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12 Commits

Author SHA1 Message Date
Xuwznln
5c047beb83 support container as example
add z index

(cherry picked from commit 145fcaae65)
2026-03-03 18:04:13 +08:00
Xuwznln
b40c087143 fix container volume 2026-03-03 17:13:32 +08:00
Xuwznln
7f1cc3b2a5 update materials 2026-03-03 11:43:52 +08:00
Xuwznln
3f160c2049 更新prcxi deck & 新增 unilabos_resource_slot 2026-03-03 11:40:23 +08:00
Xuwznln
a54e7c0f23 new workflow & prcxi slot removal 2026-03-02 18:29:25 +08:00
Xuwznln
e5015cd5e0 fix size change 2026-03-02 15:52:44 +08:00
Xuwznln
514373c164 v0.10.18
(cherry picked from commit 06b6f0d804)
2026-03-02 02:30:10 +08:00
Xuwznln
fcea02585a no opcua installation on macos 2026-02-28 09:41:37 +08:00
Xuwznln
07cf690897 fix possible crash 2026-02-12 01:46:26 +08:00
Xuwznln
cfea27460a fix deck & host_node 2026-02-12 01:46:24 +08:00
Xuwznln
b7d3e980a9 set liquid with tube 2026-02-12 01:46:23 +08:00
Xuwznln
f9ed6cb3fb add test_resource_schema 2026-02-11 14:02:21 +08:00
20 changed files with 698 additions and 861 deletions

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@@ -3,7 +3,7 @@
package: package:
name: unilabos name: unilabos
version: 0.10.17 version: 0.10.18
source: source:
path: ../../unilabos path: ../../unilabos
@@ -46,13 +46,15 @@ requirements:
- jinja2 - jinja2
- requests - requests
- uvicorn - uvicorn
- opcua # [not osx] - if: not osx
then:
- opcua
- pyserial - pyserial
- pandas - pandas
- pymodbus - pymodbus
- matplotlib - matplotlib
- pylibftdi - pylibftdi
- uni-lab::unilabos-env ==0.10.17 - uni-lab::unilabos-env ==0.10.18
about: about:
repository: https://github.com/deepmodeling/Uni-Lab-OS repository: https://github.com/deepmodeling/Uni-Lab-OS

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@@ -2,7 +2,7 @@
package: package:
name: unilabos-env name: unilabos-env
version: 0.10.17 version: 0.10.18
build: build:
noarch: generic noarch: generic

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@@ -3,7 +3,7 @@
package: package:
name: unilabos-full name: unilabos-full
version: 0.10.17 version: 0.10.18
build: build:
noarch: generic noarch: generic
@@ -11,7 +11,7 @@ build:
requirements: requirements:
run: run:
# Base unilabos package (includes unilabos-env) # Base unilabos package (includes unilabos-env)
- uni-lab::unilabos ==0.10.17 - uni-lab::unilabos ==0.10.18
# Documentation tools # Documentation tools
- sphinx - sphinx
- sphinx_rtd_theme - sphinx_rtd_theme

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@@ -1,6 +1,6 @@
package: package:
name: ros-humble-unilabos-msgs name: ros-humble-unilabos-msgs
version: 0.10.17 version: 0.10.18
source: source:
path: ../../unilabos_msgs path: ../../unilabos_msgs
target_directory: src target_directory: src

View File

@@ -1,6 +1,6 @@
package: package:
name: unilabos name: unilabos
version: "0.10.17" version: "0.10.18"
source: source:
path: ../.. path: ../..

View File

@@ -4,7 +4,7 @@ package_name = 'unilabos'
setup( setup(
name=package_name, name=package_name,
version='0.10.17', version='0.10.18',
packages=find_packages(), packages=find_packages(),
include_package_data=True, include_package_data=True,
install_requires=['setuptools'], install_requires=['setuptools'],

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@@ -1 +1 @@
__version__ = "0.10.17" __version__ = "0.10.18"

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@@ -1,6 +1,7 @@
import argparse import argparse
import asyncio import asyncio
import os import os
import platform
import shutil import shutil
import signal import signal
import sys import sys
@@ -358,7 +359,7 @@ def main():
if BasicConfig.test_mode: if BasicConfig.test_mode:
print_status("启用测试模式:所有动作将模拟执行,不调用真实硬件", "warning") print_status("启用测试模式:所有动作将模拟执行,不调用真实硬件", "warning")
BasicConfig.communication_protocol = "websocket" BasicConfig.communication_protocol = "websocket"
machine_name = os.popen("hostname").read().strip() machine_name = platform.node()
machine_name = "".join([c if c.isalnum() or c == "_" else "_" for c in machine_name]) machine_name = "".join([c if c.isalnum() or c == "_" else "_" for c in machine_name])
BasicConfig.machine_name = machine_name BasicConfig.machine_name = machine_name
BasicConfig.vis_2d_enable = args_dict["2d_vis"] BasicConfig.vis_2d_enable = args_dict["2d_vis"]

View File

@@ -1184,6 +1184,11 @@ class QueueProcessor:
logger.debug(f"[QueueProcessor] Sending busy status for {len(queued_jobs)} queued jobs") logger.debug(f"[QueueProcessor] Sending busy status for {len(queued_jobs)} queued jobs")
for job_info in queued_jobs: for job_info in queued_jobs:
# 快照可能已过期:在遍历过程中 end_job() 可能已将此 job 移至 READY
# 此时不应再发送 busy/need_more否则会覆盖已发出的 free=True 通知
if job_info.status != JobStatus.QUEUE:
continue
message = { message = {
"action": "report_action_state", "action": "report_action_state",
"data": { "data": {

View File

@@ -21,7 +21,7 @@ from pylabrobot.resources import (
ResourceHolder, ResourceHolder,
Lid, Lid,
Trash, Trash,
Tip, Tip, TubeRack,
) )
from typing_extensions import TypedDict from typing_extensions import TypedDict
@@ -696,10 +696,13 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
如果 liquid_names 和 volumes 为空,但 plate 和 well_names 不为空,直接返回 plate 和 wells。 如果 liquid_names 和 volumes 为空,但 plate 和 well_names 不为空,直接返回 plate 和 wells。
""" """
assert issubclass(plate.__class__, Plate), "plate must be a Plate" assert issubclass(plate.__class__, Plate) or issubclass(plate.__class__, TubeRack) , f"plate must be a Plate, now: {type(plate)}"
plate: Plate = cast(Plate, cast(Resource, plate)) plate: Union[Plate, TubeRack]
# 根据 well_names 获取对应的 Well 对象 # 根据 well_names 获取对应的 Well 对象
wells = [plate.get_well(name) for name in well_names] if issubclass(plate.__class__, Plate):
wells = [plate.get_well(name) for name in well_names]
elif issubclass(plate.__class__, TubeRack):
wells = [plate.get_tube(name) for name in well_names]
res_volumes = [] res_volumes = []
# 如果 liquid_names 和 volumes 都为空,直接返回 # 如果 liquid_names 和 volumes 都为空,直接返回

View File

@@ -55,6 +55,7 @@ from unilabos.devices.liquid_handling.liquid_handler_abstract import (
TransferLiquidReturn, TransferLiquidReturn,
) )
from unilabos.registry.placeholder_type import ResourceSlot from unilabos.registry.placeholder_type import ResourceSlot
from unilabos.resources.resource_tracker import ResourceTreeSet
from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
@@ -90,20 +91,103 @@ class PRCXI9300Deck(Deck):
该类定义了 PRCXI 9300 的工作台布局和槽位信息。 该类定义了 PRCXI 9300 的工作台布局和槽位信息。
""" """
def __init__(self, name: str, size_x: float, size_y: float, size_z: float, **kwargs): # T1-T16 默认位置 (4列×4行)
super().__init__(name, size_x, size_y, size_z) _DEFAULT_SITE_POSITIONS = [
self.slots = [None] * 16 # PRCXI 9300/9320 最大有 16 个槽位 (0, 0, 0), (138, 0, 0), (276, 0, 0), (414, 0, 0), # T1-T4
self.slot_locations = [Coordinate(0, 0, 0)] * 16 (0, 96, 0), (138, 96, 0), (276, 96, 0), (414, 96, 0), # T5-T8
(0, 192, 0), (138, 192, 0), (276, 192, 0), (414, 192, 0), # T9-T12
(0, 288, 0), (138, 288, 0), (276, 288, 0), (414, 288, 0), # T13-T16
]
_DEFAULT_SITE_SIZE = {"width": 128.0, "height": 86, "depth": 0}
_DEFAULT_CONTENT_TYPE = ["plate", "tip_rack", "plates", "tip_racks", "tube_rack", "adaptor"]
def __init__(self, name: str, size_x: float, size_y: float, size_z: float,
sites: Optional[List[Dict[str, Any]]] = None, **kwargs):
super().__init__(size_x, size_y, size_z, name)
if sites is not None:
self.sites: List[Dict[str, Any]] = [dict(s) for s in sites]
else:
self.sites = []
for i, (x, y, z) in enumerate(self._DEFAULT_SITE_POSITIONS):
self.sites.append({
"label": f"T{i + 1}",
"visible": True,
"position": {"x": x, "y": y, "z": z},
"size": dict(self._DEFAULT_SITE_SIZE),
"content_type": list(self._DEFAULT_CONTENT_TYPE),
})
# _ordering: label -> None, 用于外部通过 list(keys()).index(site) 将 Tn 转换为 spot index
self._ordering = collections.OrderedDict(
(site["label"], None) for site in self.sites
)
def _get_site_location(self, idx: int) -> Coordinate:
pos = self.sites[idx]["position"]
return Coordinate(pos["x"], pos["y"], pos["z"])
def _get_site_resource(self, idx: int) -> Optional[Resource]:
site_loc = self._get_site_location(idx)
for child in self.children:
if child.location == site_loc:
return child
return None
def assign_child_resource(
self,
resource: Resource,
location: Optional[Coordinate] = None,
reassign: bool = True,
spot: Optional[int] = None,
):
idx = spot
if spot is not None:
idx = spot
else:
for i, site in enumerate(self.sites):
site_loc = self._get_site_location(i)
if site.get("label") == resource.name:
idx = i
break
if location is not None and site_loc == location:
idx = i
break
if idx is None:
for i in range(len(self.sites)):
if self._get_site_resource(i) is None:
idx = i
break
if idx is None:
raise ValueError(f"No available site on deck '{self.name}' for resource '{resource.name}'")
if not reassign and self._get_site_resource(idx) is not None:
raise ValueError(f"Site {idx} ('{self.sites[idx]['label']}') is already occupied")
loc = self._get_site_location(idx)
super().assign_child_resource(resource, location=loc, reassign=reassign)
def assign_child_at_slot(self, resource: Resource, slot: int, reassign: bool = False) -> None: def assign_child_at_slot(self, resource: Resource, slot: int, reassign: bool = False) -> None:
if self.slots[slot - 1] is not None and not reassign: self.assign_child_resource(resource, spot=slot - 1, reassign=reassign)
raise ValueError(f"Spot {slot} is already occupied")
self.slots[slot - 1] = resource def serialize(self) -> dict:
super().assign_child_resource(resource, location=self.slot_locations[slot - 1]) data = super().serialize()
sites_out = []
for i, site in enumerate(self.sites):
occupied = self._get_site_resource(i)
sites_out.append({
"label": site["label"],
"visible": site.get("visible", True),
"occupied_by": occupied.name if occupied is not None else None,
"position": site["position"],
"size": site["size"],
"content_type": site["content_type"],
})
data["sites"] = sites_out
return data
class PRCXI9300Container(Plate): class PRCXI9300Container(Container):
"""PRCXI 9300 的专用 Container 类,继承自 Plate用于槽位定位和未知模块。 """PRCXI 9300 的专用 Container 类,继承自 Plate用于槽位定位和未知模块。
该类定义了 PRCXI 9300 的工作台布局和槽位信息。 该类定义了 PRCXI 9300 的工作台布局和槽位信息。
@@ -116,11 +200,10 @@ class PRCXI9300Container(Plate):
size_y: float, size_y: float,
size_z: float, size_z: float,
category: str, category: str,
ordering: collections.OrderedDict,
model: Optional[str] = None, model: Optional[str] = None,
**kwargs, **kwargs,
): ):
super().__init__(name, size_x, size_y, size_z, category=category, ordering=ordering, model=model) super().__init__(name, size_x, size_y, size_z, category=category, model=model)
self._unilabos_state = {} self._unilabos_state = {}
def load_state(self, state: Dict[str, Any]) -> None: def load_state(self, state: Dict[str, Any]) -> None:
@@ -248,14 +331,15 @@ class PRCXI9300TipRack(TipRack):
if ordered_items is not None: if ordered_items is not None:
items = ordered_items items = ordered_items
elif ordering is not None: elif ordering is not None:
# 检查 ordering 中的值是否是字符串(从 JSON 反序列化时的情况) # 检查 ordering 中的值类型来决定如何处理:
# 如果是字符串,说明这是位置名称,需要让 TipRack 自己创建 Tip 对象 # - 字符串值(从 JSON 反序列化): 只用键创建 ordering_param
# 我们只传递位置信息(键),不传递值,使用 ordering 参数 # - None 值(从第二次往返序列化): 同样只用键创建 ordering_param
if ordering and isinstance(next(iter(ordering.values()), None), str): # - 对象值(已经是实际的 Resource 对象): 直接作为 ordered_items 使用
# ordering 的值是字符串,只使用键(位置信息)创建新的 OrderedDict first_val = next(iter(ordering.values()), None) if ordering else None
if not ordering or first_val is None or isinstance(first_val, str):
# ordering 的值是字符串或 None只使用键位置信息创建新的 OrderedDict
# 传递 ordering 参数而不是 ordered_items让 TipRack 自己创建 Tip 对象 # 传递 ordering 参数而不是 ordered_items让 TipRack 自己创建 Tip 对象
items = None items = None
# 使用 ordering 参数,只包含位置信息(键)
ordering_param = collections.OrderedDict((k, None) for k in ordering.keys()) ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
else: else:
# ordering 的值已经是对象,可以直接使用 # ordering 的值已经是对象,可以直接使用
@@ -397,14 +481,15 @@ class PRCXI9300TubeRack(TubeRack):
items_to_pass = ordered_items items_to_pass = ordered_items
ordering_param = None ordering_param = None
elif ordering is not None: elif ordering is not None:
# 检查 ordering 中的值是否是字符串(从 JSON 反序列化时的情况) # 检查 ordering 中的值类型来决定如何处理:
# 如果是字符串,说明这是位置名称,需要让 TubeRack 自己创建 Tube 对象 # - 字符串值(从 JSON 反序列化): 只用键创建 ordering_param
# 我们只传递位置信息(键),不传递值,使用 ordering 参数 # - None 值(从第二次往返序列化): 同样只用键创建 ordering_param
if ordering and isinstance(next(iter(ordering.values()), None), str): # - 对象值(已经是实际的 Resource 对象): 直接作为 ordered_items 使用
# ordering 的值是字符串,只使用键(位置信息)创建新的 OrderedDict first_val = next(iter(ordering.values()), None) if ordering else None
if not ordering or first_val is None or isinstance(first_val, str):
# ordering 的值是字符串或 None只使用键位置信息创建新的 OrderedDict
# 传递 ordering 参数而不是 ordered_items让 TubeRack 自己创建 Tube 对象 # 传递 ordering 参数而不是 ordered_items让 TubeRack 自己创建 Tube 对象
items_to_pass = None items_to_pass = None
# 使用 ordering 参数,只包含位置信息(键)
ordering_param = collections.OrderedDict((k, None) for k in ordering.keys()) ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
else: else:
# ordering 的值已经是对象,可以直接使用 # ordering 的值已经是对象,可以直接使用
@@ -565,14 +650,14 @@ class PRCXI9300Handler(LiquidHandlerAbstract):
tablets_info = [] tablets_info = []
count = 0 count = 0
for child in deck.children: for child in deck.children:
if child.children: # 如果放其他类型的物料,是不可以的
if "Material" in child.children[0]._unilabos_state: if hasattr(child, "_unilabos_state") and "Material" in child._unilabos_state:
number = int(child.name.replace("T", "")) number = int(child.name.replace("T", ""))
tablets_info.append( tablets_info.append(
WorkTablets( WorkTablets(
Number=number, Code=f"T{number}", Material=child.children[0]._unilabos_state["Material"] Number=number, Code=f"T{number}", Material=child._unilabos_state["Material"]
)
) )
)
if is_9320: if is_9320:
print("当前设备是9320") print("当前设备是9320")
# 始终初始化 step_mode 属性 # 始终初始化 step_mode 属性

View File

@@ -92,7 +92,7 @@ class Registry:
test_resource_method_info = host_node_enhanced_info.get("action_methods", {}).get("test_resource", {}) test_resource_method_info = host_node_enhanced_info.get("action_methods", {}).get("test_resource", {})
test_resource_schema = self._generate_unilab_json_command_schema( test_resource_schema = self._generate_unilab_json_command_schema(
test_resource_method_info.get("args", []), test_resource_method_info.get("args", []),
"auto-test_resource", "test_resource",
test_resource_method_info.get("return_annotation"), test_resource_method_info.get("return_annotation"),
) )
test_resource_schema["description"] = "用于测试物料、设备和样本。" test_resource_schema["description"] = "用于测试物料、设备和样本。"
@@ -175,7 +175,8 @@ class Registry:
"res_id": "unilabos_resources", # 将当前实验室的全部物料id作为下拉框可选择 "res_id": "unilabos_resources", # 将当前实验室的全部物料id作为下拉框可选择
"device_id": "unilabos_devices", # 将当前实验室的全部设备id作为下拉框可选择 "device_id": "unilabos_devices", # 将当前实验室的全部设备id作为下拉框可选择
"parent": "unilabos_nodes", # 将当前实验室的设备/物料作为下拉框可选择 "parent": "unilabos_nodes", # 将当前实验室的设备/物料作为下拉框可选择
"class_name": "unilabos_class", "class_name": "unilabos_class", # 当前实验室物料的class name
"slot_on_deck": "unilabos_resource_slot:parent", # 勾选的parent的config中的sites的name展示name参数对应slotindex
}, },
}, },
"test_latency": { "test_latency": {

View File

@@ -1,10 +1,6 @@
import json
from typing import Dict, Any from typing import Dict, Any
from pylabrobot.resources import Container from pylabrobot.resources import Container
from unilabos_msgs.msg import Resource
from unilabos.ros.msgs.message_converter import convert_from_ros_msg
class RegularContainer(Container): class RegularContainer(Container):
@@ -16,12 +12,12 @@ class RegularContainer(Container):
kwargs["size_y"] = 0 kwargs["size_y"] = 0
if "size_z" not in kwargs: if "size_z" not in kwargs:
kwargs["size_z"] = 0 kwargs["size_z"] = 0
self.kwargs = kwargs self.kwargs = kwargs
self.state = {}
super().__init__(*args, category="container", **kwargs) super().__init__(*args, category="container", **kwargs)
def load_state(self, state: Dict[str, Any]): def load_state(self, state: Dict[str, Any]):
self.state = state super().load_state(state)
def get_regular_container(name="container"): def get_regular_container(name="container"):
@@ -29,7 +25,6 @@ def get_regular_container(name="container"):
r.category = "container" r.category = "container"
return r return r
#
# class RegularContainer(object): # class RegularContainer(object):
# # 第一个参数必须是id传入 # # 第一个参数必须是id传入
# # noinspection PyShadowingBuiltins # # noinspection PyShadowingBuiltins
@@ -89,4 +84,4 @@ def get_regular_container(name="container"):
# return to_dict # return to_dict
# #
# def __str__(self): # def __str__(self):
# return f"{self.id}" # return f"{self.id}"

View File

@@ -76,7 +76,7 @@ def canonicalize_nodes_data(
if sample_id: if sample_id:
logger.error(f"{node}的sample_id参数已弃用sample_id: {sample_id}") logger.error(f"{node}的sample_id参数已弃用sample_id: {sample_id}")
for k in list(node.keys()): for k in list(node.keys()):
if k not in ["id", "uuid", "name", "description", "schema", "model", "icon", "parent_uuid", "parent", "type", "class", "position", "config", "data", "children", "pose"]: if k not in ["id", "uuid", "name", "description", "schema", "model", "icon", "parent_uuid", "parent", "type", "class", "position", "config", "data", "children", "pose", "extra"]:
v = node.pop(k) v = node.pop(k)
node["config"][k] = v node["config"][k] = v
if outer_host_node_id is not None: if outer_host_node_id is not None:

View File

@@ -16,6 +16,7 @@ if TYPE_CHECKING:
EXTRA_CLASS = "unilabos_resource_class" EXTRA_CLASS = "unilabos_resource_class"
FRONTEND_POSE_EXTRA = "unilabos_frontend_pose_extra"
EXTRA_SAMPLE_UUID = "sample_uuid" EXTRA_SAMPLE_UUID = "sample_uuid"
EXTRA_UNILABOS_SAMPLE_UUID = "unilabos_sample_uuid" EXTRA_UNILABOS_SAMPLE_UUID = "unilabos_sample_uuid"
@@ -38,24 +39,60 @@ class LabSample(TypedDict):
extra: Dict[str, Any] extra: Dict[str, Any]
class ResourceDictPositionSizeType(TypedDict):
depth: float
width: float
height: float
class ResourceDictPositionSize(BaseModel): class ResourceDictPositionSize(BaseModel):
depth: float = Field(description="Depth", default=0.0) # z depth: float = Field(description="Depth", default=0.0) # z
width: float = Field(description="Width", default=0.0) # x width: float = Field(description="Width", default=0.0) # x
height: float = Field(description="Height", default=0.0) # y height: float = Field(description="Height", default=0.0) # y
class ResourceDictPositionScaleType(TypedDict):
x: float
y: float
z: float
class ResourceDictPositionScale(BaseModel): class ResourceDictPositionScale(BaseModel):
x: float = Field(description="x scale", default=0.0) x: float = Field(description="x scale", default=0.0)
y: float = Field(description="y scale", default=0.0) y: float = Field(description="y scale", default=0.0)
z: float = Field(description="z scale", default=0.0) z: float = Field(description="z scale", default=0.0)
class ResourceDictPositionObjectType(TypedDict):
x: float
y: float
z: float
class ResourceDictPositionObject(BaseModel): class ResourceDictPositionObject(BaseModel):
x: float = Field(description="X coordinate", default=0.0) x: float = Field(description="X coordinate", default=0.0)
y: float = Field(description="Y coordinate", default=0.0) y: float = Field(description="Y coordinate", default=0.0)
z: float = Field(description="Z coordinate", default=0.0) z: float = Field(description="Z coordinate", default=0.0)
class ResourceDictPoseExtraObjectType(BaseModel):
z_index: int
class ResourceDictPoseExtraObject(BaseModel):
z_index: Optional[int] = Field(alias="zIndex", default=None)
class ResourceDictPositionType(TypedDict):
size: ResourceDictPositionSizeType
scale: ResourceDictPositionScaleType
layout: Literal["2d", "x-y", "z-y", "x-z"]
position: ResourceDictPositionObjectType
position3d: ResourceDictPositionObjectType
rotation: ResourceDictPositionObjectType
cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"]
class ResourceDictPosition(BaseModel): class ResourceDictPosition(BaseModel):
size: ResourceDictPositionSize = Field(description="Resource size", default_factory=ResourceDictPositionSize) size: ResourceDictPositionSize = Field(description="Resource size", default_factory=ResourceDictPositionSize)
scale: ResourceDictPositionScale = Field(description="Resource scale", default_factory=ResourceDictPositionScale) scale: ResourceDictPositionScale = Field(description="Resource scale", default_factory=ResourceDictPositionScale)
@@ -72,6 +109,25 @@ class ResourceDictPosition(BaseModel):
cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"] = Field( cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"] = Field(
description="Cross section type", default="rectangle" description="Cross section type", default="rectangle"
) )
extra: Optional[ResourceDictPoseExtraObject] = Field(description="Extra data", default=None)
class ResourceDictType(TypedDict):
id: str
uuid: str
name: str
description: str
resource_schema: Dict[str, Any]
model: Dict[str, Any]
icon: str
parent_uuid: Optional[str]
parent: Optional["ResourceDictType"]
type: Union[Literal["device"], str]
klass: str
pose: ResourceDictPositionType
config: Dict[str, Any]
data: Dict[str, Any]
extra: Dict[str, Any]
# 统一的资源字典模型parent 自动序列化为 parent_uuidchildren 不序列化 # 统一的资源字典模型parent 自动序列化为 parent_uuidchildren 不序列化
@@ -365,6 +421,15 @@ class ResourceTreeSet(object):
"tip_spot": "tip_spot", "tip_spot": "tip_spot",
"tube": "tube", "tube": "tube",
"bottle_carrier": "bottle_carrier", "bottle_carrier": "bottle_carrier",
"material_hole": "material_hole",
"container": "container",
"material_plate": "material_plate",
"electrode_sheet": "electrode_sheet",
"warehouse": "warehouse",
"magazine_holder": "magazine_holder",
"resource_group": "resource_group",
"trash": "trash",
"plate_adapter": "plate_adapter",
} }
if source in replace_info: if source in replace_info:
return replace_info[source] return replace_info[source]
@@ -408,6 +473,7 @@ class ResourceTreeSet(object):
"position3d": raw_pos, "position3d": raw_pos,
"rotation": d["rotation"], "rotation": d["rotation"],
"cross_section_type": d.get("cross_section_type", "rectangle"), "cross_section_type": d.get("cross_section_type", "rectangle"),
"extra": extra.get(FRONTEND_POSE_EXTRA)
} }
# 先构建当前节点的字典不包含children # 先构建当前节点的字典不包含children
@@ -493,6 +559,7 @@ class ResourceTreeSet(object):
name_to_uuid[node.res_content.name] = node.res_content.uuid name_to_uuid[node.res_content.name] = node.res_content.uuid
all_states[node.res_content.name] = node.res_content.data all_states[node.res_content.name] = node.res_content.data
name_to_extra[node.res_content.name] = node.res_content.extra name_to_extra[node.res_content.name] = node.res_content.extra
name_to_extra[node.res_content.name][FRONTEND_POSE_EXTRA] = node.res_content.pose.extra
name_to_extra[node.res_content.name][EXTRA_CLASS] = node.res_content.klass name_to_extra[node.res_content.name][EXTRA_CLASS] = node.res_content.klass
for child in node.children: for child in node.children:
collect_node_data(child, name_to_uuid, all_states, name_to_extra) collect_node_data(child, name_to_uuid, all_states, name_to_extra)
@@ -561,7 +628,7 @@ class ResourceTreeSet(object):
plr_resources.append(plr_resource) plr_resources.append(plr_resource)
except Exception as e: except Exception as e:
logger.error(f"转换 PLR 资源失败: {e}") logger.error(f"转换 PLR 资源失败: {e} {str(plr_dict)[:1000]}")
import traceback import traceback
logger.error(f"堆栈: {traceback.format_exc()}") logger.error(f"堆栈: {traceback.format_exc()}")

View File

@@ -460,7 +460,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
} }
res.response = json.dumps(final_response) res.response = json.dumps(final_response)
# 如果driver自己就有assign的方法那就使用driver自己的assign方法 # 如果driver自己就有assign的方法那就使用driver自己的assign方法
if hasattr(self.driver_instance, "create_resource"): if hasattr(self.driver_instance, "create_resource") and self.node_name != "host_node":
create_resource_func = getattr(self.driver_instance, "create_resource") create_resource_func = getattr(self.driver_instance, "create_resource")
try: try:
ret = create_resource_func( ret = create_resource_func(
@@ -915,8 +915,24 @@ class BaseROS2DeviceNode(Node, Generic[T]):
else [] else []
) )
if target_site is not None and sites is not None and site_names is not None: if target_site is not None and sites is not None and site_names is not None:
site_index = sites.index(original_instance) site_index = None
site_name = site_names[site_index] try:
# sites 可能是 Resource 列表或 dict 列表 (如 PRCXI9300Deck)
# 只有itemized_carrier在使用准备弃用
site_index = sites.index(original_instance)
except ValueError:
# dict 类型的 sites: 通过name匹配
for idx, site in enumerate(sites):
if original_instance.name == site["occupied_by"]:
site_index = idx
break
elif (original_instance.location.x == site["position"]["x"] and original_instance.location.y == site["position"]["y"] and original_instance.location.z == site["position"]["z"]):
site_index = idx
break
if site_index is None:
site_name = None
else:
site_name = site_names[site_index]
if site_name != target_site: if site_name != target_site:
parent = self.transfer_to_new_resource(original_instance, tree, additional_add_params) parent = self.transfer_to_new_resource(original_instance, tree, additional_add_params)
if parent is not None: if parent is not None:
@@ -924,6 +940,14 @@ class BaseROS2DeviceNode(Node, Generic[T]):
parent_appended = True parent_appended = True
# 加载状态 # 加载状态
# noinspection PyProtectedMember
original_instance._size_x = plr_resource._size_x
# noinspection PyProtectedMember
original_instance._size_y = plr_resource._size_y
# noinspection PyProtectedMember
original_instance._size_z = plr_resource._size_z
# noinspection PyProtectedMember
original_instance._local_size_z = plr_resource._local_size_z
original_instance.location = plr_resource.location original_instance.location = plr_resource.location
original_instance.rotation = plr_resource.rotation original_instance.rotation = plr_resource.rotation
original_instance.barcode = plr_resource.barcode original_instance.barcode = plr_resource.barcode
@@ -984,7 +1008,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
].call_async( ].call_async(
r r
) # type: ignore ) # type: ignore
self.lab_logger().info(f"确认资源云端 Add 结果: {response.response}") self.lab_logger().trace(f"确认资源云端 Add 结果: {response.response}")
results.append(result) results.append(result)
elif action == "update": elif action == "update":
if tree_set is None: if tree_set is None:
@@ -1010,7 +1034,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
].call_async( ].call_async(
r r
) # type: ignore ) # type: ignore
self.lab_logger().info(f"确认资源云端 Update 结果: {response.response}") self.lab_logger().trace(f"确认资源云端 Update 结果: {response.response}")
results.append(result) results.append(result)
elif action == "remove": elif action == "remove":
result = _handle_remove(resources_uuid) result = _handle_remove(resources_uuid)

View File

@@ -35,7 +35,7 @@ from unilabos.resources.resource_tracker import (
ResourceTreeInstance, ResourceTreeInstance,
RETURN_UNILABOS_SAMPLES, RETURN_UNILABOS_SAMPLES,
JSON_UNILABOS_PARAM, JSON_UNILABOS_PARAM,
PARAM_SAMPLE_UUIDS, PARAM_SAMPLE_UUIDS, SampleUUIDsType, LabSample,
) )
from unilabos.ros.initialize_device import initialize_device_from_dict from unilabos.ros.initialize_device import initialize_device_from_dict
from unilabos.ros.msgs.message_converter import ( from unilabos.ros.msgs.message_converter import (
@@ -65,6 +65,7 @@ class DeviceActionStatus:
class TestResourceReturn(TypedDict): class TestResourceReturn(TypedDict):
resources: List[List[ResourceDict]] resources: List[List[ResourceDict]]
devices: List[Dict[str, Any]] devices: List[Dict[str, Any]]
unilabos_samples: List[LabSample]
class TestLatencyReturn(TypedDict): class TestLatencyReturn(TypedDict):
@@ -1194,7 +1195,7 @@ class HostNode(BaseROS2DeviceNode):
self.lab_logger().info(f"[Host Node-Resource] UUID映射: {len(uuid_mapping)} 个节点") self.lab_logger().info(f"[Host Node-Resource] UUID映射: {len(uuid_mapping)} 个节点")
# 还需要加入到资源图中,暂不实现,考虑资源图新的获取方式 # 还需要加入到资源图中,暂不实现,考虑资源图新的获取方式
response.response = json.dumps(uuid_mapping) response.response = json.dumps(uuid_mapping)
self.lab_logger().info(f"[Host Node-Resource] Resource tree add completed, success: {success}") self.lab_logger().info(f"[Host Node-Resource] Resource tree update completed, success: {success}")
async def _resource_tree_update_callback(self, request: SerialCommand_Request, response: SerialCommand_Response): async def _resource_tree_update_callback(self, request: SerialCommand_Request, response: SerialCommand_Response):
""" """
@@ -1582,6 +1583,7 @@ class HostNode(BaseROS2DeviceNode):
def test_resource( def test_resource(
self, self,
sample_uuids: SampleUUIDsType,
resource: ResourceSlot = None, resource: ResourceSlot = None,
resources: List[ResourceSlot] = None, resources: List[ResourceSlot] = None,
device: DeviceSlot = None, device: DeviceSlot = None,
@@ -1596,6 +1598,7 @@ class HostNode(BaseROS2DeviceNode):
return { return {
"resources": ResourceTreeSet.from_plr_resources([resource, *resources], known_newly_created=True).dump(), "resources": ResourceTreeSet.from_plr_resources([resource, *resources], known_newly_created=True).dump(),
"devices": [device, *devices], "devices": [device, *devices],
"unilabos_samples": [LabSample(sample_uuid=sample_uuid, oss_path="", extra={"material_uuid": content} if isinstance(content, str) else content.serialize()) for sample_uuid, content in sample_uuids.items()]
} }
def handle_pong_response(self, pong_data: dict): def handle_pong_response(self, pong_data: dict):

File diff suppressed because it is too large Load Diff

View File

@@ -26,7 +26,7 @@
res_id: plate_slot_{slot} res_id: plate_slot_{slot}
device_id: /PRCXI device_id: /PRCXI
class_name: PRCXI_BioER_96_wellplate class_name: PRCXI_BioER_96_wellplate
parent: /PRCXI/PRCXI_Deck/T{slot} parent: /PRCXI/PRCXI_Deck
slot_on_deck: "{slot}" slot_on_deck: "{slot}"
- 输出端口: labware用于连接 set_liquid_from_plate - 输出端口: labware用于连接 set_liquid_from_plate
- 控制流: create_resource 之间通过 ready 端口串联 - 控制流: create_resource 之间通过 ready 端口串联
@@ -122,7 +122,7 @@ NODE_TYPE_DEFAULT = "ILab" # 所有节点的默认类型
# create_resource 节点默认参数 # create_resource 节点默认参数
CREATE_RESOURCE_DEFAULTS = { CREATE_RESOURCE_DEFAULTS = {
"device_id": "/PRCXI", "device_id": "/PRCXI",
"parent_template": "/PRCXI/PRCXI_Deck/T{slot}", # {slot} 会被替换为实际的 slot 值 "parent_template": "/PRCXI/PRCXI_Deck",
"class_name": "PRCXI_BioER_96_wellplate", "class_name": "PRCXI_BioER_96_wellplate",
} }
@@ -424,7 +424,7 @@ def build_protocol_graph(
"res_id": res_id, "res_id": res_id,
"device_id": CREATE_RESOURCE_DEFAULTS["device_id"], "device_id": CREATE_RESOURCE_DEFAULTS["device_id"],
"class_name": lw_type, "class_name": lw_type,
"parent": CREATE_RESOURCE_DEFAULTS["parent_template"].format(slot=slot), "parent": CREATE_RESOURCE_DEFAULTS["parent_template"],
"bind_locations": {"x": 0.0, "y": 0.0, "z": 0.0}, "bind_locations": {"x": 0.0, "y": 0.0, "z": 0.0},
"slot_on_deck": slot, "slot_on_deck": slot,
}, },

View File

@@ -2,7 +2,7 @@
<?xml-model href="http://download.ros.org/schema/package_format3.xsd" schematypens="http://www.w3.org/2001/XMLSchema"?> <?xml-model href="http://download.ros.org/schema/package_format3.xsd" schematypens="http://www.w3.org/2001/XMLSchema"?>
<package format="3"> <package format="3">
<name>unilabos_msgs</name> <name>unilabos_msgs</name>
<version>0.10.17</version> <version>0.10.18</version>
<description>ROS2 Messages package for unilabos devices</description> <description>ROS2 Messages package for unilabos devices</description>
<maintainer email="changjh@pku.edu.cn">Junhan Chang</maintainer> <maintainer email="changjh@pku.edu.cn">Junhan Chang</maintainer>
<maintainer email="18435084+Xuwznln@users.noreply.github.com">Xuwznln</maintainer> <maintainer email="18435084+Xuwznln@users.noreply.github.com">Xuwznln</maintainer>