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293 lines
8.9 KiB
Markdown
293 lines
8.9 KiB
Markdown
# 资源高级参考
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本文件是 SKILL.md 的补充，包含类继承体系、序列化/反序列化、Bioyond 物料同步、非瓶类资源和仓库工厂模式。Agent 在需要实现这些功能时按需阅读。
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---
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## 1. 类继承体系
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```
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PyLabRobot
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├── Resource (PLR 基类)
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│ ├── Well
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│ │ └── Bottle (unilabos) → 瓶/小瓶/烧杯/反应器
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│ ├── Deck
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│ │ └── 自定义 Deck 类 (unilabos) → 工作站台面
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│ ├── ResourceHolder → 槽位占位符
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│ └── Container
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│ └── Battery (unilabos) → 组装好的电池
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│
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├── ItemizedCarrier (unilabos, 继承 Resource)
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│ ├── BottleCarrier (unilabos) → 瓶载架
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│ └── WareHouse (unilabos) → 堆栈仓库
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│
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├── ItemizedResource (PLR)
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│ └── MagazineHolder (unilabos) → 子弹夹载架
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│
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└── ResourceStack (PLR)
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└── Magazine (unilabos) → 子弹夹洞位
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```
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### Bottle 类细节
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```python
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class Bottle(Well):
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def __init__(self, name, diameter, height, max_volume,
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size_x=0.0, size_y=0.0, size_z=0.0,
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barcode=None, category="container", model=None, **kwargs):
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super().__init__(
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name=name,
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size_x=diameter, # PLR 用 diameter 作为 size_x/size_y
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size_y=diameter,
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size_z=height, # PLR 用 height 作为 size_z
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max_volume=max_volume,
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category=category,
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model=model,
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bottom_type="flat",
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cross_section_type="circle"
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)
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```
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注意 `size_x = size_y = diameter`，`size_z = height`。
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### ItemizedCarrier 核心方法
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| 方法 | 说明 |
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|------|------|
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| `__getitem__(identifier)` | 通过索引或 Excel 标识（如 `"A01"`）访问槽位 |
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| `__setitem__(identifier, resource)` | 向槽位放入资源 |
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| `get_child_identifier(child)` | 获取子资源的标识符 |
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| `capacity` | 总槽位数 |
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| `sites` | 所有槽位字典 |
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---
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## 2. 序列化与反序列化
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### PLR ↔ UniLab 转换
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| 函数 | 位置 | 方向 |
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|------|------|------|
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| `ResourceTreeSet.from_plr_resources(resources)` | `resource_tracker.py` | PLR → UniLab |
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| `ResourceTreeSet.to_plr_resources()` | `resource_tracker.py` | UniLab → PLR |
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### `from_plr_resources` 流程
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```
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PLR Resource
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↓ build_uuid_mapping (递归生成 UUID)
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↓ resource.serialize() → dict
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↓ resource.serialize_all_state() → states
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↓ resource_plr_inner (递归构建 ResourceDictInstance)
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ResourceTreeSet
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```
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关键：每个 PLR 资源通过 `unilabos_uuid` 属性携带 UUID，`unilabos_extra` 携带扩展数据（如 `class` 名）。
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### `to_plr_resources` 流程
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```
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ResourceTreeSet
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↓ collect_node_data (收集 UUID、状态、扩展数据)
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↓ node_to_plr_dict (转为 PLR 字典格式)
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↓ find_subclass(type_name, PLRResource) (查找 PLR 子类)
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↓ sub_cls.deserialize(plr_dict) (反序列化)
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↓ loop_set_uuid, loop_set_extra (递归设置 UUID 和扩展)
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PLR Resource
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```
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### Bottle 序列化
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```python
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class Bottle(Well):
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def serialize(self) -> dict:
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data = super().serialize()
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return {**data, "diameter": self.diameter, "height": self.height}
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@classmethod
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def deserialize(cls, data: dict, allow_marshal=False):
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barcode_data = data.pop("barcode", None)
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instance = super().deserialize(data, allow_marshal=allow_marshal)
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if barcode_data and isinstance(barcode_data, str):
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instance.barcode = barcode_data
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return instance
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```
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---
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## 3. Bioyond 物料同步
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### 双向转换函数
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| 函数 | 位置 | 方向 |
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|------|------|------|
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| `resource_bioyond_to_plr(materials, type_mapping, deck)` | `graphio.py` | Bioyond → PLR |
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| `resource_plr_to_bioyond(resources, type_mapping, warehouse_mapping)` | `graphio.py` | PLR → Bioyond |
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### `resource_bioyond_to_plr` 流程
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```
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Bioyond 物料列表
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↓ reverse_type_mapping: {typeName → (model, UUID)}
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↓ 对每个物料:
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typeName → 查映射 → model (如 "BIOYOND_PolymerStation_Reactor")
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initialize_resource({"name": unique_name, "class": model})
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↓ 设置 unilabos_extra (material_bioyond_id, material_bioyond_name 等)
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↓ 处理 detail (子物料/坐标)
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↓ 按 locationName 放入 deck.warehouses 对应槽位
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PLR 资源列表
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```
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### `resource_plr_to_bioyond` 流程
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```
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PLR 资源列表
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↓ 遍历每个资源:
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载架(capacity > 1): 生成 details 子物料 + 坐标
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单瓶: 直接映射
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↓ type_mapping 查找 typeId
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↓ warehouse_mapping 查找位置 UUID
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↓ 组装 Bioyond 格式 (name, typeName, typeId, quantity, Parameters, locations)
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Bioyond 物料列表
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```
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### BioyondResourceSynchronizer
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工作站通过 `ResourceSynchronizer` 自动同步物料：
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```python
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class BioyondResourceSynchronizer(ResourceSynchronizer):
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def sync_from_external(self) -> bool:
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all_data = []
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all_data.extend(api_client.stock_material('{"typeMode": 0}')) # 耗材
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all_data.extend(api_client.stock_material('{"typeMode": 1}')) # 样品
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all_data.extend(api_client.stock_material('{"typeMode": 2}')) # 试剂
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unilab_resources = resource_bioyond_to_plr(
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all_data,
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type_mapping=self.workstation.bioyond_config["material_type_mappings"],
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deck=self.workstation.deck
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)
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# 更新 deck 上的资源
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```
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---
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## 4. 非瓶类资源
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### ElectrodeSheet（极片）
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路径：`unilabos/resources/battery/electrode_sheet.py`
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```python
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class ElectrodeSheet(ResourcePLR):
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"""片状材料（极片、隔膜、弹片、垫片等）"""
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_unilabos_state = {
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"diameter": 0.0,
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"thickness": 0.0,
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"mass": 0.0,
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"material_type": "",
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"color": "",
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"info": "",
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}
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```
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工厂函数：`PositiveCan`, `PositiveElectrode`, `NegativeCan`, `NegativeElectrode`, `SpringWasher`, `FlatWasher`, `AluminumFoil`
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### Battery（电池）
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```python
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class Battery(Container):
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"""组装好的电池"""
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_unilabos_state = {
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"color": "",
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"electrolyte_name": "",
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"open_circuit_voltage": 0.0,
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}
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```
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### Magazine / MagazineHolder（子弹夹）
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```python
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class Magazine(ResourceStack):
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"""子弹夹洞位，可堆叠 ElectrodeSheet"""
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# direction, max_sheets
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class MagazineHolder(ItemizedResource):
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"""多洞位子弹夹"""
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# hole_diameter, hole_depth, max_sheets_per_hole
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```
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工厂函数 `magazine_factory()` 用 `create_homogeneous_resources` 生成洞位，可选预填 `ElectrodeSheet` 或 `Battery`。
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---
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## 5. 仓库工厂模式参考
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### 实际 warehouse 工厂函数示例
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```python
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# 行优先 4x4 仓库
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def bioyond_warehouse_1x4x4(name: str) -> WareHouse:
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return warehouse_factory(
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name=name,
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num_items_x=4, num_items_y=4, num_items_z=1,
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dx=10.0, dy=10.0, dz=10.0,
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item_dx=147.0, item_dy=106.0, item_dz=130.0,
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layout="row-major", # A01,A02,A03,A04, B01,...
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)
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# 右侧 4x4 仓库（列名偏移）
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def bioyond_warehouse_1x4x4_right(name: str) -> WareHouse:
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return warehouse_factory(
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name=name,
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num_items_x=4, num_items_y=4, num_items_z=1,
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dx=10.0, dy=10.0, dz=10.0,
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item_dx=147.0, item_dy=106.0, item_dz=130.0,
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col_offset=4, # A05,A06,A07,A08
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layout="row-major",
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)
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# 竖向仓库（站内试剂存放）
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def bioyond_warehouse_reagent_storage(name: str) -> WareHouse:
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return warehouse_factory(
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name=name,
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num_items_x=1, num_items_y=2, num_items_z=1,
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dx=10.0, dy=10.0, dz=10.0,
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item_dx=147.0, item_dy=106.0, item_dz=130.0,
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layout="vertical-col-major",
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)
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# 行偏移（F 行开始）
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def bioyond_warehouse_5x3x1(name: str, row_offset: int = 0) -> WareHouse:
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return warehouse_factory(
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name=name,
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num_items_x=3, num_items_y=5, num_items_z=1,
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dx=10.0, dy=10.0, dz=10.0,
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item_dx=159.0, item_dy=183.0, item_dz=130.0,
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row_offset=row_offset, # 0→A行起，5→F行起
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layout="row-major",
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)
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```
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### layout 类型说明
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| layout | 命名顺序 | 适用场景 |
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|--------|---------|---------|
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| `col-major` (默认) | A01,B01,C01,D01, A02,B02,... | 列优先，标准堆栈 |
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| `row-major` | A01,A02,A03,A04, B01,B02,... | 行优先，Bioyond 前端展示 |
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| `vertical-col-major` | 竖向排列，标签从底部开始 | 竖向仓库（试剂存放、测密度） |
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---
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## 6. 关键路径
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| 内容 | 路径 |
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|------|------|
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| Bottle/Carrier 基类 | `unilabos/resources/itemized_carrier.py` |
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| WareHouse 类 + 工厂 | `unilabos/resources/warehouse.py` |
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| ResourceTreeSet 转换 | `unilabos/resources/resource_tracker.py` |
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| Bioyond 物料转换 | `unilabos/resources/graphio.py` |
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| Bioyond 仓库定义 | `unilabos/resources/bioyond/warehouses.py` |
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| 电池资源 | `unilabos/resources/battery/` |
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| PLR 注册 | `unilabos/resources/plr_additional_res_reg.py` |
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