goal_msg)[:1000]}")
+        # self.lab_logger().trace(f"[Host Node] Sending goal for {action_id}: {str(goal_msg)[:1000]}")
         self.lab_logger().trace(f"[Host Node] Sending goal for {action_id}: {action_kwargs}")
         self.lab_logger().trace(f"[Host Node] Sending goal for {action_id}: {goal_msg}")
         action_client.wait_for_server()
@@ -820,6 +826,51 @@ class HostNode(BaseROS2DeviceNode):
         )
         future.add_done_callback(lambda f: self.goal_response_callback(item, action_id, f))
 
+    def _build_test_mode_return(
+        self, device_id: str, action_name: str, action_kwargs: Dict[str, Any]
+    ) -> Dict[str, Any]:
+        """
+        根据注册表 handles 的 output 定义构建测试模式的模拟返回值
+
+        根据 data_key 中 @flatten 的层数决定嵌套数组层数，叶子值为空字典。
+        例如: "vessel" → {}, "plate.@flatten" → [{}], "a.@flatten.@flatten" → [[{}]]
+        """
+        mock_return: Dict[str, Any] = {"test_mode": True, "action_name": action_name}
+        action_mappings = self._action_value_mappings.get(device_id, {})
+        action_mapping = action_mappings.get(action_name, {})
+        handles = action_mapping.get("handles", {})
+        if isinstance(handles, dict):
+            for output_handle in handles.get("output", []):
+                data_key = output_handle.get("data_key", "")
+                handler_key = output_handle.get("handler_key", "")
+                # 根据 @flatten 层数构建嵌套数组，叶子为空字典
+                flatten_count = data_key.count("@flatten")
+                value: Any = {}
+                for _ in range(flatten_count):
+                    value = [value]
+                mock_return[handler_key] = value
+        return mock_return
+
+    def _handle_test_mode_result(
+        self, item: "QueueItem", action_id: str, mock_return: Dict[str, Any]
+    ) -> None:
+        """
+        测试模式下直接构建结果并走正常的结果回调流程（跳过 ROS）
+        """
+        job_id = item.job_id
+        status = "success"
+        return_info = serialize_result_info("", True, mock_return)
+
+        self.lab_logger().info(f"[TEST MODE] Result for {action_id} ({job_id[:8]}): {status}")
+
+        from unilabos.app.web.controller import store_job_result
+        store_job_result(job_id, status, return_info, mock_return)
+
+        # 发布状态到桥接器
+        for bridge in self.bridges:
+            if hasattr(bridge, "publish_job_status"):
+                bridge.publish_job_status(mock_return, item, status, return_info)
+
     def goal_response_callback(self, item: "QueueItem", action_id: str, future) -> None:
         """目标响应回调"""
         goal_handle = future.result()
@@ -867,14 +918,14 @@ class HostNode(BaseROS2DeviceNode):
                         # 适配后端的一些额外处理
                         return_value = return_info.get("return_value")
                         if isinstance(return_value, dict):
-                            unilabos_samples = return_value.pop("unilabos_samples", None)
+                            unilabos_samples = return_value.pop(RETURN_UNILABOS_SAMPLES, None)
                             if isinstance(unilabos_samples, list) and unilabos_samples:
                                 self.lab_logger().info(
                                     f"[Host Node] Job {job_id[:8]} returned {len(unilabos_samples)} sample(s): "
                                     f"{[s.get('name', s.get('id', 'unknown')) if isinstance(s, dict) else str(s)[:20] for s in unilabos_samples[:5]]}"
                                     f"{'...' if len(unilabos_samples) > 5 else ''}"
                                 )
-                                return_info["unilabos_samples"] = unilabos_samples
+                                return_info["samples"] = unilabos_samples
                         suc = return_info.get("suc", False)
                         if not suc:
                             status = "failed"
@@ -1144,7 +1195,7 @@ class HostNode(BaseROS2DeviceNode):
                 self.lab_logger().info(f"[Host Node-Resource] UUID映射: {len(uuid_mapping)} 个节点")
             # 还需要加入到资源图中，暂不实现，考虑资源图新的获取方式
             response.response = json.dumps(uuid_mapping)
-            self.lab_logger().info(f"[Host Node-Resource] Resource tree add completed, success: {success}")
+            self.lab_logger().info(f"[Host Node-Resource] Resource tree update completed, success: {success}")
 
     async def _resource_tree_update_callback(self, request: SerialCommand_Request, response: SerialCommand_Response):
         """
@@ -1179,8 +1230,12 @@ class HostNode(BaseROS2DeviceNode):
     def _node_info_update_callback(self, request, response):
         """
         更新节点信息回调
+
+        处理两种消息:
+        1. 首次上报(main_slave_run): 带 devices_config + registry_config,存储 action_value_mappings
+        2. 设备重注册(SYNC_SLAVE_NODE_INFO): 带 edge_device_id + registry_name,用 registry_name 索引已存储的 mappings
         """
-        # self.lab_logger().info(f"[Host Node] Node info update request received: {request}")
+        self.lab_logger().trace(f"[Host Node] Node info update request received: {request}")
         try:
             from unilabos.app.communication import get_communication_client
             from unilabos.app.web.client import HTTPClient, http_client
@@ -1190,12 +1245,48 @@ class HostNode(BaseROS2DeviceNode):
                 info = info["SYNC_SLAVE_NODE_INFO"]
                 machine_name = info["machine_name"]
                 edge_device_id = info["edge_device_id"]
+                registry_name = info.get("registry_name", "")
                 self.device_machine_names[edge_device_id] = machine_name
+
+                # 用 registry_name 索引已存储的 registry_config,获取 action_value_mappings
+                if registry_name and registry_name in self._slave_registry_configs:
+                    action_mappings = self._slave_registry_configs[registry_name].get(
+                        "class", {}
+                    ).get("action_value_mappings", {})
+                    if action_mappings:
+                        self._action_value_mappings[edge_device_id] = action_mappings
+                        self.lab_logger().info(
+                            f"[Host Node] Loaded {len(action_mappings)} action mappings "
+                            f"for remote device {edge_device_id} (registry: {registry_name})"
+                        )
             else:
                 devices_config = info.pop("devices_config")
                 registry_config = info.pop("registry_config")
                 if registry_config:
                     http_client.resource_registry({"resources": registry_config})
+
+                    # 存储 slave 的 registry_config,用于后续 SYNC_SLAVE_NODE_INFO 索引
+                    for reg_name, reg_data in registry_config.items():
+                        if isinstance(reg_data, dict) and "class" in reg_data:
+                            self._slave_registry_configs[reg_name] = reg_data
+
+                # 解析 devices_config,建立 device_id -> action_value_mappings 映射
+                if devices_config:
+                    for device_tree in devices_config:
+                        for device_dict in device_tree:
+                            device_id = device_dict.get("id", "")
+                            class_name = device_dict.get("class", "")
+                            if device_id and class_name and class_name in self._slave_registry_configs:
+                                action_mappings = self._slave_registry_configs[class_name].get(
+                                    "class", {}
+                                ).get("action_value_mappings", {})
+                                if action_mappings:
+                                    self._action_value_mappings[device_id] = action_mappings
+                                    self.lab_logger().info(
+                                        f"[Host Node] Stored {len(action_mappings)} action mappings "
+                                        f"for remote device {device_id} (class: {class_name})"
+                                    )
+
             self.lab_logger().debug(f"[Host Node] Node info update: {info}")
             response.response = "OK"
         except Exception as e:
@@ -1492,6 +1583,7 @@ class HostNode(BaseROS2DeviceNode):
 
     def test_resource(
         self,
+        sample_uuids: SampleUUIDsType,
         resource: ResourceSlot = None,
         resources: List[ResourceSlot] = None,
         device: DeviceSlot = None,
@@ -1506,6 +1598,7 @@ class HostNode(BaseROS2DeviceNode):
         return {
             "resources": ResourceTreeSet.from_plr_resources([resource, *resources], known_newly_created=True).dump(),
             "devices": [device, *devices],
+            "unilabos_samples": [LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for sample_uuid, content in sample_uuids.items()]
         }
 
     def handle_pong_response(self, pong_data: dict):

unilabos/ros/nodes/presets/joint_republisher.py

@@ -7,10 +7,11 @@ from rclpy.callback_groups import ReentrantCallbackGroup
 from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
 
 class JointRepublisher(BaseROS2DeviceNode):
-    def __init__(self,device_id,resource_tracker, **kwargs):
+    def __init__(self,device_id, registry_name, resource_tracker, **kwargs):
         super().__init__(
             driver_instance=self,
             device_id=device_id,
+            registry_name=registry_name,
             status_types={},
             action_value_mappings={},
             hardware_interface={},

unilabos/ros/nodes/presets/resource_mesh_manager.py

@@ -26,7 +26,7 @@ from unilabos.resources.graphio import initialize_resources
 from unilabos.registry.registry import lab_registry
 
 class ResourceMeshManager(BaseROS2DeviceNode):
-    def __init__(self, resource_model: dict, resource_config: list,resource_tracker, device_id: str = "resource_mesh_manager", rate=50, **kwargs):
+    def __init__(self, resource_model: dict, resource_config: list,resource_tracker, device_id: str = "resource_mesh_manager", registry_name: str = "", rate=50, **kwargs):
         """初始化资源网格管理器节点
         
         Args:
@@ -37,6 +37,7 @@ class ResourceMeshManager(BaseROS2DeviceNode):
         super().__init__(
             driver_instance=self,
             device_id=device_id,
+            registry_name=registry_name,
             status_types={},
             action_value_mappings={},
             hardware_interface={},

unilabos/ros/nodes/presets/serial_node.py

@@ -7,7 +7,7 @@ from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode, DeviceNodeRe
 
 
 class ROS2SerialNode(BaseROS2DeviceNode):
-    def __init__(self, device_id, port: str, baudrate: int = 9600, resource_tracker: DeviceNodeResourceTracker=None):
+    def __init__(self, device_id, registry_name, port: str, baudrate: int = 9600, resource_tracker: DeviceNodeResourceTracker=None):
         # 保存属性，以便在调用父类初始化前使用
         self.port = port
         self.baudrate = baudrate
@@ -28,6 +28,7 @@ class ROS2SerialNode(BaseROS2DeviceNode):
         BaseROS2DeviceNode.__init__(
             self,
             driver_instance=self,
+            registry_name=registry_name,
             device_id=device_id,
             status_types={},
             action_value_mappings={},

unilabos/ros/nodes/presets/workstation.py

@@ -47,6 +47,7 @@ class ROS2WorkstationNode(BaseROS2DeviceNode):
         *,
         driver_instance: "WorkstationBase",
         device_id: str,
+        registry_name: str,
         device_uuid: str,
         status_types: Dict[str, Any],
         action_value_mappings: Dict[str, Any],
@@ -62,6 +63,7 @@ class ROS2WorkstationNode(BaseROS2DeviceNode):
         super().__init__(
             driver_instance=driver_instance,
             device_id=device_id,
+            registry_name=registry_name,
             device_uuid=device_uuid,
             status_types=status_types,
             action_value_mappings={**action_value_mappings, **self.protocol_action_mappings},
@@ -340,6 +342,8 @@ class ROS2WorkstationNode(BaseROS2DeviceNode):
                             plr = self.resource_tracker.figure_resource({"name": res_name}, try_mode=False)
                             # 获取父资源
                             res = self.resource_tracker.parent_resource(plr)
+                            if res is None:
+                                res = plr
                             if id(res) not in seen:
                                 seen.add(id(res))
                                 unique_resources.append(res)

unilabos/ros/utils/driver_creator.py

@@ -52,7 +52,8 @@ class DeviceClassCreator(Generic[T]):
         if self.device_instance is not None:
             for c in self.children:
                 if c.res_content.type != "device":
-                    self.resource_tracker.add_resource(c.get_plr_nested_dict())
+                    res = ResourceTreeSet([ResourceTreeInstance(c)]).to_plr_resources()[0]
+                    self.resource_tracker.add_resource(res)
 
     def create_instance(self, data: Dict[str, Any]) -> T:
         """
@@ -119,7 +120,7 @@ class PyLabRobotCreator(DeviceClassCreator[T]):
     #     return resource, source_type
 
     def _process_resource_references(
-        self, data: Any, to_dict=False, states=None, prefix_path="", name_to_uuid=None
+        self, data: Any, processed_child_names: Optional[Dict[str, Any]], to_dict=False, states=None, prefix_path="", name_to_uuid=None
     ) -> Any:
         """
         递归处理资源引用，替换_resource_child_name对应的资源
@@ -164,6 +165,7 @@ class PyLabRobotCreator(DeviceClassCreator[T]):
                                 states[prefix_path] = resource_instance.serialize_all_state()
                                 return serialized
                             else:
+                                processed_child_names[child_name] = resource_instance
                                 self.resource_tracker.add_resource(resource_instance)
                                 # 立即设置UUID，state已经在resource_ulab_to_plr中处理过了
                                 if name_to_uuid:
@@ -182,12 +184,12 @@ class PyLabRobotCreator(DeviceClassCreator[T]):
             result = {}
             for key, value in data.items():
                 new_prefix = f"{prefix_path}.{key}" if prefix_path else key
-                result[key] = self._process_resource_references(value, to_dict, states, new_prefix, name_to_uuid)
+                result[key] = self._process_resource_references(value, processed_child_names, to_dict, states, new_prefix, name_to_uuid)
             return result
 
         elif isinstance(data, list):
             return [
-                self._process_resource_references(item, to_dict, states, f"{prefix_path}[{i}]", name_to_uuid)
+                self._process_resource_references(item, processed_child_names, to_dict, states, f"{prefix_path}[{i}]", name_to_uuid)
                 for i, item in enumerate(data)
             ]
 
@@ -234,7 +236,7 @@ class PyLabRobotCreator(DeviceClassCreator[T]):
             # 首先处理资源引用
             states = {}
             processed_data = self._process_resource_references(
-                data, to_dict=True, states=states, name_to_uuid=name_to_uuid
+                data, {}, to_dict=True, states=states, name_to_uuid=name_to_uuid
             )
 
             try:
@@ -270,7 +272,12 @@ class PyLabRobotCreator(DeviceClassCreator[T]):
                         arg_value = spec_args[param_name].annotation
                         data[param_name]["_resource_type"] = self.device_cls.__module__ + ":" + arg_value
                         logger.debug(f"自动补充 _resource_type: {data[param_name]['_resource_type']}")
-                processed_data = self._process_resource_references(data, to_dict=False, name_to_uuid=name_to_uuid)
+                processed_child_names = {}
+                processed_data = self._process_resource_references(data, processed_child_names, to_dict=False, name_to_uuid=name_to_uuid)
+                for child_name, resource_instance in processed_data.items():
+                    for ind, name in enumerate([child.res_content.name for child in self.children]):
+                        if name == child_name:
+                            self.children.pop(ind)
                 self.device_instance = super(PyLabRobotCreator, self).create_instance(processed_data)  # 补全变量后直接调用，调用的自身的attach_resource
             except Exception as e:
                 logger.error(f"PyLabRobot创建实例失败: {e}")
@@ -342,9 +349,10 @@ class WorkstationNodeCreator(DeviceClassCreator[T]):
         try:
             # 创建实例，额外补充一个给protocol node的字段，后面考虑取消
             data["children"] = self.children
-            for child in self.children:
-                if child.res_content.type != "device":
-                    self.resource_tracker.add_resource(child.get_plr_nested_dict())
+            # super(WorkstationNodeCreator, self).create_instance(data)的时候会attach
+            # for child in self.children:
+            #     if child.res_content.type != "device":
+            #         self.resource_tracker.add_resource(child.get_plr_nested_dict())
             deck_dict = data.get("deck")
             if deck_dict:
                 from pylabrobot.resources import Deck, Resource

unilabos/test/experiments/comprehensive_protocol/comprehensive_station.json

@@ -339,13 +339,8 @@
                 "z": 0
             },
             "config": {
-                "max_volume": 500.0,
                 "type": "RegularContainer",
-                "category": "container",
-                "max_temp": 200.0,
-                "min_temp": -20.0,
-                "has_stirrer": true,
-                "has_heater": true
+                "category": "container"
             },
             "data": {
                 "liquids": [],
@@ -769,9 +764,7 @@
                 "size_y": 250,
                 "size_z": 0,
                 "type": "RegularContainer",
-                "category": "container",
-                "reagent": "sodium_chloride",
-                "physical_state": "solid"
+                "category": "container"
             },
             "data": {
                 "current_mass": 500.0,
@@ -792,14 +785,11 @@
                 "z": 0
             },
             "config": {
-                "volume": 500.0,
                 "size_x": 600,
                 "size_y": 250,
                 "size_z": 0,
                 "type": "RegularContainer",
-                "category": "container",
-                "reagent": "sodium_carbonate",
-                "physical_state": "solid"
+                "category": "container"
             },
             "data": {
                 "current_mass": 500.0,
@@ -820,14 +810,11 @@
                 "z": 0
             },
             "config": {
-                "volume": 500.0,
                 "size_x": 650,
                 "size_y": 250,
                 "size_z": 0,
                 "type": "RegularContainer",
-                "category": "container",
-                "reagent": "magnesium_chloride",
-                "physical_state": "solid"
+                "category": "container"
             },
             "data": {
                 "current_mass": 500.0,

unilabos/test/experiments/prcxi_9320_slim.json

@@ -0,0 +1,446 @@
+{
+    "nodes": [
+        {
+            "id": "PRCXI",
+            "name": "PRCXI",
+            "type": "device",
+            "class": "liquid_handler.prcxi",
+            "parent": "",
+            "pose": {
+                "size": {
+                    "width": 562,
+                    "height": 394,
+                    "depth": 0
+                }
+            },
+            "config": {
+                "axis": "Left",
+                "deck": {
+                    "_resource_type": "unilabos.devices.liquid_handling.prcxi.prcxi:PRCXI9300Deck",
+                    "_resource_child_name": "PRCXI_Deck"
+                },
+                "host": "10.20.30.184",
+                "port": 9999,
+                "debug": true,
+                "setup": true,
+                "is_9320": true,
+                "timeout": 10,
+                "matrix_id": "5de524d0-3f95-406c-86dd-f83626ebc7cb",
+                "simulator": true,
+                "channel_num": 2
+            },
+            "data": {
+                "reset_ok": true
+            },
+            "schema": {},
+            "description": "",
+            "model": null,
+            "position": {
+                "x": 0,
+                "y": 240,
+                "z": 0
+            }
+        },
+        {
+            "id": "PRCXI_Deck",
+            "name": "PRCXI_Deck",
+            "children": [],
+            "parent": "PRCXI",
+            "type": "deck",
+            "class": "",
+            "position": {
+                "x": 10,
+                "y": 10,
+                "z": 0
+            },
+            "config": {
+                "type": "PRCXI9300Deck",
+                "size_x": 542,
+                "size_y": 374,
+                "size_z": 0,
+                "rotation": {
+                    "x": 0,
+                    "y": 0,
+                    "z": 0,
+                    "type": "Rotation"
+                },
+                "category": "deck",
+                "barcode": null,
+                "preferred_pickup_location": null,
+                "sites": [
+                    {
+                        "label": "T1",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 0,
+                            "y": 0,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "container",
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T2",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 138,
+                            "y": 0,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T3",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 276,
+                            "y": 0,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T4",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 414,
+                            "y": 0,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T5",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 0,
+                            "y": 96,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T6",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 138,
+                            "y": 96,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T7",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 276,
+                            "y": 96,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T8",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 414,
+                            "y": 96,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T9",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 0,
+                            "y": 192,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T10",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 138,
+                            "y": 192,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T11",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 276,
+                            "y": 192,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T12",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 414,
+                            "y": 192,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T13",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 0,
+                            "y": 288,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T14",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 138,
+                            "y": 288,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T15",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 276,
+                            "y": 288,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    },
+                    {
+                        "label": "T16",
+                        "visible": true,
+                        "occupied_by": null,
+                        "position": {
+                            "x": 414,
+                            "y": 288,
+                            "z": 0
+                        },
+                        "size": {
+                            "width": 128.0,
+                            "height": 86,
+                            "depth": 0
+                        },
+                        "content_type": [
+                            "plate",
+                            "tip_rack",
+                            "plates",
+                            "tip_racks",
+                            "tube_rack",
+                            "adaptor"
+                        ]
+                    }
+                ]
+            },
+            "data": {}
+        }
+    ],
+    "edges": []
+}

unilabos/utils/decorator.py

@@ -184,6 +184,51 @@ def get_all_subscriptions(instance) -> list:
     return subscriptions
 
 
+def always_free(func: F) -> F:
+    """
+    标记动作为永久闲置(不受busy队列限制)的装饰器
+
+    被此装饰器标记的 action 方法，在执行时不会受到设备级别的排队限制，
+    任何时候请求都可以立即执行。适用于查询类、状态读取类等轻量级操作。
+
+    Example:
+        class MyDriver:
+            @always_free
+            def query_status(self, param: str):
+                # 这个动作可以随时执行，不需要排队
+                return self._status
+
+            def transfer(self, volume: float):
+                # 这个动作会按正常排队逻辑执行
+                pass
+
+    Note:
+        - 可以与其他装饰器组合使用，@always_free 应放在最外层
+        - 仅影响 WebSocket 调度层的 busy/free 判断，不影响 ROS2 层
+    """
+
+    @wraps(func)
+    def wrapper(*args, **kwargs):
+        return func(*args, **kwargs)
+
+    wrapper._is_always_free = True  # type: ignore[attr-defined]
+
+    return wrapper  # type: ignore[return-value]
+
+
+def is_always_free(func) -> bool:
+    """
+    检查函数是否被标记为永久闲置
+
+    Args:
+        func: 被检查的函数
+
+    Returns:
+        如果函数被 @always_free 装饰则返回 True，否则返回 False
+    """
+    return getattr(func, "_is_always_free", False)
+
+
 def not_action(func: F) -> F:
     """
     标记方法为非动作的装饰器

unilabos/utils/import_manager.py

@@ -27,8 +27,9 @@ __all__ = [
 
 from ast import Constant
 
+from unilabos.resources.resource_tracker import PARAM_SAMPLE_UUIDS
 from unilabos.utils import logger
-from unilabos.utils.decorator import is_not_action
+from unilabos.utils.decorator import is_not_action, is_always_free
 
 
 class ImportManager:
@@ -281,6 +282,9 @@ class ImportManager:
                         continue
                     # 其他非_开头的方法归类为action
                     method_info = self._analyze_method_signature(method)
+                    # 检查是否被 @always_free 装饰器标记
+                    if is_always_free(method):
+                        method_info["always_free"] = True
                     result["action_methods"][name] = method_info
 
         return result
@@ -338,16 +342,24 @@ class ImportManager:
                     if self._is_not_action_method(node):
                         continue
                     # 其他非_开头的方法归类为action
+                    # 检查是否被 @always_free 装饰器标记
+                    if self._is_always_free_method(node):
+                        method_info["always_free"] = True
                     result["action_methods"][method_name] = method_info
         return result
 
-    def _analyze_method_signature(self, method) -> Dict[str, Any]:
+    def _analyze_method_signature(self, method, skip_unilabos_params: bool = True) -> Dict[str, Any]:
         """
         分析方法签名，提取具体的命名参数信息
 
         注意：此方法会跳过*args和**kwargs，只提取具体的命名参数
         这样可以确保通过**dict方式传参时的准确性
 
+        Args:
+            method: 要分析的方法
+            skip_unilabos_params: 是否跳过 unilabos 系统参数（如 sample_uuids），
+                                  registry 补全时为 True，JsonCommand 执行时为 False
+
         示例用法：
             method_info = self._analyze_method_signature(some_method)
             params = {"param1": "value1", "param2": "value2"}
@@ -368,6 +380,10 @@ class ImportManager:
             if param.kind == param.VAR_KEYWORD:  # **kwargs
                 continue
 
+            # 跳过 sample_uuids 参数（由系统自动注入，registry 补全时跳过）
+            if skip_unilabos_params and param_name == PARAM_SAMPLE_UUIDS:
+                continue
+
             is_required = param.default == inspect.Parameter.empty
             if is_required:
                 num_required += 1
@@ -464,6 +480,13 @@ class ImportManager:
                 return True
         return False
 
+    def _is_always_free_method(self, node: ast.FunctionDef) -> bool:
+        """检查是否是@always_free装饰的方法"""
+        for decorator in node.decorator_list:
+            if isinstance(decorator, ast.Name) and decorator.id == "always_free":
+                return True
+        return False
+
     def _get_property_name_from_setter(self, node: ast.FunctionDef) -> str:
         """从setter装饰器中获取属性名"""
         for decorator in node.decorator_list:
@@ -563,6 +586,9 @@ class ImportManager:
         for i, arg in enumerate(node.args.args):
             if arg.arg == "self":
                 continue
+            # 跳过 sample_uuids 参数（由系统自动注入）
+            if arg.arg == PARAM_SAMPLE_UUIDS:
+                continue
             arg_info = {
                 "name": arg.arg,
                 "type": None,

unilabos/utils/log.py

@@ -193,6 +193,7 @@ def configure_logger(loglevel=None, working_dir=None):
     root_logger.addHandler(console_handler)
 
     # 如果指定了工作目录，添加文件处理器
+    log_filepath = None
     if working_dir is not None:
         logs_dir = os.path.join(working_dir, "logs")
         os.makedirs(logs_dir, exist_ok=True)
@@ -213,6 +214,7 @@ def configure_logger(loglevel=None, working_dir=None):
 
     logging.getLogger("asyncio").setLevel(logging.INFO)
     logging.getLogger("urllib3").setLevel(logging.INFO)
+    return log_filepath
 
 
 

unilabos/workflow/common.py

@@ -19,21 +19,25 @@
 
 第一步: 按 slot 去重创建 create_resource 节点（创建板子）
 --------------------------------------------------------------------------------
+- 首先创建一个 Group 节点（type="Group", minimized=true），用于包含所有 create_resource 节点
 - 遍历所有 reagent，按 slot 去重，为每个唯一的 slot 创建一个板子
+- 所有 create_resource 节点的 parent_uuid 指向 Group 节点，minimized=true
 - 生成参数:
     res_id: plate_slot_{slot}
     device_id: /PRCXI
     class_name: PRCXI_BioER_96_wellplate
-    parent: /PRCXI/PRCXI_Deck/T{slot}
+    parent: /PRCXI/PRCXI_Deck
     slot_on_deck: "{slot}"
 - 输出端口: labware（用于连接 set_liquid_from_plate）
 - 控制流: create_resource 之间通过 ready 端口串联
 
-示例: slot=1, slot=4 -> 创建 2 个 create_resource 节点
+示例: slot=1, slot=4 -> 创建 1 个 Group + 2 个 create_resource 节点
 
 第二步: 为每个 reagent 创建 set_liquid_from_plate 节点（设置液体）
 --------------------------------------------------------------------------------
+- 首先创建一个 Group 节点（type="Group", minimized=true），用于包含所有 set_liquid_from_plate 节点
 - 遍历所有 reagent，为每个试剂创建 set_liquid_from_plate 节点
+- 所有 set_liquid_from_plate 节点的 parent_uuid 指向 Group 节点，minimized=true
 - 生成参数:
     plate: []（通过连接传递，来自 create_resource 的 labware）
     well_names: ["A1", "A3", "A5"]（来自 reagent 的 well 数组）
@@ -56,7 +60,11 @@
 ==================== 连接关系图 ====================
 
 控制流 (ready 端口串联):
-    create_resource_1 -> create_resource_2 -> ... -> set_liquid_1 -> set_liquid_2 -> ... -> transfer_liquid_1 -> transfer_liquid_2 -> ...
+    - create_resource 之间: 无 ready 连接
+    - set_liquid_from_plate 之间: 无 ready 连接
+    - create_resource 与 set_liquid_from_plate 之间: 无 ready 连接
+    - transfer_liquid 之间: 通过 ready 端口串联
+        transfer_liquid_1 -> transfer_liquid_2 -> transfer_liquid_3 -> ...
 
 物料流:
     [create_resource] --labware--> [set_liquid_from_plate] --output_wells--> [transfer_liquid] --sources_out/targets_out--> [下一个 transfer_liquid]
@@ -76,6 +84,13 @@ transfer_liquid:
     输入: sources -> sources_identifier, targets -> targets_identifier
     输出: sources -> sources_out, targets -> targets_out
 
+==================== 设备名配置 (device_name) ====================
+
+每个节点都有 device_name 字段，指定在哪个设备上执行:
+- create_resource: device_name = "host_node"（固定）
+- set_liquid_from_plate: device_name = "PRCXI"（可配置，见 DEVICE_NAME_DEFAULT）
+- transfer_liquid 等动作: device_name = "PRCXI"（可配置，见 DEVICE_NAME_DEFAULT）
+
 ==================== 校验规则 ====================
 
 - 检查 sources/targets 是否在 reagent 中定义
@@ -97,10 +112,17 @@ Json = Dict[str, Any]
 
 # ==================== 默认配置 ====================
 
+# 设备名配置
+DEVICE_NAME_HOST = "host_node"  # create_resource 固定在 host_node 上执行
+DEVICE_NAME_DEFAULT = "PRCXI"  # transfer_liquid, set_liquid_from_plate 等动作的默认设备名
+
+# 节点类型
+NODE_TYPE_DEFAULT = "ILab"  # 所有节点的默认类型
+
 # create_resource 节点默认参数
 CREATE_RESOURCE_DEFAULTS = {
     "device_id": "/PRCXI",
-    "parent_template": "/PRCXI/PRCXI_Deck/T{slot}",  # {slot} 会被替换为实际的 slot 值
+    "parent_template": "/PRCXI/PRCXI_Deck",
     "class_name": "PRCXI_BioER_96_wellplate",
 }
 
@@ -340,14 +362,16 @@ def build_protocol_graph(
     protocol_steps: List[Dict[str, Any]],
     workstation_name: str,
     action_resource_mapping: Optional[Dict[str, str]] = None,
+    labware_defs: Optional[List[Dict[str, Any]]] = None,
 ) -> WorkflowGraph:
     """统一的协议图构建函数，根据设备类型自动选择构建逻辑
 
     Args:
-        labware_info: labware 信息字典，格式为 {name: {slot, well, labware, ...}, ...}
+        labware_info: reagent 信息字典，格式为 {name: {slot, well}, ...}，用于 set_liquid 和 well 查找
         protocol_steps: 协议步骤列表
         workstation_name: 工作站名称
         action_resource_mapping: action 到 resource_name 的映射字典，可选
+        labware_defs: labware 定义列表，格式为 [{"name": "...", "slot": "1", "type": "lab_xxx"}, ...]
     """
     G = WorkflowGraph()
     resource_last_writer = {}  # reagent_name -> "node_id:port"
@@ -355,53 +379,75 @@ def build_protocol_graph(
 
     protocol_steps = refactor_data(protocol_steps, action_resource_mapping)
 
-    # ==================== 第一步：按 slot 去重创建 create_resource 节点 ====================
-    # 收集所有唯一的 slot
-    slots_info = {}  # slot -> {labware, res_id}
-    for labware_id, item in labware_info.items():
-        slot = str(item.get("slot", ""))
-        if slot and slot not in slots_info:
-            res_id = f"plate_slot_{slot}"
-            slots_info[slot] = {
-                "labware": item.get("labware", ""),
-                "res_id": res_id,
-            }
+    # ==================== 第一步：按 slot 创建 create_resource 节点 ====================
+    # 创建 Group 节点，包含所有 create_resource 节点
+    group_node_id = str(uuid.uuid4())
+    G.add_node(
+        group_node_id,
+        name="Resources Group",
+        type="Group",
+        parent_uuid="",
+        lab_node_type="Device",
+        template_name="",
+        resource_name="",
+        footer="",
+        minimized=True,
+        param=None,
+    )
 
-    # 为每个唯一的 slot 创建 create_resource 节点
+    # 直接使用 JSON 中的 labware 定义，每个 slot 一条记录，type 即 class_name
     res_index = 0
-    last_create_resource_id = None
-    for slot, info in slots_info.items():
-        node_id = str(uuid.uuid4())
-        res_id = info["res_id"]
+    for lw in (labware_defs or []):
+        slot = str(lw.get("slot", ""))
+        if not slot or slot in slot_to_create_resource:
+            continue  # 跳过空 slot 或已处理的 slot
+
+        lw_name = lw.get("name", f"slot {slot}")
+        lw_type = lw.get("type", CREATE_RESOURCE_DEFAULTS["class_name"])
+        res_id = f"plate_slot_{slot}"
 
         res_index += 1
+        node_id = str(uuid.uuid4())
         G.add_node(
             node_id,
             template_name="create_resource",
             resource_name="host_node",
-            name=f"Plate {res_index}",
-            description=f"Create plate on slot {slot}",
+            name=lw_name,
+            description=f"Create {lw_name}",
             lab_node_type="Labware",
             footer="create_resource-host_node",
+            device_name=DEVICE_NAME_HOST,
+            type=NODE_TYPE_DEFAULT,
+            parent_uuid=group_node_id,
+            minimized=True,
             param={
                 "res_id": res_id,
                 "device_id": CREATE_RESOURCE_DEFAULTS["device_id"],
-                "class_name": CREATE_RESOURCE_DEFAULTS["class_name"],
-                "parent": CREATE_RESOURCE_DEFAULTS["parent_template"].format(slot=slot),
+                "class_name": lw_type,
+                "parent": CREATE_RESOURCE_DEFAULTS["parent_template"],
                 "bind_locations": {"x": 0.0, "y": 0.0, "z": 0.0},
                 "slot_on_deck": slot,
             },
         )
         slot_to_create_resource[slot] = node_id
 
-        # create_resource 之间通过 ready 串联
-        if last_create_resource_id is not None:
-            G.add_edge(last_create_resource_id, node_id, source_port="ready", target_port="ready")
-        last_create_resource_id = node_id
-
     # ==================== 第二步：为每个 reagent 创建 set_liquid_from_plate 节点 ====================
+    # 创建 Group 节点，包含所有 set_liquid_from_plate 节点
+    set_liquid_group_id = str(uuid.uuid4())
+    G.add_node(
+        set_liquid_group_id,
+        name="SetLiquid Group",
+        type="Group",
+        parent_uuid="",
+        lab_node_type="Device",
+        template_name="",
+        resource_name="",
+        footer="",
+        minimized=True,
+        param=None,
+    )
+
     set_liquid_index = 0
-    last_set_liquid_id = last_create_resource_id  # set_liquid_from_plate 连接在 create_resource 之后
 
     for labware_id, item in labware_info.items():
         # 跳过 Tip/Rack 类型
@@ -430,6 +476,10 @@ def build_protocol_graph(
             description=f"Set liquid: {labware_id}",
             lab_node_type="Reagent",
             footer="set_liquid_from_plate-liquid_handler.prcxi",
+            device_name=DEVICE_NAME_DEFAULT,
+            type=NODE_TYPE_DEFAULT,
+            parent_uuid=set_liquid_group_id,  # 指向 Group 节点
+            minimized=True,  # 折叠显示
             param={
                 "plate": [],  # 通过连接传递
                 "well_names": wells,  # 孔位名数组，如 ["A1", "A3", "A5"]
@@ -438,10 +488,7 @@ def build_protocol_graph(
             },
         )
 
-        # ready 连接：上一个节点 -> set_liquid_from_plate
-        if last_set_liquid_id is not None:
-            G.add_edge(last_set_liquid_id, node_id, source_port="ready", target_port="ready")
-        last_set_liquid_id = node_id
+        # set_liquid_from_plate 之间不需要 ready 连接
 
         # 物料流：create_resource 的 labware -> set_liquid_from_plate 的 input_plate
         create_res_node_id = slot_to_create_resource.get(slot)
@@ -451,7 +498,8 @@ def build_protocol_graph(
         # set_liquid_from_plate 的输出 output_wells 用于连接 transfer_liquid
         resource_last_writer[labware_id] = f"{node_id}:output_wells"
 
-    last_control_node_id = last_set_liquid_id
+    # transfer_liquid 之间通过 ready 串联，从 None 开始
+    last_control_node_id = None
 
     # 端口名称映射：JSON 字段名 -> 实际 handle key
     INPUT_PORT_MAPPING = {
@@ -544,9 +592,11 @@ def build_protocol_graph(
             if param_key in params:
                 params[param_key] = []
 
-        # 更新 step 的 param 和 footer
+        # 更新 step 的 param、footer、device_name 和 type
         step_copy = step.copy()
         step_copy["param"] = params
+        step_copy["device_name"] = DEVICE_NAME_DEFAULT  # 动作节点使用默认设备名
+        step_copy["type"] = NODE_TYPE_DEFAULT  # 节点类型
 
         # 如果有警告，修改 footer 添加警告标记（警告放前面）
         if warnings:

unilabos/workflow/convert_from_json.py

@@ -1,16 +1,20 @@
 """
 JSON 工作流转换模块
 
-将 workflow/reagent 格式的 JSON 转换为统一工作流格式。
+将 workflow/reagent/labware 格式的 JSON 转换为统一工作流格式。
 
 输入格式:
 {
+    "labware": [
+        {"name": "...", "slot": "1", "type": "lab_xxx"},
+        ...
+    ],
     "workflow": [
         {"action": "...", "action_args": {...}},
         ...
     ],
     "reagent": {
-        "reagent_name": {"slot": int, "well": [...], "labware": "..."},
+        "reagent_name": {"slot": int, "well": [...]},
         ...
     }
 }
@@ -245,18 +249,18 @@ def convert_from_json(
     if "workflow" not in json_data or "reagent" not in json_data:
         raise ValueError(
             "不支持的 JSON 格式。请使用标准格式:\n"
-            '{"workflow": [{"action": "...", "action_args": {...}}, ...], '
-            '"reagent": {"name": {"slot": int, "well": [...], "labware": "..."}, ...}}'
+            '{"labware": [...], "workflow": [...], "reagent": {...}}'
         )
 
     # 提取数据
     workflow = json_data["workflow"]
     reagent = json_data["reagent"]
+    labware_defs = json_data.get("labware", [])  # 新的 labware 定义列表
 
     # 规范化步骤数据
     protocol_steps = normalize_workflow_steps(workflow)
 
-    # reagent 已经是字典格式，直接使用
+    # reagent 已经是字典格式，用于 set_liquid 和 well 数量查找
     labware_info = reagent
 
     # 构建工作流图
@@ -265,6 +269,7 @@ def convert_from_json(
         protocol_steps=protocol_steps,
         workstation_name=workstation_name,
         action_resource_mapping=ACTION_RESOURCE_MAPPING,
+        labware_defs=labware_defs,
     )
 
     # 校验句柄配置

unilabos/workflow/wf_utils.py

@@ -41,6 +41,7 @@ def upload_workflow(
     workflow_name: Optional[str] = None,
     tags: Optional[List[str]] = None,
     published: bool = False,
+    description: str = "",
 ) -> Dict[str, Any]:
     """
     上传工作流到服务器
@@ -56,6 +57,7 @@ def upload_workflow(
         workflow_name: 工作流名称，如果不提供则从文件中读取或使用文件名
         tags: 工作流标签列表，默认为空列表
         published: 是否发布工作流，默认为False
+        description: 工作流描述，发布时使用
 
     Returns:
         Dict: API响应数据
@@ -75,6 +77,14 @@ def upload_workflow(
         print_status(f"工作流文件JSON解析失败: {e}", "error")
         return {"code": -1, "message": f"JSON解析失败: {e}"}
 
+    # 从 JSON 文件中提取 description 和 tags（作为 fallback）
+    if not description and "description" in workflow_data:
+        description = workflow_data["description"]
+        print_status(f"从文件中读取 description", "info")
+    if not tags and "tags" in workflow_data:
+        tags = workflow_data["tags"]
+        print_status(f"从文件中读取 tags: {tags}", "info")
+
     # 自动检测并转换格式
     if not _is_node_link_format(workflow_data):
         try:
@@ -96,6 +106,7 @@ def upload_workflow(
     print_status(f"  - 节点数量: {len(nodes)}", "info")
     print_status(f"  - 边数量: {len(edges)}", "info")
     print_status(f"  - 标签: {tags or []}", "info")
+    print_status(f"  - 描述: {description[:50]}{'...' if len(description) > 50 else ''}", "info")
     print_status(f"  - 发布状态: {published}", "info")
 
     # 调用 http_client 上传
@@ -107,6 +118,7 @@ def upload_workflow(
         edges=edges,
         tags=tags,
         published=published,
+        description=description,
     )
 
     if result.get("code") == 0:
@@ -131,8 +143,9 @@ def handle_workflow_upload_command(args_dict: Dict[str, Any]) -> None:
     workflow_name = args_dict.get("workflow_name")
     tags = args_dict.get("tags", [])
     published = args_dict.get("published", False)
+    description = args_dict.get("description", "")
 
     if workflow_file:
-        upload_workflow(workflow_file, workflow_name, tags, published)
+        upload_workflow(workflow_file, workflow_name, tags, published, description)
     else:
         print_status("未指定工作流文件路径，请使用 -f/--workflow_file 参数", "error")

unilabos_msgs/package.xml

@@ -2,7 +2,7 @@
 <?xml-model href="http://download.ros.org/schema/package_format3.xsd" schematypens="http://www.w3.org/2001/XMLSchema"?>
 <package format="3">
   <name>unilabos_msgs</name>
-  <version>0.10.17</version>
+  <version>0.10.18</version>
   <description>ROS2 Messages package for unilabos devices</description>
   <maintainer email="changjh@pku.edu.cn">Junhan Chang</maintainer>
   <maintainer email="18435084+Xuwznln@users.noreply.github.com">Xuwznln</maintainer>