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https://github.com/deepmodeling/Uni-Lab-OS
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45efbfcd12
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8a0116c852 |
@@ -21,7 +21,7 @@ from pylabrobot.resources import (
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ResourceHolder,
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ResourceHolder,
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Lid,
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Lid,
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Trash,
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Trash,
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Tip,
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Tip, TubeRack,
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)
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)
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from typing_extensions import TypedDict
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from typing_extensions import TypedDict
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@@ -696,10 +696,13 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
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如果 liquid_names 和 volumes 为空,但 plate 和 well_names 不为空,直接返回 plate 和 wells。
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如果 liquid_names 和 volumes 为空,但 plate 和 well_names 不为空,直接返回 plate 和 wells。
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"""
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"""
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assert issubclass(plate.__class__, Plate), "plate must be a Plate"
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assert issubclass(plate.__class__, Plate) or issubclass(plate.__class__, TubeRack) , f"plate must be a Plate, now: {type(plate)}"
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plate: Plate = cast(Plate, cast(Resource, plate))
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plate: Union[Plate, TubeRack]
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# 根据 well_names 获取对应的 Well 对象
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# 根据 well_names 获取对应的 Well 对象
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wells = [plate.get_well(name) for name in well_names]
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if issubclass(plate.__class__, Plate):
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wells = [plate.get_well(name) for name in well_names]
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elif issubclass(plate.__class__, TubeRack):
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wells = [plate.get_tube(name) for name in well_names]
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res_volumes = []
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res_volumes = []
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# 如果 liquid_names 和 volumes 都为空,直接返回
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# 如果 liquid_names 和 volumes 都为空,直接返回
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@@ -91,7 +91,7 @@ class PRCXI9300Deck(Deck):
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"""
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"""
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def __init__(self, name: str, size_x: float, size_y: float, size_z: float, **kwargs):
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def __init__(self, name: str, size_x: float, size_y: float, size_z: float, **kwargs):
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super().__init__(name, size_x, size_y, size_z)
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super().__init__(size_x, size_y, size_z, name)
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self.slots = [None] * 16 # PRCXI 9300/9320 最大有 16 个槽位
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self.slots = [None] * 16 # PRCXI 9300/9320 最大有 16 个槽位
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self.slot_locations = [Coordinate(0, 0, 0)] * 16
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self.slot_locations = [Coordinate(0, 0, 0)] * 16
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@@ -248,14 +248,15 @@ class PRCXI9300TipRack(TipRack):
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if ordered_items is not None:
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if ordered_items is not None:
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items = ordered_items
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items = ordered_items
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elif ordering is not None:
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elif ordering is not None:
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# 检查 ordering 中的值是否是字符串(从 JSON 反序列化时的情况)
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# 检查 ordering 中的值类型来决定如何处理:
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# 如果是字符串,说明这是位置名称,需要让 TipRack 自己创建 Tip 对象
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# - 字符串值(从 JSON 反序列化): 只用键创建 ordering_param
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# 我们只传递位置信息(键),不传递值,使用 ordering 参数
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# - None 值(从第二次往返序列化): 同样只用键创建 ordering_param
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if ordering and isinstance(next(iter(ordering.values()), None), str):
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# - 对象值(已经是实际的 Resource 对象): 直接作为 ordered_items 使用
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# ordering 的值是字符串,只使用键(位置信息)创建新的 OrderedDict
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first_val = next(iter(ordering.values()), None) if ordering else None
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if not ordering or first_val is None or isinstance(first_val, str):
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# ordering 的值是字符串或 None,只使用键(位置信息)创建新的 OrderedDict
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# 传递 ordering 参数而不是 ordered_items,让 TipRack 自己创建 Tip 对象
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# 传递 ordering 参数而不是 ordered_items,让 TipRack 自己创建 Tip 对象
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items = None
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items = None
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# 使用 ordering 参数,只包含位置信息(键)
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ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
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ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
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else:
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else:
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# ordering 的值已经是对象,可以直接使用
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# ordering 的值已经是对象,可以直接使用
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@@ -397,14 +398,15 @@ class PRCXI9300TubeRack(TubeRack):
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items_to_pass = ordered_items
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items_to_pass = ordered_items
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ordering_param = None
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ordering_param = None
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elif ordering is not None:
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elif ordering is not None:
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# 检查 ordering 中的值是否是字符串(从 JSON 反序列化时的情况)
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# 检查 ordering 中的值类型来决定如何处理:
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# 如果是字符串,说明这是位置名称,需要让 TubeRack 自己创建 Tube 对象
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# - 字符串值(从 JSON 反序列化): 只用键创建 ordering_param
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# 我们只传递位置信息(键),不传递值,使用 ordering 参数
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# - None 值(从第二次往返序列化): 同样只用键创建 ordering_param
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if ordering and isinstance(next(iter(ordering.values()), None), str):
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# - 对象值(已经是实际的 Resource 对象): 直接作为 ordered_items 使用
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# ordering 的值是字符串,只使用键(位置信息)创建新的 OrderedDict
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first_val = next(iter(ordering.values()), None) if ordering else None
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if not ordering or first_val is None or isinstance(first_val, str):
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# ordering 的值是字符串或 None,只使用键(位置信息)创建新的 OrderedDict
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# 传递 ordering 参数而不是 ordered_items,让 TubeRack 自己创建 Tube 对象
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# 传递 ordering 参数而不是 ordered_items,让 TubeRack 自己创建 Tube 对象
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items_to_pass = None
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items_to_pass = None
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# 使用 ordering 参数,只包含位置信息(键)
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ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
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ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
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else:
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else:
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# ordering 的值已经是对象,可以直接使用
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# ordering 的值已经是对象,可以直接使用
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6884
unilabos/registry/resources/opentrons/lab.yaml
Normal file
6884
unilabos/registry/resources/opentrons/lab.yaml
Normal file
File diff suppressed because it is too large
Load Diff
3681
unilabos/resources/lab_resources.py
Normal file
3681
unilabos/resources/lab_resources.py
Normal file
File diff suppressed because it is too large
Load Diff
1
unilabos/resources/opentrons_custom_labware_defs.json
Normal file
1
unilabos/resources/opentrons_custom_labware_defs.json
Normal file
File diff suppressed because one or more lines are too long
@@ -460,7 +460,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
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}
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}
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res.response = json.dumps(final_response)
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res.response = json.dumps(final_response)
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# 如果driver自己就有assign的方法,那就使用driver自己的assign方法
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# 如果driver自己就有assign的方法,那就使用driver自己的assign方法
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if hasattr(self.driver_instance, "create_resource"):
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if hasattr(self.driver_instance, "create_resource") and self.node_name != "host_node":
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create_resource_func = getattr(self.driver_instance, "create_resource")
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create_resource_func = getattr(self.driver_instance, "create_resource")
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try:
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try:
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ret = create_resource_func(
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ret = create_resource_func(
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