Merge remote-tracking branch 'origin/dev' into feature/organic-extraction

add open_timeout parameter to websocket connection
add TimeoutError and InvalidStatus exception handling
implement exponential backoff for reconnection attempts
simplify reconnection logic flow

.conda/base/recipe.yaml

@@ -3,7 +3,7 @@
 
 package:
   name: unilabos
-  version: 0.10.17
+  version: 0.10.18
 
 source:
   path: ../../unilabos
@@ -46,13 +46,15 @@ requirements:
   - jinja2
   - requests
   - uvicorn
-  - opcua # [not osx]
+  - if: not osx
+    then:
+    - opcua
   - pyserial
   - pandas
   - pymodbus
   - matplotlib
   - pylibftdi
-  - uni-lab::unilabos-env ==0.10.17
+  - uni-lab::unilabos-env ==0.10.18
 
 about:
   repository: https://github.com/deepmodeling/Uni-Lab-OS

.conda/environment/recipe.yaml

@@ -2,7 +2,7 @@
 
 package:
   name: unilabos-env
-  version: 0.10.17
+  version: 0.10.18
 
 build:
   noarch: generic

.conda/full/recipe.yaml

@@ -3,7 +3,7 @@
 
 package:
   name: unilabos-full
-  version: 0.10.17
+  version: 0.10.18
 
 build:
   noarch: generic
@@ -11,7 +11,7 @@ build:
 requirements:
   run:
   # Base unilabos package (includes unilabos-env)
-  - uni-lab::unilabos ==0.10.17
+  - uni-lab::unilabos ==0.10.18
   # Documentation tools
   - sphinx
   - sphinx_rtd_theme

.cursor/rules/device-drivers.mdc

@@ -0,0 +1,328 @@
+---
+description: 设备驱动开发规范
+globs: ["unilabos/devices/**/*.py"]
+---
+
+# 设备驱动开发规范
+
+## 目录结构
+
+```
+unilabos/devices/
+├── virtual/           # 虚拟设备（用于测试）
+│   ├── virtual_stirrer.py
+│   └── virtual_centrifuge.py
+├── liquid_handling/   # 液体处理设备
+├── balance/           # 天平设备
+├── hplc/              # HPLC设备
+├── pump_and_valve/    # 泵和阀门
+├── temperature/       # 温度控制设备
+├── workstation/       # 工作站（组合设备）
+└── ...
+```
+
+## 设备类完整模板
+
+```python
+import asyncio
+import logging
+import time as time_module
+from typing import Dict, Any, Optional
+
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+
+
+class MyDevice:
+    """
+    设备类描述
+
+    Attributes:
+        device_id: 设备唯一标识
+        config: 设备配置字典
+        data: 设备状态数据
+    """
+
+    _ros_node: BaseROS2DeviceNode
+
+    def __init__(
+        self,
+        device_id: str = None,
+        config: Dict[str, Any] = None,
+        **kwargs
+    ):
+        """
+        初始化设备
+
+        Args:
+            device_id: 设备ID
+            config: 配置字典
+            **kwargs: 其他参数
+        """
+        # 兼容不同调用方式
+        if device_id is None and 'id' in kwargs:
+            device_id = kwargs.pop('id')
+        if config is None and 'config' in kwargs:
+            config = kwargs.pop('config')
+
+        self.device_id = device_id or "unknown_device"
+        self.config = config or {}
+        self.data = {}
+
+        # 从config读取参数
+        self.port = self.config.get('port') or kwargs.get('port', 'COM1')
+        self._max_value = self.config.get('max_value', 1000.0)
+
+        # 初始化日志
+        self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
+
+        self.logger.info(f"设备 {self.device_id} 已创建")
+
+    def post_init(self, ros_node: BaseROS2DeviceNode):
+        """
+        ROS节点注入 - 在ROS节点创建后调用
+
+        Args:
+            ros_node: ROS2设备节点实例
+        """
+        self._ros_node = ros_node
+
+    async def initialize(self) -> bool:
+        """
+        初始化设备 - 连接硬件、设置初始状态
+
+        Returns:
+            bool: 初始化是否成功
+        """
+        self.logger.info(f"初始化设备 {self.device_id}")
+
+        try:
+            # 执行硬件初始化
+            # await self._connect_hardware()
+
+            # 设置初始状态
+            self.data.update({
+                "status": "待机",
+                "is_running": False,
+                "current_value": 0.0,
+            })
+
+            self.logger.info(f"设备 {self.device_id} 初始化完成")
+            return True
+
+        except Exception as e:
+            self.logger.error(f"初始化失败: {e}")
+            self.data["status"] = f"错误: {e}"
+            return False
+
+    async def cleanup(self) -> bool:
+        """
+        清理设备 - 断开连接、释放资源
+
+        Returns:
+            bool: 清理是否成功
+        """
+        self.logger.info(f"清理设备 {self.device_id}")
+
+        self.data.update({
+            "status": "离线",
+            "is_running": False,
+        })
+
+        return True
+
+    # ==================== 设备动作 ====================
+
+    async def execute_action(
+        self,
+        param1: float,
+        param2: str = "",
+        **kwargs
+    ) -> bool:
+        """
+        执行设备动作
+
+        Args:
+            param1: 参数1
+            param2: 参数2（可选）
+
+        Returns:
+            bool: 动作是否成功
+        """
+        # 类型转换和验证
+        try:
+            param1 = float(param1)
+        except (ValueError, TypeError) as e:
+            self.logger.error(f"参数类型错误: {e}")
+            return False
+
+        # 参数验证
+        if param1 > self._max_value:
+            self.logger.error(f"参数超出范围: {param1} > {self._max_value}")
+            return False
+
+        self.logger.info(f"执行动作: param1={param1}, param2={param2}")
+
+        # 更新状态
+        self.data.update({
+            "status": "运行中",
+            "is_running": True,
+        })
+
+        # 执行动作（带进度反馈）
+        duration = 10.0  # 秒
+        start_time = time_module.time()
+
+        while True:
+            elapsed = time_module.time() - start_time
+            remaining = max(0, duration - elapsed)
+            progress = min(100, (elapsed / duration) * 100)
+
+            self.data.update({
+                "status": f"运行中: {progress:.0f}%",
+                "remaining_time": remaining,
+            })
+
+            if remaining <= 0:
+                break
+
+            await self._ros_node.sleep(1.0)
+
+        # 完成
+        self.data.update({
+            "status": "完成",
+            "is_running": False,
+        })
+
+        self.logger.info("动作执行完成")
+        return True
+
+    # ==================== 状态属性 ====================
+
+    @property
+    def status(self) -> str:
+        """设备状态 - 自动发布为ROS Topic"""
+        return self.data.get("status", "未知")
+
+    @property
+    def is_running(self) -> bool:
+        """是否正在运行"""
+        return self.data.get("is_running", False)
+
+    @property
+    def current_value(self) -> float:
+        """当前值"""
+        return self.data.get("current_value", 0.0)
+
+    # ==================== 辅助方法 ====================
+
+    def get_device_info(self) -> Dict[str, Any]:
+        """获取设备信息"""
+        return {
+            "device_id": self.device_id,
+            "status": self.status,
+            "is_running": self.is_running,
+            "current_value": self.current_value,
+        }
+
+    def __str__(self) -> str:
+        return f"MyDevice({self.device_id}: {self.status})"
+```
+
+## 关键规则
+
+### 1. 参数处理
+
+所有动作方法的参数都可能以字符串形式传入，必须进行类型转换：
+
+```python
+async def my_action(self, value: float, **kwargs) -> bool:
+    # 始终进行类型转换
+    try:
+        value = float(value)
+    except (ValueError, TypeError) as e:
+        self.logger.error(f"参数类型错误: {e}")
+        return False
+```
+
+### 2. vessel 参数处理
+
+vessel 参数可能是字符串ID或字典：
+
+```python
+def extract_vessel_id(vessel: Union[str, dict]) -> str:
+    if isinstance(vessel, dict):
+        return vessel.get("id", "")
+    return str(vessel) if vessel else ""
+```
+
+### 3. 状态更新
+
+使用 `self.data` 字典存储状态，属性读取状态：
+
+```python
+# 更新状态
+self.data["status"] = "运行中"
+self.data["current_speed"] = 300.0
+
+# 读取状态（通过属性）
+@property
+def status(self) -> str:
+    return self.data.get("status", "待机")
+```
+
+### 4. 异步等待
+
+使用 ROS 节点的 sleep 方法：
+
+```python
+# 正确
+await self._ros_node.sleep(1.0)
+
+# 避免（除非在纯 Python 测试环境）
+await asyncio.sleep(1.0)
+```
+
+### 5. 进度反馈
+
+长时间运行的操作需要提供进度反馈：
+
+```python
+while remaining > 0:
+    progress = (elapsed / total_time) * 100
+    self.data["status"] = f"运行中: {progress:.0f}%"
+    self.data["remaining_time"] = remaining
+
+    await self._ros_node.sleep(1.0)
+```
+
+## 虚拟设备
+
+虚拟设备用于测试和演示，放在 `unilabos/devices/virtual/` 目录：
+
+- 类名以 `Virtual` 开头
+- 文件名以 `virtual_` 开头
+- 模拟真实设备的行为和时序
+- 使用表情符号增强日志可读性（可选）
+
+## 工作站设备
+
+工作站是组合多个设备的复杂设备：
+
+```python
+from unilabos.devices.workstation.workstation_base import WorkstationBase
+
+class MyWorkstation(WorkstationBase):
+    """组合工作站"""
+
+    async def execute_workflow(self, workflow: Dict[str, Any]) -> bool:
+        """执行工作流"""
+        pass
+```
+
+## 设备注册
+
+设备类开发完成后，需要在注册表中注册：
+
+1. 创建/编辑 `unilabos/registry/devices/my_category.yaml`
+2. 添加设备配置（参考 `virtual_device.yaml`）
+3. 运行 `--complete_registry` 自动生成 schema

.cursor/rules/protocol-development.mdc

@@ -0,0 +1,240 @@
+---
+description: 协议编译器开发规范
+globs: ["unilabos/compile/**/*.py"]
+---
+
+# 协议编译器开发规范
+
+## 概述
+
+协议编译器负责将高级实验操作（如 Stir、Add、Filter）编译为设备可执行的动作序列。
+
+## 文件命名
+
+- 位置: `unilabos/compile/`
+- 命名: `{operation}_protocol.py`
+- 示例: `stir_protocol.py`, `add_protocol.py`, `filter_protocol.py`
+
+## 协议函数模板
+
+```python
+from typing import List, Dict, Any, Union
+import networkx as nx
+import logging
+
+from .utils.unit_parser import parse_time_input
+from .utils.vessel_parser import extract_vessel_id
+
+logger = logging.getLogger(__name__)
+
+
+def generate_{operation}_protocol(
+    G: nx.DiGraph,
+    vessel: Union[str, dict],
+    param1: Union[str, float] = "0",
+    param2: float = 0.0,
+    **kwargs
+) -> List[Dict[str, Any]]:
+    """
+    生成{操作}协议序列
+
+    Args:
+        G: 物理拓扑图 (NetworkX DiGraph)
+        vessel: 容器ID或Resource字典
+        param1: 参数1（支持字符串单位，如 "5 min"）
+        param2: 参数2
+        **kwargs: 其他参数
+
+    Returns:
+        List[Dict]: 动作序列
+
+    Raises:
+        ValueError: 参数无效时
+    """
+    # 1. 提取 vessel_id
+    vessel_id = extract_vessel_id(vessel)
+
+    # 2. 验证参数
+    if not vessel_id:
+        raise ValueError("vessel 参数不能为空")
+
+    if vessel_id not in G.nodes():
+        raise ValueError(f"容器 '{vessel_id}' 不存在于系统中")
+
+    # 3. 解析参数（支持单位）
+    parsed_param1 = parse_time_input(param1)  # "5 min" -> 300.0
+
+    # 4. 查找设备
+    device_id = find_connected_device(G, vessel_id, device_type="my_device")
+
+    # 5. 生成动作序列
+    action_sequence = []
+
+    action = {
+        "device_id": device_id,
+        "action_name": "my_action",
+        "action_kwargs": {
+            "vessel": {"id": vessel_id},  # 始终使用字典格式
+            "param1": float(parsed_param1),
+            "param2": float(param2),
+        }
+    }
+    action_sequence.append(action)
+
+    logger.info(f"生成协议: {len(action_sequence)} 个动作")
+    return action_sequence
+
+
+def find_connected_device(
+    G: nx.DiGraph,
+    vessel_id: str,
+    device_type: str = ""
+) -> str:
+    """
+    查找与容器相连的设备
+
+    Args:
+        G: 拓扑图
+        vessel_id: 容器ID
+        device_type: 设备类型关键字
+
+    Returns:
+        str: 设备ID
+    """
+    # 查找所有匹配类型的设备
+    device_nodes = []
+    for node in G.nodes():
+        node_class = G.nodes[node].get('class', '') or ''
+        if device_type.lower() in node_class.lower():
+            device_nodes.append(node)
+
+    # 检查连接
+    if vessel_id and device_nodes:
+        for device in device_nodes:
+            if G.has_edge(device, vessel_id) or G.has_edge(vessel_id, device):
+                return device
+
+    # 返回第一个可用设备
+    if device_nodes:
+        return device_nodes[0]
+
+    # 默认设备
+    return f"{device_type}_1"
+```
+
+## 关键规则
+
+### 1. vessel 参数处理
+
+vessel 参数可能是字符串或字典，需要统一处理：
+
+```python
+def extract_vessel_id(vessel: Union[str, dict]) -> str:
+    """提取vessel_id"""
+    if isinstance(vessel, dict):
+        # 可能是 {"id": "xxx"} 或完整 Resource 对象
+        return vessel.get("id", list(vessel.values())[0].get("id", ""))
+    return str(vessel) if vessel else ""
+```
+
+### 2. action_kwargs 中的 vessel
+
+始终使用 `{"id": vessel_id}` 格式传递 vessel：
+
+```python
+# 正确
+"action_kwargs": {
+    "vessel": {"id": vessel_id},  # 字符串ID包装为字典
+}
+
+# 避免
+"action_kwargs": {
+    "vessel": vessel_resource,  # 不要传递完整 Resource 对象
+}
+```
+
+### 3. 单位解析
+
+使用 `parse_time_input` 解析时间参数：
+
+```python
+from .utils.unit_parser import parse_time_input
+
+# 支持格式: "5 min", "1 h", "300", "1.5 hours"
+time_seconds = parse_time_input("5 min")  # -> 300.0
+time_seconds = parse_time_input(120)      # -> 120.0
+time_seconds = parse_time_input("1 h")    # -> 3600.0
+```
+
+### 4. 参数验证
+
+所有参数必须进行验证和类型转换：
+
+```python
+# 验证范围
+if speed < 10.0 or speed > 1500.0:
+    logger.warning(f"速度 {speed} 超出范围，修正为 300")
+    speed = 300.0
+
+# 类型转换
+param = float(param) if not isinstance(param, (int, float)) else param
+```
+
+### 5. 日志记录
+
+使用项目日志记录器：
+
+```python
+logger = logging.getLogger(__name__)
+
+def generate_protocol(...):
+    logger.info(f"开始生成协议...")
+    logger.debug(f"参数: vessel={vessel_id}, time={time}")
+    logger.warning(f"参数修正: {old_value} -> {new_value}")
+```
+
+## 便捷函数
+
+为常用操作提供便捷函数：
+
+```python
+def stir_briefly(G: nx.DiGraph, vessel: Union[str, dict],
+                speed: float = 300.0) -> List[Dict[str, Any]]:
+    """短时间搅拌（30秒）"""
+    return generate_stir_protocol(G, vessel, time="30", stir_speed=speed)
+
+def stir_vigorously(G: nx.DiGraph, vessel: Union[str, dict],
+                   time: str = "5 min") -> List[Dict[str, Any]]:
+    """剧烈搅拌"""
+    return generate_stir_protocol(G, vessel, time=time, stir_speed=800.0)
+```
+
+## 测试函数
+
+每个协议文件应包含测试函数：
+
+```python
+def test_{operation}_protocol():
+    """测试协议生成"""
+    # 测试参数处理
+    vessel_dict = {"id": "flask_1", "name": "反应瓶1"}
+    vessel_id = extract_vessel_id(vessel_dict)
+    assert vessel_id == "flask_1"
+
+    # 测试单位解析
+    time_s = parse_time_input("5 min")
+    assert time_s == 300.0
+
+
+if __name__ == "__main__":
+    test_{operation}_protocol()
+```
+
+## 现有协议参考
+
+- `stir_protocol.py` - 搅拌操作
+- `add_protocol.py` - 添加物料
+- `filter_protocol.py` - 过滤操作
+- `heatchill_protocol.py` - 加热/冷却
+- `separate_protocol.py` - 分离操作
+- `evaporate_protocol.py` - 蒸发操作

.cursor/rules/registry-config.mdc

@@ -0,0 +1,319 @@
+---
+description: 注册表配置规范 (YAML)
+globs: ["unilabos/registry/**/*.yaml"]
+---
+
+# 注册表配置规范
+
+## 概述
+
+注册表使用 YAML 格式定义设备和资源类型，是 Uni-Lab-OS 的核心配置系统。
+
+## 目录结构
+
+```
+unilabos/registry/
+├── devices/              # 设备类型注册
+│   ├── virtual_device.yaml
+│   ├── liquid_handler.yaml
+│   └── ...
+├── device_comms/         # 通信设备配置
+│   ├── communication_devices.yaml
+│   └── modbus_ioboard.yaml
+└── resources/            # 资源类型注册
+    ├── bioyond/
+    ├── organic/
+    ├── opentrons/
+    └── ...
+```
+
+## 设备注册表格式
+
+### 基本结构
+
+```yaml
+device_type_id:
+  # 基本信息
+  description: "设备描述"
+  version: "1.0.0"
+  category:
+    - category_name
+  icon: "icon_device.webp"
+
+  # 类配置
+  class:
+    module: "unilabos.devices.my_module:MyClass"
+    type: python
+
+    # 状态类型（属性 -> ROS消息类型）
+    status_types:
+      status: String
+      temperature: Float64
+      is_running: Bool
+
+    # 动作映射
+    action_value_mappings:
+      action_name:
+        type: UniLabJsonCommand  # 或 UniLabJsonCommandAsync
+        goal: {}
+        feedback: {}
+        result: {}
+        schema: {...}
+        handles: {}
+```
+
+### action_value_mappings 详细格式
+
+```yaml
+action_value_mappings:
+  # 同步动作
+  my_sync_action:
+    type: UniLabJsonCommand
+    goal:
+      param1: param1
+      param2: param2
+    feedback: {}
+    result:
+      success: success
+      message: message
+    goal_default:
+      param1: 0.0
+      param2: ""
+    handles: {}
+    placeholder_keys:
+      device_param: unilabos_devices   # 设备选择器
+      resource_param: unilabos_resources  # 资源选择器
+    schema:
+      title: "动作名称参数"
+      description: "动作描述"
+      type: object
+      properties:
+        goal:
+          type: object
+          properties:
+            param1:
+              type: number
+            param2:
+              type: string
+          required:
+            - param1
+        feedback: {}
+        result:
+          type: object
+          properties:
+            success:
+              type: boolean
+            message:
+              type: string
+      required:
+        - goal
+
+  # 异步动作
+  my_async_action:
+    type: UniLabJsonCommandAsync
+    goal: {}
+    feedback:
+      progress: progress
+      current_status: status
+    result:
+      success: success
+    schema: {...}
+```
+
+### 自动生成的动作
+
+以 `auto-` 开头的动作由系统自动生成：
+
+```yaml
+action_value_mappings:
+  auto-initialize:
+    type: UniLabJsonCommandAsync
+    goal: {}
+    feedback: {}
+    result: {}
+    schema: {...}
+
+  auto-cleanup:
+    type: UniLabJsonCommandAsync
+    goal: {}
+    feedback: {}
+    result: {}
+    schema: {...}
+```
+
+### handles 配置
+
+用于工作流编辑器中的数据流连接：
+
+```yaml
+handles:
+  input:
+    - handler_key: "input_resource"
+      data_type: "resource"
+      label: "输入资源"
+      data_source: "handle"
+      data_key: "resources"
+  output:
+    - handler_key: "output_labware"
+      data_type: "resource"
+      label: "输出器皿"
+      data_source: "executor"
+      data_key: "created_resource.@flatten"
+```
+
+## 资源注册表格式
+
+```yaml
+resource_type_id:
+  description: "资源描述"
+  version: "1.0.0"
+  category:
+    - category_name
+  icon: ""
+  handles: []
+  init_param_schema: {}
+
+  class:
+    module: "unilabos.resources.my_module:MyResource"
+    type: pylabrobot  # 或 python
+```
+
+### PyLabRobot 资源示例
+
+```yaml
+BIOYOND_Electrolyte_6VialCarrier:
+  category:
+    - bottle_carriers
+    - bioyond
+  class:
+    module: "unilabos.resources.bioyond.bottle_carriers:BIOYOND_Electrolyte_6VialCarrier"
+    type: pylabrobot
+  version: "1.0.0"
+```
+
+## 状态类型映射
+
+Python 类型到 ROS 消息类型的映射：
+
+| Python 类型 | ROS 消息类型 |
+|------------|-------------|
+| `str` | `String` |
+| `bool` | `Bool` |
+| `int` | `Int64` |
+| `float` | `Float64` |
+| `list` | `String` (序列化) |
+| `dict` | `String` (序列化) |
+
+## 自动完善注册表
+
+使用 `--complete_registry` 参数自动生成 schema：
+
+```bash
+python -m unilabos.app.main --complete_registry
+```
+
+这会：
+1. 扫描设备类的方法签名
+2. 自动生成 `auto-` 前缀的动作
+3. 生成 JSON Schema
+4. 更新 YAML 文件
+
+## 验证规则
+
+1. **device_type_id** 必须唯一
+2. **module** 路径必须正确可导入
+3. **status_types** 的类型必须是有效的 ROS 消息类型
+4. **schema** 必须是有效的 JSON Schema
+
+## 示例：完整设备配置
+
+```yaml
+virtual_stirrer:
+  category:
+    - virtual_device
+  description: "虚拟搅拌器设备"
+  version: "1.0.0"
+  icon: "icon_stirrer.webp"
+  handles: []
+  init_param_schema: {}
+
+  class:
+    module: "unilabos.devices.virtual.virtual_stirrer:VirtualStirrer"
+    type: python
+
+    status_types:
+      status: String
+      operation_mode: String
+      current_speed: Float64
+      is_stirring: Bool
+      remaining_time: Float64
+
+    action_value_mappings:
+      auto-initialize:
+        type: UniLabJsonCommandAsync
+        goal: {}
+        feedback: {}
+        result: {}
+        schema:
+          title: "initialize参数"
+          type: object
+          properties:
+            goal:
+              type: object
+              properties: {}
+            feedback: {}
+            result: {}
+          required:
+            - goal
+
+      stir:
+        type: UniLabJsonCommandAsync
+        goal:
+          stir_time: stir_time
+          stir_speed: stir_speed
+          settling_time: settling_time
+        feedback:
+          current_speed: current_speed
+          remaining_time: remaining_time
+        result:
+          success: success
+        goal_default:
+          stir_time: 60.0
+          stir_speed: 300.0
+          settling_time: 30.0
+        handles: {}
+        schema:
+          title: "stir参数"
+          description: "搅拌操作"
+          type: object
+          properties:
+            goal:
+              type: object
+              properties:
+                stir_time:
+                  type: number
+                  description: "搅拌时间（秒）"
+                stir_speed:
+                  type: number
+                  description: "搅拌速度（RPM）"
+                settling_time:
+                  type: number
+                  description: "沉降时间（秒）"
+              required:
+                - stir_time
+                - stir_speed
+            feedback:
+              type: object
+              properties:
+                current_speed:
+                  type: number
+                remaining_time:
+                  type: number
+            result:
+              type: object
+              properties:
+                success:
+                  type: boolean
+          required:
+            - goal
+```

.cursor/rules/ros-integration.mdc

@@ -0,0 +1,233 @@
+---
+description: ROS 2 集成开发规范
+globs: ["unilabos/ros/**/*.py", "**/*_node.py"]
+---
+
+# ROS 2 集成开发规范
+
+## 概述
+
+Uni-Lab-OS 使用 ROS 2 作为设备通信中间件，基于 rclpy 实现。
+
+## 核心组件
+
+### BaseROS2DeviceNode
+
+设备节点基类，提供：
+- ROS Topic 自动发布（状态属性）
+- Action Server 自动创建（设备动作）
+- 资源管理服务
+- 异步任务调度
+
+```python
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+```
+
+### 消息转换器
+
+```python
+from unilabos.ros.msgs.message_converter import (
+    convert_to_ros_msg,
+    convert_from_ros_msg_with_mapping,
+    msg_converter_manager,
+    ros_action_to_json_schema,
+    ros_message_to_json_schema,
+)
+```
+
+## 设备与 ROS 集成
+
+### post_init 方法
+
+设备类必须实现 `post_init` 方法接收 ROS 节点：
+
+```python
+class MyDevice:
+    _ros_node: BaseROS2DeviceNode
+
+    def post_init(self, ros_node: BaseROS2DeviceNode):
+        """ROS节点注入"""
+        self._ros_node = ros_node
+```
+
+### 状态属性发布
+
+设备的 `@property` 属性会自动发布为 ROS Topic：
+
+```python
+class MyDevice:
+    @property
+    def temperature(self) -> float:
+        return self._temperature
+
+    # 自动发布到 /{namespace}/temperature Topic
+```
+
+### Topic 配置装饰器
+
+```python
+from unilabos.utils.decorator import topic_config
+
+class MyDevice:
+    @property
+    @topic_config(period=1.0, print_publish=False, qos=10)
+    def fast_data(self) -> float:
+        """高频数据 - 每秒发布一次"""
+        return self._fast_data
+
+    @property
+    @topic_config(period=5.0)
+    def slow_data(self) -> str:
+        """低频数据 - 每5秒发布一次"""
+        return self._slow_data
+```
+
+### 订阅装饰器
+
+```python
+from unilabos.utils.decorator import subscribe
+
+class MyDevice:
+    @subscribe(topic="/external/sensor_data", qos=10)
+    def on_sensor_data(self, msg):
+        """订阅外部Topic"""
+        self._sensor_value = msg.data
+```
+
+## 异步操作
+
+### 使用 ROS 节点睡眠
+
+```python
+# 推荐：使用ROS节点的睡眠方法
+await self._ros_node.sleep(1.0)
+
+# 不推荐：直接使用asyncio（可能导致回调阻塞）
+await asyncio.sleep(1.0)
+```
+
+### 获取事件循环
+
+```python
+from unilabos.ros.x.rclpyx import get_event_loop
+
+loop = get_event_loop()
+```
+
+## 消息类型
+
+### unilabos_msgs 包
+
+```python
+from unilabos_msgs.msg import Resource
+from unilabos_msgs.srv import (
+    ResourceAdd,
+    ResourceDelete,
+    ResourceUpdate,
+    ResourceList,
+    SerialCommand,
+)
+from unilabos_msgs.action import SendCmd
+```
+
+### Resource 消息结构
+
+```python
+Resource:
+    id: str
+    name: str
+    category: str
+    type: str
+    parent: str
+    children: List[str]
+    config: str  # JSON字符串
+    data: str    # JSON字符串
+    sample_id: str
+    pose: Pose
+```
+
+## 日志适配器
+
+```python
+from unilabos.utils.log import info, debug, warning, error, trace
+
+class MyDevice:
+    def __init__(self):
+        # 创建设备专属日志器
+        self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
+```
+
+ROSLoggerAdapter 同时向自定义日志和 ROS 日志发送消息。
+
+## Action Server
+
+设备动作自动创建为 ROS Action Server：
+
+```yaml
+# 在注册表中配置
+action_value_mappings:
+  my_action:
+    type: UniLabJsonCommandAsync  # 异步Action
+    goal: {...}
+    feedback: {...}
+    result: {...}
+```
+
+### Action 类型
+
+- **UniLabJsonCommand**: 同步动作
+- **UniLabJsonCommandAsync**: 异步动作（支持feedback）
+
+## 服务客户端
+
+```python
+from rclpy.client import Client
+
+# 调用其他节点的服务
+response = await self._ros_node.call_service(
+    service_name="/other_node/service",
+    request=MyServiceRequest(...)
+)
+```
+
+## 命名空间
+
+设备节点使用命名空间隔离：
+
+```
+/{device_id}/                 # 设备命名空间
+/{device_id}/status          # 状态Topic
+/{device_id}/temperature     # 温度Topic
+/{device_id}/my_action       # 动作Server
+```
+
+## 调试
+
+### 查看 Topic
+
+```bash
+ros2 topic list
+ros2 topic echo /{device_id}/status
+```
+
+### 查看 Action
+
+```bash
+ros2 action list
+ros2 action info /{device_id}/my_action
+```
+
+### 查看 Service
+
+```bash
+ros2 service list
+ros2 service call /{device_id}/resource_list unilabos_msgs/srv/ResourceList
+```
+
+## 最佳实践
+
+1. **状态属性命名**: 使用蛇形命名法（snake_case）
+2. **Topic 频率**: 根据数据变化频率调整，避免过高频率
+3. **Action 反馈**: 长时间操作提供进度反馈
+4. **错误处理**: 使用 try-except 捕获并记录错误
+5. **资源清理**: 在 cleanup 方法中正确清理资源

.cursor/rules/testing-patterns.mdc

@@ -0,0 +1,357 @@
+---
+description: 测试开发规范
+globs: ["tests/**/*.py", "**/test_*.py"]
+---
+
+# 测试开发规范
+
+## 目录结构
+
+```
+tests/
+├── __init__.py
+├── devices/              # 设备测试
+│   └── liquid_handling/
+│       └── test_transfer_liquid.py
+├── resources/            # 资源测试
+│   ├── test_bottle_carrier.py
+│   └── test_resourcetreeset.py
+├── ros/                  # ROS消息测试
+│   └── msgs/
+│       ├── test_basic.py
+│       ├── test_conversion.py
+│       └── test_mapping.py
+└── workflow/             # 工作流测试
+    └── merge_workflow.py
+```
+
+## 测试框架
+
+使用 pytest 作为测试框架：
+
+```bash
+# 运行所有测试
+pytest tests/
+
+# 运行特定测试文件
+pytest tests/resources/test_bottle_carrier.py
+
+# 运行特定测试函数
+pytest tests/resources/test_bottle_carrier.py::test_bottle_carrier
+
+# 显示详细输出
+pytest -v tests/
+
+# 显示打印输出
+pytest -s tests/
+```
+
+## 测试文件模板
+
+```python
+import pytest
+from typing import List, Dict, Any
+
+# 导入被测试的模块
+from unilabos.resources.bioyond.bottle_carriers import (
+    BIOYOND_Electrolyte_6VialCarrier,
+)
+from unilabos.resources.bioyond.bottles import (
+    BIOYOND_PolymerStation_Solid_Vial,
+)
+
+
+class TestBottleCarrier:
+    """BottleCarrier 测试类"""
+
+    def setup_method(self):
+        """每个测试方法前执行"""
+        self.carrier = BIOYOND_Electrolyte_6VialCarrier("test_carrier")
+
+    def teardown_method(self):
+        """每个测试方法后执行"""
+        pass
+
+    def test_carrier_creation(self):
+        """测试载架创建"""
+        assert self.carrier.name == "test_carrier"
+        assert len(self.carrier.sites) == 6
+
+    def test_bottle_placement(self):
+        """测试瓶子放置"""
+        bottle = BIOYOND_PolymerStation_Solid_Vial("test_bottle")
+        # 测试逻辑...
+        assert bottle.name == "test_bottle"
+
+
+def test_standalone_function():
+    """独立测试函数"""
+    result = some_function()
+    assert result is True
+
+
+# 参数化测试
+@pytest.mark.parametrize("input,expected", [
+    ("5 min", 300.0),
+    ("1 h", 3600.0),
+    ("120", 120.0),
+    (60, 60.0),
+])
+def test_time_parsing(input, expected):
+    """测试时间解析"""
+    from unilabos.compile.utils.unit_parser import parse_time_input
+    assert parse_time_input(input) == expected
+
+
+# 异常测试
+def test_invalid_input_raises_error():
+    """测试无效输入抛出异常"""
+    with pytest.raises(ValueError) as exc_info:
+        invalid_function("bad_input")
+    assert "invalid" in str(exc_info.value).lower()
+
+
+# 跳过条件测试
+@pytest.mark.skipif(
+    not os.environ.get("ROS_DISTRO"),
+    reason="需要ROS环境"
+)
+def test_ros_feature():
+    """需要ROS环境的测试"""
+    pass
+```
+
+## 设备测试
+
+### 虚拟设备测试
+
+```python
+import pytest
+import asyncio
+from unittest.mock import MagicMock, AsyncMock
+
+from unilabos.devices.virtual.virtual_stirrer import VirtualStirrer
+
+
+class TestVirtualStirrer:
+    """VirtualStirrer 测试"""
+
+    @pytest.fixture
+    def stirrer(self):
+        """创建测试用搅拌器"""
+        device = VirtualStirrer(
+            device_id="test_stirrer",
+            config={"max_speed": 1500.0, "min_speed": 50.0}
+        )
+
+        # Mock ROS节点
+        mock_node = MagicMock()
+        mock_node.sleep = AsyncMock(return_value=None)
+        device.post_init(mock_node)
+
+        return device
+
+    @pytest.mark.asyncio
+    async def test_initialize(self, stirrer):
+        """测试初始化"""
+        result = await stirrer.initialize()
+        assert result is True
+        assert stirrer.status == "待机中"
+
+    @pytest.mark.asyncio
+    async def test_stir_action(self, stirrer):
+        """测试搅拌动作"""
+        await stirrer.initialize()
+
+        result = await stirrer.stir(
+            stir_time=5.0,
+            stir_speed=300.0,
+            settling_time=2.0
+        )
+
+        assert result is True
+        assert stirrer.operation_mode == "Completed"
+
+    @pytest.mark.asyncio
+    async def test_stir_invalid_speed(self, stirrer):
+        """测试无效速度"""
+        await stirrer.initialize()
+
+        # 速度超出范围
+        result = await stirrer.stir(
+            stir_time=5.0,
+            stir_speed=2000.0,  # 超过max_speed
+            settling_time=0.0
+        )
+
+        assert result is False
+        assert "错误" in stirrer.status
+```
+
+### 异步测试配置
+
+```python
+# conftest.py
+import pytest
+import asyncio
+
+
+@pytest.fixture(scope="session")
+def event_loop():
+    """创建事件循环"""
+    loop = asyncio.get_event_loop_policy().new_event_loop()
+    yield loop
+    loop.close()
+```
+
+## 资源测试
+
+```python
+import pytest
+from unilabos.resources.resource_tracker import (
+    ResourceTreeSet,
+    ResourceTreeInstance,
+)
+
+
+def test_resource_tree_creation():
+    """测试资源树创建"""
+    tree_set = ResourceTreeSet()
+
+    # 添加资源
+    resource = {"id": "res_1", "name": "Resource 1"}
+    tree_set.add_resource(resource)
+
+    # 验证
+    assert len(tree_set.all_nodes) == 1
+    assert tree_set.get_resource("res_1") is not None
+
+
+def test_resource_tree_merge():
+    """测试资源树合并"""
+    local_set = ResourceTreeSet()
+    remote_set = ResourceTreeSet()
+
+    # 设置数据...
+
+    local_set.merge_remote_resources(remote_set)
+
+    # 验证合并结果...
+```
+
+## ROS 消息测试
+
+```python
+import pytest
+from unilabos.ros.msgs.message_converter import (
+    convert_to_ros_msg,
+    convert_from_ros_msg_with_mapping,
+    msg_converter_manager,
+)
+
+
+def test_message_conversion():
+    """测试消息转换"""
+    # Python -> ROS
+    python_data = {"id": "test", "value": 42}
+    ros_msg = convert_to_ros_msg(python_data, MyMsgType)
+
+    assert ros_msg.id == "test"
+    assert ros_msg.value == 42
+
+    # ROS -> Python
+    result = convert_from_ros_msg_with_mapping(ros_msg, mapping)
+    assert result["id"] == "test"
+```
+
+## 协议测试
+
+```python
+import pytest
+import networkx as nx
+from unilabos.compile.stir_protocol import (
+    generate_stir_protocol,
+    extract_vessel_id,
+)
+
+
+@pytest.fixture
+def topology_graph():
+    """创建测试拓扑图"""
+    G = nx.DiGraph()
+    G.add_node("flask_1", **{"class": "flask"})
+    G.add_node("stirrer_1", **{"class": "virtual_stirrer"})
+    G.add_edge("stirrer_1", "flask_1")
+    return G
+
+
+def test_generate_stir_protocol(topology_graph):
+    """测试搅拌协议生成"""
+    actions = generate_stir_protocol(
+        G=topology_graph,
+        vessel="flask_1",
+        time="5 min",
+        stir_speed=300.0
+    )
+
+    assert len(actions) == 1
+    assert actions[0]["device_id"] == "stirrer_1"
+    assert actions[0]["action_name"] == "stir"
+
+
+def test_extract_vessel_id():
+    """测试vessel_id提取"""
+    # 字典格式
+    assert extract_vessel_id({"id": "flask_1"}) == "flask_1"
+
+    # 字符串格式
+    assert extract_vessel_id("flask_2") == "flask_2"
+
+    # 空值
+    assert extract_vessel_id("") == ""
+```
+
+## 测试标记
+
+```python
+# 慢速测试
+@pytest.mark.slow
+def test_long_running():
+    pass
+
+# 需要网络
+@pytest.mark.network
+def test_network_call():
+    pass
+
+# 需要ROS
+@pytest.mark.ros
+def test_ros_feature():
+    pass
+```
+
+运行特定标记的测试：
+
+```bash
+pytest -m "not slow"  # 排除慢速测试
+pytest -m ros         # 仅ROS测试
+```
+
+## 覆盖率
+
+```bash
+# 生成覆盖率报告
+pytest --cov=unilabos tests/
+
+# HTML报告
+pytest --cov=unilabos --cov-report=html tests/
+```
+
+## 最佳实践
+
+1. **测试命名**: `test_{功能}_{场景}_{预期结果}`
+2. **独立性**: 每个测试独立运行，不依赖其他测试
+3. **Mock外部依赖**: 使用 unittest.mock 模拟外部服务
+4. **参数化**: 使用 `@pytest.mark.parametrize` 减少重复代码
+5. **fixtures**: 使用 fixtures 共享测试设置
+6. **断言清晰**: 每个断言只验证一件事

.cursor/rules/unilabos-project.mdc

@@ -0,0 +1,353 @@
+---
+description: Uni-Lab-OS 实验室自动化平台开发规范 - 核心规则
+globs: ["**/*.py", "**/*.yaml", "**/*.json"]
+---
+
+# Uni-Lab-OS 项目开发规范
+
+## 项目概述
+
+Uni-Lab-OS 是一个实验室自动化操作系统，用于连接和控制各种实验设备，实现实验工作流的自动化和标准化。
+
+## 技术栈
+
+- **Python 3.11** - 核心开发语言
+- **ROS 2** - 设备通信中间件 (rclpy)
+- **Conda/Mamba** - 包管理 (robostack-staging, conda-forge)
+- **FastAPI** - Web API 服务
+- **WebSocket** - 实时通信
+- **NetworkX** - 拓扑图管理
+- **YAML** - 配置和注册表定义
+- **PyLabRobot** - 实验室自动化库集成
+- **pytest** - 测试框架
+- **asyncio** - 异步编程
+
+## 项目结构
+
+```
+unilabos/
+├── app/           # 应用入口、Web服务、后端
+├── compile/       # 协议编译器 (stir, add, filter 等)
+├── config/        # 配置管理
+├── devices/       # 设备驱动 (真实/虚拟)
+├── device_comms/  # 设备通信协议
+├── device_mesh/   # 3D网格和可视化
+├── registry/      # 设备和资源类型注册表 (YAML)
+├── resources/     # 资源定义
+├── ros/           # ROS 2 集成
+├── utils/         # 工具函数
+└── workflow/      # 工作流管理
+```
+
+## 代码规范
+
+### Python 风格
+
+1. **类型注解**：所有函数必须使用类型注解
+   ```python
+   def transfer_liquid(
+       source: str,
+       destination: str,
+       volume: float,
+       **kwargs
+   ) -> List[Dict[str, Any]]:
+   ```
+
+2. **Docstring**：使用 Google 风格的文档字符串
+   ```python
+   def initialize(self) -> bool:
+       """
+       初始化设备
+
+       Returns:
+           bool: 初始化是否成功
+       """
+   ```
+
+3. **导入顺序**：
+   - 标准库
+   - 第三方库
+   - ROS 相关 (rclpy, unilabos_msgs)
+   - 项目内部模块
+
+### 异步编程
+
+1. 设备操作方法使用 `async def`
+2. 使用 `await self._ros_node.sleep()` 而非 `asyncio.sleep()`
+3. 长时间运行操作需提供进度反馈
+
+```python
+async def stir(self, stir_time: float, stir_speed: float, **kwargs) -> bool:
+    """执行搅拌操作"""
+    start_time = time_module.time()
+    while True:
+        elapsed = time_module.time() - start_time
+        remaining = max(0, stir_time - elapsed)
+
+        self.data.update({
+            "remaining_time": remaining,
+            "status": f"搅拌中: {stir_speed} RPM"
+        })
+
+        if remaining <= 0:
+            break
+        await self._ros_node.sleep(1.0)
+    return True
+```
+
+### 日志规范
+
+使用项目自定义日志系统：
+
+```python
+from unilabos.utils.log import logger, info, debug, warning, error, trace
+
+# 在设备类中使用
+self.logger = logging.getLogger(f"DeviceName.{self.device_id}")
+self.logger.info("设备初始化完成")
+```
+
+## 设备驱动开发
+
+### 设备类结构
+
+```python
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+
+class MyDevice:
+    """设备驱动类"""
+
+    _ros_node: BaseROS2DeviceNode
+
+    def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
+        self.device_id = device_id or "unknown_device"
+        self.config = config or {}
+        self.data = {}  # 设备状态数据
+
+    def post_init(self, ros_node: BaseROS2DeviceNode):
+        """ROS节点注入"""
+        self._ros_node = ros_node
+
+    async def initialize(self) -> bool:
+        """初始化设备"""
+        pass
+
+    async def cleanup(self) -> bool:
+        """清理设备"""
+        pass
+
+    # 状态属性 - 自动发布为 ROS Topic
+    @property
+    def status(self) -> str:
+        return self.data.get("status", "待机")
+```
+
+### 状态属性装饰器
+
+```python
+from unilabos.utils.decorator import topic_config
+
+class MyDevice:
+    @property
+    @topic_config(period=1.0, qos=10)  # 每秒发布一次
+    def temperature(self) -> float:
+        return self._temperature
+```
+
+### 虚拟设备
+
+虚拟设备放置在 `unilabos/devices/virtual/` 目录下，命名为 `virtual_*.py`
+
+## 注册表配置
+
+### 设备注册表 (YAML)
+
+位置: `unilabos/registry/devices/*.yaml`
+
+```yaml
+my_device_type:
+  category:
+    - my_category
+  description: "设备描述"
+  version: "1.0.0"
+  class:
+    module: "unilabos.devices.my_device:MyDevice"
+    type: python
+    status_types:
+      status: String
+      temperature: Float64
+    action_value_mappings:
+      auto-initialize:
+        type: UniLabJsonCommandAsync
+        goal: {}
+        feedback: {}
+        result: {}
+        schema: {...}
+```
+
+### 资源注册表 (YAML)
+
+位置: `unilabos/registry/resources/**/*.yaml`
+
+```yaml
+my_container:
+  category:
+    - container
+  class:
+    module: "unilabos.resources.my_resource:MyContainer"
+    type: pylabrobot
+  version: "1.0.0"
+```
+
+## 协议编译器
+
+位置: `unilabos/compile/*_protocol.py`
+
+### 协议生成函数模板
+
+```python
+from typing import List, Dict, Any, Union
+import networkx as nx
+
+def generate_my_protocol(
+    G: nx.DiGraph,
+    vessel: Union[str, dict],
+    param1: float = 0.0,
+    **kwargs
+) -> List[Dict[str, Any]]:
+    """
+    生成操作协议序列
+
+    Args:
+        G: 物理拓扑图
+        vessel: 容器ID或字典
+        param1: 参数1
+
+    Returns:
+        List[Dict]: 动作序列
+    """
+    # 提取vessel_id
+    vessel_id = vessel if isinstance(vessel, str) else vessel.get("id", "")
+
+    # 查找设备
+    device_id = find_connected_device(G, vessel_id)
+
+    # 生成动作
+    action_sequence = [{
+        "device_id": device_id,
+        "action_name": "my_action",
+        "action_kwargs": {
+            "vessel": {"id": vessel_id},
+            "param1": float(param1)
+        }
+    }]
+
+    return action_sequence
+```
+
+## 测试规范
+
+### 测试文件位置
+
+- 单元测试: `tests/` 目录
+- 设备测试: `tests/devices/`
+- 资源测试: `tests/resources/`
+- ROS消息测试: `tests/ros/msgs/`
+
+### 测试命名
+
+```python
+# tests/devices/my_device/test_my_device.py
+
+import pytest
+
+def test_device_initialization():
+    """测试设备初始化"""
+    pass
+
+def test_device_action():
+    """测试设备动作"""
+    pass
+```
+
+## 错误处理
+
+```python
+from unilabos.utils.exception import UniLabException
+
+try:
+    result = await device.execute_action()
+except ValueError as e:
+    self.logger.error(f"参数错误: {e}")
+    self.data["status"] = "错误: 参数无效"
+    return False
+except Exception as e:
+    self.logger.error(f"执行失败: {e}")
+    raise
+```
+
+## 配置管理
+
+```python
+from unilabos.config.config import BasicConfig, HTTPConfig
+
+# 读取配置
+port = BasicConfig.port
+is_host = BasicConfig.is_host_mode
+
+# 配置文件: local_config.py
+```
+
+## 常用工具
+
+### 单例模式
+
+```python
+from unilabos.utils.decorator import singleton
+
+@singleton
+class MyManager:
+    pass
+```
+
+### 类型检查
+
+```python
+from unilabos.utils.type_check import NoAliasDumper
+
+yaml.dump(data, f, Dumper=NoAliasDumper)
+```
+
+### 导入管理
+
+```python
+from unilabos.utils.import_manager import get_class
+
+device_class = get_class("unilabos.devices.my_device:MyDevice")
+```
+
+## Git 提交规范
+
+提交信息格式:
+```
+<type>(<scope>): <subject>
+
+<body>
+```
+
+类型:
+- `feat`: 新功能
+- `fix`: 修复bug
+- `docs`: 文档更新
+- `refactor`: 重构
+- `test`: 测试相关
+- `chore`: 构建/工具相关
+
+示例:
+```
+feat(devices): 添加虚拟搅拌器设备
+
+- 实现VirtualStirrer类
+- 支持定时搅拌和持续搅拌模式
+- 添加速度验证逻辑
+```

.cursor/skills/add-device/SKILL.md

@@ -0,0 +1,24 @@
+---
+name: add-device
+description: Guide for adding new devices to Uni-Lab-OS (接入新设备). Walks through device category selection (thing model), communication protocol, command protocol collection, driver creation, registry YAML, and graph file setup. Use when the user wants to add/integrate a new device, create a device driver, write a device class, configure device registry, or mentions 接入设备/添加设备/设备驱动/物模型.
+---
+
+# 添加新设备到 Uni-Lab-OS
+
+**第一步：** 使用 Read 工具读取 `docs/ai_guides/add_device.md`，获取完整的设备接入指南并严格遵循。
+
+该指南包含：
+- 8 步完整流程（设备类别、通信协议、指令收集、接口对齐、驱动创建、注册表、图文件、验证）
+- 所有物模型代码模板（注射泵、电磁阀、蠕动泵、温控、电机等）
+- 通信协议代码片段（Serial、Modbus、TCP、HTTP、OPC UA）
+- 现有设备接口快照（用于第四步对齐，包含参数名、status_types、方法签名）
+- 常见错误检查清单
+
+**Cursor 工具映射：**
+
+| 指南中的操作 | Cursor 中使用的工具 |
+|---|---|
+| 向用户确认设备类别、协议等信息 | 使用 AskQuestion 工具 |
+| 搜索已有设备注册表 | 使用 Grep 在 `unilabos/registry/devices/` 中搜索 |
+| 读取用户提供的协议文档/SDK 代码 | 使用 Read 工具 |
+| 第四步对齐：查找同类设备接口 | 优先使用 Grep 搜索仓库中的最新注册表；指南中的「现有设备接口快照」作为兜底参考 |

.cursor/skills/add-protocol/SKILL.md

@@ -0,0 +1,323 @@
+---
+name: add-protocol
+description: Guide for adding new experiment protocols to Uni-Lab-OS (添加新实验操作协议). Walks through ROS Action definition, Pydantic model creation, protocol generator implementation, and registration. Use when the user wants to add a new protocol, create a compile function, implement an experiment operation, or mentions 协议/protocol/编译/compile/实验操作.
+---
+
+# 添加新实验操作协议（Protocol）
+
+Protocol 是对实验有意义的完整动作（如泵转移、过滤、溶解），需要多设备协同。`compile/` 中的生成函数根据设备连接图将抽象操作"编译"为设备指令序列。
+
+添加一个 Protocol 需修改 **6 个文件**，按以下流程执行。
+
+---
+
+## 第一步：确认协议信息
+
+向用户确认：
+
+| 信息 | 示例 |
+|------|------|
+| 协议英文名 | `MyNewProtocol` |
+| 操作描述 | 将固体样品研磨至目标粒径 |
+| Goal 参数（必需 + 可选） | `vessel: dict`, `time: float = 300.0` |
+| Result 字段 | `success: bool`, `message: str` |
+| 需要哪些设备协同 | 研磨器、搅拌器 |
+
+---
+
+## 第二步：创建 ROS Action 定义
+
+路径：`unilabos_msgs/action/<ActionName>.action`
+
+三段式结构（Goal / Result / Feedback），用 `---` 分隔：
+
+```
+# Goal
+Resource vessel
+float64 time
+string mode
+---
+# Result
+bool success
+string return_info
+---
+# Feedback
+string status
+string current_device
+builtin_interfaces/Duration time_spent
+builtin_interfaces/Duration time_remaining
+```
+
+**类型映射：**
+
+| Python 类型 | ROS 类型 | 说明 |
+|------------|----------|------|
+| `dict` | `Resource` | 容器/设备引用，自定义消息类型 |
+| `float` | `float64` | |
+| `int` | `int32` | |
+| `str` | `string` | |
+| `bool` | `bool` | |
+
+> `Resource` 是 `unilabos_msgs/msg/Resource.msg` 中定义的自定义消息类型。
+
+---
+
+## 第三步：注册 Action 到 CMakeLists
+
+在 `unilabos_msgs/CMakeLists.txt` 的 `set(action_files ...)` 块中添加：
+
+```cmake
+"action/MyNewAction.action"
+```
+
+> 调试时需编译：`cd unilabos_msgs && colcon build && source ./install/local_setup.sh && cd ..`
+> PR 合并后 CI/CD 自动发布，`mamba update ros-humble-unilabos-msgs` 即可。
+
+---
+
+## 第四步：创建 Pydantic 模型
+
+在 `unilabos/messages/__init__.py` 中添加（位于 `# Start Protocols` 和 `# End Protocols` 之间）：
+
+```python
+class MyNewProtocol(BaseModel):
+    # === 必需参数 ===
+    vessel: dict = Field(..., description="目标容器")
+    
+    # === 可选参数 ===
+    time: float = Field(300.0, description="操作时间 (秒)")
+    mode: str = Field("default", description="操作模式")
+    
+    def model_post_init(self, __context):
+        """参数验证和修正"""
+        if self.time <= 0:
+            self.time = 300.0
+```
+
+**规则：**
+- 参数名必须与 `.action` 文件中 Goal 字段完全一致
+- `dict` 类型对应 `.action` 中的 `Resource`
+- 将类名加入文件末尾的 `__all__` 列表
+
+---
+
+## 第五步：实现协议生成函数
+
+路径：`unilabos/compile/<protocol_name>_protocol.py`
+
+```python
+import networkx as nx
+from typing import List, Dict, Any
+
+
+def generate_my_new_protocol(
+    G: nx.DiGraph,
+    vessel: dict,
+    time: float = 300.0,
+    mode: str = "default",
+    **kwargs,
+) -> List[Dict[str, Any]]:
+    """将 MyNewProtocol 编译为设备动作序列。
+    
+    Args:
+        G: 设备连接图（NetworkX），节点为设备/容器，边为物理连接
+        vessel: 目标容器 {"id": "reactor_1"}
+        time: 操作时间（秒）
+        mode: 操作模式
+    
+    Returns:
+        动作列表，每个元素为:
+        - dict: 单步动作
+        - list[dict]: 并行动作
+    """
+    from unilabos.compile.utils.vessel_parser import get_vessel
+    
+    vessel_id, vessel_data = get_vessel(vessel)
+    actions = []
+    
+    # 查找相关设备（通过图的连接关系）
+    # 生成动作序列
+    actions.append({
+        "device_id": "target_device_id",
+        "action_name": "some_action",
+        "action_kwargs": {"param": "value"}
+    })
+    
+    # 等待
+    actions.append({
+        "action_name": "wait",
+        "action_kwargs": {"time": time}
+    })
+    
+    return actions
+```
+
+### 动作字典格式
+
+```python
+# 单步动作（发给子设备）
+{"device_id": "pump_1", "action_name": "set_position", "action_kwargs": {"position": 10.0}}
+
+# 发给工作站自身
+{"device_id": "self", "action_name": "my_action", "action_kwargs": {...}}
+
+# 等待
+{"action_name": "wait", "action_kwargs": {"time": 5.0}}
+
+# 并行动作（列表嵌套）
+[
+    {"device_id": "pump_1", "action_name": "set_position", "action_kwargs": {"position": 10.0}},
+    {"device_id": "stirrer_1", "action_name": "start_stir", "action_kwargs": {"stir_speed": 300}}
+]
+```
+
+### 关于 `vessel` 参数类型
+
+现有协议的 `vessel` 参数类型不统一：
+- 新协议趋势：使用 `dict`（如 `{"id": "reactor_1"}`）
+- 旧协议：使用 `str`（如 `"reactor_1"`）
+- 兼容写法：`Union[str, dict]`
+
+**建议新协议统一使用 `dict` 类型**，通过 `get_vessel()` 兼容两种输入。
+
+### 公共工具函数（`unilabos/compile/utils/`）
+
+| 函数 | 用途 |
+|------|------|
+| `get_vessel(vessel)` | 解析容器参数为 `(vessel_id, vessel_data)`，兼容 dict 和 str |
+| `find_solvent_vessel(G, solvent)` | 根据溶剂名查找容器（精确→命名规则→模糊→液体类型） |
+| `find_reagent_vessel(G, reagent)` | 根据试剂名查找容器（支持固体和液体） |
+| `find_connected_stirrer(G, vessel)` | 查找与容器相连的搅拌器 |
+| `find_solid_dispenser(G)` | 查找固体加样器 |
+
+### 协议内专属查找函数
+
+许多协议在自己的文件内定义了专属的 `find_*` 函数（不在 `utils/` 中）。编写新协议时，优先复用 `utils/` 中的公共函数；如需特殊查找逻辑，在协议文件内部定义即可：
+
+```python
+def find_my_special_device(G: nx.DiGraph, vessel: str) -> str:
+    """查找与容器相关的特殊设备"""
+    for node in G.nodes():
+        if 'my_device_type' in G.nodes[node].get('class', '').lower():
+            return node
+    raise ValueError("未找到特殊设备")
+```
+
+### 复用已有协议
+
+复杂协议通常组合已有协议：
+
+```python
+from unilabos.compile.pump_protocol import generate_pump_protocol_with_rinsing
+
+actions.extend(generate_pump_protocol_with_rinsing(
+    G, from_vessel=solvent_vessel, to_vessel=vessel, volume=volume
+))
+```
+
+### 图查询模式
+
+```python
+# 查找与容器相连的特定类型设备
+for neighbor in G.neighbors(vessel_id):
+    node_data = G.nodes[neighbor]
+    if "heater" in node_data.get("class", ""):
+        heater_id = neighbor
+        break
+
+# 查找最短路径（泵转移）
+path = nx.shortest_path(G, source=from_vessel_id, target=to_vessel_id)
+```
+
+---
+
+## 第六步：注册协议生成函数
+
+在 `unilabos/compile/__init__.py` 中：
+
+1. 顶部添加导入：
+
+```python
+from .my_new_protocol import generate_my_new_protocol
+```
+
+2. 在 `action_protocol_generators` 字典中添加映射：
+
+```python
+action_protocol_generators = {
+    # ... 已有协议
+    MyNewProtocol: generate_my_new_protocol,
+}
+```
+
+---
+
+## 第七步：配置图文件
+
+在工作站的图文件中，将协议名加入 `protocol_type`：
+
+```json
+{
+    "id": "my_station",
+    "class": "workstation",
+    "config": {
+        "protocol_type": ["PumpTransferProtocol", "MyNewProtocol"]
+    }
+}
+```
+
+---
+
+## 第八步：验证
+
+```bash
+# 1. 模块可导入
+python -c "from unilabos.messages import MyNewProtocol; print(MyNewProtocol.model_fields)"
+
+# 2. 生成函数可导入
+python -c "from unilabos.compile import action_protocol_generators; print(list(action_protocol_generators.keys()))"
+
+# 3. 启动测试（可选）
+unilab -g <graph>.json --complete_registry
+```
+
+---
+
+## 工作流清单
+
+```
+协议接入进度：
+- [ ] 1. 确认协议名、参数、涉及设备
+- [ ] 2. 创建 .action 文件 (unilabos_msgs/action/<Name>.action)
+- [ ] 3. 注册到 CMakeLists.txt
+- [ ] 4. 创建 Pydantic 模型 (unilabos/messages/__init__.py) + 更新 __all__
+- [ ] 5. 实现生成函数 (unilabos/compile/<name>_protocol.py)
+- [ ] 6. 注册到 compile/__init__.py
+- [ ] 7. 配置图文件 protocol_type
+- [ ] 8. 验证
+```
+
+---
+
+## 高级模式
+
+实现复杂协议时，详见 [reference.md](reference.md)：协议运行时数据流、mock graph 测试模式、单位解析工具（`unit_parser.py`）、复杂协议组合模式（以 dissolve 为例）。
+
+---
+
+## 现有协议速查
+
+| 协议 | Pydantic 类 | 生成函数 | 核心参数 |
+|------|-------------|---------|---------|
+| 泵转移 | `PumpTransferProtocol` | `generate_pump_protocol_with_rinsing` | `from_vessel, to_vessel, volume` |
+| 简单转移 | `TransferProtocol` | `generate_pump_protocol` | `from_vessel, to_vessel, volume` |
+| 加样 | `AddProtocol` | `generate_add_protocol` | `vessel, reagent, volume` |
+| 过滤 | `FilterProtocol` | `generate_filter_protocol` | `vessel, filtrate_vessel` |
+| 溶解 | `DissolveProtocol` | `generate_dissolve_protocol` | `vessel, solvent, volume` |
+| 加热/冷却 | `HeatChillProtocol` | `generate_heat_chill_protocol` | `vessel, temp, time` |
+| 搅拌 | `StirProtocol` | `generate_stir_protocol` | `vessel, time` |
+| 分离 | `SeparateProtocol` | `generate_separate_protocol` | `from_vessel, separation_vessel, solvent` |
+| 蒸发 | `EvaporateProtocol` | `generate_evaporate_protocol` | `vessel, pressure, temp, time` |
+| 清洗 | `CleanProtocol` | `generate_clean_protocol` | `vessel, solvent, volume` |
+| 离心 | `CentrifugeProtocol` | `generate_centrifuge_protocol` | `vessel, speed, time` |
+| 抽气充气 | `EvacuateAndRefillProtocol` | `generate_evacuateandrefill_protocol` | `vessel, gas` |

.cursor/skills/add-protocol/reference.md

@@ -0,0 +1,207 @@
+# 协议高级参考
+
+本文件是 SKILL.md 的补充，包含协议运行时数据流、测试模式、单位解析工具和复杂协议组合模式。Agent 在需要实现这些功能时按需阅读。
+
+---
+
+## 1. 协议运行时数据流
+
+从图文件到协议执行的完整链路：
+
+```
+实验图 JSON
+    ↓  graphio.read_node_link_json()
+physical_setup_graph (NetworkX DiGraph)
+    ↓  ROS2WorkstationNode._setup_protocol_names(protocol_type)
+为每个 protocol_name 创建 ActionServer
+    ↓  收到 Action Goal
+_create_protocol_execute_callback()
+    ↓  convert_from_ros_msg_with_mapping(goal, mapping)
+protocol_kwargs (Python dict)
+    ↓  向 Host 查询 Resource 类型参数的当前状态
+protocol_kwargs 更新（vessel 带上 children、data 等）
+    ↓  protocol_steps_generator(G=physical_setup_graph, **protocol_kwargs)
+List[Dict] 动作序列
+    ↓  逐步 execute_single_action / 并行 create_task
+子设备 ActionClient 执行
+```
+
+### `_setup_protocol_names` 核心逻辑
+
+```python
+def _setup_protocol_names(self, protocol_type):
+    if isinstance(protocol_type, str):
+        self.protocol_names = [p.strip() for p in protocol_type.split(",")]
+    else:
+        self.protocol_names = protocol_type
+    self.protocol_action_mappings = {}
+    for protocol_name in self.protocol_names:
+        protocol_type = globals()[protocol_name]  # 从 messages 模块取 Pydantic 类
+        self.protocol_action_mappings[protocol_name] = get_action_type(protocol_type)
+```
+
+### `_create_protocol_execute_callback` 关键步骤
+
+1. `convert_from_ros_msg_with_mapping(goal, action_value_mapping["goal"])` — ROS Goal → Python dict
+2. 对 `Resource` 类型字段，通过 `resource_get` Service 查询 Host 的最新资源状态
+3. `protocol_steps_generator(G=physical_setup_graph, **protocol_kwargs)` — 调用编译函数
+4. 遍历 steps：`dict` 串行执行，`list` 并行执行
+5. `execute_single_action` 通过 `_action_clients[device_id]` 向子设备发送 Action Goal
+6. 执行完毕后通过 `resource_update` Service 更新资源状态
+
+---
+
+## 2. 测试模式
+
+### 2.1 协议文件内测试函数
+
+许多协议文件末尾有 `test_*` 函数，主要测试参数解析工具：
+
+```python
+def test_dissolve_protocol():
+    """测试溶解协议的各种参数解析"""
+    volumes = ["10 mL", "?", 10.0, "1 L", "500 μL"]
+    for vol in volumes:
+        result = parse_volume_input(vol)
+        print(f"体积解析: {vol} → {result}mL")
+
+    masses = ["2.9 g", "?", 2.5, "500 mg"]
+    for mass in masses:
+        result = parse_mass_input(mass)
+        print(f"质量解析: {mass} → {result}g")
+```
+
+### 2.2 使用 mock graph 测试协议生成器
+
+推荐的端到端测试模式：
+
+```python
+import pytest
+import networkx as nx
+from unilabos.compile.stir_protocol import generate_stir_protocol
+
+
+@pytest.fixture
+def topology_graph():
+    """创建测试拓扑图"""
+    G = nx.DiGraph()
+    G.add_node("flask_1", **{"class": "flask", "type": "container"})
+    G.add_node("stirrer_1", **{"class": "virtual_stirrer", "type": "device"})
+    G.add_edge("stirrer_1", "flask_1")
+    return G
+
+
+def test_generate_stir_protocol(topology_graph):
+    """测试搅拌协议生成"""
+    actions = generate_stir_protocol(
+        G=topology_graph,
+        vessel="flask_1",
+        time="5 min",
+        stir_speed=300.0
+    )
+    assert len(actions) >= 1
+    assert actions[0]["device_id"] == "stirrer_1"
+```
+
+**要点：**
+- 用 `nx.DiGraph()` 构建最小拓扑
+- `add_node(id, **attrs)` 设置 `class`、`type`、`data` 等
+- `add_edge(src, dst)` 建立物理连接
+- 协议内的 `find_*` 函数依赖这些节点和边
+
+---
+
+## 3. 单位解析工具
+
+路径：`unilabos/compile/utils/unit_parser.py`
+
+| 函数 | 输入 | 返回 | 默认值 |
+|------|------|------|--------|
+| `parse_volume_input(input, default_unit)` | `"100 mL"`, `"2.5 L"`, `"500 μL"`, `10.0`, `"?"` | mL (float) | 50.0 |
+| `parse_mass_input(input)` | `"19.3 g"`, `"500 mg"`, `2.5`, `"?"` | g (float) | 1.0 |
+| `parse_time_input(input)` | `"30 min"`, `"1 h"`, `"300"`, `60.0`, `"?"` | 秒 (float) | 60.0 |
+
+支持的单位：
+
+- **体积**: mL, L, μL/uL, milliliter, liter, microliter
+- **质量**: g, mg, kg, gram, milligram, kilogram
+- **时间**: s/sec/second, min/minute, h/hr/hour, d/day
+
+特殊值 `"?"`、`"unknown"`、`"tbd"` 返回默认值。
+
+---
+
+## 4. 复杂协议组合模式
+
+以 `dissolve_protocol` 为例，展示如何组合多个子操作：
+
+### 整体流程
+
+```
+1. 解析参数 (parse_volume_input, parse_mass_input, parse_time_input)
+2. 设备发现 (find_connected_heatchill, find_connected_stirrer, find_solid_dispenser)
+3. 判断溶解类型 (液体 vs 固体)
+4. 组合动作序列:
+   a. heat_chill_start / start_stir  (启动加热/搅拌)
+   b. wait                           (等待温度稳定)
+   c. pump_protocol_with_rinsing     (液体转移, 通过 extend 拼接)
+      或 add_solid                   (固体加样)
+   d. heat_chill / stir / wait       (溶解等待)
+   e. heat_chill_stop                (停止加热)
+```
+
+### 关键代码模式
+
+**设备发现 → 条件组合：**
+
+```python
+heatchill_id = find_connected_heatchill(G, vessel_id)
+stirrer_id = find_connected_stirrer(G, vessel_id)
+solid_dispenser_id = find_solid_dispenser(G)
+
+actions = []
+
+# 启动阶段
+if heatchill_id and temp > 25.0:
+    actions.append({
+        "device_id": heatchill_id,
+        "action_name": "heat_chill_start",
+        "action_kwargs": {"vessel": {"id": vessel_id}, "temp": temp}
+    })
+    actions.append({"action_name": "wait", "action_kwargs": {"time": 30}})
+elif stirrer_id:
+    actions.append({
+        "device_id": stirrer_id,
+        "action_name": "start_stir",
+        "action_kwargs": {"vessel": {"id": vessel_id}, "stir_speed": stir_speed}
+    })
+
+# 转移阶段（复用已有协议）
+pump_actions = generate_pump_protocol_with_rinsing(
+    G=G, from_vessel=solvent_vessel, to_vessel=vessel_id, volume=volume
+)
+actions.extend(pump_actions)
+
+# 等待阶段
+if heatchill_id:
+    actions.append({
+        "device_id": heatchill_id,
+        "action_name": "heat_chill",
+        "action_kwargs": {"vessel": {"id": vessel_id}, "temp": temp, "time": time}
+    })
+else:
+    actions.append({"action_name": "wait", "action_kwargs": {"time": time}})
+```
+
+---
+
+## 5. 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| 协议执行回调 | `unilabos/ros/nodes/presets/workstation.py` |
+| ROS 消息映射 | `unilabos/ros/msgs/message_converter.py` |
+| 物理拓扑图 | `unilabos/resources/graphio.py` (`physical_setup_graph`) |
+| 单位解析 | `unilabos/compile/utils/unit_parser.py` |
+| 容器解析 | `unilabos/compile/utils/vessel_parser.py` |
+| 溶解协议（组合示例） | `unilabos/compile/dissolve_protocol.py` |

.cursor/skills/add-resource/SKILL.md

@@ -0,0 +1,371 @@
+---
+name: add-resource
+description: Guide for adding new resources (materials, bottles, carriers, decks, warehouses) to Uni-Lab-OS (添加新物料/资源). Covers Bottle, Carrier, Deck, WareHouse definitions and registry YAML. Use when the user wants to add resources, define materials, create a deck layout, add bottles/carriers/plates, or mentions 物料/资源/resource/bottle/carrier/deck/plate/warehouse.
+---
+
+# 添加新物料资源
+
+Uni-Lab-OS 的资源体系基于 PyLabRobot，通过扩展实现 Bottle、Carrier、WareHouse、Deck 等实验室物料管理。
+
+---
+
+## 第一步：确认资源类型
+
+向用户确认需要添加的资源类型：
+
+| 类型 | 基类 | 用途 | 示例 |
+|------|------|------|------|
+| **Bottle** | `Well` (PyLabRobot) | 单个容器（瓶、小瓶、烧杯、反应器） | 试剂瓶、粉末瓶 |
+| **BottleCarrier** | `ItemizedCarrier` | 多槽位载架（放多个 Bottle） | 6 位试剂架、枪头盒 |
+| **WareHouse** | `ItemizedCarrier` | 堆栈/仓库（放多个 Carrier） | 4x4 堆栈 |
+| **Deck** | `Deck` (PyLabRobot) | 工作站台面（放多个 WareHouse） | 反应站 Deck |
+
+**层级关系：** `Deck` → `WareHouse` → `BottleCarrier` → `Bottle`
+
+还需确认：
+- 资源所属的项目/场景（如 bioyond、battery、通用）
+- 尺寸参数（直径、高度、最大容积等）
+- 布局参数（行列数、间距等）
+
+---
+
+## 第二步：创建资源定义
+
+### 文件位置
+
+```
+unilabos/resources/
+├── <project>/          # 按项目分组
+│   ├── bottles.py      # Bottle 工厂函数
+│   ├── bottle_carriers.py  # Carrier 工厂函数
+│   ├── warehouses.py   # WareHouse 工厂函数
+│   └── decks.py        # Deck 类定义
+├── itemized_carrier.py # Bottle, BottleCarrier, ItemizedCarrier 基类
+├── warehouse.py        # WareHouse 基类
+└── container.py        # 通用容器
+```
+
+### 2A. 添加 Bottle（工厂函数）
+
+```python
+from unilabos.resources.itemized_carrier import Bottle
+
+
+def My_Reagent_Bottle(
+    name: str,
+    diameter: float = 70.0,     # 瓶体直径 (mm)
+    height: float = 120.0,      # 瓶体高度 (mm)
+    max_volume: float = 500000.0,  # 最大容积 (μL)
+    barcode: str = None,
+) -> Bottle:
+    """创建试剂瓶"""
+    return Bottle(
+        name=name,
+        diameter=diameter,
+        height=height,
+        max_volume=max_volume,
+        barcode=barcode,
+        model="My_Reagent_Bottle",  # 唯一标识，用于注册表和物料映射
+    )
+```
+
+**Bottle 参数：**
+- `name`: 实例名称（运行时唯一）
+- `diameter`: 瓶体直径 (mm)
+- `height`: 瓶体高度 (mm)
+- `max_volume`: 最大容积 (**μL**，注意单位！500mL = 500000)
+- `barcode`: 条形码（可选）
+- `model`: 模型标识，与注册表 key 一致
+
+### 2B. 添加 BottleCarrier（工厂函数）
+
+```python
+from pylabrobot.resources import ResourceHolder
+from pylabrobot.resources.carrier import create_ordered_items_2d
+
+from unilabos.resources.itemized_carrier import BottleCarrier
+
+
+def My_6SlotCarrier(name: str) -> BottleCarrier:
+    """创建 3x2 六槽位载架"""
+    sites = create_ordered_items_2d(
+        klass=ResourceHolder,
+        num_items_x=3,       # 列数
+        num_items_y=2,       # 行数
+        dx=10.0,             # X 起始偏移
+        dy=10.0,             # Y 起始偏移
+        dz=5.0,              # Z 偏移
+        item_dx=42.0,        # X 间距
+        item_dy=35.0,        # Y 间距
+        size_x=20.0,         # 槽位宽
+        size_y=20.0,         # 槽位深
+        size_z=50.0,         # 槽位高
+    )
+    carrier = BottleCarrier(
+        name=name,
+        size_x=146.0,        # 载架总宽
+        size_y=80.0,         # 载架总深
+        size_z=55.0,         # 载架总高
+        sites=sites,
+        model="My_6SlotCarrier",
+    )
+    carrier.num_items_x = 3
+    carrier.num_items_y = 2
+    carrier.num_items_z = 1
+
+    # 预装 Bottle（可选）
+    ordering = ["A01", "A02", "A03", "B01", "B02", "B03"]
+    for i in range(6):
+        carrier[i] = My_Reagent_Bottle(f"{ordering[i]}")
+
+    return carrier
+```
+
+### 2C. 添加 WareHouse（工厂函数）
+
+```python
+from unilabos.resources.warehouse import warehouse_factory
+
+
+def my_warehouse_4x4(name: str) -> "WareHouse":
+    """创建 4行x4列 堆栈仓库"""
+    return warehouse_factory(
+        name=name,
+        num_items_x=4,            # 列数
+        num_items_y=4,            # 行数
+        num_items_z=1,            # 层数（通常为 1）
+        dx=137.0,                 # X 起始偏移
+        dy=96.0,                  # Y 起始偏移
+        dz=120.0,                 # Z 起始偏移
+        item_dx=137.0,            # X 间距
+        item_dy=125.0,            # Y 间距
+        item_dz=10.0,             # Z 间距（多层时用）
+        resource_size_x=127.0,    # 槽位宽
+        resource_size_y=85.0,     # 槽位深
+        resource_size_z=100.0,    # 槽位高
+        model="my_warehouse_4x4",
+    )
+```
+
+**`warehouse_factory` 参数说明：**
+
+| 参数 | 说明 |
+|------|------|
+| `num_items_x/y/z` | 列数/行数/层数 |
+| `dx, dy, dz` | 第一个槽位的起始坐标偏移 |
+| `item_dx, item_dy, item_dz` | 相邻槽位间距 |
+| `resource_size_x/y/z` | 单个槽位的物理尺寸 |
+| `col_offset` | 列命名偏移（如设 4 则从 A05 开始） |
+| `row_offset` | 行命名偏移（如设 5 则从 F 行开始） |
+| `layout` | 排序方式：`"col-major"`（列优先，默认）/ `"row-major"`（行优先） |
+| `removed_positions` | 要移除的位置索引列表 |
+
+自动生成 `ResourceHolder` 槽位，命名规则为 `A01, B01, C01, D01, A02, ...`（列优先）或 `A01, A02, A03, A04, B01, ...`（行优先）。
+
+### 2D. 添加 Deck（类定义）
+
+```python
+from pylabrobot.resources import Deck, Coordinate
+
+
+class MyStation_Deck(Deck):
+    def __init__(
+        self,
+        name: str = "MyStation_Deck",
+        size_x: float = 2700.0,
+        size_y: float = 1080.0,
+        size_z: float = 1500.0,
+        category: str = "deck",
+        setup: bool = False,
+    ) -> None:
+        super().__init__(name=name, size_x=size_x, size_y=size_y, size_z=size_z)
+        if setup:
+            self.setup()
+
+    def setup(self) -> None:
+        self.warehouses = {
+            "仓库A": my_warehouse_4x4("仓库A"),
+            "仓库B": my_warehouse_4x4("仓库B"),
+        }
+        self.warehouse_locations = {
+            "仓库A": Coordinate(-200.0, 400.0, 0.0),
+            "仓库B": Coordinate(2350.0, 400.0, 0.0),
+        }
+        for wh_name, wh in self.warehouses.items():
+            self.assign_child_resource(wh, location=self.warehouse_locations[wh_name])
+```
+
+**Deck 要点：**
+- 继承 `pylabrobot.resources.Deck`
+- `setup()` 创建 WareHouse 并通过 `assign_child_resource` 放置到指定坐标
+- `setup` 参数控制是否在构造时自动调用 `setup()`（图文件中通过 `config.setup: true` 触发）
+
+---
+
+## 第三步：创建注册表 YAML
+
+路径：`unilabos/registry/resources/<project>/<type>.yaml`
+
+### Bottle 注册
+
+```yaml
+My_Reagent_Bottle:
+  category:
+  - bottles
+  class:
+    module: unilabos.resources.my_project.bottles:My_Reagent_Bottle
+    type: pylabrobot
+  description: 我的试剂瓶
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  version: 1.0.0
+```
+
+### Carrier 注册
+
+```yaml
+My_6SlotCarrier:
+  category:
+  - bottle_carriers
+  class:
+    module: unilabos.resources.my_project.bottle_carriers:My_6SlotCarrier
+    type: pylabrobot
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  version: 1.0.0
+```
+
+### Deck 注册
+
+```yaml
+MyStation_Deck:
+  category:
+  - deck
+  class:
+    module: unilabos.resources.my_project.decks:MyStation_Deck
+    type: pylabrobot
+  description: 我的工作站 Deck
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  registry_type: resource
+  version: 1.0.0
+```
+
+**注册表规则：**
+- `class.module` 格式为 `python.module.path:ClassName_or_FunctionName`
+- `class.type` 固定为 `pylabrobot`
+- Key（如 `My_Reagent_Bottle`）必须与工厂函数名 / 类名一致
+- `category` 按类型标注（`bottles`, `bottle_carriers`, `deck` 等）
+
+---
+
+## 第四步：在图文件中引用
+
+### Deck 在工作站中的引用
+
+工作站节点通过 `deck` 字段引用，Deck 作为子节点：
+
+```json
+{
+    "id": "my_station",
+    "children": ["my_deck"],
+    "deck": {
+        "data": {
+            "_resource_child_name": "my_deck",
+            "_resource_type": "unilabos.resources.my_project.decks:MyStation_Deck"
+        }
+    }
+},
+{
+    "id": "my_deck",
+    "parent": "my_station",
+    "type": "deck",
+    "class": "MyStation_Deck",
+    "config": {"type": "MyStation_Deck", "setup": true}
+}
+```
+
+### 物料类型映射（外部系统对接时）
+
+如果工作站需要与外部系统同步物料，在 config 中配置 `material_type_mappings`：
+
+```json
+"material_type_mappings": {
+    "My_Reagent_Bottle": ["试剂瓶", "external-type-uuid"],
+    "My_6SlotCarrier": ["六槽载架", "external-type-uuid"]
+}
+```
+
+---
+
+## 第五步：注册 PLR 扩展（如需要）
+
+如果添加了新的 Deck 类，需要在 `unilabos/resources/plr_additional_res_reg.py` 中导入，使 `find_subclass` 能发现它：
+
+```python
+def register():
+    from unilabos.resources.my_project.decks import MyStation_Deck
+```
+
+---
+
+## 第六步：验证
+
+```bash
+# 1. 资源可导入
+python -c "from unilabos.resources.my_project.bottles import My_Reagent_Bottle; print(My_Reagent_Bottle('test'))"
+
+# 2. Deck 可创建
+python -c "
+from unilabos.resources.my_project.decks import MyStation_Deck
+d = MyStation_Deck('test', setup=True)
+print(d.children)
+"
+
+# 3. 启动测试
+unilab -g <graph>.json --complete_registry
+```
+
+---
+
+## 工作流清单
+
+```
+资源接入进度：
+- [ ] 1. 确定资源类型（Bottle / Carrier / WareHouse / Deck）
+- [ ] 2. 创建资源定义（工厂函数/类）
+- [ ] 3. 创建注册表 YAML (unilabos/registry/resources/<project>/<type>.yaml)
+- [ ] 4. 在图文件中引用（如需要）
+- [ ] 5. 注册 PLR 扩展（Deck 类需要）
+- [ ] 6. 验证
+```
+
+---
+
+## 高级模式
+
+实现复杂资源系统时，详见 [reference.md](reference.md)：类继承体系完整图、序列化/反序列化流程、Bioyond 物料双向同步、非瓶类资源（ElectrodeSheet / Magazine）、仓库工厂 layout 模式。
+
+---
+
+## 现有资源参考
+
+| 项目 | Bottles | Carriers | WareHouses | Decks |
+|------|---------|----------|------------|-------|
+| bioyond | `bioyond/bottles.py` | `bioyond/bottle_carriers.py` | `bioyond/warehouses.py`, `YB_warehouses.py` | `bioyond/decks.py` |
+| battery | — | `battery/bottle_carriers.py` | — | — |
+| 通用 | — | — | `warehouse.py` | — |
+
+### 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| Bottle/Carrier 基类 | `unilabos/resources/itemized_carrier.py` |
+| WareHouse 基类 + 工厂 | `unilabos/resources/warehouse.py` |
+| PLR 注册 | `unilabos/resources/plr_additional_res_reg.py` |
+| 资源注册表 | `unilabos/registry/resources/` |
+| 图文件加载 | `unilabos/resources/graphio.py` |
+| 资源跟踪器 | `unilabos/resources/resource_tracker.py` |

.cursor/skills/add-resource/reference.md

@@ -0,0 +1,292 @@
+# 资源高级参考
+
+本文件是 SKILL.md 的补充，包含类继承体系、序列化/反序列化、Bioyond 物料同步、非瓶类资源和仓库工厂模式。Agent 在需要实现这些功能时按需阅读。
+
+---
+
+## 1. 类继承体系
+
+```
+PyLabRobot
+├── Resource (PLR 基类)
+│   ├── Well
+│   │   └── Bottle (unilabos)        → 瓶/小瓶/烧杯/反应器
+│   ├── Deck
+│   │   └── 自定义 Deck 类 (unilabos) → 工作站台面
+│   ├── ResourceHolder               → 槽位占位符
+│   └── Container
+│       └── Battery (unilabos)       → 组装好的电池
+│
+├── ItemizedCarrier (unilabos, 继承 Resource)
+│   ├── BottleCarrier (unilabos)     → 瓶载架
+│   └── WareHouse (unilabos)         → 堆栈仓库
+│
+├── ItemizedResource (PLR)
+│   └── MagazineHolder (unilabos)    → 子弹夹载架
+│
+└── ResourceStack (PLR)
+    └── Magazine (unilabos)          → 子弹夹洞位
+```
+
+### Bottle 类细节
+
+```python
+class Bottle(Well):
+    def __init__(self, name, diameter, height, max_volume,
+                 size_x=0.0, size_y=0.0, size_z=0.0,
+                 barcode=None, category="container", model=None, **kwargs):
+        super().__init__(
+            name=name,
+            size_x=diameter,    # PLR 用 diameter 作为 size_x/size_y
+            size_y=diameter,
+            size_z=height,      # PLR 用 height 作为 size_z
+            max_volume=max_volume,
+            category=category,
+            model=model,
+            bottom_type="flat",
+            cross_section_type="circle"
+        )
+```
+
+注意 `size_x = size_y = diameter`，`size_z = height`。
+
+### ItemizedCarrier 核心方法
+
+| 方法 | 说明 |
+|------|------|
+| `__getitem__(identifier)` | 通过索引或 Excel 标识（如 `"A01"`）访问槽位 |
+| `__setitem__(identifier, resource)` | 向槽位放入资源 |
+| `get_child_identifier(child)` | 获取子资源的标识符 |
+| `capacity` | 总槽位数 |
+| `sites` | 所有槽位字典 |
+
+---
+
+## 2. 序列化与反序列化
+
+### PLR ↔ UniLab 转换
+
+| 函数 | 位置 | 方向 |
+|------|------|------|
+| `ResourceTreeSet.from_plr_resources(resources)` | `resource_tracker.py` | PLR → UniLab |
+| `ResourceTreeSet.to_plr_resources()` | `resource_tracker.py` | UniLab → PLR |
+
+### `from_plr_resources` 流程
+
+```
+PLR Resource
+    ↓ build_uuid_mapping (递归生成 UUID)
+    ↓ resource.serialize() → dict
+    ↓ resource.serialize_all_state() → states
+    ↓ resource_plr_inner (递归构建 ResourceDictInstance)
+ResourceTreeSet
+```
+
+关键：每个 PLR 资源通过 `unilabos_uuid` 属性携带 UUID，`unilabos_extra` 携带扩展数据（如 `class` 名）。
+
+### `to_plr_resources` 流程
+
+```
+ResourceTreeSet
+    ↓ collect_node_data (收集 UUID、状态、扩展数据)
+    ↓ node_to_plr_dict (转为 PLR 字典格式)
+    ↓ find_subclass(type_name, PLRResource) (查找 PLR 子类)
+    ↓ sub_cls.deserialize(plr_dict) (反序列化)
+    ↓ loop_set_uuid, loop_set_extra (递归设置 UUID 和扩展)
+PLR Resource
+```
+
+### Bottle 序列化
+
+```python
+class Bottle(Well):
+    def serialize(self) -> dict:
+        data = super().serialize()
+        return {**data, "diameter": self.diameter, "height": self.height}
+
+    @classmethod
+    def deserialize(cls, data: dict, allow_marshal=False):
+        barcode_data = data.pop("barcode", None)
+        instance = super().deserialize(data, allow_marshal=allow_marshal)
+        if barcode_data and isinstance(barcode_data, str):
+            instance.barcode = barcode_data
+        return instance
+```
+
+---
+
+## 3. Bioyond 物料同步
+
+### 双向转换函数
+
+| 函数 | 位置 | 方向 |
+|------|------|------|
+| `resource_bioyond_to_plr(materials, type_mapping, deck)` | `graphio.py` | Bioyond → PLR |
+| `resource_plr_to_bioyond(resources, type_mapping, warehouse_mapping)` | `graphio.py` | PLR → Bioyond |
+
+### `resource_bioyond_to_plr` 流程
+
+```
+Bioyond 物料列表
+    ↓ reverse_type_mapping: {typeName → (model, UUID)}
+    ↓ 对每个物料:
+       typeName → 查映射 → model (如 "BIOYOND_PolymerStation_Reactor")
+       initialize_resource({"name": unique_name, "class": model})
+    ↓ 设置 unilabos_extra (material_bioyond_id, material_bioyond_name 等)
+    ↓ 处理 detail (子物料/坐标)
+    ↓ 按 locationName 放入 deck.warehouses 对应槽位
+PLR 资源列表
+```
+
+### `resource_plr_to_bioyond` 流程
+
+```
+PLR 资源列表
+    ↓ 遍历每个资源:
+       载架(capacity > 1): 生成 details 子物料 + 坐标
+       单瓶: 直接映射
+    ↓ type_mapping 查找 typeId
+    ↓ warehouse_mapping 查找位置 UUID
+    ↓ 组装 Bioyond 格式 (name, typeName, typeId, quantity, Parameters, locations)
+Bioyond 物料列表
+```
+
+### BioyondResourceSynchronizer
+
+工作站通过 `ResourceSynchronizer` 自动同步物料：
+
+```python
+class BioyondResourceSynchronizer(ResourceSynchronizer):
+    def sync_from_external(self) -> bool:
+        all_data = []
+        all_data.extend(api_client.stock_material('{"typeMode": 0}'))  # 耗材
+        all_data.extend(api_client.stock_material('{"typeMode": 1}'))  # 样品
+        all_data.extend(api_client.stock_material('{"typeMode": 2}'))  # 试剂
+        unilab_resources = resource_bioyond_to_plr(
+            all_data,
+            type_mapping=self.workstation.bioyond_config["material_type_mappings"],
+            deck=self.workstation.deck
+        )
+        # 更新 deck 上的资源
+```
+
+---
+
+## 4. 非瓶类资源
+
+### ElectrodeSheet（极片）
+
+路径：`unilabos/resources/battery/electrode_sheet.py`
+
+```python
+class ElectrodeSheet(ResourcePLR):
+    """片状材料（极片、隔膜、弹片、垫片等）"""
+    _unilabos_state = {
+        "diameter": 0.0,
+        "thickness": 0.0,
+        "mass": 0.0,
+        "material_type": "",
+        "color": "",
+        "info": "",
+    }
+```
+
+工厂函数：`PositiveCan`, `PositiveElectrode`, `NegativeCan`, `NegativeElectrode`, `SpringWasher`, `FlatWasher`, `AluminumFoil`
+
+### Battery（电池）
+
+```python
+class Battery(Container):
+    """组装好的电池"""
+    _unilabos_state = {
+        "color": "",
+        "electrolyte_name": "",
+        "open_circuit_voltage": 0.0,
+    }
+```
+
+### Magazine / MagazineHolder（子弹夹）
+
+```python
+class Magazine(ResourceStack):
+    """子弹夹洞位，可堆叠 ElectrodeSheet"""
+    # direction, max_sheets
+
+class MagazineHolder(ItemizedResource):
+    """多洞位子弹夹"""
+    # hole_diameter, hole_depth, max_sheets_per_hole
+```
+
+工厂函数 `magazine_factory()` 用 `create_homogeneous_resources` 生成洞位，可选预填 `ElectrodeSheet` 或 `Battery`。
+
+---
+
+## 5. 仓库工厂模式参考
+
+### 实际 warehouse 工厂函数示例
+
+```python
+# 行优先 4x4 仓库
+def bioyond_warehouse_1x4x4(name: str) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=4, num_items_y=4, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=147.0, item_dy=106.0, item_dz=130.0,
+        layout="row-major",  # A01,A02,A03,A04, B01,...
+    )
+
+# 右侧 4x4 仓库（列名偏移）
+def bioyond_warehouse_1x4x4_right(name: str) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=4, num_items_y=4, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=147.0, item_dy=106.0, item_dz=130.0,
+        col_offset=4,      # A05,A06,A07,A08
+        layout="row-major",
+    )
+
+# 竖向仓库（站内试剂存放）
+def bioyond_warehouse_reagent_storage(name: str) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=1, num_items_y=2, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=147.0, item_dy=106.0, item_dz=130.0,
+        layout="vertical-col-major",
+    )
+
+# 行偏移（F 行开始）
+def bioyond_warehouse_5x3x1(name: str, row_offset: int = 0) -> WareHouse:
+    return warehouse_factory(
+        name=name,
+        num_items_x=3, num_items_y=5, num_items_z=1,
+        dx=10.0, dy=10.0, dz=10.0,
+        item_dx=159.0, item_dy=183.0, item_dz=130.0,
+        row_offset=row_offset,  # 0→A行起，5→F行起
+        layout="row-major",
+    )
+```
+
+### layout 类型说明
+
+| layout | 命名顺序 | 适用场景 |
+|--------|---------|---------|
+| `col-major` (默认) | A01,B01,C01,D01, A02,B02,... | 列优先，标准堆栈 |
+| `row-major` | A01,A02,A03,A04, B01,B02,... | 行优先，Bioyond 前端展示 |
+| `vertical-col-major` | 竖向排列，标签从底部开始 | 竖向仓库（试剂存放、测密度） |
+
+---
+
+## 6. 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| Bottle/Carrier 基类 | `unilabos/resources/itemized_carrier.py` |
+| WareHouse 类 + 工厂 | `unilabos/resources/warehouse.py` |
+| ResourceTreeSet 转换 | `unilabos/resources/resource_tracker.py` |
+| Bioyond 物料转换 | `unilabos/resources/graphio.py` |
+| Bioyond 仓库定义 | `unilabos/resources/bioyond/warehouses.py` |
+| 电池资源 | `unilabos/resources/battery/` |
+| PLR 注册 | `unilabos/resources/plr_additional_res_reg.py` |

.cursor/skills/add-workstation/SKILL.md

@@ -0,0 +1,500 @@
+---
+name: add-workstation
+description: Guide for adding new workstations to Uni-Lab-OS (接入新工作站). Walks through workstation type selection, sub-device composition, external system integration, driver creation, registry YAML, deck setup, and graph file configuration. Use when the user wants to add/integrate a new workstation, create a workstation driver, configure a station with sub-devices, set up deck and materials, or mentions 工作站/工站/station/workstation.
+---
+
+# Uni-Lab-OS 工作站接入指南
+
+工作站（workstation）是组合多个子设备的大型设备，拥有独立的物料管理系统（PLR Deck）和工作流引擎。本指南覆盖从需求分析到验证的全流程。
+
+> **前置知识**：工作站接入基于 `docs/ai_guides/add_device.md` 的通用设备接入框架，但有显著差异。阅读本指南前无需先读通用指南。
+
+## 第一步：确定工作站类型
+
+向用户确认以下信息：
+
+**Q1: 工作站的业务场景？**
+
+| 类型 | 基类 | 适用场景 | 示例 |
+|------|------|----------|------|
+| **Protocol 工作站** | `ProtocolNode` | 标准化学操作协议（过滤、转移、加热等） | FilterProtocolStation |
+| **外部系统工作站** | `WorkstationBase` | 与外部 LIMS/MES 系统对接，有专属 API | BioyondStation |
+| **硬件控制工作站** | `WorkstationBase` | 直接控制 PLC/硬件，无外部系统 | CoinCellAssembly |
+
+**Q2: 工作站英文名称？**（如 `my_reaction_station`）
+
+**Q3: 与外部系统的交互方式？**
+
+| 方式 | 适用场景 | 需要的配置 |
+|------|----------|-----------|
+| 无外部系统 | Protocol 工作站、纯硬件控制 | 无 |
+| HTTP API | LIMS/MES 系统（如 Bioyond） | `api_host`, `api_key` |
+| Modbus TCP | PLC 控制 | `address`, `port` |
+| OPC UA | 工业设备 | `url` |
+
+**Q4: 子设备组成？**
+- 列出所有子设备（如反应器、泵、阀、传感器等）
+- 哪些是已有设备类型？哪些需要新增？
+- 子设备之间的硬件代理关系（如泵通过串口设备通信）
+
+**Q5: 物料管理需求？**
+- 是否需要 Deck（物料面板）？
+- 物料类型（plate、tip_rack、bottle 等）
+- 是否需要与外部物料系统同步？
+
+---
+
+## 第二步：理解工作站架构
+
+工作站与普通设备的核心差异：
+
+| 维度 | 普通设备 | 工作站 |
+|------|---------|--------|
+| 基类 | 无（纯 Python 类） | `WorkstationBase` 或 `ProtocolNode` |
+| ROS 节点 | `BaseROS2DeviceNode` | `ROS2WorkstationNode` |
+| 状态管理 | `self.data` 字典 | 通常不用 `self.data`，用 `@property` 直接访问 |
+| 子设备 | 无 | `children` 列表，通过 `self._children` 访问 |
+| 物料 | 无 | `self.deck`（PLR Deck） |
+| 图文件角色 | `parent: null` 或 `parent: "<station>"` | `parent: null`，含 `children` 和 `deck` |
+
+### 继承体系
+
+`WorkstationBase` (ABC) → `ProtocolNode` (通用协议) / `BioyondWorkstation` (→ ReactionStation, DispensingStation) / `CoinCellAssemblyWorkstation` (硬件控制)
+
+### ROS 层
+
+`ROS2WorkstationNode` 额外负责：初始化 children 子设备节点、为子设备创建 ActionClient、配置硬件代理、为 protocol_type 创建协议 ActionServer。
+
+---
+
+## 第三步：创建驱动文件
+
+文件路径：`unilabos/devices/workstation/<station_name>/<station_name>.py`
+
+### 模板 A：基于外部系统的工作站
+
+适用于与 LIMS/MES 等外部系统对接的场景。
+
+```python
+import logging
+from typing import Dict, Any, Optional, List
+from pylabrobot.resources import Deck
+
+from unilabos.devices.workstation.workstation_base import WorkstationBase
+
+try:
+    from unilabos.ros.nodes.presets.workstation import ROS2WorkstationNode
+except ImportError:
+    ROS2WorkstationNode = None
+
+
+class MyWorkstation(WorkstationBase):
+    """工作站描述"""
+
+    _ros_node: "ROS2WorkstationNode"
+
+    def __init__(
+        self,
+        config: dict = None,
+        deck: Optional[Deck] = None,
+        protocol_type: list = None,
+        **kwargs,
+    ):
+        super().__init__(deck=deck, **kwargs)
+        self.config = config or {}
+        self.logger = logging.getLogger(f"MyWorkstation")
+
+        # 外部系统连接配置
+        self.api_host = self.config.get("api_host", "")
+        self.api_key = self.config.get("api_key", "")
+
+        # 工作站业务状态（不同于 self.data 模式）
+        self._status = "Idle"
+
+    def post_init(self, ros_node: "ROS2WorkstationNode") -> None:
+        super().post_init(ros_node)
+        # 在这里启动后台服务、连接监控等
+
+    # ============ 子设备访问 ============
+
+    def _get_child_device(self, device_id: str):
+        """通过 ID 获取子设备节点"""
+        return self._children.get(device_id)
+
+    # ============ 动作方法 ============
+
+    async def scheduler_start(self, **kwargs) -> Dict[str, Any]:
+        """启动调度器"""
+        return {"success": True}
+
+    async def create_order(self, json_str: str, **kwargs) -> Dict[str, Any]:
+        """创建工单"""
+        return {"success": True}
+
+    # ============ 属性 ============
+
+    @property
+    def workflow_sequence(self) -> str:
+        return "[]"
+
+    @property
+    def material_info(self) -> str:
+        return "{}"
+```
+
+### 模板 B：基于硬件控制的工作站
+
+适用于直接与 PLC/硬件通信的场景。
+
+```python
+import logging
+from typing import Dict, Any, Optional
+from pylabrobot.resources import Deck
+
+from unilabos.devices.workstation.workstation_base import WorkstationBase
+
+try:
+    from unilabos.ros.nodes.presets.workstation import ROS2WorkstationNode
+except ImportError:
+    ROS2WorkstationNode = None
+
+
+class MyHardwareWorkstation(WorkstationBase):
+    """硬件控制工作站"""
+
+    _ros_node: "ROS2WorkstationNode"
+
+    def __init__(
+        self,
+        config: dict = None,
+        deck: Optional[Deck] = None,
+        address: str = "192.168.1.100",
+        port: str = "502",
+        debug_mode: bool = False,
+        *args,
+        **kwargs,
+    ):
+        super().__init__(deck=deck, *args, **kwargs)
+        self.config = config or {}
+        self.address = address
+        self.port = int(port)
+        self.debug_mode = debug_mode
+        self.logger = logging.getLogger("MyHardwareWorkstation")
+
+        # 初始化通信客户端
+        if not debug_mode:
+            from unilabos.device_comms.modbus_plc.client import ModbusTcpClient
+            self.client = ModbusTcpClient(host=self.address, port=self.port)
+        else:
+            self.client = None
+
+    def post_init(self, ros_node: "ROS2WorkstationNode") -> None:
+        super().post_init(ros_node)
+
+    # ============ 硬件读写 ============
+
+    def _read_register(self, name: str):
+        """读取 Modbus 寄存器"""
+        if self.debug_mode:
+            return 0
+        # 实际读取逻辑
+        pass
+
+    # ============ 动作方法 ============
+
+    async def start_process(self, **kwargs) -> Dict[str, Any]:
+        """启动加工流程"""
+        return {"success": True}
+
+    async def stop_process(self, **kwargs) -> Dict[str, Any]:
+        """停止加工流程"""
+        return {"success": True}
+
+    # ============ 属性（从硬件实时读取）============
+
+    @property
+    def sys_status(self) -> str:
+        return str(self._read_register("SYS_STATUS"))
+```
+
+### 模板 C：Protocol 工作站
+
+适用于标准化学操作协议的场景，直接使用 `ProtocolNode`。
+
+```python
+from typing import List, Optional
+from pylabrobot.resources import Resource as PLRResource
+
+from unilabos.devices.workstation.workstation_base import ProtocolNode
+
+
+class MyProtocolStation(ProtocolNode):
+    """Protocol 工作站 — 使用标准化学操作协议"""
+
+    def __init__(
+        self,
+        protocol_type: List[str],
+        deck: Optional[PLRResource] = None,
+        *args,
+        **kwargs,
+    ):
+        super().__init__(protocol_type=protocol_type, deck=deck, *args, **kwargs)
+```
+
+> Protocol 工作站通常不需要自定义驱动类，直接使用 `ProtocolNode` 并在注册表和图文件中配置 `protocol_type` 即可。
+
+---
+
+## 第四步：创建子设备驱动（如需要）
+
+工作站的子设备本身是独立设备。按 `docs/ai_guides/add_device.md` 的标准流程创建。
+
+子设备的关键约束：
+- 在图文件中 `parent` 指向工作站 ID
+- 图文件中在工作站的 `children` 数组里列出
+- 如需硬件代理，在子设备的 `config.hardware_interface.name` 指向通信设备 ID
+
+---
+
+## 第五步：创建注册表 YAML
+
+路径：`unilabos/registry/devices/<station_name>.yaml`
+
+### 最小配置
+
+```yaml
+my_workstation:
+  category:
+    - workstation
+  class:
+    module: unilabos.devices.workstation.my_station.my_station:MyWorkstation
+    type: python
+```
+
+启动时 `--complete_registry` 自动补全 `status_types` 和 `action_value_mappings`。
+
+### 完整配置参考
+
+```yaml
+my_workstation:
+  description: "我的工作站"
+  version: "1.0.0"
+  category:
+    - workstation
+    - my_category
+  class:
+    module: unilabos.devices.workstation.my_station.my_station:MyWorkstation
+    type: python
+    status_types:
+      workflow_sequence: String
+      material_info: String
+    action_value_mappings:
+      scheduler_start:
+        type: UniLabJsonCommandAsync
+        goal: {}
+        result:
+          success: success
+      create_order:
+        type: UniLabJsonCommandAsync
+        goal:
+          json_str: json_str
+        result:
+          success: success
+  init_param_schema:
+    config:
+      type: object
+    deck:
+      type: object
+    protocol_type:
+      type: array
+```
+
+### 子设备注册表
+
+子设备有独立的注册表文件，需要在 `category` 中包含工作站标识：
+
+```yaml
+my_reactor:
+  category:
+    - reactor
+    - my_workstation
+  class:
+    module: unilabos.devices.workstation.my_station.my_reactor:MyReactor
+    type: python
+```
+
+---
+
+## 第六步：配置 Deck 资源（如需要）
+
+如果工作站有物料管理需求，需要定义 Deck 类。
+
+### 使用已有 Deck 类
+
+查看 `unilabos/resources/` 目录下是否有适用的 Deck 类。
+
+### 创建自定义 Deck
+
+在 `unilabos/resources/<category>/decks.py` 中定义：
+
+```python
+from pylabrobot.resources import Deck
+from pylabrobot.resources.coordinate import Coordinate
+
+
+def MyStation_Deck(name: str = "MyStation_Deck") -> Deck:
+    deck = Deck(name=name, size_x=2700.0, size_y=1080.0, size_z=1500.0)
+    # 在 deck 上定义子资源位置（carrier、plate 等）
+    return deck
+```
+
+在 `unilabos/resources/<category>/` 下注册或通过注册表引用。
+
+---
+
+## 第七步：配置图文件
+
+图文件路径：`unilabos/test/experiments/<station_name>.json`
+
+### 完整结构
+
+```json
+{
+    "nodes": [
+        {
+            "id": "my_station",
+            "name": "my_station",
+            "children": ["my_deck", "sub_device_1", "sub_device_2"],
+            "parent": null,
+            "type": "device",
+            "class": "my_workstation",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {
+                "api_host": "http://192.168.1.100:8080",
+                "api_key": "YOUR_KEY"
+            },
+            "deck": {
+                "data": {
+                    "_resource_child_name": "my_deck",
+                    "_resource_type": "unilabos.resources.my_module.decks:MyStation_Deck"
+                }
+            },
+            "size_x": 2700.0,
+            "size_y": 1080.0,
+            "size_z": 1500.0,
+            "protocol_type": [],
+            "data": {}
+        },
+        {
+            "id": "my_deck",
+            "name": "my_deck",
+            "children": [],
+            "parent": "my_station",
+            "type": "deck",
+            "class": "MyStation_Deck",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {
+                "type": "MyStation_Deck",
+                "setup": true,
+                "rotation": {"x": 0, "y": 0, "z": 0, "type": "Rotation"}
+            },
+            "data": {}
+        },
+        {
+            "id": "sub_device_1",
+            "name": "sub_device_1",
+            "children": [],
+            "parent": "my_station",
+            "type": "device",
+            "class": "sub_device_registry_name",
+            "position": {"x": 100, "y": 0, "z": 0},
+            "config": {},
+            "data": {}
+        }
+    ]
+}
+```
+
+### 图文件规则
+
+| 字段 | 说明 |
+|------|------|
+| `id` | 节点唯一标识，与 `children` 数组中的引用一致 |
+| `children` | 包含 deck ID 和所有子设备 ID |
+| `parent` | 工作站节点为 `null`；子设备/deck 指向工作站 ID |
+| `type` | 工作站和子设备为 `"device"`；deck 为 `"deck"` |
+| `class` | 对应注册表中的设备名 |
+| `deck.data._resource_child_name` | 必须与 deck 节点的 `id` 一致 |
+| `deck.data._resource_type` | Deck 工厂函数的完整 Python 路径 |
+| `protocol_type` | Protocol 工作站填入协议名列表；否则为 `[]` |
+| `config` | 传入驱动 `__init__` 的 `config` 参数 |
+
+---
+
+## 第八步：验证
+
+```bash
+# 1. 模块可导入
+python -c "from unilabos.devices.workstation.<name>.<name> import <ClassName>"
+
+# 2. 注册表补全
+unilab -g <graph>.json --complete_registry
+
+# 3. 启动测试
+unilab -g <graph>.json
+```
+
+---
+
+## 高级模式
+
+实现外部系统对接型工作站时，详见 [reference.md](reference.md)：RPC 客户端、HTTP 回调服务、连接监控、Config 结构模式（material_type_mappings / warehouse_mapping / workflow_mappings）、ResourceSynchronizer、update_resource、工作流序列、站间物料转移、post_init 完整模式。
+
+---
+
+## 关键规则
+
+1. **`__init__` 必须接受 `deck` 和 `**kwargs`** — `WorkstationBase.__init__` 需要 `deck` 参数
+2. **通过 `self._children` 访问子设备** — 不要自行维护子设备引用
+3. **`post_init` 中启动后台服务** — 不要在 `__init__` 中启动网络连接
+4. **异步方法使用 `await self._ros_node.sleep()`** — 禁止 `time.sleep()` 和 `asyncio.sleep()`
+5. **子设备在图文件中声明** — 不在驱动代码中创建子设备实例
+6. **`deck` 配置中的 `_resource_child_name` 必须与 deck 节点 ID 一致**
+7. **Protocol 工作站优先使用 `ProtocolNode`** — 不需要自定义类
+
+---
+
+## 工作流清单
+
+```
+工作站接入进度：
+- [ ] 1. 确定工作站类型（Protocol / 外部系统 / 硬件控制）
+- [ ] 2. 确认子设备组成和物料需求
+- [ ] 3. 创建工作站驱动 unilabos/devices/workstation/<name>/<name>.py
+- [ ] 4. 创建子设备驱动（如需要，按 add_device.md 流程）
+- [ ] 5. 创建注册表 unilabos/registry/devices/<name>.yaml
+- [ ] 6. 创建/选择 Deck 资源类（如需要）
+- [ ] 7. 配置图文件 unilabos/test/experiments/<name>.json
+- [ ] 8. 验证：可导入 + 注册表补全 + 启动测试
+```
+
+---
+
+## 现有工作站参考
+
+| 工作站 | 注册表名 | 驱动类 | 类型 |
+|--------|----------|--------|------|
+| Protocol 通用 | `workstation` | `ProtocolNode` | Protocol |
+| Bioyond 反应站 | `reaction_station.bioyond` | `BioyondReactionStation` | 外部系统 |
+| Bioyond 配液站 | `bioyond_dispensing_station` | `BioyondDispensingStation` | 外部系统 |
+| 纽扣电池组装 | `coincellassemblyworkstation_device` | `CoinCellAssemblyWorkstation` | 硬件控制 |
+
+### 参考文件路径
+
+- 基类: `unilabos/devices/workstation/workstation_base.py`
+- Bioyond 基类: `unilabos/devices/workstation/bioyond_studio/station.py`
+- 反应站: `unilabos/devices/workstation/bioyond_studio/reaction_station/reaction_station.py`
+- 配液站: `unilabos/devices/workstation/bioyond_studio/dispensing_station/dispensing_station.py`
+- 纽扣电池: `unilabos/devices/workstation/coin_cell_assembly/coin_cell_assembly.py`
+- ROS 节点: `unilabos/ros/nodes/presets/workstation.py`
+- 图文件: `unilabos/test/experiments/reaction_station_bioyond.json`, `dispensing_station_bioyond.json`

.cursor/skills/add-workstation/reference.md

@@ -0,0 +1,371 @@
+# 工作站高级模式参考
+
+本文件是 SKILL.md 的补充，包含外部系统集成、物料同步、配置结构等高级模式。
+Agent 在需要实现这些功能时按需阅读。
+
+---
+
+## 1. 外部系统集成模式
+
+### 1.1 RPC 客户端
+
+与外部 LIMS/MES 系统通信的标准模式。继承 `BaseRequest`，所有接口统一用 POST。
+
+```python
+from unilabos.device_comms.rpc import BaseRequest
+
+
+class MySystemRPC(BaseRequest):
+    """外部系统 RPC 客户端"""
+
+    def __init__(self, host: str, api_key: str):
+        super().__init__(host)
+        self.api_key = api_key
+
+    def _request(self, endpoint: str, data: dict = None) -> dict:
+        return self.post(
+            url=f"{self.host}/api/{endpoint}",
+            params={
+                "apiKey": self.api_key,
+                "requestTime": self.get_current_time_iso8601(),
+                "data": data or {},
+            },
+        )
+
+    def query_status(self) -> dict:
+        return self._request("status/query")
+
+    def create_order(self, order_data: dict) -> dict:
+        return self._request("order/create", order_data)
+```
+
+参考：`unilabos/devices/workstation/bioyond_studio/bioyond_rpc.py`（`BioyondV1RPC`）
+
+### 1.2 HTTP 回调服务
+
+接收外部系统报送的标准模式。使用 `WorkstationHTTPService`，在 `post_init` 中启动。
+
+```python
+from unilabos.devices.workstation.workstation_http_service import WorkstationHTTPService
+
+
+class MyWorkstation(WorkstationBase):
+    def __init__(self, config=None, deck=None, **kwargs):
+        super().__init__(deck=deck, **kwargs)
+        self.config = config or {}
+        http_cfg = self.config.get("http_service_config", {})
+        self._http_service_config = {
+            "host": http_cfg.get("http_service_host", "127.0.0.1"),
+            "port": http_cfg.get("http_service_port", 8080),
+        }
+        self.http_service = None
+
+    def post_init(self, ros_node):
+        super().post_init(ros_node)
+        self.http_service = WorkstationHTTPService(
+            workstation_instance=self,
+            host=self._http_service_config["host"],
+            port=self._http_service_config["port"],
+        )
+        self.http_service.start()
+```
+
+**HTTP 服务路由**（固定端点，由 `WorkstationHTTPHandler` 自动分发）：
+
+| 端点 | 调用的工作站方法 |
+|------|-----------------|
+| `/report/step_finish` | `process_step_finish_report(report_request)` |
+| `/report/sample_finish` | `process_sample_finish_report(report_request)` |
+| `/report/order_finish` | `process_order_finish_report(report_request, used_materials)` |
+| `/report/material_change` | `process_material_change_report(report_data)` |
+| `/report/error_handling` | `handle_external_error(error_data)` |
+
+实现对应方法即可接收回调：
+
+```python
+def process_step_finish_report(self, report_request) -> Dict[str, Any]:
+    """处理步骤完成报告"""
+    step_name = report_request.data.get("stepName")
+    return {"success": True, "message": f"步骤 {step_name} 已处理"}
+
+def process_order_finish_report(self, report_request, used_materials) -> Dict[str, Any]:
+    """处理订单完成报告"""
+    order_code = report_request.data.get("orderCode")
+    return {"success": True}
+```
+
+参考：`unilabos/devices/workstation/workstation_http_service.py`
+
+### 1.3 连接监控
+
+独立线程周期性检测外部系统连接状态，状态变化时发布 ROS 事件。
+
+```python
+class ConnectionMonitor:
+    def __init__(self, workstation, check_interval=30):
+        self.workstation = workstation
+        self.check_interval = check_interval
+        self._running = False
+        self._thread = None
+
+    def start(self):
+        self._running = True
+        self._thread = threading.Thread(target=self._monitor_loop, daemon=True)
+        self._thread.start()
+
+    def _monitor_loop(self):
+        while self._running:
+            try:
+                # 调用外部系统接口检测连接
+                self.workstation.hardware_interface.ping()
+                status = "online"
+            except Exception:
+                status = "offline"
+            time.sleep(self.check_interval)
+```
+
+参考：`unilabos/devices/workstation/bioyond_studio/station.py`（`ConnectionMonitor`）
+
+---
+
+## 2. Config 结构模式
+
+工作站的 `config` 在图文件中定义，传入 `__init__`。以下是常见字段模式：
+
+### 2.1 外部系统连接
+
+```json
+{
+    "api_host": "http://192.168.1.100:8080",
+    "api_key": "YOUR_API_KEY"
+}
+```
+
+### 2.2 HTTP 回调服务
+
+```json
+{
+    "http_service_config": {
+        "http_service_host": "127.0.0.1",
+        "http_service_port": 8080
+    }
+}
+```
+
+### 2.3 物料类型映射
+
+将 PLR 资源类名映射到外部系统的物料类型（名称 + UUID）。用于双向物料转换。
+
+```json
+{
+    "material_type_mappings": {
+        "PLR_ResourceClassName": ["外部系统显示名", "external-type-uuid"],
+        "BIOYOND_PolymerStation_Reactor": ["反应器", "3a14233b-902d-0d7b-..."]
+    }
+}
+```
+
+### 2.4 仓库映射
+
+将仓库名映射到外部系统的仓库 UUID 和库位 UUID。用于入库/出库操作。
+
+```json
+{
+    "warehouse_mapping": {
+        "仓库名": {
+            "uuid": "warehouse-uuid",
+            "site_uuids": {
+                "A01": "site-uuid-A01",
+                "A02": "site-uuid-A02"
+            }
+        }
+    }
+}
+```
+
+### 2.5 工作流映射
+
+将内部工作流名映射到外部系统的工作流 ID。
+
+```json
+{
+    "workflow_mappings": {
+        "internal_workflow_name": "external-workflow-uuid"
+    }
+}
+```
+
+### 2.6 物料默认参数
+
+```json
+{
+    "material_default_parameters": {
+        "NMP": {
+            "unit": "毫升",
+            "density": "1.03",
+            "densityUnit": "g/mL",
+            "description": "N-甲基吡咯烷酮"
+        }
+    }
+}
+```
+
+---
+
+## 3. 资源同步机制
+
+### 3.1 ResourceSynchronizer
+
+抽象基类，用于与外部物料系统双向同步。定义在 `workstation_base.py`。
+
+```python
+from unilabos.devices.workstation.workstation_base import ResourceSynchronizer
+
+
+class MyResourceSynchronizer(ResourceSynchronizer):
+    def __init__(self, workstation, api_client):
+        super().__init__(workstation)
+        self.api_client = api_client
+
+    def sync_from_external(self) -> bool:
+        """从外部系统拉取物料到 deck"""
+        external_materials = self.api_client.list_materials()
+        for material in external_materials:
+            plr_resource = self._convert_to_plr(material)
+            self.workstation.deck.assign_child_resource(plr_resource, coordinate)
+        return True
+
+    def sync_to_external(self, plr_resource) -> bool:
+        """将 deck 中的物料变更推送到外部系统"""
+        external_data = self._convert_from_plr(plr_resource)
+        self.api_client.update_material(external_data)
+        return True
+
+    def handle_external_change(self, change_info) -> bool:
+        """处理外部系统推送的物料变更"""
+        return True
+```
+
+### 3.2 update_resource — 上传资源树到云端
+
+将 PLR Deck 序列化后通过 ROS 服务上传。典型使用场景：
+
+```python
+# 在 post_init 中上传初始 deck
+from unilabos.ros.nodes.base_device_node import ROS2DeviceNode
+
+ROS2DeviceNode.run_async_func(
+    self._ros_node.update_resource, True,
+    **{"resources": [self.deck]}
+)
+
+# 在动作方法中更新特定资源
+ROS2DeviceNode.run_async_func(
+    self._ros_node.update_resource, True,
+    **{"resources": [updated_plate]}
+)
+```
+
+---
+
+## 4. 工作流序列管理
+
+工作站通过 `workflow_sequence` 属性管理任务队列（JSON 字符串形式）。
+
+```python
+class MyWorkstation(WorkstationBase):
+    def __init__(self, **kwargs):
+        super().__init__(**kwargs)
+        self._workflow_sequence = []
+
+    @property
+    def workflow_sequence(self) -> str:
+        """返回 JSON 字符串，ROS 自动发布"""
+        import json
+        return json.dumps(self._workflow_sequence)
+
+    async def append_to_workflow_sequence(self, workflow_name: str) -> Dict[str, Any]:
+        """添加工作流到队列"""
+        self._workflow_sequence.append({
+            "name": workflow_name,
+            "status": "pending",
+            "created_at": time.time(),
+        })
+        return {"success": True}
+
+    async def clear_workflows(self) -> Dict[str, Any]:
+        """清空工作流队列"""
+        self._workflow_sequence = []
+        return {"success": True}
+```
+
+---
+
+## 5. 站间物料转移
+
+工作站之间转移物料的模式。通过 ROS ActionClient 调用目标站的动作。
+
+```python
+async def transfer_materials_to_another_station(
+    self,
+    target_device_id: str,
+    transfer_groups: list,
+    **kwargs,
+) -> Dict[str, Any]:
+    """将物料转移到另一个工作站"""
+    target_node = self._children.get(target_device_id)
+    if not target_node:
+        # 通过 ROS 节点查找非子设备的目标站
+        pass
+
+    for group in transfer_groups:
+        resource = self.find_resource_by_name(group["resource_name"])
+        # 从本站 deck 移除
+        resource.unassign()
+        # 调用目标站的接收方法
+        # ...
+
+    return {"success": True, "transferred": len(transfer_groups)}
+```
+
+参考：`BioyondDispensingStation.transfer_materials_to_reaction_station`
+
+---
+
+## 6. post_init 完整模式
+
+`post_init` 是工作站初始化的关键阶段，此时 ROS 节点和子设备已就绪。
+
+```python
+def post_init(self, ros_node):
+    super().post_init(ros_node)
+
+    # 1. 初始化外部系统客户端（此时 config 已可用）
+    self.rpc_client = MySystemRPC(
+        host=self.config.get("api_host"),
+        api_key=self.config.get("api_key"),
+    )
+    self.hardware_interface = self.rpc_client
+
+    # 2. 启动连接监控
+    self.connection_monitor = ConnectionMonitor(self)
+    self.connection_monitor.start()
+
+    # 3. 启动 HTTP 回调服务
+    if hasattr(self, '_http_service_config'):
+        self.http_service = WorkstationHTTPService(
+            workstation_instance=self,
+            host=self._http_service_config["host"],
+            port=self._http_service_config["port"],
+        )
+        self.http_service.start()
+
+    # 4. 上传 deck 到云端
+    ROS2DeviceNode.run_async_func(
+        self._ros_node.update_resource, True,
+        **{"resources": [self.deck]}
+    )
+
+    # 5. 初始化资源同步器（可选）
+    self.resource_synchronizer = MyResourceSynchronizer(self, self.rpc_client)
+```

.cursor/skills/edit-experiment-graph/SKILL.md

@@ -0,0 +1,381 @@
+---
+name: edit-experiment-graph
+description: Guide for creating and editing experiment graph files in Uni-Lab-OS (创建/编辑实验组态图). Covers node types, link types, parent-child relationships, deck configuration, and common graph patterns. Use when the user wants to create a graph file, edit an experiment configuration, set up device topology, or mentions 图文件/graph/组态/拓扑/实验图/experiment JSON.
+---
+
+# 创建/编辑实验组态图
+
+实验图（Graph File）定义设备拓扑、物理连接和物料配置。系统启动时加载图文件，初始化所有设备和连接关系。
+
+路径：`unilabos/test/experiments/<name>.json`
+
+---
+
+## 第一步：确认需求
+
+向用户确认：
+
+| 信息 | 说明 |
+|------|------|
+| 场景类型 | 单设备调试 / 多设备联调 / 工作站完整图 |
+| 包含的设备 | 设备 ID、注册表 class 名、配置参数 |
+| 连接关系 | 物理连接（管道）/ 通信连接（串口）/ 无连接 |
+| 父子关系 | 是否有工作站包含子设备 |
+| 物料需求 | 是否需要 Deck、容器、试剂瓶 |
+
+---
+
+## 第二步：JSON 顶层结构
+
+```json
+{
+    "nodes": [],
+    "links": []
+}
+```
+
+> `links` 也可写作 `edges`，加载时两者等效。
+
+---
+
+## 第三步：定义 Nodes
+
+### 节点字段
+
+| 字段 | 类型 | 必需 | 默认值 | 说明 |
+|------|------|------|--------|------|
+| `id` | string | **是** | — | 节点唯一标识，links 和 children 中引用此值 |
+| `class` | string | **是** | — | 对应注册表名（设备/资源 YAML 的 key），容器可为 `null` |
+| `name` | string | 否 | 同 `id` | 显示名称，缺省时自动用 `id` |
+| `type` | string | 否 | `"device"` | 节点类型（见下表），缺省时自动设为 `"device"` |
+| `children` | string[] | 否 | `[]` | 子节点 ID 列表 |
+| `parent` | string\|null | 否 | `null` | 父节点 ID，顶层设备为 `null` |
+| `position` | object | 否 | `{x:0,y:0,z:0}` | 空间坐标 |
+| `config` | object | 否 | `{}` | 传给驱动 `__init__` 的参数 |
+| `data` | object | 否 | `{}` | 初始运行状态 |
+| `size_x/y/z` | float | 否 | — | 节点物理尺寸（工作站节点常用） |
+
+> 非标准字段（如 `api_host`）会自动移入 `config`。
+
+### 节点类型
+
+| `type` | 用途 | `class` 要求 |
+|--------|------|-------------|
+| `device` | 设备（默认） | 注册表中的设备名 |
+| `deck` | 工作台面 | Deck 工厂函数/类名 |
+| `container` | 容器（烧瓶、反应釜） | `null` 或具体容器类名 |
+
+### 设备节点模板
+
+```json
+{
+    "id": "my_device",
+    "name": "我的设备",
+    "children": [],
+    "parent": null,
+    "type": "device",
+    "class": "registry_device_name",
+    "position": {"x": 0, "y": 0, "z": 0},
+    "config": {
+        "port": "/dev/ttyUSB0",
+        "baudrate": 115200
+    },
+    "data": {
+        "status": "Idle"
+    }
+}
+```
+
+### 容器节点模板
+
+容器用于协议系统中表示试剂瓶、反应釜等，`class` 通常为 `null`：
+
+```json
+{
+    "id": "flask_DMF",
+    "name": "DMF试剂瓶",
+    "children": [],
+    "parent": "my_station",
+    "type": "container",
+    "class": null,
+    "position": {"x": 200, "y": 500, "z": 0},
+    "config": {"max_volume": 1000.0},
+    "data": {
+        "liquid": [{"liquid_type": "DMF", "liquid_volume": 800.0}]
+    }
+}
+```
+
+### Deck 节点模板
+
+```json
+{
+    "id": "my_deck",
+    "name": "my_deck",
+    "children": [],
+    "parent": "my_station",
+    "type": "deck",
+    "class": "MyStation_Deck",
+    "position": {"x": 0, "y": 0, "z": 0},
+    "config": {
+        "type": "MyStation_Deck",
+        "setup": true,
+        "rotation": {"x": 0, "y": 0, "z": 0, "type": "Rotation"}
+    },
+    "data": {}
+}
+```
+
+---
+
+## 第四步：定义 Links
+
+### Link 字段
+
+| 字段 | 类型 | 说明 |
+|------|------|------|
+| `source` | string | 源节点 ID |
+| `target` | string | 目标节点 ID |
+| `type` | string | `"physical"` / `"fluid"` / `"communication"` |
+| `port` | object | 端口映射 `{source_id: "port_name", target_id: "port_name"}` |
+
+### 物理/流体连接
+
+设备间的管道连接，协议系统用此查找路径：
+
+```json
+{
+    "source": "multiway_valve_1",
+    "target": "flask_DMF",
+    "type": "fluid",
+    "port": {
+        "multiway_valve_1": "2",
+        "flask_DMF": "outlet"
+    }
+}
+```
+
+### 通信连接
+
+设备间的串口/IO 通信代理，加载时自动将端口信息写入目标设备 config：
+
+```json
+{
+    "source": "pump_1",
+    "target": "serial_device",
+    "type": "communication",
+    "port": {
+        "pump_1": "port",
+        "serial_device": "port"
+    }
+}
+```
+
+---
+
+## 第五步：父子关系与工作站配置
+
+### 工作站 + 子设备
+
+工作站节点的 `children` 列出所有子节点 ID，子节点的 `parent` 指向工作站：
+
+```json
+{
+    "id": "my_station",
+    "children": ["my_deck", "pump_1", "valve_1", "reactor_1"],
+    "parent": null,
+    "type": "device",
+    "class": "workstation",
+    "config": {
+        "protocol_type": ["PumpTransferProtocol", "CleanProtocol"]
+    }
+}
+```
+
+### 工作站 + Deck 引用
+
+工作站节点中通过 `deck` 字段引用 Deck：
+
+```json
+{
+    "id": "my_station",
+    "children": ["my_deck", "sub_device_1"],
+    "deck": {
+        "data": {
+            "_resource_child_name": "my_deck",
+            "_resource_type": "unilabos.resources.my_module.decks:MyDeck"
+        }
+    }
+}
+```
+
+**关键约束：**
+- `_resource_child_name` 必须与 Deck 节点的 `id` 一致
+- `_resource_type` 为 Deck 类/工厂函数的完整 Python 路径
+
+---
+
+## 常见图模式
+
+### 模式 A：单设备调试
+
+最简形式，一个设备节点，无连接：
+
+```json
+{
+    "nodes": [
+        {
+            "id": "my_device",
+            "name": "my_device",
+            "children": [],
+            "parent": null,
+            "type": "device",
+            "class": "motor.zdt_x42",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {"port": "/dev/ttyUSB0", "baudrate": 115200},
+            "data": {"status": "idle"}
+        }
+    ],
+    "links": []
+}
+```
+
+### 模式 B：Protocol 工作站（泵+阀+容器）
+
+工作站配合泵、阀、容器和物理连接，用于协议编译：
+
+```json
+{
+    "nodes": [
+        {
+            "id": "station", "name": "协议工作站",
+            "class": "workstation", "type": "device", "parent": null,
+            "children": ["pump", "valve", "flask_solvent", "reactor", "waste"],
+            "config": {"protocol_type": ["PumpTransferProtocol"]}
+        },
+        {"id": "pump", "name": "转移泵", "class": "virtual_transfer_pump",
+         "type": "device", "parent": "station",
+         "config": {"port": "VIRTUAL", "max_volume": 25.0},
+         "data": {"status": "Idle", "position": 0.0, "valve_position": "0"}},
+        {"id": "valve", "name": "多通阀", "class": "virtual_multiway_valve",
+         "type": "device", "parent": "station",
+         "config": {"port": "VIRTUAL", "positions": 8}},
+        {"id": "flask_solvent", "name": "溶剂瓶", "type": "container",
+         "class": null, "parent": "station",
+         "config": {"max_volume": 1000.0},
+         "data": {"liquid": [{"liquid_type": "DMF", "liquid_volume": 500}]}},
+        {"id": "reactor", "name": "反应器", "type": "container",
+         "class": null, "parent": "station"},
+        {"id": "waste", "name": "废液瓶", "type": "container",
+         "class": null, "parent": "station"}
+    ],
+    "links": [
+        {"source": "pump", "target": "valve", "type": "fluid",
+         "port": {"pump": "transferpump", "valve": "transferpump"}},
+        {"source": "valve", "target": "flask_solvent", "type": "fluid",
+         "port": {"valve": "1", "flask_solvent": "outlet"}},
+        {"source": "valve", "target": "reactor", "type": "fluid",
+         "port": {"valve": "2", "reactor": "inlet"}},
+        {"source": "valve", "target": "waste", "type": "fluid",
+         "port": {"valve": "3", "waste": "inlet"}}
+    ]
+}
+```
+
+### 模式 C：外部系统工作站 + Deck
+
+```json
+{
+    "nodes": [
+        {
+            "id": "bioyond_station", "class": "reaction_station.bioyond",
+            "parent": null, "children": ["bioyond_deck"],
+            "config": {
+                "api_host": "http://192.168.1.100:8080",
+                "api_key": "YOUR_KEY",
+                "material_type_mappings": {},
+                "warehouse_mapping": {}
+            },
+            "deck": {
+                "data": {
+                    "_resource_child_name": "bioyond_deck",
+                    "_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_PolymerReactionStation_Deck"
+                }
+            }
+        },
+        {
+            "id": "bioyond_deck", "class": "BIOYOND_PolymerReactionStation_Deck",
+            "parent": "bioyond_station", "type": "deck",
+            "config": {"type": "BIOYOND_PolymerReactionStation_Deck", "setup": true}
+        }
+    ],
+    "links": []
+}
+```
+
+### 模式 D：通信代理（串口设备）
+
+泵通过串口设备通信，使用 `communication` 类型的 link。加载时系统会自动将串口端口信息写入泵的 `config`：
+
+```json
+{
+    "nodes": [
+        {"id": "station", "name": "工作站", "type": "device",
+         "class": "workstation", "parent": null,
+         "children": ["serial_1", "pump_1"]},
+        {"id": "serial_1", "name": "串口", "type": "device",
+         "class": "serial", "parent": "station",
+         "config": {"port": "COM7", "baudrate": 9600}},
+        {"id": "pump_1", "name": "注射泵", "type": "device",
+         "class": "syringe_pump_with_valve.runze.SY03B-T08", "parent": "station"}
+    ],
+    "links": [
+        {"source": "pump_1", "target": "serial_1", "type": "communication",
+         "port": {"pump_1": "port", "serial_1": "port"}}
+    ]
+}
+```
+
+---
+
+## 验证
+
+```bash
+# 启动测试
+unilab -g unilabos/test/experiments/<name>.json --complete_registry
+
+# 仅检查注册表
+python -m unilabos --check_mode --skip_env_check
+```
+
+---
+
+## 高级模式
+
+处理复杂图文件时，详见 [reference.md](reference.md)：ResourceDict 完整字段 schema、Pose 标准化规则、Handle 验证机制、GraphML 格式支持、外部系统工作站完整 config 结构。
+
+---
+
+## 常见错误
+
+| 错误 | 原因 | 修复 |
+|------|------|------|
+| `class` 找不到 | 注册表中无此设备名 | 在 `unilabos/registry/devices/` 或 `resources/` 中搜索正确名称 |
+| children/parent 不一致 | 子节点 `parent` 与父节点 `children` 不匹配 | 确保双向一致 |
+| `_resource_child_name` 不匹配 | Deck 引用名与 Deck 节点 `id` 不同 | 保持一致 |
+| Link 端口错误 | `port` 中的 key 不是 source/target 的 `id` | key 必须是对应节点的 `id` |
+| 重复 UUID | 多个节点有相同 `uuid` | 删除或修改 UUID |
+
+---
+
+## 参考路径
+
+| 内容 | 路径 |
+|------|------|
+| 图文件目录 | `unilabos/test/experiments/` |
+| 协议测试站 | `unilabos/test/experiments/Protocol_Test_Station/` |
+| 图加载代码 | `unilabos/resources/graphio.py` |
+| 节点模型 | `unilabos/resources/resource_tracker.py` |
+| 设备注册表 | `unilabos/registry/devices/` |
+| 资源注册表 | `unilabos/registry/resources/` |
+| 用户文档 | `docs/user_guide/graph_files.md` |

.cursor/skills/edit-experiment-graph/reference.md

@@ -0,0 +1,255 @@
+# 实验图高级参考
+
+本文件是 SKILL.md 的补充，包含 ResourceDict 完整 schema、Handle 验证、GraphML 格式、Pose 标准化规则和复杂图文件结构。Agent 在需要处理这些场景时按需阅读。
+
+---
+
+## 1. ResourceDict 完整字段
+
+`unilabos/resources/resource_tracker.py` 中定义的节点数据模型：
+
+| 字段 | 类型 | 别名 | 说明 |
+|------|------|------|------|
+| `id` | `str` | — | 节点唯一标识 |
+| `uuid` | `str` | — | 全局唯一标识 |
+| `name` | `str` | — | 显示名称 |
+| `description` | `str` | — | 描述（默认 `""` ） |
+| `resource_schema` | `Dict[str, Any]` | `schema` | 资源 schema |
+| `model` | `Dict[str, Any]` | — | 3D 模型信息 |
+| `icon` | `str` | — | 图标（默认 `""` ） |
+| `parent_uuid` | `Optional[str]` | — | 父节点 UUID |
+| `parent` | `Optional[ResourceDict]` | — | 父节点引用（序列化时 exclude） |
+| `type` | `Union[Literal["device"], str]` | — | 节点类型 |
+| `klass` | `str` | `class` | 注册表类名 |
+| `pose` | `ResourceDictPosition` | — | 位姿信息 |
+| `config` | `Dict[str, Any]` | — | 配置参数 |
+| `data` | `Dict[str, Any]` | — | 运行时数据 |
+| `extra` | `Dict[str, Any]` | — | 扩展数据 |
+
+### Pose 完整结构（ResourceDictPosition）
+
+| 字段 | 类型 | 默认值 | 说明 |
+|------|------|--------|------|
+| `size` | `{width, height, depth}` | `{0,0,0}` | 节点尺寸 |
+| `scale` | `{x, y, z}` | `{1,1,1}` | 缩放比例 |
+| `layout` | `"2d"/"x-y"/"z-y"/"x-z"` | `"x-y"` | 布局方向 |
+| `position` | `{x, y, z}` | `{0,0,0}` | 2D 位置 |
+| `position3d` | `{x, y, z}` | `{0,0,0}` | 3D 位置 |
+| `rotation` | `{x, y, z}` | `{0,0,0}` | 旋转角度 |
+| `cross_section_type` | `"rectangle"/"circle"/"rounded_rectangle"` | `"rectangle"` | 横截面形状 |
+
+---
+
+## 2. Position / Pose 标准化规则
+
+图文件中的 `position` 有多种写法，加载时自动标准化。
+
+### 输入格式兼容
+
+```json
+// 格式 A: 直接 {x, y, z}（最常用）
+"position": {"x": 100, "y": 200, "z": 0}
+
+// 格式 B: 嵌套 position
+"position": {"position": {"x": 100, "y": 200, "z": 0}}
+
+// 格式 C: 使用 pose 字段
+"pose": {"position": {"x": 100, "y": 200, "z": 0}}
+
+// 格式 D: 顶层 x, y, z（无 position 字段）
+"x": 100, "y": 200, "z": 0
+```
+
+### 标准化流程
+
+1. **graphio.py `canonicalize_nodes_data`**：若 `position` 不是 dict，从节点顶层提取 `x/y/z` 填入 `pose.position`
+2. **resource_tracker.py `get_resource_instance_from_dict`**：若 `position.x` 存在（旧格式），转为 `{"position": {"x":..., "y":..., "z":...}}`
+3. `pose.size` 从 `config.size_x/size_y/size_z` 自动填充
+
+---
+
+## 3. Handle 验证
+
+启动时系统验证 link 中的 `sourceHandle` / `targetHandle` 是否在注册表的 `handles` 中定义。
+
+```python
+# unilabos/app/main.py (约 449-481 行)
+source_handler_keys = [
+    h["handler_key"] for h in materials[source_node.klass]["handles"]
+    if h["io_type"] == "source"
+]
+target_handler_keys = [
+    h["handler_key"] for h in materials[target_node.klass]["handles"]
+    if h["io_type"] == "target"
+]
+if source_handle not in source_handler_keys:
+    print_status(f"节点 {source_node.id} 的source端点 {source_handle} 不存在", "error")
+    resource_edge_info.pop(...)  # 移除非法 link
+```
+
+**Handle 定义在注册表 YAML 中：**
+
+```yaml
+my_device:
+  handles:
+  - handler_key: access
+    io_type: target
+    data_type: fluid
+    side: NORTH
+    label: access
+```
+
+> 大多数简单设备不定义 handles，此验证仅对有 `sourceHandle`/`targetHandle` 的 link 生效。
+
+---
+
+## 4. GraphML 格式支持
+
+除 JSON 外，系统也支持 GraphML 格式（`unilabos/resources/graphio.py::read_graphml`）。
+
+### 与 JSON 的关键差异
+
+| 特性 | JSON | GraphML |
+|------|------|---------|
+| 父子关系 | `parent`/`children` 字段 | `::` 分隔的节点 ID（如 `station::pump_1`） |
+| 加载后 | 直接解析 | 先 `nx.read_graphml` 再转 JSON 格式 |
+| 输出 | 不生成副本 | 自动生成等价的 `.json` 文件 |
+
+### GraphML 转换流程
+
+```
+nx.read_graphml(file)
+    ↓ 用 label 重映射节点名
+    ↓ 从 "::" 推断 parent_relation
+nx.relabel_nodes + nx.node_link_data
+    ↓ canonicalize_nodes_data + canonicalize_links_ports
+    ↓ 写出等价 JSON 文件
+physical_setup_graph + handle_communications
+```
+
+---
+
+## 5. 复杂图文件结构示例
+
+### 外部系统工作站完整 config
+
+以 `reaction_station_bioyond.json` 为例，工作站 `config` 中的关键字段：
+
+```json
+{
+    "config": {
+        "api_key": "DE9BDDA0",
+        "api_host": "http://172.21.103.36:45388",
+
+        "workflow_mappings": {
+            "scheduler_start": {"workflow": "start", "params": {}},
+            "create_order": {"workflow": "create_order", "params": {}}
+        },
+
+        "material_type_mappings": {
+            "BIOYOND_PolymerStation_Reactor": ["反应器", "type-uuid-here"],
+            "BIOYOND_PolymerStation_1BottleCarrier": ["试剂瓶", "type-uuid-here"]
+        },
+
+        "warehouse_mapping": {
+            "堆栈1左": {
+                "uuid": "warehouse-uuid-here",
+                "site_uuids": {
+                    "A01": "site-uuid-1",
+                    "A02": "site-uuid-2"
+                }
+            }
+        },
+
+        "http_service_config": {
+            "enabled": true,
+            "host": "0.0.0.0",
+            "port": 45399,
+            "routes": ["/callback/workflow", "/callback/material"]
+        },
+
+        "deck": {
+            "data": {
+                "_resource_child_name": "Bioyond_Deck",
+                "_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_PolymerReactionStation_Deck"
+            }
+        },
+
+        "size_x": 2700.0,
+        "size_y": 1080.0,
+        "size_z": 2500.0,
+        "protocol_type": [],
+        "data": {}
+    }
+}
+```
+
+### 子设备 Reactor 节点
+
+```json
+{
+    "id": "reactor_1",
+    "name": "reactor_1",
+    "parent": "reaction_station_bioyond",
+    "type": "device",
+    "class": "bioyond_reactor",
+    "position": {"x": 1150, "y": 300, "z": 0},
+    "config": {
+        "reactor_index": 0,
+        "bioyond_workflow_key": "reactor_1"
+    },
+    "data": {}
+}
+```
+
+### Deck 节点
+
+```json
+{
+    "id": "Bioyond_Deck",
+    "name": "Bioyond_Deck",
+    "parent": "reaction_station_bioyond",
+    "type": "deck",
+    "class": "BIOYOND_PolymerReactionStation_Deck",
+    "position": {"x": 0, "y": 0, "z": 0},
+    "config": {
+        "type": "BIOYOND_PolymerReactionStation_Deck",
+        "setup": true,
+        "rotation": {"x": 0, "y": 0, "z": 0, "type": "Rotation"}
+    },
+    "data": {}
+}
+```
+
+---
+
+## 6. Link 端口标准化
+
+`graphio.py::canonicalize_links_ports` 处理 `port` 字段的多种格式：
+
+```python
+# 输入: 字符串格式 "(A,B)"
+"port": "(pump_1, valve_1)"
+# 输出: 字典格式
+"port": {"source_id": "pump_1", "target_id": "valve_1"}
+
+# 输入: 已是字典
+"port": {"pump_1": "port", "serial_1": "port"}
+# 保持不变
+
+# 输入: 无 port 字段
+# 自动补充空 port
+```
+
+---
+
+## 7. 关键路径
+
+| 内容 | 路径 |
+|------|------|
+| ResourceDict 模型 | `unilabos/resources/resource_tracker.py` |
+| 图加载 + 标准化 | `unilabos/resources/graphio.py` |
+| Handle 验证 | `unilabos/app/main.py` (449-481 行) |
+| 反应站图文件 | `unilabos/test/experiments/reaction_station_bioyond.json` |
+| 配液站图文件 | `unilabos/test/experiments/dispensing_station_bioyond.json` |
+| 用户文档 | `docs/user_guide/graph_files.md` |

.cursorignore

@@ -0,0 +1,188 @@
+# ============================================================
+# Uni-Lab-OS Cursor Ignore 配置，控制 Cursor AI 的文件索引范围
+# ============================================================
+
+# ==================== 敏感配置文件 ====================
+# 本地配置（可能包含密钥）
+**/local_config.py
+test_config.py
+local_test*.py
+
+# 环境变量和密钥
+.env
+.env.*
+**/.certs/
+*.pem
+*.key
+credentials.json
+secrets.yaml
+
+# ==================== 二进制和 3D 模型文件 ====================
+# 3D 模型文件（无需索引）
+*.stl
+*.dae
+*.glb
+*.gltf
+*.obj
+*.fbx
+*.blend
+
+# URDF/Xacro 机器人描述文件（大型XML）
+*.xacro
+
+# 图片文件
+*.png
+*.jpg
+*.jpeg
+*.gif
+*.webp
+*.ico
+*.svg
+*.bmp
+
+# 压缩包
+*.zip
+*.tar
+*.tar.gz
+*.tgz
+*.bz2
+*.rar
+*.7z
+
+# ==================== Python 生成文件 ====================
+__pycache__/
+*.py[cod]
+*$py.class
+*.so
+*.pyd
+*.egg
+*.egg-info/
+.eggs/
+dist/
+build/
+*.manifest
+*.spec
+
+# ==================== IDE 和编辑器 ====================
+.idea/
+.vscode/
+*.swp
+*.swo
+*~
+.#*
+
+# ==================== 测试和覆盖率 ====================
+.pytest_cache/
+.coverage
+.coverage.*
+htmlcov/
+.tox/
+.nox/
+coverage.xml
+*.cover
+
+# ==================== 虚拟环境 ====================
+.venv/
+venv/
+env/
+ENV/
+
+# ==================== ROS 2 生成文件 ====================
+# ROS 构建目录
+build/
+install/
+log/
+logs/
+devel/
+
+# ROS 消息生成
+msg_gen/
+srv_gen/
+msg/*Action.msg
+msg/*ActionFeedback.msg
+msg/*ActionGoal.msg
+msg/*ActionResult.msg
+msg/*Feedback.msg
+msg/*Goal.msg
+msg/*Result.msg
+msg/_*.py
+srv/_*.py
+build_isolated/
+devel_isolated/
+
+# ROS 动态配置
+*.cfgc
+/cfg/cpp/
+/cfg/*.py
+
+# ==================== 项目特定目录 ====================
+# 工作数据目录
+unilabos_data/
+
+# 临时和输出目录
+temp/
+output/
+cursor_docs/
+configs/
+
+# 文档构建
+docs/_build/
+/site
+
+# ==================== 大型数据文件 ====================
+# 点云数据
+*.pcd
+
+# GraphML 图形文件
+*.graphml
+
+# 日志文件
+*.log
+
+# 数据库
+*.sqlite3
+*.db
+
+# Jupyter 检查点
+.ipynb_checkpoints/
+
+# ==================== 设备网格资源 ====================
+# 3D 网格文件目录（包含大量 STL/DAE 文件）
+unilabos/device_mesh/devices/**/*.stl
+unilabos/device_mesh/devices/**/*.dae
+unilabos/device_mesh/resources/**/*.stl
+unilabos/device_mesh/resources/**/*.glb
+unilabos/device_mesh/resources/**/*.xacro
+
+# RViz 配置
+*.rviz
+
+# ==================== 系统文件 ====================
+.DS_Store
+Thumbs.db
+desktop.ini
+
+# ==================== 锁文件 ====================
+poetry.lock
+Pipfile.lock
+pdm.lock
+package-lock.json
+yarn.lock
+
+# ==================== 类型检查缓存 ====================
+.mypy_cache/
+.dmypy.json
+.pytype/
+.pyre/
+pyrightconfig.json
+
+# ==================== 其他 ====================
+# Catkin
+CATKIN_IGNORE
+
+# Eclipse/Qt
+.project
+.cproject
+CMakeLists.txt.user
+*.user
+qtcreator-*

.github/copilot-instructions.md

@@ -0,0 +1,11 @@
+## 设备接入
+
+当被要求添加设备驱动时，参考 `docs/ai_guides/add_device.md`。
+该指南包含完整的模板和已有设备接口参考。
+
+## 关键规则
+
+- 动作方法的参数名是接口契约，不可重命名
+- `status` 字符串必须与同类已有设备一致
+- `self.data` 必须在 `__init__` 中预填充所有属性字段
+- 异步方法中使用 `await self._ros_node.sleep()`，禁止 `time.sleep()`

AGENTS.md

@@ -0,0 +1,21 @@
+# Uni-Lab-OS AI Agent 指南
+
+## 设备接入
+
+当用户要求添加/接入新设备时，读取 `docs/ai_guides/add_device.md` 并按其流程执行。
+该指南完全自包含，包含物模型模板、现有设备接口快照、常见错误和验证清单。
+
+## 关键规则
+
+- 动作方法的参数名是接口契约，不可重命名（如 `volume` 不能改为 `volume_ml`）
+- `status` 字符串必须与同类已有设备一致（如 `"Idle"` 不能改为 `"就绪"`）
+- `self.data` 必须在 `__init__` 中预填充所有属性字段
+- 异步方法中使用 `await self._ros_node.sleep()`，禁止 `time.sleep()` 和 `asyncio.sleep()`
+
+## 项目结构
+
+- 设备驱动：`unilabos/devices/<category>/<device_name>.py`
+- 设备注册表：`unilabos/registry/devices/<device_name>.yaml`
+- 实验图文件：`unilabos/test/experiments/*.json`
+- 人类开发文档：`docs/developer_guide/`
+- AI 专用指南：`docs/ai_guides/`

CLAUDE.md

@@ -0,0 +1,14 @@
+# Uni-Lab-OS
+
+## 设备接入
+
+读取 `docs/ai_guides/add_device.md` 获取完整的自包含指南。
+如果可以访问仓库，优先搜索 `unilabos/registry/devices/` 获取最新设备接口；
+否则使用指南中内联的「现有设备接口快照」。
+
+## 关键规则
+
+- 动作方法的参数名是接口契约，不可重命名（如 `volume` 不能改为 `volume_ml`）
+- `status` 字符串必须与同类已有设备一致（如 `"Idle"` 不能改为 `"就绪"`）
+- `self.data` 必须在 `__init__` 中预填充所有属性字段
+- 异步方法中使用 `await self._ros_node.sleep()`，禁止 `time.sleep()` 和 `asyncio.sleep()`

docs/ai_guides/agent_prompt_template.md

@@ -0,0 +1,344 @@
+# Uni-Lab-OS 设备接入 Agent — 提示词模板
+
+> 本文件提供一套可直接复制使用的 Agent 系统提示词，以及各平台的配置说明。
+> 提示词模板与 `add_device.md`（领域知识）配合使用，前者控制 Agent 行为，后者提供完整的技术细节。
+
+---
+
+## 系统提示词模板
+
+以下内容可直接作为系统提示词 / Instructions / Custom Instructions 使用。`{{...}}` 标记的变量根据平台替换。
+
+---
+
+### 开始复制 ↓
+
+```
+你是 Uni-Lab-OS 设备接入专家。你的任务是帮助用户将新的实验室硬件设备接入 Uni-Lab-OS 系统。
+
+你能做的事：
+- 根据用户描述，生成完整的设备驱动代码（Python）、注册表（YAML）和实验图文件（JSON）
+- 解读用户提供的通信协议文档、SDK 代码、或口述的指令格式
+- 诊断已有驱动代码的接口对齐问题
+
+你不能做的事：
+- 凭空猜测硬件私有通信指令（必须从用户提供的资料中获取）
+- 替代真实硬件联调测试
+
+## 知识来源
+
+{{KNOWLEDGE_LOADING}}
+
+## 工作流程
+
+当用户要求接入新设备时，严格按以下流程执行。每个暂停点必须等待用户确认后再继续。
+
+### 阶段 1：设备画像（交互）
+
+向用户收集以下三个信息，可以一次性提问：
+
+1. **设备类别** — 属于以下哪一种？
+   - temperature（温控）、pump_and_valve（泵阀）、motor（电机）
+   - heaterstirrer（加热搅拌）、balance（天平）、sensor（传感器）
+   - liquid_handling（液体处理）、robot_arm（机械臂）、workstation（工作站）
+   - virtual（虚拟设备）、custom（自定义）
+   - 如果是 pump_and_valve，进一步确认子类型：注射泵 / 电磁阀 / 蠕动泵
+
+2. **设备英文名称** — 用于文件名和类名（如 my_heater、runze_sy03b）
+
+3. **通信协议** — Serial(RS232/RS485) / Modbus RTU / Modbus TCP / TCP Socket / HTTP API / OPC UA / 无通信（虚拟）
+
+⏸️ **暂停：等待用户回答后继续**
+
+### 阶段 2：指令协议收集（交互）
+
+根据上一步确定的通信协议，引导用户提供指令信息：
+
+- 如果用户有 **SDK/驱动代码**：请用户提供代码文件，你从中提取通信逻辑
+- 如果用户有 **协议文档**：请用户提供文档（PDF/图片/文本），你从中解析指令格式
+- 如果用户 **口头描述**：针对每个标准动作逐一确认硬件指令
+- 如果是 **标准协议**（Modbus 寄存器表、SCPI）：请用户提供寄存器/指令映射
+- 如果是 **虚拟设备**：跳过此阶段
+
+⏸️ **暂停：确认已获取足够的指令协议信息**
+
+### 阶段 3：确认摘要
+
+在开始生成代码前，向用户展示你的理解摘要：
+
+```
+设备接入摘要：
+- 设备名称：<name>
+- 设备类别：<category>（<subtype>）
+- 通信协议：<protocol>
+- 指令来源：<source>
+- 将要实现的属性：<list>
+- 将要实现的动作：<list>
+- 同类已有设备：<existing>（将对齐其接口）
+```
+
+⏸️ **暂停：用户确认"没问题"后再生成代码**
+
+### 阶段 4：自动生成（无需暂停）
+
+按以下顺序自动执行：
+
+1. **对齐同类设备接口**（指南第四步）
+   - 查阅指南中的「现有设备接口快照」或搜索仓库注册表
+   - 确保所有已有设备的 status_types 和动作方法都被覆盖
+   - 参数名必须完全一致
+
+2. **生成驱动代码** — `unilabos/devices/<category>/<name>.py`
+
+3. **生成注册表** — `unilabos/registry/devices/<name>.yaml`（最小配置）
+
+4. **生成图文件** — `unilabos/test/experiments/graph_example_<name>.json`
+
+### 阶段 5：验证输出
+
+生成完成后，逐项检查对齐验证清单并展示结果：
+
+```
+对齐验证清单：
+- [x] 所有动作方法的参数名与已有设备完全一致
+- [x] status 属性返回的字符串值与已有设备一致
+- [x] 已有设备的所有 status_types 字段都有对应 @property
+- [x] 已有设备的所有非 auto- 前缀的 action 都有对应方法
+- [x] self.data 在 __init__ 中已预填充所有属性字段的默认值
+- [x] 串口/二进制协议的响应解析先定位帧起始标记
+```
+
+如果有未通过的项，主动修复后再展示。
+
+## 硬约束（违反任何一条都会导致设备接入失败）
+
+1. **禁止重命名参数** — 动作方法的参数名（如 volume、position、max_velocity）是接口契约，框架通过参数名分派调用。绝不能加后缀（如 volume_ml）、改名（如 speed_ml_s）。单位写在 docstring 中。
+
+2. **status 字符串必须一致** — 如果同类已有设备用英文（如 "Idle" / "Busy"），新驱动必须用相同的字符串，不能改为中文（如 "就绪"）。
+
+3. **self.data 必须预填充** — 不能用空字典 {}。框架在 initialize() 之前就可能读取属性值。每个 @property 对应的键都必须在 __init__ 中有初始值。
+
+4. **禁止跳过接口对齐** — 对齐同类设备接口是强制步骤。缺失的属性和动作会导致设备在工作流中不可互换。
+
+5. **串口解析先找帧头** — RS-485 总线上响应前常有回声/噪声字节。必须先定位帧起始标记（如 /、0xFE），禁止用硬编码索引直接解析。
+
+6. **异步等待用 _ros_node.sleep** — 在 async 方法中使用 await self._ros_node.sleep()，禁止 time.sleep()（阻塞事件循环）和 asyncio.sleep()。
+
+7. **物理单位对外暴露** — 对外参数使用用户友好的物理单位（mL、°C、RPM），驱动内部负责转换到硬件原始值（步数、Hz、寄存器值）。
+
+## 代码骨架参考
+
+所有设备驱动遵循以下结构：
+
+```python
+import logging
+import time as time_module
+from typing import Dict, Any
+
+try:
+    from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
+except ImportError:
+    BaseROS2DeviceNode = None
+
+class MyDevice:
+    _ros_node: "BaseROS2DeviceNode"
+
+    def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
+        if device_id is None and 'id' in kwargs:
+            device_id = kwargs.pop('id')
+        if config is None and 'config' in kwargs:
+            config = kwargs.pop('config')
+        self.device_id = device_id or "unknown_device"
+        self.config = config or {}
+        self.logger = logging.getLogger(f"MyDevice.{self.device_id}")
+        self.data = {
+            "status": "Idle",
+            # 所有 @property 的键都必须在此预填充
+        }
+
+    def post_init(self, ros_node: "BaseROS2DeviceNode"):
+        self._ros_node = ros_node
+
+    async def initialize(self) -> bool:
+        self.data["status"] = "Idle"
+        return True
+
+    async def cleanup(self) -> bool:
+        self.data["status"] = "Offline"
+        return True
+
+    @property
+    def status(self) -> str:
+        return self.data.get("status", "Idle")
+```
+
+## 注册表最小配置
+
+```yaml
+my_device:
+  class:
+    module: unilabos.devices.<category>.<file>:MyDevice
+    type: python
+```
+
+启动时 --complete_registry 自动生成 status_types 和 action_value_mappings。
+
+## 图文件模板
+
+```json
+{
+    "nodes": [
+        {
+            "id": "my_device_1",
+            "name": "设备名称",
+            "children": [],
+            "parent": null,
+            "type": "device",
+            "class": "my_device",
+            "position": {"x": 0, "y": 0, "z": 0},
+            "config": {},
+            "data": {}
+        }
+    ]
+}
+```
+
+## 现有设备接口快照（对齐用）
+
+对齐时参考以下已有设备接口。如果能联网，优先从 GitHub 获取最新版本：
+https://github.com/dptech-corp/Uni-Lab-OS/tree/main/unilabos/registry/devices/
+
+### pump_and_valve — 注射泵
+
+已有设备：syringe_pump_with_valve.runze.SY03B-T06
+
+属性：status(str, "Idle"/"Busy"), valve_position(str), position(float, mL), max_velocity(float, mL/s), mode(int), plunger_position(String), velocity_grade(String), velocity_init(String), velocity_end(String)
+
+方法签名（参数名不可改）：
+- initialize()
+- set_valve_position(position)
+- set_position(position: float, max_velocity: float = None)
+- pull_plunger(volume: float)
+- push_plunger(volume: float)
+- set_max_velocity(velocity: float)
+- set_velocity_grade(velocity)
+- stop_operation()
+
+### pump_and_valve — 电磁阀
+
+属性：status(str), valve_position(str)
+方法：open(), close(), set_valve_position(position), is_open(), is_closed()
+
+### temperature
+
+属性：status(str), temp(float, °C), temp_target(float, °C), stir_speed(float, RPM), temp_warning(float, °C)
+
+### motor
+
+属性：status(str), position(int)
+
+### sensor
+
+属性：level(bool), rssi(int)
+```
+
+### 结束复制 ↑
+
+---
+
+## `{{KNOWLEDGE_LOADING}}` 变量替换
+
+根据平台能力，将提示词中的 `{{KNOWLEDGE_LOADING}}` 替换为以下对应内容：
+
+### 方案 A：有知识库（Custom GPT / Claude Project）
+
+```
+你的知识库中包含 add_device.md 文件，这是完整的设备接入指南。
+执行工作流时，参考该文件获取物模型模板、通信协议代码片段、指令协议模式和常见错误检查清单。
+本提示词中的「现有设备接口快照」和「硬约束」是从指南中提炼的关键内容，以确保即使知识库检索不完整也能正确工作。
+```
+
+### 方案 B：有联网能力
+
+```
+执行工作流前，从以下 URL 获取完整的设备接入指南：
+https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/docs/ai_guides/add_device.md
+
+该指南包含物模型模板、通信协议代码片段、指令协议模式和常见错误检查清单。
+如果无法访问 URL，使用本提示词中内联的「现有设备接口快照」和「代码骨架参考」作为兜底。
+```
+
+### 方案 C：无知识库、无联网
+
+```
+完整的设备接入指南需要用户在对话中提供。
+如果用户未主动提供，请在阶段 1 开始前询问：
+"请将 add_device.md 的内容粘贴到对话中，或上传该文件。如果没有该文件，我将使用内置的精简规则工作。"
+
+本提示词已内联了最关键的内容（硬约束 + 代码骨架 + 接口快照），足以生成基本正确的驱动。
+但完整指南包含更多物模型模板和通信协议代码片段，能显著提升生成质量。
+```
+
+---
+
+## 各平台配置指南
+
+### OpenAI Custom GPT
+
+1. 进入 https://chat.openai.com/gpts/editor
+2. **Name**：Uni-Lab-OS 设备接入助手
+3. **Description**：帮助用户将实验室硬件设备接入 Uni-Lab-OS 系统，自动生成驱动代码、注册表和图文件。
+4. **Instructions**：粘贴上方系统提示词，`{{KNOWLEDGE_LOADING}}` 替换为方案 A
+5. **Knowledge**：上传 `docs/ai_guides/add_device.md`
+6. **Capabilities**：开启 Code Interpreter（用于代码验证）
+7. **Conversation starters**：
+   - "我要接入一个新的注射泵"
+   - "帮我把这个 SDK 包装成 UniLab 驱动"
+   - "检查我的设备驱动有没有接口问题"
+
+### Claude Project
+
+1. 创建新 Project
+2. **Custom Instructions**：粘贴系统提示词，`{{KNOWLEDGE_LOADING}}` 替换为方案 A
+3. **Project Knowledge**：上传 `docs/ai_guides/add_device.md`
+
+### API Agent（LangChain / AutoGen / 自建框架）
+
+```python
+system_prompt = """
+<粘贴完整系统提示词，{{KNOWLEDGE_LOADING}} 替换为方案 B>
+"""
+
+# 如果框架支持工具调用，可注册以下工具：
+tools = [
+    {
+        "name": "fetch_device_guide",
+        "description": "获取最新的 Uni-Lab-OS 设备接入指南",
+        "url": "https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/docs/ai_guides/add_device.md"
+    },
+    {
+        "name": "fetch_registry",
+        "description": "获取最新的设备注册表",
+        "url": "https://raw.githubusercontent.com/dptech-corp/Uni-Lab-OS/main/unilabos/registry/devices/{category}.yaml"
+    },
+]
+```
+
+### Cursor Agent Mode
+
+无需使用本模板。Cursor 中使用已有的 `.cursor/skills/add-device/SKILL.md`，它会自动读取 `docs/ai_guides/add_device.md` 并利用 Cursor 的工具能力（Grep 搜索注册表、AskQuestion 收集信息等）。
+
+### 纯网页对话（ChatGPT / Claude 无 Project）
+
+1. 第一条消息粘贴系统提示词（`{{KNOWLEDGE_LOADING}}` 替换为方案 C）
+2. 第二条消息上传或粘贴 `add_device.md`
+3. 第三条消息开始描述设备
+
+---
+
+## 维护说明
+
+- **硬约束更新**：如果 `add_device.md` 中新增了禁止事项或常见错误，需要同步更新本模板的「硬约束」部分
+- **接口快照更新**：新增设备类别或已有设备接口变更时，需要同步更新本模板的「现有设备接口快照」部分
+- **工作流调整**：如果接入流程发生变化（新增步骤、合并步骤），需要同步调整「工作流程」部分
+- 本模板与 `add_device.md` 是**互补关系**：模板定义 Agent 行为，指南提供领域知识。两者独立维护

recipes/msgs/recipe.yaml

@@ -1,6 +1,6 @@
 package:
   name: ros-humble-unilabos-msgs
-  version: 0.10.17
+  version: 0.10.18
 source:
   path: ../../unilabos_msgs
   target_directory: src

recipes/unilabos/recipe.yaml

@@ -1,6 +1,6 @@
 package:
   name: unilabos
-  version: "0.10.17"
+  version: "0.10.18"
 
 source:
   path: ../..

setup.py

@@ -4,7 +4,7 @@ package_name = 'unilabos'
 
 setup(
     name=package_name,
-    version='0.10.17',
+    version='0.10.18',
     packages=find_packages(),
     include_package_data=True,
     install_requires=['setuptools'],

unilabos/__init__.py

@@ -1 +1 @@
-__version__ = "0.10.17"
+__version__ = "0.10.18"

unilabos/app/main.py

@@ -1,6 +1,7 @@
 import argparse
 import asyncio
 import os
+import platform
 import shutil
 import signal
 import sys
@@ -358,7 +359,7 @@ def main():
     if BasicConfig.test_mode:
         print_status("启用测试模式：所有动作将模拟执行，不调用真实硬件", "warning")
     BasicConfig.communication_protocol = "websocket"
-    machine_name = os.popen("hostname").read().strip()
+    machine_name = platform.node()
     machine_name = "".join([c if c.isalnum() or c == "_" else "_" for c in machine_name])
     BasicConfig.machine_name = machine_name
     BasicConfig.vis_2d_enable = args_dict["2d_vis"]

unilabos/app/register.py

@@ -38,9 +38,9 @@ def register_devices_and_resources(lab_registry, gather_only=False) -> Optional[
             response = http_client.resource_registry({"resources": list(devices_to_register.values())})
             cost_time = time.time() - start_time
             if response.status_code in [200, 201]:
-                logger.info(f"[UniLab Register] 成功注册 {len(devices_to_register)} 个设备 {cost_time}ms")
+                logger.info(f"[UniLab Register] 成功注册 {len(devices_to_register)} 个设备 {cost_time}s")
             else:
-                logger.error(f"[UniLab Register] 设备注册失败: {response.status_code}, {response.text} {cost_time}ms")
+                logger.error(f"[UniLab Register] 设备注册失败: {response.status_code}, {response.text} {cost_time}s")
         except Exception as e:
             logger.error(f"[UniLab Register] 设备注册异常: {e}")
 
@@ -51,9 +51,9 @@ def register_devices_and_resources(lab_registry, gather_only=False) -> Optional[
             response = http_client.resource_registry({"resources": list(resources_to_register.values())})
             cost_time = time.time() - start_time
             if response.status_code in [200, 201]:
-                logger.info(f"[UniLab Register] 成功注册 {len(resources_to_register)} 个资源 {cost_time}ms")
+                logger.info(f"[UniLab Register] 成功注册 {len(resources_to_register)} 个资源 {cost_time}s")
             else:
-                logger.error(f"[UniLab Register] 资源注册失败: {response.status_code}, {response.text} {cost_time}ms")
+                logger.error(f"[UniLab Register] 资源注册失败: {response.status_code}, {response.text} {cost_time}s")
         except Exception as e:
             logger.error(f"[UniLab Register] 资源注册异常: {e}")
 

unilabos/app/web/client.py

@@ -3,7 +3,7 @@ HTTP客户端模块
 
 提供与远程服务器通信的客户端功能，只有host需要用
 """
-
+import gzip
 import json
 import os
 from typing import List, Dict, Any, Optional
@@ -290,10 +290,17 @@ class HTTPClient:
         Returns:
             Response: API响应对象
         """
+        compressed_body = gzip.compress(
+            json.dumps(registry_data, ensure_ascii=False, default=str).encode("utf-8")
+        )
         response = requests.post(
             f"{self.remote_addr}/lab/resource",
-            json=registry_data,
-            headers={"Authorization": f"Lab {self.auth}"},
+            data=compressed_body,
+            headers={
+                "Authorization": f"Lab {self.auth}",
+                "Content-Type": "application/json",
+                "Content-Encoding": "gzip",
+            },
             timeout=30,
         )
         if response.status_code not in [200, 201]:

unilabos/app/ws_client.py

@@ -466,6 +466,7 @@ class MessageProcessor:
                 async with websockets.connect(
                     self.websocket_url,
                     ssl=ssl_context,
+                    open_timeout=20,
                     ping_interval=WSConfig.ping_interval,
                     ping_timeout=10,
                     additional_headers={
@@ -497,6 +498,18 @@ class MessageProcessor:
             except websockets.exceptions.ConnectionClosed:
                 logger.warning("[MessageProcessor] Connection closed")
                 self.connected = False
+            except TimeoutError:
+                logger.warning(
+                    f"[MessageProcessor] Connection timeout (attempt {self.reconnect_count + 1}), "
+                    f"server may be temporarily unavailable"
+                )
+                self.connected = False
+            except websockets.exceptions.InvalidStatus as e:
+                logger.warning(
+                    f"[MessageProcessor] Server returned unexpected HTTP status {e.response.status_code}, "
+                    f"WebSocket endpoint may not be ready yet"
+                )
+                self.connected = False
             except Exception as e:
                 logger.error(f"[MessageProcessor] Connection error: {str(e)}")
                 logger.error(traceback.format_exc())
@@ -505,18 +518,19 @@ class MessageProcessor:
                 self.websocket = None
 
             # 重连逻辑
-            if self.is_running and self.reconnect_count < WSConfig.max_reconnect_attempts:
+            if not self.is_running:
+                break
+            if self.reconnect_count < WSConfig.max_reconnect_attempts:
                 self.reconnect_count += 1
+                backoff = min(WSConfig.reconnect_interval * (2 ** (self.reconnect_count - 1)), 60)
                 logger.info(
-                    f"[MessageProcessor] Reconnecting in {WSConfig.reconnect_interval}s "
+                    f"[MessageProcessor] Reconnecting in {backoff}s "
                     f"(attempt {self.reconnect_count}/{WSConfig.max_reconnect_attempts})"
                 )
-                await asyncio.sleep(WSConfig.reconnect_interval)
-            elif self.reconnect_count >= WSConfig.max_reconnect_attempts:
+                await asyncio.sleep(backoff)
+            else:
                 logger.error("[MessageProcessor] Max reconnection attempts reached")
                 break
-            else:
-                self.reconnect_count -= 1
 
     async def _message_handler(self):
         """处理接收到的消息"""
@@ -1184,6 +1198,11 @@ class QueueProcessor:
         logger.debug(f"[QueueProcessor] Sending busy status for {len(queued_jobs)} queued jobs")
 
         for job_info in queued_jobs:
+            # 快照可能已过期：在遍历过程中 end_job() 可能已将此 job 移至 READY，
+            # 此时不应再发送 busy/need_more，否则会覆盖已发出的 free=True 通知
+            if job_info.status != JobStatus.QUEUE:
+                continue
+
             message = {
                 "action": "report_action_state",
                 "data": {

unilabos/devices/liquid_handling/liquid_handler_abstract.py

@@ -21,7 +21,7 @@ from pylabrobot.resources import (
     ResourceHolder,
     Lid,
     Trash,
-    Tip,
+    Tip, TubeRack,
 )
 from typing_extensions import TypedDict
 
@@ -57,6 +57,18 @@ class TransferLiquidReturn(TypedDict):
     targets: List[List[ResourceDict]]
 
 
+
+class SetLiquidReturn(TypedDict):
+    wells: list
+    volumes: list
+
+
+class SetLiquidFromPlateReturn(TypedDict):
+    plate: list
+    wells: list
+    volumes: list
+
+
 class LiquidHandlerMiddleware(LiquidHandler):
     def __init__(
         self, backend: LiquidHandlerBackend, deck: Deck, simulator: bool = False, channel_num: int = 8, **kwargs
@@ -696,10 +708,13 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
 
         如果 liquid_names 和 volumes 为空，但 plate 和 well_names 不为空，直接返回 plate 和 wells。
         """
-        assert issubclass(plate.__class__, Plate), "plate must be a Plate"
-        plate: Plate = cast(Plate, cast(Resource, plate))
+        assert issubclass(plate.__class__, Plate) or issubclass(plate.__class__, TubeRack) , f"plate must be a Plate, now: {type(plate)}"
+        plate: Union[Plate, TubeRack]
         # 根据 well_names 获取对应的 Well 对象
-        wells = [plate.get_well(name) for name in well_names]
+        if issubclass(plate.__class__, Plate):
+            wells = [plate.get_well(name) for name in well_names]
+        elif issubclass(plate.__class__, TubeRack):
+            wells = [plate.get_tube(name) for name in well_names]
         res_volumes = []
 
         # 如果 liquid_names 和 volumes 都为空，直接返回

unilabos/devices/liquid_handling/prcxi/prcxi.py

@@ -55,6 +55,7 @@ from unilabos.devices.liquid_handling.liquid_handler_abstract import (
     TransferLiquidReturn,
 )
 from unilabos.registry.placeholder_type import ResourceSlot
+from unilabos.resources.resource_tracker import ResourceTreeSet
 from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
 
 
@@ -90,20 +91,103 @@ class PRCXI9300Deck(Deck):
     该类定义了 PRCXI 9300 的工作台布局和槽位信息。
     """
 
-    def __init__(self, name: str, size_x: float, size_y: float, size_z: float, **kwargs):
-        super().__init__(name, size_x, size_y, size_z)
-        self.slots = [None] * 16  # PRCXI 9300/9320 最大有 16 个槽位
-        self.slot_locations = [Coordinate(0, 0, 0)] * 16
+    # T1-T16 默认位置 (4列×4行)
+    _DEFAULT_SITE_POSITIONS = [
+        (0, 0, 0), (138, 0, 0), (276, 0, 0), (414, 0, 0),         # T1-T4
+        (0, 96, 0), (138, 96, 0), (276, 96, 0), (414, 96, 0),     # T5-T8
+        (0, 192, 0), (138, 192, 0), (276, 192, 0), (414, 192, 0), # T9-T12
+        (0, 288, 0), (138, 288, 0), (276, 288, 0), (414, 288, 0), # T13-T16
+    ]
+    _DEFAULT_SITE_SIZE = {"width": 128.0, "height": 86, "depth": 0}
+    _DEFAULT_CONTENT_TYPE = ["plate", "tip_rack", "plates", "tip_racks", "tube_rack", "adaptor"]
+
+    def __init__(self, name: str, size_x: float, size_y: float, size_z: float,
+                 sites: Optional[List[Dict[str, Any]]] = None, **kwargs):
+        super().__init__(size_x, size_y, size_z, name)
+        if sites is not None:
+            self.sites: List[Dict[str, Any]] = [dict(s) for s in sites]
+        else:
+            self.sites = []
+            for i, (x, y, z) in enumerate(self._DEFAULT_SITE_POSITIONS):
+                self.sites.append({
+                    "label": f"T{i + 1}",
+                    "visible": True,
+                    "position": {"x": x, "y": y, "z": z},
+                    "size": dict(self._DEFAULT_SITE_SIZE),
+                    "content_type": list(self._DEFAULT_CONTENT_TYPE),
+                })
+        # _ordering: label -> None, 用于外部通过 list(keys()).index(site) 将 Tn 转换为 spot index
+        self._ordering = collections.OrderedDict(
+            (site["label"], None) for site in self.sites
+        )
+
+    def _get_site_location(self, idx: int) -> Coordinate:
+        pos = self.sites[idx]["position"]
+        return Coordinate(pos["x"], pos["y"], pos["z"])
+
+    def _get_site_resource(self, idx: int) -> Optional[Resource]:
+        site_loc = self._get_site_location(idx)
+        for child in self.children:
+            if child.location == site_loc:
+                return child
+        return None
+
+    def assign_child_resource(
+        self,
+        resource: Resource,
+        location: Optional[Coordinate] = None,
+        reassign: bool = True,
+        spot: Optional[int] = None,
+    ):
+        idx = spot
+        if spot is not None:
+            idx = spot
+        else:
+            for i, site in enumerate(self.sites):
+                site_loc = self._get_site_location(i)
+                if site.get("label") == resource.name:
+                    idx = i
+                    break
+                if location is not None and site_loc == location:
+                    idx = i
+                    break
+
+        if idx is None:
+            for i in range(len(self.sites)):
+                if self._get_site_resource(i) is None:
+                    idx = i
+                    break
+
+        if idx is None:
+            raise ValueError(f"No available site on deck '{self.name}' for resource '{resource.name}'")
+
+        if not reassign and self._get_site_resource(idx) is not None:
+            raise ValueError(f"Site {idx} ('{self.sites[idx]['label']}') is already occupied")
+
+        loc = self._get_site_location(idx)
+        super().assign_child_resource(resource, location=loc, reassign=reassign)
 
     def assign_child_at_slot(self, resource: Resource, slot: int, reassign: bool = False) -> None:
-        if self.slots[slot - 1] is not None and not reassign:
-            raise ValueError(f"Spot {slot} is already occupied")
+        self.assign_child_resource(resource, spot=slot - 1, reassign=reassign)
 
-        self.slots[slot - 1] = resource
-        super().assign_child_resource(resource, location=self.slot_locations[slot - 1])
+    def serialize(self) -> dict:
+        data = super().serialize()
+        sites_out = []
+        for i, site in enumerate(self.sites):
+            occupied = self._get_site_resource(i)
+            sites_out.append({
+                "label": site["label"],
+                "visible": site.get("visible", True),
+                "occupied_by": occupied.name if occupied is not None else None,
+                "position": site["position"],
+                "size": site["size"],
+                "content_type": site["content_type"],
+            })
+        data["sites"] = sites_out
+        return data
 
 
-class PRCXI9300Container(Plate):
+class PRCXI9300Container(Container):
     """PRCXI 9300 的专用 Container 类，继承自 Plate，用于槽位定位和未知模块。
 
     该类定义了 PRCXI 9300 的工作台布局和槽位信息。
@@ -116,11 +200,10 @@ class PRCXI9300Container(Plate):
         size_y: float,
         size_z: float,
         category: str,
-        ordering: collections.OrderedDict,
         model: Optional[str] = None,
         **kwargs,
     ):
-        super().__init__(name, size_x, size_y, size_z, category=category, ordering=ordering, model=model)
+        super().__init__(name, size_x, size_y, size_z, category=category, model=model)
         self._unilabos_state = {}
 
     def load_state(self, state: Dict[str, Any]) -> None:
@@ -248,14 +331,15 @@ class PRCXI9300TipRack(TipRack):
         if ordered_items is not None:
             items = ordered_items
         elif ordering is not None:
-            # 检查 ordering 中的值是否是字符串（从 JSON 反序列化时的情况）
-            # 如果是字符串，说明这是位置名称，需要让 TipRack 自己创建 Tip 对象
-            # 我们只传递位置信息（键），不传递值，使用 ordering 参数
-            if ordering and isinstance(next(iter(ordering.values()), None), str):
-                # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
+            # 检查 ordering 中的值类型来决定如何处理：
+            # - 字符串值（从 JSON 反序列化）: 只用键创建 ordering_param
+            # - None 值（从第二次往返序列化）: 同样只用键创建 ordering_param
+            # - 对象值（已经是实际的 Resource 对象）: 直接作为 ordered_items 使用
+            first_val = next(iter(ordering.values()), None) if ordering else None
+            if not ordering or first_val is None or isinstance(first_val, str):
+                # ordering 的值是字符串或 None，只使用键（位置信息）创建新的 OrderedDict
                 # 传递 ordering 参数而不是 ordered_items，让 TipRack 自己创建 Tip 对象
                 items = None
-                # 使用 ordering 参数，只包含位置信息（键）
                 ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
             else:
                 # ordering 的值已经是对象，可以直接使用
@@ -397,14 +481,15 @@ class PRCXI9300TubeRack(TubeRack):
             items_to_pass = ordered_items
             ordering_param = None
         elif ordering is not None:
-            # 检查 ordering 中的值是否是字符串（从 JSON 反序列化时的情况）
-            # 如果是字符串，说明这是位置名称，需要让 TubeRack 自己创建 Tube 对象
-            # 我们只传递位置信息（键），不传递值，使用 ordering 参数
-            if ordering and isinstance(next(iter(ordering.values()), None), str):
-                # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
+            # 检查 ordering 中的值类型来决定如何处理：
+            # - 字符串值（从 JSON 反序列化）: 只用键创建 ordering_param
+            # - None 值（从第二次往返序列化）: 同样只用键创建 ordering_param
+            # - 对象值（已经是实际的 Resource 对象）: 直接作为 ordered_items 使用
+            first_val = next(iter(ordering.values()), None) if ordering else None
+            if not ordering or first_val is None or isinstance(first_val, str):
+                # ordering 的值是字符串或 None，只使用键（位置信息）创建新的 OrderedDict
                 # 传递 ordering 参数而不是 ordered_items，让 TubeRack 自己创建 Tube 对象
                 items_to_pass = None
-                # 使用 ordering 参数，只包含位置信息（键）
                 ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
             else:
                 # ordering 的值已经是对象，可以直接使用
@@ -565,14 +650,14 @@ class PRCXI9300Handler(LiquidHandlerAbstract):
         tablets_info = []
         count = 0
         for child in deck.children:
-            if child.children:
-                if "Material" in child.children[0]._unilabos_state:
-                    number = int(child.name.replace("T", ""))
-                    tablets_info.append(
-                        WorkTablets(
-                            Number=number, Code=f"T{number}", Material=child.children[0]._unilabos_state["Material"]
-                        )
+            # 如果放其他类型的物料，是不可以的
+            if hasattr(child, "_unilabos_state") and "Material" in child._unilabos_state:
+                number = int(child.name.replace("T", ""))
+                tablets_info.append(
+                    WorkTablets(
+                        Number=number, Code=f"T{number}", Material=child._unilabos_state["Material"]
                     )
+                )
         if is_9320:
             print("当前设备是9320")
         # 始终初始化 step_mode 属性

unilabos/devices/motor/ZDT_X42.py

@@ -0,0 +1,376 @@
+# -*- coding: utf-8 -*-
+"""
+ZDT X42 Closed-Loop Stepper Motor Driver
+RS485 Serial Communication via USB-Serial Converter
+
+- Baudrate: 115200
+"""
+
+import serial
+import time
+import threading
+import struct
+import logging
+from typing import Optional, Any
+
+try:
+    from unilabos.device_comms.universal_driver import UniversalDriver
+except ImportError:
+    class UniversalDriver:
+        def __init__(self, *args, **kwargs):
+            self.logger = logging.getLogger(self.__class__.__name__)
+        def execute_command_from_outer(self, command: Any): pass
+
+from serial.rs485 import RS485Settings
+
+
+class ZDTX42Driver(UniversalDriver):
+    """
+    ZDT X42 闭环步进电机驱动器
+
+    支持功能:
+    - 速度模式运行
+    - 位置模式运行 (相对/绝对)
+    - 位置读取和清零
+    - 使能/禁用控制
+
+    通信协议:
+    - 帧格式: [设备ID] [功能码] [数据...] [校验位=0x6B]
+    - 响应长度根据功能码决定
+    """
+
+    def __init__(
+        self,
+        port: str,
+        baudrate: int = 115200,
+        device_id: int = 1,
+        timeout: float = 0.5,
+        debug: bool = False
+    ):
+        """
+        初始化 ZDT X42 电机驱动
+
+        Args:
+            port: 串口设备路径
+            baudrate: 波特率 (默认 115200)
+            device_id: 设备地址 (1-255)
+            timeout: 通信超时时间(秒)
+            debug: 是否启用调试输出
+        """
+        super().__init__()
+        self.id = device_id
+        self.debug = debug
+        self.lock = threading.RLock()
+        self.status = "idle"         # 对应注册表中的 status (str)
+        self.position = 0             # 对应注册表中的 position (int)
+
+        try:
+            self.ser = serial.Serial(
+                port=port,
+                baudrate=baudrate,
+                timeout=timeout,
+                bytesize=serial.EIGHTBITS,
+                parity=serial.PARITY_NONE,
+                stopbits=serial.STOPBITS_ONE
+            )
+
+            # 启用 RS485 模式
+            try:
+                self.ser.rs485_mode = RS485Settings(
+                    rts_level_for_tx=True,
+                    rts_level_for_rx=False
+                )
+            except Exception:
+                pass  # RS485 模式是可选的
+
+            self.logger.info(
+                f"ZDT X42 Motor connected: {port} "
+                f"(Baud: {baudrate}, ID: {device_id})"
+            )
+            # 自动使能电机，确保初始状态可运动
+            self.enable(True)
+
+            # 启动背景轮询线程，确保 position 实时刷新
+            self._stop_event = threading.Event()
+            self._polling_thread = threading.Thread(
+                target=self._update_loop,
+                name=f"ZDTPolling_{port}",
+                daemon=True
+            )
+            self._polling_thread.start()
+        except Exception as e:
+            self.logger.error(f"Failed to open serial port {port}: {e}")
+            self.ser = None
+
+    def _update_loop(self):
+        """背景循环读取电机位置"""
+        while not self._stop_event.is_set():
+            try:
+                self.get_position()
+            except Exception as e:
+                if self.debug:
+                    self.logger.error(f"Polling error: {e}")
+            time.sleep(1.0) # 每1秒刷新一次位置数据
+
+    def _send(self, func_code: int, payload: list) -> bytes:
+        """
+        发送指令并接收响应
+
+        Args:
+            func_code: 功能码
+            payload: 数据负载 (list of bytes)
+
+        Returns:
+            响应数据 (bytes)
+        """
+        if not self.ser:
+            self.logger.error("Serial port not available")
+            return b""
+
+        with self.lock:
+            # 清空输入缓冲区
+            self.ser.reset_input_buffer()
+
+            # 构建消息: [ID] [功能码] [数据...] [校验位=0x6B]
+            message = bytes([self.id, func_code] + payload + [0x6B])
+
+            # 发送
+            self.ser.write(message)
+
+            # 根据功能码决定响应长度
+            # 查询类指令返回 10 字节，控制类指令返回 4 字节
+            read_len = 10 if func_code in [0x31, 0x32, 0x35, 0x24, 0x27] else 4
+            response = self.ser.read(read_len)
+
+            # 调试输出
+            if self.debug:
+                sent_hex = message.hex().upper()
+                recv_hex = response.hex().upper() if response else 'TIMEOUT'
+                print(f"[ID {self.id}] TX: {sent_hex} → RX: {recv_hex}")
+
+            return response
+
+    def enable(self, on: bool = True) -> bool:
+        """
+        使能/禁用电机
+
+        Args:
+            on: True=使能(锁轴), False=禁用(松轴)
+
+        Returns:
+            是否成功
+        """
+        state = 1 if on else 0
+        resp = self._send(0xF3, [0xAB, state, 0])
+        return len(resp) >= 4
+
+    def move_speed(
+        self,
+        speed_rpm: int,
+        direction: str = "CW",
+        acceleration: int = 10
+    ) -> bool:
+        """
+        速度模式运行
+
+        Args:
+            speed_rpm: 转速 (RPM)
+            direction: 方向 ("CW"=顺时针, "CCW"=逆时针)
+            acceleration: 加速度 (0-255)
+
+        Returns:
+            是否成功
+        """
+        dir_val = 0 if direction.upper() in ["CW", "顺时针"] else 1
+        speed_bytes = struct.pack('>H', int(speed_rpm))
+        self.status = f"moving@{speed_rpm}rpm"
+        resp = self._send(0xF6, [dir_val, speed_bytes[0], speed_bytes[1], acceleration, 0])
+        return len(resp) >= 4
+
+    def move_position(
+        self,
+        pulses: int,
+        speed_rpm: int,
+        direction: str = "CW",
+        acceleration: int = 10,
+        absolute: bool = False
+    ) -> bool:
+        """
+        位置模式运行
+
+        Args:
+            pulses: 脉冲数
+            speed_rpm: 转速 (RPM)
+            direction: 方向 ("CW"=顺时针, "CCW"=逆时针)
+            acceleration: 加速度 (0-255)
+            absolute: True=绝对位置, False=相对位置
+
+        Returns:
+            是否成功
+        """
+        dir_val = 0 if direction.upper() in ["CW", "顺时针"] else 1
+        speed_bytes = struct.pack('>H', int(speed_rpm))
+        self.status = f"moving_to_{pulses}"
+        pulse_bytes = struct.pack('>I', int(pulses))
+        abs_flag = 1 if absolute else 0
+
+        payload = [
+            dir_val,
+            speed_bytes[0], speed_bytes[1],
+            acceleration,
+            pulse_bytes[0], pulse_bytes[1], pulse_bytes[2], pulse_bytes[3],
+            abs_flag,
+            0
+        ]
+
+        resp = self._send(0xFD, payload)
+        return len(resp) >= 4
+
+    def stop(self) -> bool:
+        """
+        停止电机
+
+        Returns:
+            是否成功
+        """
+        self.status = "idle"
+        resp = self._send(0xFE, [0x98, 0])
+        return len(resp) >= 4
+
+    def rotate_quarter(self, speed_rpm: int = 60, direction: str = "CW") -> bool:
+        """
+        电机旋转 1/4 圈 (阻塞式)
+        假设电机细分为 3200 脉冲/圈，1/4 圈 = 800 脉冲
+        """
+        pulses = 800
+        success = self.move_position(pulses=pulses, speed_rpm=speed_rpm, direction=direction, absolute=False)
+
+        if success:
+            # 计算预估旋转时间并进行阻塞等待 (Time = revolutions / (RPM/60))
+            # 1/4 rev / (RPM/60) = 15.0 / RPM
+            estimated_time = 15.0 / max(1, speed_rpm)
+            time.sleep(estimated_time + 0.5)  # 额外给 0.5 秒缓冲
+            self.status = "idle"
+
+        return success
+
+    def wait_time(self, duration_s: float) -> bool:
+        """
+        等待指定时间 (秒)
+        """
+        self.logger.info(f"Waiting for {duration_s} seconds...")
+        time.sleep(duration_s)
+        return True
+
+    def set_zero(self) -> bool:
+        """
+        清零当前位置
+
+        Returns:
+            是否成功
+        """
+        resp = self._send(0x0A, [])
+        return len(resp) >= 4
+
+    def get_position(self) -> Optional[int]:
+        """
+        读取当前位置 (脉冲数)
+
+        Returns:
+            当前位置脉冲数，失败返回 None
+        """
+        resp = self._send(0x32, [])
+
+        if len(resp) >= 8:
+            # 响应格式: [ID] [Func] [符号位] [数值4字节] [校验]
+            sign = resp[2]  # 0=正, 1=负
+            value = struct.unpack('>I', resp[3:7])[0]
+            self.position = -value if sign == 1 else value
+
+            if self.debug:
+                print(f"[Position] Raw: {resp.hex().upper()}, Parsed: {self.position}")
+
+            return self.position
+
+        self.logger.warning("Failed to read position")
+        return None
+
+    def close(self):
+        """关闭串口连接并停止线程"""
+        if hasattr(self, '_stop_event'):
+            self._stop_event.set()
+
+        if self.ser and self.ser.is_open:
+            self.ser.close()
+            self.logger.info("Serial port closed")
+
+
+# ============================================================
+# 测试和调试代码
+# ============================================================
+
+def test_motor():
+    """基础功能测试"""
+    logging.basicConfig(level=logging.INFO)
+
+    print("="*60)
+    print("ZDT X42 电机驱动测试")
+    print("="*60)
+
+    driver = ZDTX42Driver(
+        port="/dev/tty.usbserial-3110",
+        baudrate=115200,
+        device_id=2,
+        debug=True
+    )
+
+    if not driver.ser:
+        print("❌ 串口打开失败")
+        return
+
+    try:
+        # 测试 1: 读取位置
+        print("\n[1] 读取当前位置")
+        pos = driver.get_position()
+        print(f"✓ 当前位置: {pos} 脉冲")
+
+        # 测试 2: 使能
+        print("\n[2] 使能电机")
+        driver.enable(True)
+        time.sleep(0.3)
+        print("✓ 电机已锁定")
+
+        # 测试 3: 相对位置运动
+        print("\n[3] 相对位置运动 (1000脉冲)")
+        driver.move_position(pulses=1000, speed_rpm=60, direction="CW")
+        time.sleep(2)
+        pos = driver.get_position()
+        print(f"✓ 新位置: {pos}")
+
+        # 测试 4: 速度运动
+        print("\n[4] 速度模式 (30RPM, 3秒)")
+        driver.move_speed(speed_rpm=30, direction="CW")
+        time.sleep(3)
+        driver.stop()
+        pos = driver.get_position()
+        print(f"✓ 停止后位置: {pos}")
+
+        # 测试 5: 禁用
+        print("\n[5] 禁用电机")
+        driver.enable(False)
+        print("✓ 电机已松开")
+
+        print("\n" + "="*60)
+        print("✅ 测试完成")
+        print("="*60)
+
+    except Exception as e:
+        print(f"\n❌ 测试失败: {e}")
+        import traceback
+        traceback.print_exc()
+    finally:
+        driver.close()
+
+
+if __name__ == "__main__":
+    test_motor()

unilabos/devices/separator/chinwe.py

@@ -623,6 +623,119 @@ class ChinweDevice(UniversalDriver):
         time.sleep(duration)
         return True
 
+    def separation_step(self, motor_id: int = 5, speed: int = 60, pulses: int = 700,
+                       max_cycles: int = 0, timeout: int = 300) -> bool:
+        """
+        分液步骤 - 液位传感器与电机联动
+        当液位传感器检测到"有液"时,电机顺时针旋转指定脉冲数
+        当液位传感器检测到"无液"时,电机逆时针旋转指定脉冲数
+
+        :param motor_id: 电机ID (必须在初始化时配置的motor_ids中)
+        :param speed: 电机转速 (RPM)
+        :param pulses: 每次旋转的脉冲数 (默认700约为1/4圈,假设3200脉冲/圈)
+        :param max_cycles: 最大执行循环次数 (0=无限制,默认0)
+        :param timeout: 整体超时时间 (秒)
+        :return: 成功返回True,超时或失败返回False
+        """
+        motor_id = int(motor_id)
+        speed = int(speed)
+        pulses = int(pulses)
+        max_cycles = int(max_cycles)
+        timeout = int(timeout)
+
+        # 检查电机是否存在
+        if motor_id not in self.motors:
+            self.logger.error(f"Motor {motor_id} not found in configured motors: {list(self.motors.keys())}")
+            return False
+
+        # 检查传感器是否可用
+        if not self.sensor:
+            self.logger.error("Sensor not initialized")
+            return False
+
+        motor = self.motors[motor_id]
+
+        # 停止轮询线程，避免与 separation_step 同时读取传感器造成串口冲突
+        self.logger.info("Stopping polling thread for separation_step...")
+        self._stop_event.set()
+        if self._poll_thread and self._poll_thread.is_alive():
+            self._poll_thread.join(timeout=2.0)
+
+        # 使能电机
+        self.logger.info(f"Enabling motor {motor_id}...")
+        motor.enable(True)
+        time.sleep(0.2)
+
+        self.logger.info(f"Starting separation step: motor_id={motor_id}, speed={speed} RPM, "
+                        f"pulses={pulses}, max_cycles={max_cycles}, timeout={timeout}s")
+
+        # 记录上一次的液位状态
+        last_level = None
+        cycle_count = 0
+        start_time = time.time()
+        error_count = 0
+
+        try:
+            while True:
+                # 检查超时
+                if time.time() - start_time > timeout:
+                    self.logger.warning(f"Separation step timeout after {timeout} seconds")
+                    return False
+
+                # 检查循环次数限制
+                if max_cycles > 0 and cycle_count >= max_cycles:
+                    self.logger.info(f"Separation step completed: reached max_cycles={max_cycles}")
+                    return True
+
+                # 读取传感器数据
+                data = self.sensor.read_level()
+
+                if data is None:
+                    error_count += 1
+                    if error_count > 5:
+                        self.logger.warning("Sensor read failed multiple times, retrying...")
+                        error_count = 0
+                    time.sleep(0.5)
+                    continue
+
+                error_count = 0
+                current_level = data['level']
+                rssi = data['rssi']
+
+                # 检测状态变化 (包括首次检测)
+                if current_level != last_level:
+                    cycle_count += 1
+
+                    if current_level:
+                        # 有液 -> 电机顺时针旋转
+                        self.logger.info(f"[Cycle {cycle_count}] Liquid detected (RSSI={rssi}), "
+                                       f"rotating motor {motor_id} clockwise {pulses} pulses")
+                        motor.run_position(pulses=pulses, speed_rpm=speed, direction=0, absolute=False)
+
+                        # 等待电机完成 (预估时间)
+                        estimated_time = 15.0 / max(1, speed)
+                        time.sleep(estimated_time + 0.5)
+
+                    else:
+                        # 无液 -> 电机逆时针旋转
+                        self.logger.info(f"[Cycle {cycle_count}] No liquid detected (RSSI={rssi}), "
+                                       f"rotating motor {motor_id} counter-clockwise {pulses} pulses")
+                        motor.run_position(pulses=pulses, speed_rpm=speed, direction=1, absolute=False)
+
+                        # 等待电机完成 (预估时间)
+                        estimated_time = 15.0 / max(1, speed)
+                        time.sleep(estimated_time + 0.5)
+
+                # 更新状态
+                last_level = current_level
+
+                # 轮询间隔
+                time.sleep(0.1)
+        finally:
+            # 恢复轮询线程
+            self.logger.info("Restarting polling thread...")
+            self._start_polling()
+
     def execute_command_from_outer(self, command_dict: Dict[str, Any]) -> bool:
         """支持标准 JSON 指令调用"""
         return super().execute_command_from_outer(command_dict)

unilabos/devices/separator/xkc_sensor.py

@@ -0,0 +1,379 @@
+# -*- coding: utf-8 -*-
+"""
+XKC RS485 液位传感器 (Modbus RTU)
+
+说明:
+    1. 遵循 Modbus-RTU 协议。
+    2. 数据寄存器: 0x0001 (液位状态, 1=有液, 0=无液), 0x0002 (RSSI 信号强度)。
+    3. 地址寄存器: 0x0004 (可读写, 范围 1-254)。
+    4. 波特率寄存器: 0x0005 (可写, 代码表见 change_baudrate 方法)。
+"""
+
+import struct
+import threading
+import time
+import logging
+import serial
+from typing import Optional, Dict, Any, List
+
+from unilabos.device_comms.universal_driver import UniversalDriver
+
+class TransportManager:
+    """
+    统一通信管理类。
+    仅支持 串口 (Serial/有线) 连接。
+    """
+    def __init__(self, port: str, baudrate: int = 9600, timeout: float = 3.0, logger=None):
+        self.port = port
+        self.baudrate = baudrate
+        self.timeout = timeout
+        self.logger = logger
+        self.lock = threading.RLock() # 线程锁，确保多设备共用一个连接时不冲突
+
+        self.serial = None
+        self._connect_serial()
+
+    def _connect_serial(self):
+        try:
+            self.serial = serial.Serial(
+                port=self.port,
+                baudrate=self.baudrate,
+                timeout=self.timeout
+            )
+        except Exception as e:
+            raise ConnectionError(f"Serial open failed: {e}")
+
+    def close(self):
+        """关闭连接"""
+        if self.serial and self.serial.is_open:
+            self.serial.close()
+
+    def clear_buffer(self):
+        """清空缓冲区 (Thread-safe)"""
+        with self.lock:
+            if self.serial:
+                self.serial.reset_input_buffer()
+
+    def write(self, data: bytes):
+        """发送原始字节"""
+        with self.lock:
+            if self.serial:
+                self.serial.write(data)
+
+    def read(self, size: int) -> bytes:
+        """读取指定长度字节"""
+        if self.serial:
+            return self.serial.read(size)
+        return b''
+
+class XKCSensorDriver(UniversalDriver):
+    """XKC RS485 液位传感器 (Modbus RTU)"""
+
+    def __init__(self, port: str, baudrate: int = 9600, device_id: int = 6,
+                 threshold: int = 300, timeout: float = 3.0, debug: bool = False):
+        super().__init__()
+        self.port = port
+        self.baudrate = baudrate
+        self.device_id = device_id
+        self.threshold = threshold
+        self.timeout = timeout
+        self.debug = debug
+        self.level = False
+        self.rssi = 0
+        self.status = {"level": self.level, "rssi": self.rssi}
+
+        try:
+            self.transport = TransportManager(port, baudrate, timeout, logger=self.logger)
+            self.logger.info(f"XKCSensorDriver connected to {port} (ID: {device_id})")
+        except Exception as e:
+            self.logger.error(f"Failed to connect XKCSensorDriver: {e}")
+            self.transport = None
+
+        # 启动背景轮询线程，确保 status 实时刷新
+        self._stop_event = threading.Event()
+        self._polling_thread = threading.Thread(
+            target=self._update_loop,
+            name=f"XKCPolling_{port}",
+            daemon=True
+        )
+        if self.transport:
+            self._polling_thread.start()
+
+    def _update_loop(self):
+        """背景循环读取传感器数据"""
+        while not self._stop_event.is_set():
+            try:
+                self.read_level()
+            except Exception as e:
+                if self.debug:
+                    self.logger.error(f"Polling error: {e}")
+            time.sleep(2.0) # 每2秒刷新一次数据
+
+    def _crc(self, data: bytes) -> bytes:
+        crc = 0xFFFF
+        for byte in data:
+            crc ^= byte
+            for _ in range(8):
+                if crc & 0x0001: crc = (crc >> 1) ^ 0xA001
+                else: crc >>= 1
+        return struct.pack('<H', crc)
+
+    def read_level(self) -> Optional[Dict[str, Any]]:
+        """
+        读取液位。
+        返回: {'level': bool, 'rssi': int}
+        """
+        if not self.transport:
+            return None
+
+        with self.transport.lock:
+            self.transport.clear_buffer()
+            # Modbus Read Registers: 01 03 00 01 00 02 CRC
+            payload = struct.pack('>HH', 0x0001, 0x0002)
+            msg = struct.pack('BB', self.device_id, 0x03) + payload
+            msg += self._crc(msg)
+
+            if self.debug:
+                self.logger.info(f"TX (ID {self.device_id}): {msg.hex().upper()}")
+
+            self.transport.write(msg)
+
+            # Read header
+            h = self.transport.read(3) # Addr, Func, Len
+            if self.debug:
+                self.logger.info(f"RX Header: {h.hex().upper()}")
+
+            if len(h) < 3: return None
+            length = h[2]
+
+            # Read body + CRC
+            body = self.transport.read(length + 2)
+            if self.debug:
+                self.logger.info(f"RX Body+CRC: {body.hex().upper()}")
+            if len(body) < length + 2:
+                # Firmware bug fix specific to some modules
+                if len(body) == 4 and length == 4:
+                    pass
+                else:
+                    return None
+
+            data = body[:-2]
+            # 根据手册说明:
+            # 寄存器 0x0001 (data[0:2]): 液位状态 (00 01 为有液, 00 00 为无液)
+            # 寄存器 0x0002 (data[2:4]): 信号强度 RSSI
+
+            hw_level = False
+            rssi = 0
+
+            if len(data) >= 4:
+                hw_level = ((data[0] << 8) | data[1]) == 1
+                rssi = (data[2] << 8) | data[3]
+            elif len(data) == 2:
+                # 兼容模式: 某些老固件可能只返回 1 个寄存器
+                rssi = (data[0] << 8) | data[1]
+                hw_level = rssi > self.threshold
+            else:
+                return None
+
+            # 最终判定: 优先使用硬件层级的 level 判定，但 RSSI 阈值逻辑作为补充/校验
+            # 注意: 如果用户显式设置了 THRESHOLD，我们可以在逻辑中做权衡
+            self.level = hw_level or (rssi > self.threshold)
+            self.rssi = rssi
+            result = {
+                'level': self.level,
+                'rssi': self.rssi
+            }
+            self.status = result
+            return result
+
+    def wait_level(self, target_state: bool, timeout: float = 60.0) -> bool:
+        """
+        等待液位达到目标状态 (阻塞式)
+        """
+        self.logger.info(f"Waiting for level: {target_state}")
+        start_time = time.time()
+        while (time.time() - start_time) < timeout:
+            res = self.read_level()
+            if res and res.get('level') == target_state:
+                return True
+            time.sleep(0.5)
+        self.logger.warning(f"Wait level timeout ({timeout}s)")
+        return False
+
+    def wait_for_liquid(self, target_state: bool, timeout: float = 120.0) -> bool:
+        """
+        实时检测电导率(RSSI)并等待用户指定的“有液”或“无液”状态。
+        一旦检测到符合目标状态，立即返回。
+
+        Args:
+            target_state: True 为“有液”, False 为“无液”
+            timeout: 最大等待时间(秒)
+        """
+        state_str = "有液" if target_state else "无液"
+        self.logger.info(f"开始实时检测电导率，等待状态: {state_str} (超时: {timeout}s)")
+
+        start_time = time.time()
+        while (time.time() - start_time) < timeout:
+            res = self.read_level() # 内部已更新 self.level 和 self.rssi
+            if res:
+                current_level = res.get('level')
+                current_rssi = res.get('rssi')
+                if current_level == target_state:
+                    self.logger.info(f"✅ 检测到目标状态: {state_str} (当前电导率/RSSI: {current_rssi})")
+                    return True
+
+                if self.debug:
+                    self.logger.debug(f"当前状态: {'有液' if current_level else '无液'}, RSSI: {current_rssi}")
+
+            time.sleep(0.2) # 高频采样
+
+        self.logger.warning(f"❌ 等待 {state_str} 状态超时 ({timeout}s)")
+        return False
+
+    def set_threshold(self, threshold: int):
+        """设置液位判定阈值"""
+        self.threshold = int(threshold)
+        self.logger.info(f"Threshold updated to: {self.threshold}")
+
+    def change_device_id(self, new_id: int) -> bool:
+        """
+        修改设备的 Modbus 从站地址。
+        寄存器: 0x0004, 功能码: 0x06
+        """
+        if not (1 <= new_id <= 254):
+            self.logger.error(f"Invalid device ID: {new_id}. Must be 1-254.")
+            return False
+
+        self.logger.info(f"Changing device ID from {self.device_id} to {new_id}")
+        success = self._write_single_register(0x0004, new_id)
+        if success:
+            self.device_id = new_id # 更新内存中的地址
+            self.logger.info(f"Device ID update command sent successfully (target {new_id}).")
+        return success
+
+    def change_baudrate(self, baud_code: int) -> bool:
+        """
+        更改通讯波特率 (寄存器: 0x0005)。
+        设置成功后传感器 LED 会闪烁，通常无数据返回。
+
+        波特率代码对照表 (16进制):
+        05: 2400
+        06: 4800
+        07: 9600 (默认)
+        08: 14400
+        09: 19200
+        0A: 28800
+        0C: 57600
+        0D: 115200
+        0E: 128000
+        0F: 256000
+        """
+        self.logger.info(f"Sending baudrate change command (Code: {baud_code:02X})")
+        # 写入寄存器 0x0005
+        self._write_single_register(0x0005, baud_code)
+        self.logger.info("Baudrate change command executed. Device LED should flash. Please update connection settings.")
+        return True
+
+    def factory_reset(self) -> bool:
+        """
+        恢复出厂设置 (通过广播地址 FF)。
+        设置地址为 01，逻辑为向 0x0004 写入 0x0002
+        """
+        self.logger.info("Sending factory reset command via broadcast address FF...")
+        # 广播指令通常无回显
+        self._write_single_register(0x0004, 0x0002, slave_id=0xFF)
+        self.logger.info("Factory reset command sent. Device address should be 01 now.")
+        return True
+
+    def _write_single_register(self, reg_addr: int, value: int, slave_id: Optional[int] = None) -> bool:
+        """内部辅助函数: Modbus 功能码 06 写单个寄存器"""
+        if not self.transport: return False
+
+        target_id = slave_id if slave_id is not None else self.device_id
+        msg = struct.pack('BBHH', target_id, 0x06, reg_addr, value)
+        msg += self._crc(msg)
+
+        with self.transport.lock:
+            self.transport.clear_buffer()
+            if self.debug:
+                self.logger.info(f"TX Write (Reg {reg_addr:#06x}): {msg.hex().upper()}")
+
+            self.transport.write(msg)
+
+            # 广播地址、波特率修改或厂家特定指令可能无回显
+            if target_id == 0xFF or reg_addr == 0x0005:
+                time.sleep(0.5)
+                return True
+
+            # 等待返回 (正常应返回相同报文)
+            resp = self.transport.read(len(msg))
+            if self.debug:
+                self.logger.info(f"RX Write Response: {resp.hex().upper()}")
+
+            return resp == msg
+
+    def close(self):
+        if self.transport:
+            self.transport.close()
+
+if __name__ == "__main__":
+    # 快速实例化测试
+    import logging
+    # 减少冗余日志，仅显示重要信息
+    logging.basicConfig(level=logging.INFO, format='%(levelname)s: %(message)s')
+
+    # 硬件配置 (根据实际情况修改)
+    TEST_PORT = "/dev/tty.usbserial-3110"
+    SLAVE_ID = 1
+    THRESHOLD = 300
+
+    print("\n" + "="*50)
+    print(f"  XKC RS485 传感器独立测试程序")
+    print(f"  端口: {TEST_PORT} | 地址: {SLAVE_ID} | 阈值: {THRESHOLD}")
+    print("="*50)
+
+    sensor = XKCSensorDriver(port=TEST_PORT, device_id=SLAVE_ID, threshold=THRESHOLD, debug=False)
+
+    try:
+        if sensor.transport:
+            print(f"\n开始实时连续采样测试 (持续 15 秒)...")
+            print(f"按 Ctrl+C 可提前停止\n")
+
+            start_time = time.time()
+            duration = 15
+            count = 0
+
+            while time.time() - start_time < duration:
+                count += 1
+                res = sensor.read_level()
+                if res:
+                    rssi = res['rssi']
+                    level = res['level']
+                    status_str = "【有液】" if level else "【无液】"
+                    # 使用 \r 实现单行刷新显示 (或者不刷，直接打印历史)
+                    # 为了方便查看变化，我们直接打印
+                    elapsed = time.time() - start_time
+                    print(f" [{elapsed:4.1f}s] 采样 {count:<3}: 电导率/RSSI = {rssi:<5} | 判定结果: {status_str}")
+                else:
+                    print(f" [{time.time()-start_time:4.1f}s] 采样 {count:<3}: 通信失败 (无响应)")
+
+                time.sleep(0.5) # 每秒采样 2 次
+
+            print(f"\n--- 15 秒采样测试完成 (总计 {count} 次) ---")
+
+            # [3] 测试动态修改阈值
+            print(f"\n[3] 动态修改阈值演示...")
+            new_threshold = 400
+            sensor.set_threshold(new_threshold)
+            res = sensor.read_level()
+            if res:
+                print(f"  采样 (当前阈值={new_threshold}): 电导率/RSSI = {res['rssi']:<5} | 判定结果: {'【有液】' if res['level'] else '【无液】'}")
+            sensor.set_threshold(THRESHOLD) # 还原
+
+    except KeyboardInterrupt:
+        print("\n[!] 用户中断测试")
+    except Exception as e:
+        print(f"\n[!] 测试运行出错: {e}")
+    finally:
+        sensor.close()
+        print("\n--- 测试程序已退出 ---\n")

unilabos/devices/workstation/bioyond_studio/station.py

@@ -258,7 +258,7 @@ class BioyondResourceSynchronizer(ResourceSynchronizer):
                 logger.info(f"[同步→Bioyond] ➕ 物料不存在于 Bioyond，将创建新物料并入库")
 
             # 第1步：从配置中获取仓库配置
-            warehouse_mapping = self.bioyond_config.get("warehouse_mapping", {})
+            warehouse_mapping = self.workstation.bioyond_config.get("warehouse_mapping", {})
 
             # 确定目标仓库名称
             parent_name = None

unilabos/registry/device_comms/communication_devices.yaml

@@ -96,10 +96,13 @@ serial:
           type: string
         port:
           type: string
+        registry_name:
+          type: string
         resource_tracker:
           type: object
       required:
       - device_id
+      - registry_name
       - port
       type: object
     data:

unilabos/registry/devices/camera.yaml

@@ -67,6 +67,9 @@ camera:
         period:
           default: 0.1
           type: number
+        registry_name:
+          default: ''
+          type: string
         resource_tracker:
           type: object
       required: []

unilabos/registry/devices/chinwe.yaml

@@ -317,6 +317,47 @@ separator.chinwe:
               - port
               type: object
         type: UniLabJsonCommand
+      separation_step:
+        goal:
+          max_cycles: 0
+          motor_id: 5
+          pulses: 700
+          speed: 60
+          timeout: 300
+        handles: {}
+        schema:
+          description: 分液步骤 - 液位传感器与电机联动 (有液→顺时针, 无液→逆时针)
+          properties:
+            goal:
+              properties:
+                max_cycles:
+                  default: 0
+                  description: 最大循环次数 (0=无限制)
+                  type: integer
+                motor_id:
+                  default: '5'
+                  description: 选择电机
+                  enum:
+                  - '4'
+                  - '5'
+                  title: '注: 4=搅拌, 5=旋钮'
+                  type: string
+                pulses:
+                  default: 700
+                  description: 每次旋转脉冲数 (约1/4圈)
+                  type: integer
+                speed:
+                  default: 60
+                  description: 电机转速 (RPM)
+                  type: integer
+                timeout:
+                  default: 300
+                  description: 超时时间 (秒)
+                  type: integer
+              required:
+              - motor_id
+              type: object
+        type: UniLabJsonCommand
       wait_sensor_level:
         goal:
           target_state: 有液

unilabos/registry/devices/motor.yaml

@@ -0,0 +1,286 @@
+motor.zdt_x42:
+  category:
+  - motor
+  class:
+    action_value_mappings:
+      auto-enable:
+        feedback: {}
+        goal: {}
+        goal_default:
+          'on': true
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 使能或禁用电机。使能后电机进入锁轴状态，可接收运动指令；禁用后电机进入松轴状态。
+          properties:
+            feedback: {}
+            goal:
+              properties:
+                'on':
+                  default: true
+                  type: boolean
+              required: []
+              type: object
+            result: {}
+          required:
+          - goal
+          title: enable参数
+          type: object
+        type: UniLabJsonCommand
+      auto-get_position:
+        feedback: {}
+        goal: {}
+        goal_default: {}
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 获取当前电机脉冲位置。
+          properties:
+            feedback: {}
+            goal:
+              properties: {}
+              required: []
+              type: object
+            result:
+              properties:
+                position:
+                  type: integer
+              type: object
+          required:
+          - goal
+          title: get_position参数
+          type: object
+        type: UniLabJsonCommand
+      auto-move_position:
+        feedback: {}
+        goal: {}
+        goal_default:
+          absolute: false
+          acceleration: 10
+          direction: CW
+          pulses: 1000
+          speed_rpm: 60
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 位置模式运行。控制电机移动到指定脉冲位置或相对于当前位置移动指定脉冲数。
+          properties:
+            feedback: {}
+            goal:
+              properties:
+                absolute:
+                  default: false
+                  type: boolean
+                acceleration:
+                  default: 10
+                  maximum: 255
+                  minimum: 0
+                  type: integer
+                direction:
+                  default: CW
+                  enum:
+                  - CW
+                  - CCW
+                  type: string
+                pulses:
+                  default: 1000
+                  type: integer
+                speed_rpm:
+                  default: 60
+                  minimum: 0
+                  type: integer
+              required:
+              - pulses
+              - speed_rpm
+              type: object
+            result: {}
+          required:
+          - goal
+          title: move_position参数
+          type: object
+        type: UniLabJsonCommand
+      auto-move_speed:
+        feedback: {}
+        goal: {}
+        goal_default:
+          acceleration: 10
+          direction: CW
+          speed_rpm: 60
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 速度模式运行。控制电机以指定转速和方向持续转动。
+          properties:
+            feedback: {}
+            goal:
+              properties:
+                acceleration:
+                  default: 10
+                  maximum: 255
+                  minimum: 0
+                  type: integer
+                direction:
+                  default: CW
+                  enum:
+                  - CW
+                  - CCW
+                  type: string
+                speed_rpm:
+                  default: 60
+                  minimum: 0
+                  type: integer
+              required:
+              - speed_rpm
+              type: object
+            result: {}
+          required:
+          - goal
+          title: move_speed参数
+          type: object
+        type: UniLabJsonCommand
+      auto-rotate_quarter:
+        feedback: {}
+        goal: {}
+        goal_default:
+          direction: CW
+          speed_rpm: 60
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 电机旋转 1/4 圈 (阻塞式)。
+          properties:
+            feedback: {}
+            goal:
+              properties:
+                direction:
+                  default: CW
+                  enum:
+                  - CW
+                  - CCW
+                  type: string
+                speed_rpm:
+                  default: 60
+                  minimum: 1
+                  type: integer
+              required: []
+              type: object
+            result: {}
+          required:
+          - goal
+          title: rotate_quarter参数
+          type: object
+        type: UniLabJsonCommand
+      auto-set_zero:
+        feedback: {}
+        goal: {}
+        goal_default: {}
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 将当前电机位置设为零点。
+          properties:
+            feedback: {}
+            goal:
+              properties: {}
+              required: []
+              type: object
+            result: {}
+          required:
+          - goal
+          title: set_zero参数
+          type: object
+        type: UniLabJsonCommand
+      auto-stop:
+        feedback: {}
+        goal: {}
+        goal_default: {}
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 立即停止电机运动。
+          properties:
+            feedback: {}
+            goal:
+              properties: {}
+              required: []
+              type: object
+            result: {}
+          required:
+          - goal
+          title: stop参数
+          type: object
+        type: UniLabJsonCommand
+      auto-wait_time:
+        feedback: {}
+        goal: {}
+        goal_default:
+          duration_s: 1.0
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: 等待指定时间 (秒)。
+          properties:
+            feedback: {}
+            goal:
+              properties:
+                duration_s:
+                  default: 1.0
+                  minimum: 0
+                  type: number
+              required:
+              - duration_s
+              type: object
+            result: {}
+          required:
+          - goal
+          title: wait_time参数
+          type: object
+        type: UniLabJsonCommand
+    module: unilabos.devices.motor.ZDT_X42:ZDTX42Driver
+    status_types:
+      position: int
+      status: str
+    type: python
+  config_info: []
+  description: ZDT X42 闭环步进电机驱动。支持速度运行、精确位置控制、位置查询和清零功能。适用于各种需要精确运动控制的实验室自动化场景。
+  handles: []
+  icon: ''
+  init_param_schema:
+    config:
+      properties:
+        baudrate:
+          default: 115200
+          type: integer
+        debug:
+          default: false
+          type: boolean
+        device_id:
+          default: 1
+          type: integer
+        port:
+          type: string
+        timeout:
+          default: 0.5
+          type: number
+      required:
+      - port
+      type: object
+    data:
+      properties:
+        position:
+          type: integer
+        status:
+          type: string
+      required:
+      - status
+      - position
+      type: object
+  version: 1.0.0

unilabos/registry/devices/sensor.yaml

@@ -0,0 +1,148 @@
+sensor.xkc_rs485:
+  category:
+  - sensor
+  - separator
+  class:
+    action_value_mappings:
+      auto-change_baudrate:
+        goal:
+          baud_code: 7
+        handles: {}
+        schema:
+          description: '更改通讯波特率 (设置成功后无返回，且需手动切换波特率重连)。代码表 (16进制): 05=2400, 06=4800,
+            07=9600, 08=14400, 09=19200, 0A=28800, 0C=57600, 0D=115200, 0E=128000,
+            0F=256000'
+          properties:
+            goal:
+              properties:
+                baud_code:
+                  description: '波特率代码 (例如: 7 为 9600, 13 即 0x0D 为 115200)'
+                  type: integer
+              required:
+              - baud_code
+              type: object
+        type: UniLabJsonCommand
+      auto-change_device_id:
+        goal:
+          new_id: 1
+        handles: {}
+        schema:
+          description: 修改传感器的 Modbus 从站地址
+          properties:
+            goal:
+              properties:
+                new_id:
+                  description: 新的从站地址 (1-254)
+                  maximum: 254
+                  minimum: 1
+                  type: integer
+              required:
+              - new_id
+              type: object
+        type: UniLabJsonCommand
+      auto-factory_reset:
+        goal: {}
+        handles: {}
+        schema:
+          description: 恢复出厂设置 (地址重置为 01)
+          properties:
+            goal:
+              type: object
+        type: UniLabJsonCommand
+      auto-read_level:
+        goal: {}
+        handles: {}
+        schema:
+          description: 直接读取当前液位及信号强度
+          properties:
+            goal:
+              type: object
+          type: object
+        type: UniLabJsonCommand
+      auto-set_threshold:
+        goal:
+          threshold: 300
+        handles: {}
+        schema:
+          description: 设置液位判定阈值
+          properties:
+            goal:
+              properties:
+                threshold:
+                  type: integer
+              required:
+              - threshold
+              type: object
+        type: UniLabJsonCommand
+      auto-wait_for_liquid:
+        goal:
+          target_state: true
+          timeout: 120
+        handles: {}
+        schema:
+          description: 实时检测电导率(RSSI)并等待用户指定的状态
+          properties:
+            goal:
+              properties:
+                target_state:
+                  default: true
+                  description: 目标状态 (True=有液, False=无液)
+                  type: boolean
+                timeout:
+                  default: 120
+                  description: 超时时间 (秒)
+              required:
+              - target_state
+              type: object
+        type: UniLabJsonCommand
+      auto-wait_level:
+        goal:
+          level: true
+          timeout: 10
+        handles: {}
+        schema:
+          description: 等待液位达到目标状态
+          properties:
+            goal:
+              properties:
+                level:
+                  type: boolean
+                timeout:
+                  type: number
+              required:
+              - level
+              type: object
+        type: UniLabJsonCommand
+    module: unilabos.devices.separator.xkc_sensor:XKCSensorDriver
+    status_types:
+      level: bool
+      rssi: int
+    type: python
+  config_info: []
+  description: XKC RS485 非接触式液位传感器 (Modbus RTU)
+  handles: []
+  icon: ''
+  init_param_schema:
+    config:
+      properties:
+        baudrate:
+          default: 9600
+          type: integer
+        debug:
+          default: false
+          type: boolean
+        device_id:
+          default: 1
+          type: integer
+        port:
+          type: string
+        threshold:
+          default: 300
+          type: integer
+        timeout:
+          default: 3.0
+          type: number
+      required:
+      - port
+      type: object
+  version: 1.0.0

unilabos/registry/registry.py

@@ -5,6 +5,7 @@ import sys
 import inspect
 import importlib
 import threading
+import traceback
 from concurrent.futures import ThreadPoolExecutor, as_completed
 from pathlib import Path
 from typing import Any, Dict, List, Union, Tuple
@@ -88,6 +89,14 @@ class Registry:
         )
         test_latency_schema["description"] = "用于测试延迟的动作，返回延迟时间和时间差。"
 
+        test_resource_method_info = host_node_enhanced_info.get("action_methods", {}).get("test_resource", {})
+        test_resource_schema = self._generate_unilab_json_command_schema(
+            test_resource_method_info.get("args", []),
+            "test_resource",
+            test_resource_method_info.get("return_annotation"),
+        )
+        test_resource_schema["description"] = "用于测试物料、设备和样本。"
+
         self.device_type_registry.update(
             {
                 "host_node": {
@@ -166,7 +175,8 @@ class Registry:
                                     "res_id": "unilabos_resources",  # 将当前实验室的全部物料id作为下拉框可选择
                                     "device_id": "unilabos_devices",  # 将当前实验室的全部设备id作为下拉框可选择
                                     "parent": "unilabos_nodes",  # 将当前实验室的设备/物料作为下拉框可选择
-                                    "class_name": "unilabos_class",
+                                    "class_name": "unilabos_class",  # 当前实验室物料的class name
+                                    "slot_on_deck": "unilabos_resource_slot:parent",  # 勾选的parent的config中的sites的name，展示name，参数对应slot（index）
                                 },
                             },
                             "test_latency": {
@@ -189,32 +199,7 @@ class Registry:
                                 "goal": {},
                                 "feedback": {},
                                 "result": {},
-                                "schema": {
-                                    "description": "",
-                                    "properties": {
-                                        "feedback": {},
-                                        "goal": {
-                                            "properties": {
-                                                "resource": ros_message_to_json_schema(Resource, "resource"),
-                                                "resources": {
-                                                    "items": {
-                                                        "properties": ros_message_to_json_schema(
-                                                            Resource, "resources"
-                                                        ),
-                                                        "type": "object",
-                                                    },
-                                                    "type": "array",
-                                                },
-                                                "device": {"type": "string"},
-                                                "devices": {"items": {"type": "string"}, "type": "array"},
-                                            },
-                                            "type": "object",
-                                        },
-                                        "result": {},
-                                    },
-                                    "title": "test_resource",
-                                    "type": "object",
-                                },
+                                "schema": test_resource_schema,
                                 "placeholder_keys": {
                                     "device": "unilabos_devices",
                                     "devices": "unilabos_devices",
@@ -944,6 +929,7 @@ class Registry:
                     if is_valid:
                         results.append((file, data, device_ids))
                 except Exception as e:
+                    traceback.print_exc()
                     logger.warning(f"[UniLab Registry] 处理设备文件异常: {file}, 错误: {e}")
 
         # 线程安全地更新注册表

unilabos/registry/resources/bioyond/bottle_carriers.yaml

@@ -46,3 +46,16 @@ BIOYOND_PolymerStation_8StockCarrier:
   init_param_schema: {}
   registry_type: resource
   version: 1.0.0
+BIOYOND_PolymerStation_TipBox:
+  category:
+  - bottle_carriers
+  - tip_racks
+  class:
+    module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_TipBox
+    type: pylabrobot
+  description: BIOYOND_PolymerStation_TipBox (4x6布局，24个枪头孔位)
+  handles: []
+  icon: ''
+  init_param_schema: {}
+  registry_type: resource
+  version: 1.0.0

unilabos/registry/resources/bioyond/bottles.yaml

@@ -82,14 +82,3 @@ BIOYOND_PolymerStation_Solution_Beaker:
   icon: ''
   init_param_schema: {}
   version: 1.0.0
-BIOYOND_PolymerStation_TipBox:
-  category:
-  - bottles
-  - tip_boxes
-  class:
-    module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_TipBox
-    type: pylabrobot
-  handles: []
-  icon: ''
-  init_param_schema: {}
-  version: 1.0.0

unilabos/resources/bioyond/bottle_carriers.py

@@ -1,4 +1,4 @@
-from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
+from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d, Container
 
 from unilabos.resources.itemized_carrier import BottleCarrier
 from unilabos.resources.bioyond.bottles import (
@@ -9,6 +9,28 @@ from unilabos.resources.bioyond.bottles import (
     BIOYOND_PolymerStation_Reagent_Bottle,
     BIOYOND_PolymerStation_Flask,
 )
+
+
+def BIOYOND_PolymerStation_Tip(name: str, size_x: float = 8.0, size_y: float = 8.0, size_z: float = 50.0) -> Container:
+    """创建单个枪头资源
+
+    Args:
+        name: 枪头名称
+        size_x: 枪头宽度 (mm)
+        size_y: 枪头长度 (mm)
+        size_z: 枪头高度 (mm)
+
+    Returns:
+        Container: 枪头容器
+    """
+    return Container(
+        name=name,
+        size_x=size_x,
+        size_y=size_y,
+        size_z=size_z,
+        category="tip",
+        model="BIOYOND_PolymerStation_Tip",
+    )
 # 命名约定：试剂瓶-Bottle，烧杯-Beaker，烧瓶-Flask,小瓶-Vial
 
 
@@ -322,3 +344,88 @@ def BIOYOND_Electrolyte_1BottleCarrier(name: str) -> BottleCarrier:
     carrier.num_items_z = 1
     carrier[0] = BIOYOND_PolymerStation_Solution_Beaker(f"{name}_beaker_1")
     return carrier
+
+
+def BIOYOND_PolymerStation_TipBox(
+    name: str,
+    size_x: float = 127.76,  # 枪头盒宽度
+    size_y: float = 85.48,   # 枪头盒长度
+    size_z: float = 100.0,   # 枪头盒高度
+    barcode: str = None,
+) -> BottleCarrier:
+    """创建4×6枪头盒 (24个枪头) - 使用 BottleCarrier 结构
+
+    Args:
+        name: 枪头盒名称
+        size_x: 枪头盒宽度 (mm)
+        size_y: 枪头盒长度 (mm)
+        size_z: 枪头盒高度 (mm)
+        barcode: 条形码
+
+    Returns:
+        BottleCarrier: 包含24个枪头孔位的枪头盒载架
+
+    布局说明:
+        - 4行×6列 (A-D, 1-6)
+        - 枪头孔位间距: 18mm (x方向) × 18mm (y方向)
+        - 起始位置居中对齐
+        - 索引顺序: 列优先 (0=A1, 1=B1, 2=C1, 3=D1, 4=A2, ...)
+    """
+    # 枪头孔位参数
+    num_cols = 6  # 1-6 (x方向)
+    num_rows = 4  # A-D (y方向)
+    tip_diameter = 8.0  # 枪头孔位直径
+    tip_spacing_x = 18.0  # 列间距 (增加到18mm，更宽松)
+    tip_spacing_y = 18.0  # 行间距 (增加到18mm，更宽松)
+
+    # 计算起始位置 (居中对齐)
+    total_width = (num_cols - 1) * tip_spacing_x + tip_diameter
+    total_height = (num_rows - 1) * tip_spacing_y + tip_diameter
+    start_x = (size_x - total_width) / 2
+    start_y = (size_y - total_height) / 2
+
+    # 使用 create_ordered_items_2d 创建孔位
+    # create_ordered_items_2d 返回的 key 是数字索引: 0, 1, 2, ...
+    # 顺序是列优先: 先y后x (即 0=A1, 1=B1, 2=C1, 3=D1, 4=A2, 5=B2, ...)
+    sites = create_ordered_items_2d(
+        klass=ResourceHolder,
+        num_items_x=num_cols,
+        num_items_y=num_rows,
+        dx=start_x,
+        dy=start_y,
+        dz=5.0,
+        item_dx=tip_spacing_x,
+        item_dy=tip_spacing_y,
+        size_x=tip_diameter,
+        size_y=tip_diameter,
+        size_z=50.0,  # 枪头深度
+    )
+
+    # 更新 sites 中每个 ResourceHolder 的名称
+    for k, v in sites.items():
+        v.name = f"{name}_{v.name}"
+
+    # 创建枪头盒载架
+    # 注意：不设置 category，使用默认的 "bottle_carrier"，这样前端会显示为完整的矩形载架
+    tip_box = BottleCarrier(
+        name=name,
+        size_x=size_x,
+        size_y=size_y,
+        size_z=size_z,
+        sites=sites,  # 直接使用数字索引的 sites
+        model="BIOYOND_PolymerStation_TipBox",
+    )
+
+    # 设置自定义属性
+    tip_box.barcode = barcode
+    tip_box.tip_count = 24  # 4行×6列
+    tip_box.num_items_x = num_cols
+    tip_box.num_items_y = num_rows
+    tip_box.num_items_z = 1
+
+    # ⭐ 枪头盒不需要放入子资源
+    # 与其他 carrier 不同，枪头盒在 Bioyond 中是一个整体
+    # 不需要追踪每个枪头的状态，保持为空的 ResourceHolder 即可
+    # 这样前端会显示24个空槽位，可以用于放置枪头
+
+    return tip_box

unilabos/resources/bioyond/bottles.py

@@ -116,7 +116,9 @@ def BIOYOND_PolymerStation_TipBox(
     size_z: float = 100.0,   # 枪头盒高度
     barcode: str = None,
 ):
-    """创建4×6枪头盒 (24个枪头)
+    """创建4×6枪头盒 (24个枪头) - 使用 BottleCarrier 结构
+
+    注意：此函数已弃用，请使用 bottle_carriers.py 中的版本
 
     Args:
         name: 枪头盒名称
@@ -126,55 +128,11 @@ def BIOYOND_PolymerStation_TipBox(
         barcode: 条形码
 
     Returns:
-        TipBoxCarrier: 包含24个枪头孔位的枪头盒
+        BottleCarrier: 包含24个枪头孔位的枪头盒载架
     """
-    from pylabrobot.resources import Container, Coordinate
-
-    # 创建枪头盒容器
-    tip_box = Container(
-        name=name,
-        size_x=size_x,
-        size_y=size_y,
-        size_z=size_z,
-        category="tip_rack",
-        model="BIOYOND_PolymerStation_TipBox_4x6",
-    )
-
-    # 设置自定义属性
-    tip_box.barcode = barcode
-    tip_box.tip_count = 24  # 4行×6列
-    tip_box.num_items_x = 6  # 6列
-    tip_box.num_items_y = 4  # 4行
-
-    # 创建24个枪头孔位 (4行×6列)
-    # 假设孔位间距为 9mm
-    tip_spacing_x = 9.0  # 列间距
-    tip_spacing_y = 9.0  # 行间距
-    start_x = 14.38  # 第一个孔位的x偏移
-    start_y = 11.24  # 第一个孔位的y偏移
-
-    for row in range(4):  # A, B, C, D
-        for col in range(6):  # 1-6
-            spot_name = f"{chr(65 + row)}{col + 1}"  # A1, A2, ..., D6
-            x = start_x + col * tip_spacing_x
-            y = start_y + row * tip_spacing_y
-
-            # 创建枪头孔位容器
-            tip_spot = Container(
-                name=spot_name,
-                size_x=8.0,  # 单个枪头孔位大小
-                size_y=8.0,
-                size_z=size_z - 10.0,  # 略低于盒子高度
-                category="tip_spot",
-            )
-
-            # 添加到枪头盒
-            tip_box.assign_child_resource(
-                tip_spot,
-                location=Coordinate(x=x, y=y, z=0)
-            )
-
-    return tip_box
+    # 重定向到 bottle_carriers.py 中的实现
+    from unilabos.resources.bioyond.bottle_carriers import BIOYOND_PolymerStation_TipBox as TipBox_Carrier
+    return TipBox_Carrier(name=name, size_x=size_x, size_y=size_y, size_z=size_z, barcode=barcode)
 
 
 def BIOYOND_PolymerStation_Flask(

unilabos/resources/container.py

@@ -1,10 +1,6 @@
-import json
 from typing import Dict, Any
 
 from pylabrobot.resources import Container
-from unilabos_msgs.msg import Resource
-
-from unilabos.ros.msgs.message_converter import convert_from_ros_msg
 
 
 class RegularContainer(Container):
@@ -16,12 +12,12 @@ class RegularContainer(Container):
             kwargs["size_y"] = 0
         if "size_z" not in kwargs:
             kwargs["size_z"] = 0
+
         self.kwargs = kwargs
-        self.state = {}
         super().__init__(*args, category="container", **kwargs)
 
     def load_state(self, state: Dict[str, Any]):
-        self.state = state
+        super().load_state(state)
 
 
 def get_regular_container(name="container"):
@@ -29,7 +25,6 @@ def get_regular_container(name="container"):
     r.category = "container"
     return r
 
-#
 # class RegularContainer(object):
 #     # 第一个参数必须是id传入
 #     # noinspection PyShadowingBuiltins
@@ -89,4 +84,4 @@ def get_regular_container(name="container"):
 #         return to_dict
 #
 #     def __str__(self):
-#         return f"{self.id}"
+#         return f"{self.id}"

unilabos/resources/graphio.py

@@ -76,7 +76,7 @@ def canonicalize_nodes_data(
             if sample_id:
                 logger.error(f"{node}的sample_id参数已弃用，sample_id: {sample_id}")
         for k in list(node.keys()):
-            if k not in ["id", "uuid", "name", "description", "schema", "model", "icon", "parent_uuid", "parent", "type", "class", "position", "config", "data", "children", "pose"]:
+            if k not in ["id", "uuid", "name", "description", "schema", "model", "icon", "parent_uuid", "parent", "type", "class", "position", "config", "data", "children", "pose", "extra"]:
                 v = node.pop(k)
                 node["config"][k] = v
     if outer_host_node_id is not None:
@@ -779,9 +779,12 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
                     bottle = plr_material[number] = initialize_resource(
                         {"name": f'{detail["name"]}_{number}', "class": reverse_type_mapping[typeName][0]}, resource_type=ResourcePLR
                     )
-                    bottle.tracker.liquids = [
-                        (detail["name"], float(detail.get("quantity", 0)) if detail.get("quantity") else 0)
-                    ]
+                    # 只有具有 tracker 属性的容器才设置液体信息（如 Bottle, Well）
+                    # ResourceHolder 等不支持液体追踪的容器跳过
+                    if hasattr(bottle, "tracker"):
+                        bottle.tracker.liquids = [
+                            (detail["name"], float(detail.get("quantity", 0)) if detail.get("quantity") else 0)
+                        ]
                     bottle.code = detail.get("code", "")
                     logger.debug(f"  └─ [子物料] {detail['name']} → {plr_material.name}[{number}] (类型:{typeName})")
                 else:
@@ -790,9 +793,11 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
             # 只对有 capacity 属性的容器（液体容器）处理液体追踪
             if hasattr(plr_material, 'capacity'):
                 bottle = plr_material[0] if plr_material.capacity > 0 else plr_material
-                bottle.tracker.liquids = [
-                    (material["name"], float(material.get("quantity", 0)) if material.get("quantity") else 0)
-                ]
+                # 确保 bottle 有 tracker 属性才设置液体信息
+                if hasattr(bottle, "tracker"):
+                    bottle.tracker.liquids = [
+                        (material["name"], float(material.get("quantity", 0)) if material.get("quantity") else 0)
+                    ]
 
         plr_materials.append(plr_material)
 
@@ -821,24 +826,29 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
                 wh_name = loc.get("whName")
                 logger.debug(f"[物料位置] {unique_name} 尝试放置到 warehouse: {wh_name} (Bioyond坐标: x={loc.get('x')}, y={loc.get('y')}, z={loc.get('z')})")
 
+                # Bioyond坐标映射 (重要！): x→行(1=A,2=B...), y→列(1=01,2=02...), z→层(通常=1)
+                # 必须在warehouse映射之前先获取坐标，以便后续调整
+                x = loc.get("x", 1)  # 行号 (1-based: 1=A, 2=B, 3=C, 4=D)
+                y = loc.get("y", 1)  # 列号 (1-based: 1=01, 2=02, 3=03...)
+                z = loc.get("z", 1)  # 层号 (1-based, 通常为1)
+
                 # 特殊处理: Bioyond的"堆栈1"需要映射到"堆栈1左"或"堆栈1右"
-                # 根据列号(x)判断: 1-4映射到左侧, 5-8映射到右侧
+                # 根据列号(y)判断: 1-4映射到左侧, 5-8映射到右侧
                 if wh_name == "堆栈1":
-                    x_val = loc.get("x", 1)
-                    if 1 <= x_val <= 4:
+                    if 1 <= y <= 4:
                         wh_name = "堆栈1左"
-                    elif 5 <= x_val <= 8:
+                    elif 5 <= y <= 8:
                         wh_name = "堆栈1右"
+                        y = y - 4  # 调整列号: 5-8映射到1-4
                     else:
-                        logger.warning(f"物料 {material['name']} 的列号 x={x_val} 超出范围，无法映射到堆栈1左或堆栈1右")
+                        logger.warning(f"物料 {material['name']} 的列号 y={y} 超出范围，无法映射到堆栈1左或堆栈1右")
                         continue
 
                 # 特殊处理: Bioyond的"站内Tip盒堆栈"也需要进行拆分映射
                 if wh_name == "站内Tip盒堆栈":
-                    y_val = loc.get("y", 1)
-                    if y_val == 1:
+                    if y == 1:
                         wh_name = "站内Tip盒堆栈(右)"
-                    elif y_val in [2, 3]:
+                    elif y in [2, 3]:
                         wh_name = "站内Tip盒堆栈(左)"
                         y = y - 1  # 调整列号，因为左侧仓库对应的 Bioyond y=2 实际上是它的第1列
 
@@ -846,15 +856,6 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[st
                     warehouse = deck.warehouses[wh_name]
                     logger.debug(f"[Warehouse匹配] 找到warehouse: {wh_name} (容量: {warehouse.capacity}, 行×列: {warehouse.num_items_x}×{warehouse.num_items_y})")
 
-                    # Bioyond坐标映射 (重要！): x→行(1=A,2=B...), y→列(1=01,2=02...), z→层(通常=1)
-                    x = loc.get("x", 1)  # 行号 (1-based: 1=A, 2=B, 3=C, 4=D)
-                    y = loc.get("y", 1)  # 列号 (1-based: 1=01, 2=02, 3=03...)
-                    z = loc.get("z", 1)  # 层号 (1-based, 通常为1)
-
-                    # 如果是右侧堆栈，需要调整列号 (5→1, 6→2, 7→3, 8→4)
-                    if wh_name == "堆栈1右":
-                        y = y - 4  # 将5-8映射到1-4
-
                     # 特殊处理竖向warehouse（站内试剂存放堆栈、测量小瓶仓库）
                     # 这些warehouse使用 vertical-col-major 布局
                     if wh_name in ["站内试剂存放堆栈", "测量小瓶仓库(测密度)"]:

unilabos/resources/plr_additional_res_reg.py

@@ -18,3 +18,9 @@ def register():
     from unilabos.devices.liquid_handling.rviz_backend import UniLiquidHandlerRvizBackend
     from unilabos.devices.liquid_handling.laiyu.backend.laiyu_v_backend import UniLiquidHandlerLaiyuBackend
 
+    # noinspection PyUnresolvedReferences
+    from unilabos.resources.bioyond.decks import (
+        BIOYOND_PolymerReactionStation_Deck,
+        BIOYOND_PolymerPreparationStation_Deck,
+        BIOYOND_YB_Deck,
+    )

unilabos/resources/resource_tracker.py

@@ -16,6 +16,7 @@ if TYPE_CHECKING:
 
 
 EXTRA_CLASS = "unilabos_resource_class"
+FRONTEND_POSE_EXTRA = "unilabos_frontend_pose_extra"
 EXTRA_SAMPLE_UUID = "sample_uuid"
 EXTRA_UNILABOS_SAMPLE_UUID = "unilabos_sample_uuid"
 
@@ -38,24 +39,52 @@ class LabSample(TypedDict):
     extra: Dict[str, Any]
 
 
+class ResourceDictPositionSizeType(TypedDict):
+    depth: float
+    width: float
+    height: float
+
+
 class ResourceDictPositionSize(BaseModel):
     depth: float = Field(description="Depth", default=0.0)  # z
     width: float = Field(description="Width", default=0.0)  # x
     height: float = Field(description="Height", default=0.0)  # y
 
 
+class ResourceDictPositionScaleType(TypedDict):
+    x: float
+    y: float
+    z: float
+
+
 class ResourceDictPositionScale(BaseModel):
     x: float = Field(description="x scale", default=0.0)
     y: float = Field(description="y scale", default=0.0)
     z: float = Field(description="z scale", default=0.0)
 
 
+class ResourceDictPositionObjectType(TypedDict):
+    x: float
+    y: float
+    z: float
+
+
 class ResourceDictPositionObject(BaseModel):
     x: float = Field(description="X coordinate", default=0.0)
     y: float = Field(description="Y coordinate", default=0.0)
     z: float = Field(description="Z coordinate", default=0.0)
 
 
+class ResourceDictPositionType(TypedDict):
+    size: ResourceDictPositionSizeType
+    scale: ResourceDictPositionScaleType
+    layout: Literal["2d", "x-y", "z-y", "x-z"]
+    position: ResourceDictPositionObjectType
+    position3d: ResourceDictPositionObjectType
+    rotation: ResourceDictPositionObjectType
+    cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"]
+
+
 class ResourceDictPosition(BaseModel):
     size: ResourceDictPositionSize = Field(description="Resource size", default_factory=ResourceDictPositionSize)
     scale: ResourceDictPositionScale = Field(description="Resource scale", default_factory=ResourceDictPositionScale)
@@ -72,6 +101,25 @@ class ResourceDictPosition(BaseModel):
     cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"] = Field(
         description="Cross section type", default="rectangle"
     )
+    extra: Optional[Dict[str, Any]] = Field(description="Extra data", default=None)
+
+
+class ResourceDictType(TypedDict):
+    id: str
+    uuid: str
+    name: str
+    description: str
+    resource_schema: Dict[str, Any]
+    model: Dict[str, Any]
+    icon: str
+    parent_uuid: Optional[str]
+    parent: Optional["ResourceDictType"]
+    type: Union[Literal["device"], str]
+    klass: str
+    pose: ResourceDictPositionType
+    config: Dict[str, Any]
+    data: Dict[str, Any]
+    extra: Dict[str, Any]
 
 
 # 统一的资源字典模型，parent 自动序列化为 parent_uuid，children 不序列化
@@ -363,8 +411,18 @@ class ResourceTreeSet(object):
                 "deck": "deck",
                 "tip_rack": "tip_rack",
                 "tip_spot": "tip_spot",
+                "tip": "tip",  # 添加 tip 类型支持
                 "tube": "tube",
                 "bottle_carrier": "bottle_carrier",
+                "material_hole": "material_hole",
+                "container": "container",
+                "material_plate": "material_plate",
+                "electrode_sheet": "electrode_sheet",
+                "warehouse": "warehouse",
+                "magazine_holder": "magazine_holder",
+                "resource_group": "resource_group",
+                "trash": "trash",
+                "plate_adapter": "plate_adapter",
             }
             if source in replace_info:
                 return replace_info[source]
@@ -408,6 +466,7 @@ class ResourceTreeSet(object):
                 "position3d": raw_pos,
                 "rotation": d["rotation"],
                 "cross_section_type": d.get("cross_section_type", "rectangle"),
+                "extra": extra.get(FRONTEND_POSE_EXTRA)
             }
 
             # 先构建当前节点的字典（不包含children）
@@ -493,6 +552,7 @@ class ResourceTreeSet(object):
             name_to_uuid[node.res_content.name] = node.res_content.uuid
             all_states[node.res_content.name] = node.res_content.data
             name_to_extra[node.res_content.name] = node.res_content.extra
+            name_to_extra[node.res_content.name][FRONTEND_POSE_EXTRA] = node.res_content.pose.extra
             name_to_extra[node.res_content.name][EXTRA_CLASS] = node.res_content.klass
             for child in node.children:
                 collect_node_data(child, name_to_uuid, all_states, name_to_extra)
@@ -561,7 +621,7 @@ class ResourceTreeSet(object):
                 plr_resources.append(plr_resource)
 
             except Exception as e:
-                logger.error(f"转换 PLR 资源失败: {e}")
+                logger.error(f"转换 PLR 资源失败: {e} {str(plr_dict)[:1000]}")
                 import traceback
 
                 logger.error(f"堆栈: {traceback.format_exc()}")
@@ -781,14 +841,27 @@ class ResourceTreeSet(object):
                                 f"从远端同步了 {added_count} 个物料子树"
                             )
                     else:
-                        # 情况2: 二级是物料（不是 device）
-                        if remote_child_name not in local_children_map:
-                            # 引入整个子树
-                            remote_child.res_content.parent = local_device.res_content
-                            local_device.children.append(remote_child)
-                            logger.info(f"Device '{remote_root_id}': 从远端同步物料子树 '{remote_child_name}'")
-                        else:
-                            logger.info(f"物料 '{remote_root_id}/{remote_child_name}' 已存在，跳过")
+                        # 二级物料已存在，比较三级子节点是否缺失
+                        local_material = local_children_map[remote_child_name]
+                        local_material_children_map = {child.res_content.name: child for child in
+                                                       local_material.children}
+                        added_count = 0
+                        for remote_sub in remote_child.children:
+                            remote_sub_name = remote_sub.res_content.name
+                            if remote_sub_name not in local_material_children_map:
+                                remote_sub.res_content.parent = local_material.res_content
+                                local_material.children.append(remote_sub)
+                                added_count += 1
+                            else:
+                                logger.info(
+                                    f"物料 '{remote_root_id}/{remote_child_name}/{remote_sub_name}' "
+                                    f"已存在，跳过"
+                                )
+                        if added_count > 0:
+                            logger.info(
+                                f"物料 '{remote_root_id}/{remote_child_name}': "
+                                f"从远端同步了 {added_count} 个子物料"
+                            )
             else:
                 # 情况1: 一级节点是物料（不是 device）
                 # 检查是否已存在

unilabos/ros/nodes/base_device_node.py

@@ -460,7 +460,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
             }
             res.response = json.dumps(final_response)
             # 如果driver自己就有assign的方法，那就使用driver自己的assign方法
-            if hasattr(self.driver_instance, "create_resource"):
+            if hasattr(self.driver_instance, "create_resource") and self.node_name != "host_node":
                 create_resource_func = getattr(self.driver_instance, "create_resource")
                 try:
                     ret = create_resource_func(
@@ -915,8 +915,24 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                         else []
                     )
                     if target_site is not None and sites is not None and site_names is not None:
-                        site_index = sites.index(original_instance)
-                        site_name = site_names[site_index]
+                        site_index = None
+                        try:
+                            # sites 可能是 Resource 列表或 dict 列表 (如 PRCXI9300Deck)
+                            # 只有itemized_carrier在使用，准备弃用
+                            site_index = sites.index(original_instance)
+                        except ValueError:
+                            # dict 类型的 sites: 通过name匹配
+                            for idx, site in enumerate(sites):
+                                if original_instance.name == site["occupied_by"]:
+                                    site_index = idx
+                                    break
+                                elif (original_instance.location.x == site["position"]["x"] and original_instance.location.y == site["position"]["y"] and original_instance.location.z == site["position"]["z"]):
+                                    site_index = idx
+                                    break
+                        if site_index is None:
+                            site_name = None
+                        else:
+                            site_name = site_names[site_index]
                         if site_name != target_site:
                             parent = self.transfer_to_new_resource(original_instance, tree, additional_add_params)
                             if parent is not None:
@@ -924,6 +940,14 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                 parent_appended = True
 
                 # 加载状态
+                # noinspection PyProtectedMember
+                original_instance._size_x = plr_resource._size_x
+                # noinspection PyProtectedMember
+                original_instance._size_y = plr_resource._size_y
+                # noinspection PyProtectedMember
+                original_instance._size_z = plr_resource._size_z
+                # noinspection PyProtectedMember
+                original_instance._local_size_z = plr_resource._local_size_z
                 original_instance.location = plr_resource.location
                 original_instance.rotation = plr_resource.rotation
                 original_instance.barcode = plr_resource.barcode
@@ -984,7 +1008,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                         ].call_async(
                             r
                         )  # type: ignore
-                        self.lab_logger().info(f"确认资源云端 Add 结果: {response.response}")
+                        self.lab_logger().trace(f"确认资源云端 Add 结果: {response.response}")
                         results.append(result)
                     elif action == "update":
                         if tree_set is None:
@@ -1010,7 +1034,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                             ].call_async(
                                 r
                             )  # type: ignore
-                            self.lab_logger().info(f"确认资源云端 Update 结果: {response.response}")
+                            self.lab_logger().trace(f"确认资源云端 Update 结果: {response.response}")
                         results.append(result)
                     elif action == "remove":
                         result = _handle_remove(resources_uuid)

unilabos/ros/nodes/presets/host_node.py

@@ -35,7 +35,7 @@ from unilabos.resources.resource_tracker import (
     ResourceTreeInstance,
     RETURN_UNILABOS_SAMPLES,
     JSON_UNILABOS_PARAM,
-    PARAM_SAMPLE_UUIDS,
+    PARAM_SAMPLE_UUIDS, SampleUUIDsType, LabSample,
 )
 from unilabos.ros.initialize_device import initialize_device_from_dict
 from unilabos.ros.msgs.message_converter import (
@@ -64,7 +64,8 @@ class DeviceActionStatus:
 
 class TestResourceReturn(TypedDict):
     resources: List[List[ResourceDict]]
-    devices: List[DeviceSlot]
+    devices: List[Dict[str, Any]]
+    unilabos_samples: List[LabSample]
 
 
 class TestLatencyReturn(TypedDict):
@@ -1194,7 +1195,7 @@ class HostNode(BaseROS2DeviceNode):
                 self.lab_logger().info(f"[Host Node-Resource] UUID映射: {len(uuid_mapping)} 个节点")
             # 还需要加入到资源图中，暂不实现，考虑资源图新的获取方式
             response.response = json.dumps(uuid_mapping)
-            self.lab_logger().info(f"[Host Node-Resource] Resource tree add completed, success: {success}")
+            self.lab_logger().info(f"[Host Node-Resource] Resource tree update completed, success: {success}")
 
     async def _resource_tree_update_callback(self, request: SerialCommand_Request, response: SerialCommand_Response):
         """
@@ -1582,6 +1583,7 @@ class HostNode(BaseROS2DeviceNode):
 
     def test_resource(
         self,
+        sample_uuids: SampleUUIDsType,
         resource: ResourceSlot = None,
         resources: List[ResourceSlot] = None,
         device: DeviceSlot = None,
@@ -1596,6 +1598,7 @@ class HostNode(BaseROS2DeviceNode):
         return {
             "resources": ResourceTreeSet.from_plr_resources([resource, *resources], known_newly_created=True).dump(),
             "devices": [device, *devices],
+            "unilabos_samples": [LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for sample_uuid, content in sample_uuids.items()]
         }
 
     def handle_pong_response(self, pong_data: dict):

unilabos/test/experiments/xkc_sensor_test.json

@@ -0,0 +1,29 @@
+{
+    "nodes": [
+        {
+            "id": "Liquid_Sensor_1",
+            "name": "XKC Sensor",
+            "children": [],
+            "parent": null,
+            "type": "device",
+            "class": "sensor.xkc_rs485",
+            "position": {
+                "x": 0,
+                "y": 0,
+                "z": 0
+            },
+            "config": {
+                "port": "/dev/tty.usbserial-3110",
+                "baudrate": 9600,
+                "device_id": 1,
+                "threshold": 300,
+                "timeout": 3.0
+            },
+            "data": {
+                "level": false,
+                "rssi": 0
+            }
+        }
+    ],
+    "links": []
+}

unilabos/test/experiments/zdt_motor_test.json

@@ -0,0 +1,28 @@
+{
+    "nodes": [
+        {
+            "id": "ZDT_Motor",
+            "name": "ZDT Motor",
+            "children": [],
+            "parent": null,
+            "type": "device",
+            "class": "motor.zdt_x42",
+            "position": {
+                "x": 0,
+                "y": 0,
+                "z": 0
+            },
+            "config": {
+                "port": "/dev/tty.usbserial-3110",
+                "baudrate": 115200,
+                "device_id": 1,
+                "debug": true
+            },
+            "data": {
+                "position": 0,
+                "status": "idle"
+            }
+        }
+    ],
+    "links": []
+}

unilabos/workflow/common.py

@@ -26,7 +26,7 @@
     res_id: plate_slot_{slot}
     device_id: /PRCXI
     class_name: PRCXI_BioER_96_wellplate
-    parent: /PRCXI/PRCXI_Deck/T{slot}
+    parent: /PRCXI/PRCXI_Deck
     slot_on_deck: "{slot}"
 - 输出端口: labware（用于连接 set_liquid_from_plate）
 - 控制流: create_resource 之间通过 ready 端口串联
@@ -122,7 +122,7 @@ NODE_TYPE_DEFAULT = "ILab"  # 所有节点的默认类型
 # create_resource 节点默认参数
 CREATE_RESOURCE_DEFAULTS = {
     "device_id": "/PRCXI",
-    "parent_template": "/PRCXI/PRCXI_Deck/T{slot}",  # {slot} 会被替换为实际的 slot 值
+    "parent_template": "/PRCXI/PRCXI_Deck",
     "class_name": "PRCXI_BioER_96_wellplate",
 }
 
@@ -362,14 +362,16 @@ def build_protocol_graph(
     protocol_steps: List[Dict[str, Any]],
     workstation_name: str,
     action_resource_mapping: Optional[Dict[str, str]] = None,
+    labware_defs: Optional[List[Dict[str, Any]]] = None,
 ) -> WorkflowGraph:
     """统一的协议图构建函数，根据设备类型自动选择构建逻辑
 
     Args:
-        labware_info: labware 信息字典，格式为 {name: {slot, well, labware, ...}, ...}
+        labware_info: reagent 信息字典，格式为 {name: {slot, well}, ...}，用于 set_liquid 和 well 查找
         protocol_steps: 协议步骤列表
         workstation_name: 工作站名称
         action_resource_mapping: action 到 resource_name 的映射字典，可选
+        labware_defs: labware 定义列表，格式为 [{"name": "...", "slot": "1", "type": "lab_xxx"}, ...]
     """
     G = WorkflowGraph()
     resource_last_writer = {}  # reagent_name -> "node_id:port"
@@ -377,18 +379,7 @@ def build_protocol_graph(
 
     protocol_steps = refactor_data(protocol_steps, action_resource_mapping)
 
-    # ==================== 第一步：按 slot 去重创建 create_resource 节点 ====================
-    # 收集所有唯一的 slot
-    slots_info = {}  # slot -> {labware, res_id}
-    for labware_id, item in labware_info.items():
-        slot = str(item.get("slot", ""))
-        if slot and slot not in slots_info:
-            res_id = f"plate_slot_{slot}"
-            slots_info[slot] = {
-                "labware": item.get("labware", ""),
-                "res_id": res_id,
-            }
-
+    # ==================== 第一步：按 slot 创建 create_resource 节点 ====================
     # 创建 Group 节点，包含所有 create_resource 节点
     group_node_id = str(uuid.uuid4())
     G.add_node(
@@ -404,38 +395,42 @@ def build_protocol_graph(
         param=None,
     )
 
-    # 为每个唯一的 slot 创建 create_resource 节点
+    # 直接使用 JSON 中的 labware 定义，每个 slot 一条记录，type 即 class_name
     res_index = 0
-    for slot, info in slots_info.items():
-        node_id = str(uuid.uuid4())
-        res_id = info["res_id"]
+    for lw in (labware_defs or []):
+        slot = str(lw.get("slot", ""))
+        if not slot or slot in slot_to_create_resource:
+            continue  # 跳过空 slot 或已处理的 slot
+
+        lw_name = lw.get("name", f"slot {slot}")
+        lw_type = lw.get("type", CREATE_RESOURCE_DEFAULTS["class_name"])
+        res_id = f"plate_slot_{slot}"
 
         res_index += 1
+        node_id = str(uuid.uuid4())
         G.add_node(
             node_id,
             template_name="create_resource",
             resource_name="host_node",
-            name=f"Plate {res_index}",
-            description=f"Create plate on slot {slot}",
+            name=lw_name,
+            description=f"Create {lw_name}",
             lab_node_type="Labware",
             footer="create_resource-host_node",
             device_name=DEVICE_NAME_HOST,
             type=NODE_TYPE_DEFAULT,
-            parent_uuid=group_node_id,  # 指向 Group 节点
-            minimized=True,  # 折叠显示
+            parent_uuid=group_node_id,
+            minimized=True,
             param={
                 "res_id": res_id,
                 "device_id": CREATE_RESOURCE_DEFAULTS["device_id"],
-                "class_name": CREATE_RESOURCE_DEFAULTS["class_name"],
-                "parent": CREATE_RESOURCE_DEFAULTS["parent_template"].format(slot=slot),
+                "class_name": lw_type,
+                "parent": CREATE_RESOURCE_DEFAULTS["parent_template"],
                 "bind_locations": {"x": 0.0, "y": 0.0, "z": 0.0},
                 "slot_on_deck": slot,
             },
         )
         slot_to_create_resource[slot] = node_id
 
-        # create_resource 之间不需要 ready 连接
-
     # ==================== 第二步：为每个 reagent 创建 set_liquid_from_plate 节点 ====================
     # 创建 Group 节点，包含所有 set_liquid_from_plate 节点
     set_liquid_group_id = str(uuid.uuid4())

unilabos/workflow/convert_from_json.py

@@ -1,16 +1,20 @@
 """
 JSON 工作流转换模块
 
-将 workflow/reagent 格式的 JSON 转换为统一工作流格式。
+将 workflow/reagent/labware 格式的 JSON 转换为统一工作流格式。
 
 输入格式:
 {
+    "labware": [
+        {"name": "...", "slot": "1", "type": "lab_xxx"},
+        ...
+    ],
     "workflow": [
         {"action": "...", "action_args": {...}},
         ...
     ],
     "reagent": {
-        "reagent_name": {"slot": int, "well": [...], "labware": "..."},
+        "reagent_name": {"slot": int, "well": [...]},
         ...
     }
 }
@@ -245,18 +249,18 @@ def convert_from_json(
     if "workflow" not in json_data or "reagent" not in json_data:
         raise ValueError(
             "不支持的 JSON 格式。请使用标准格式:\n"
-            '{"workflow": [{"action": "...", "action_args": {...}}, ...], '
-            '"reagent": {"name": {"slot": int, "well": [...], "labware": "..."}, ...}}'
+            '{"labware": [...], "workflow": [...], "reagent": {...}}'
         )
 
     # 提取数据
     workflow = json_data["workflow"]
     reagent = json_data["reagent"]
+    labware_defs = json_data.get("labware", [])  # 新的 labware 定义列表
 
     # 规范化步骤数据
     protocol_steps = normalize_workflow_steps(workflow)
 
-    # reagent 已经是字典格式，直接使用
+    # reagent 已经是字典格式，用于 set_liquid 和 well 数量查找
     labware_info = reagent
 
     # 构建工作流图
@@ -265,6 +269,7 @@ def convert_from_json(
         protocol_steps=protocol_steps,
         workstation_name=workstation_name,
         action_resource_mapping=ACTION_RESOURCE_MAPPING,
+        labware_defs=labware_defs,
     )
 
     # 校验句柄配置

unilabos_msgs/package.xml

@@ -2,7 +2,7 @@
 <?xml-model href="http://download.ros.org/schema/package_format3.xsd" schematypens="http://www.w3.org/2001/XMLSchema"?>
 <package format="3">
   <name>unilabos_msgs</name>
-  <version>0.10.17</version>
+  <version>0.10.18</version>
   <description>ROS2 Messages package for unilabos devices</description>
   <maintainer email="changjh@pku.edu.cn">Junhan Chang</maintainer>
   <maintainer email="18435084+Xuwznln@users.noreply.github.com">Xuwznln</maintainer>