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16 Commits

Author SHA1 Message Date
Xuwznln
d266d21104 Update repo files.
(cherry picked from commit 48895a9bb1)
2025-11-15 03:16:04 +08:00
Xuwznln
b6d0bbcb17 bump version to 0.10.10 2025-11-15 03:10:31 +08:00
Xuwznln
31ebff8e37 Update devices 2025-11-15 03:10:05 +08:00
WenzheG
2132895ba2 nmr 2025-11-15 03:02:23 +08:00
ZiWei
850eeae55a HR物料同步,前端展示位置修复 (#135)
* 更新Bioyond工作站配置,添加新的物料类型映射和载架定义,优化物料查询逻辑

* 添加Bioyond实验配置文件,定义物料类型映射和设备配置

* 更新bioyond_warehouse_reagent_stack方法,修正试剂堆栈尺寸和布局描述

* 更新Bioyond实验配置,修正物料类型映射,优化设备配置

* 更新Bioyond资源同步逻辑,优化物料入库流程,增强错误处理和日志记录

* 更新Bioyond资源,添加配液站和反应站专用载架,优化仓库工厂函数的排序方式

* 更新Bioyond资源,添加配液站和反应站相关载架,优化试剂瓶和样品瓶配置

* 更新Bioyond实验配置,修正试剂瓶载架ID,确保与设备匹配

* 更新Bioyond资源,移除反应站单烧杯载架,添加反应站单烧瓶载架分类

* Refactor Bioyond resource synchronization and update bottle carrier definitions

- Removed traceback printing in error handling for Bioyond synchronization.
- Enhanced logging for existing Bioyond material ID usage during synchronization.
- Added new bottle carrier definitions for single flask and updated existing ones.
- Refactored dispensing station and reaction station bottle definitions for clarity and consistency.
- Improved resource mapping and error handling in graphio for Bioyond resource conversion.
- Introduced layout parameter in warehouse factory for better warehouse configuration.

* 更新Bioyond仓库工厂,添加排序方式支持,优化坐标计算逻辑

* 更新Bioyond载架和甲板配置,调整样品板尺寸和仓库坐标

* 更新Bioyond资源同步,增强占用位置日志信息,修正坐标转换逻辑

* 更新Bioyond反应站和分配站配置,调整材料类型映射和ID,移除不必要的项

* support name change during materials change

* fix json dumps

* correct tip

* 优化调度器API路径,更新相关方法描述

* 更新 BIOYOND 载架相关文档,调整 API 以支持自带试剂瓶的载架类型,修复资源获取时的子物料处理逻辑

* 实现资源删除时的同步处理,优化出库操作逻辑

* 修复 ItemizedCarrier 中的可见性逻辑

* 保存 Bioyond 原始信息到 unilabos_extra,以便出库时查询

* 根据 resource.capacity 判断是试剂瓶(载架)还是多瓶载架,走不同的奔曜转换

* Fix bioyond bottle_carriers ordering

* 优化 Bioyond 物料同步逻辑,增强坐标解析和位置更新处理

* disable slave connect websocket

* correct remove_resource stats

* change uuid logger to trace level

* enable slave mode

* refactor(bioyond): 统一资源命名并优化物料同步逻辑

- 将DispensingStation和ReactionStation资源统一为PolymerStation命名
- 优化物料同步逻辑,支持耗材类型(typeMode=0)的查询
- 添加物料默认参数配置功能
- 调整仓库坐标布局
- 清理废弃资源定义

* feat(warehouses): 为仓库函数添加col_offset和layout参数

* refactor: 更新实验配置中的物料类型映射命名

将DispensingStation和ReactionStation的物料类型映射统一更名为PolymerStation,保持命名一致性

* fix: 更新实验配置中的载体名称从6VialCarrier到6StockCarrier

* feat(bioyond): 实现物料创建与入库分离逻辑

将物料同步流程拆分为两个独立阶段:transfer阶段只创建物料,add阶段执行入库
简化状态检查接口,仅返回连接状态

* fix(reaction_station): 修正液体进料烧杯体积单位并增强返回结果

将液体进料烧杯的体积单位从μL改为g以匹配实际使用场景
在返回结果中添加merged_workflow和order_params字段,提供更完整的工作流信息

* feat(dispensing_station): 在任务创建返回结果中添加order_params信息

在create_order方法返回结果中增加order_params字段,以便调用方获取完整的任务参数

* fix(dispensing_station): 修改90%物料分配逻辑从分成3份改为直接使用

原逻辑将主称固体平均分成3份作为90%物料,现改为直接使用main_portion

* feat(bioyond): 添加任务编码和任务ID的输出,支持批量任务创建后的状态监控

* refactor(registry): 简化设备配置中的任务结果处理逻辑

将多个单独的任务编码和ID字段合并为统一的return_info字段
更新相关描述以反映新的数据结构

* feat(工作站): 添加HTTP报送服务和任务完成状态跟踪

- 在graphio.py中添加API必需字段
- 实现工作站HTTP服务启动和停止逻辑
- 添加任务完成状态跟踪字典和等待方法
- 重写任务完成报送处理方法记录状态
- 支持批量任务完成等待和报告获取

* refactor(dispensing_station): 移除wait_for_order_completion_and_get_report功能

该功能已被wait_for_multiple_orders_and_get_reports替代,简化代码结构

* fix: 更新任务报告API错误

* fix(workstation_http_service): 修复状态查询中device_id获取逻辑

处理状态查询时安全获取device_id,避免因属性不存在导致的异常

* fix(bioyond_studio): 改进物料入库失败时的错误处理和日志记录

在物料入库API调用失败时,添加更详细的错误信息打印
同时修正station.py中对空响应和失败情况的判断逻辑

* refactor(bioyond): 优化瓶架载体的分配逻辑和注释说明

重构瓶架载体的分配逻辑,使用嵌套循环替代硬编码索引分配
添加更详细的坐标映射说明,明确PLR与Bioyond坐标的对应关系

* fix(bioyond_rpc): 修复物料入库成功时无data字段返回空的问题

当API返回成功但无data字段时,返回包含success标识的字典而非空字典

---------

Co-authored-by: Xuwznln <18435084+Xuwznln@users.noreply.github.com>
Co-authored-by: Junhan Chang <changjh@dp.tech>
2025-11-15 02:57:48 +08:00
xyc
d869c14233 add new laiyu liquid driver, yaml and json files (#164) 2025-11-15 02:52:19 +08:00
Harry Liu
24101b3cec change 9320 desk row number to 4 (#106)
* change 9320 desk row number to 4

* Updated 9320 host address

* Updated 9320 host address

* Add **kwargs in classes: PRCXI9300Deck and PRCXI9300Container

* Removed all sample_id in prcxi_9320.json to avoid KeyError

* 9320 machine testing settings

* Typo
2025-11-15 02:52:08 +08:00
tt
3bf8aad4d5 标准化opcua设备接入unilab (#78)
* 初始提交,只保留工作区当前状态

* remove redundant arm_slider meshes

---------

Co-authored-by: Junhan Chang <changjh@dp.tech>
2025-11-15 02:50:52 +08:00
q434343
a599eb70e5 3d sim (#97)
* 修改lh的json启动

* 修改lh的json启动

* 修改backend,做成sim的通用backend

* 修改yaml的地址,3D模型适配网页生产环境

* 添加laiyu硬件连接

* 修改移液枪的状态判断方法,

修改移液枪的状态判断方法,
添加三轴的表定点与零点之间的转换
添加三轴真实移动的backend

* 修改laiyu移液站

简化移动方法,
取消软件限制位置,
修改当值使用Z轴时也需要重新复位Z轴的问题

* 更新lh以及laiyu workshop

1,现在可以直接通过修改backend,适配其他的移液站,主类依旧使用LiquidHandler,不用重新编写

2,修改枪头判断标准,使用枪头自身判断而不是类的判断,

3,将归零参数用毫米计算,方便手动调整,

4,修改归零方式,上电使用机械归零,确定机械零点,手动归零设置工作区域零点方便计算,二者互不干涉

* 修改枪头动作

* 修改虚拟仿真方法

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: Junhan Chang <changjh@dp.tech>
2025-11-15 02:50:17 +08:00
lixinyu1011
0bf6994f95 1114物料手册定义教程byxinyu (#165)
* 宜宾奔耀工站deck前端by_Xinyu

* 构建物料教程byxinyu

* 1114物料手册定义教程
2025-11-15 02:49:17 +08:00
Harry Liu
c36f53791c PRCXI Reset Error Correction (#166)
* change 9320 desk row number to 4

* Updated 9320 host address

* Updated 9320 host address

* Add **kwargs in classes: PRCXI9300Deck and PRCXI9300Container

* Removed all sample_id in prcxi_9320.json to avoid KeyError

* 9320 machine testing settings

* Typo

* Rewrite setup logic to clear error code

* 初始化 step_mode 属性
2025-11-15 02:48:46 +08:00
Xuwznln
eb4d2d96c5 bump version to 0.10.9 2025-11-15 02:28:59 +08:00
Xuwznln
8233c41b1d update registry 2025-11-15 02:27:44 +08:00
Xuwznln
0dfd4ce8a8 correct bioyond config 2025-11-15 02:27:32 +08:00
WenzheG
7953b3820e 添加Raman和xrd相关代码 2025-11-15 02:23:09 +08:00
Guangxin Zhang
eed233fa76 封膜仪、撕膜仪、耗材站接口 2025-11-15 02:14:45 +08:00
171 changed files with 28059 additions and 2162 deletions

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@@ -1,6 +1,6 @@
package:
name: unilabos
version: 0.10.7
version: 0.10.10
source:
path: ../unilabos

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156 Xuwznln <18435084+Xuwznln@users.noreply.github.com>
39 Junhan Chang <changjh@dp.tech>
9 wznln <18435084+Xuwznln@users.noreply.github.com>
8 Guangxin Zhang <guangxin.zhang.bio@gmail.com>
56 Xuwznln <18435084+Xuwznln@users.noreply.github.com>
10 wznln <18435084+Xuwznln@users.noreply.github.com>
6 Junhan Chang <changjh@dp.tech>
5 ZiWei <131428629+ZiWei09@users.noreply.github.com>
2 Guangxin Zhang <guangxin.zhang.bio@gmail.com>
2 Junhan Chang <changjh@pku.edu.cn>
2 Xie Qiming <97236197+Andy6M@users.noreply.github.com>
2 WenzheG <wenzheguo32@gmail.com>
1 Harry Liu <113173203+ALITTLELZ@users.noreply.github.com>
1 Harvey Que <103566763+Mile-Away@users.noreply.github.com>
1 Junhan Chang <1700011741@pku.edu.cn>
1 LccLink <1951855008@qq.com>
1 h840473807 <47357934+h840473807@users.noreply.github.com>
1 Xianwei Qi <qxw@stu.pku.edu.cn>
1 hh.(SII) <103566763+Mile-Away@users.noreply.github.com>
1 lixinyu1011 <61094742+lixinyu1011@users.noreply.github.com>
1 shiyubo0410 <shiyubo@dp.tech>
1 q434343 <73513873+q434343@users.noreply.github.com>
1 tt <166512503+tt11142023@users.noreply.github.com>
1 xyc <49015816+xiaoyu10031@users.noreply.github.com>
1 王俊杰 <1800011822@pku.edu.cn>
1 王俊杰 <43375851+wjjxxx@users.noreply.github.com>

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# 物料构建指南
## 概述
在UniLab-OS系统中任何工作站中所需要用到的物料主要包括四个核心组件
1. **桌子Deck** - 工作台面,定义整个工作空间的布局
2. **堆栈Warehouse** - 存储区域,用于放置载具和物料
3. **载具Carriers** - 承载瓶子等物料的容器架
4. **瓶子Bottles** - 实际的物料容器
本文档以BioYond工作站为例详细说明如何构建这些物料组件。
## 文件结构
物料定义文件位于 `unilabos/resources/` 文件夹中:
```
unilabos/resources/bioyond/
├── decks.py # 桌子定义
├── YB_warehouses.py # 堆栈定义
├── YB_bottle_carriers.py # 载具定义
└── YB_bottles.py # 瓶子定义
```
对应的注册表文件位于 `unilabos/registry/resources/bioyond/` 文件夹中:
```
unilabos/registry/resources/bioyond/
├── deck.yaml # 桌子注册表
├── YB_bottle_carriers.yaml # 载具注册表
└── YB_bottle.yaml # 瓶子注册表
```
## 1. 桌子Deck构建
桌子是整个工作站的基础,定义了工作空间的尺寸和各个组件的位置。
### 代码示例 (decks.py)
```python
from pylabrobot.resources import Coordinate, Deck
from unilabos.resources.bioyond.YB_warehouses import (
bioyond_warehouse_2x2x1,
bioyond_warehouse_3x5x1,
bioyond_warehouse_20x1x1,
bioyond_warehouse_3x3x1,
bioyond_warehouse_10x1x1
)
class BIOYOND_YB_Deck(Deck):
def __init__(
self,
name: str = "YB_Deck",
size_x: float = 4150, # 桌子X方向尺寸 (mm)
size_y: float = 1400.0, # 桌子Y方向尺寸 (mm)
size_z: float = 2670.0, # 桌子Z方向尺寸 (mm)
category: str = "deck",
setup: bool = False
) -> None:
super().__init__(name=name, size_x=4150.0, size_y=1400.0, size_z=2670.0)
if setup:
self.setup() # 当在工作站配置中setup为True时自动创建并放置所有预定义的堆栈
def setup(self) -> None:
# 定义桌子上的各个仓库区域
self.warehouses = {
"自动堆栈-左": bioyond_warehouse_2x2x1("自动堆栈-左"),
"自动堆栈-右": bioyond_warehouse_2x2x1("自动堆栈-右"),
"手动堆栈-左": bioyond_warehouse_3x5x1("手动堆栈-左"),
"手动堆栈-右": bioyond_warehouse_3x5x1("手动堆栈-右"),
"粉末加样头堆栈": bioyond_warehouse_20x1x1("粉末加样头堆栈"),
"配液站内试剂仓库": bioyond_warehouse_3x3x1("配液站内试剂仓库"),
"试剂替换仓库": bioyond_warehouse_10x1x1("试剂替换仓库"),
}
# 定义各个仓库在桌子上的坐标位置
self.warehouse_locations = {
"自动堆栈-左": Coordinate(-100.3, 171.5, 0.0),
"自动堆栈-右": Coordinate(3960.1, 155.9, 0.0),
"手动堆栈-左": Coordinate(-213.3, 804.4, 0.0),
"手动堆栈-右": Coordinate(3960.1, 807.6, 0.0),
"粉末加样头堆栈": Coordinate(415.0, 1301.0, 0.0),
"配液站内试剂仓库": Coordinate(2162.0, 437.0, 0.0),
"试剂替换仓库": Coordinate(1173.0, 802.0, 0.0),
}
# 将仓库分配到桌子的指定位置
for warehouse_name, warehouse in self.warehouses.items():
self.assign_child_resource(warehouse, location=self.warehouse_locations[warehouse_name])
```
### 在工作站配置中的使用
当在工作站配置文件中定义桌子时,可以通过`setup`参数控制是否自动建立所有堆栈:
```json
{
"id": "YB_Bioyond_Deck",
"name": "YB_Bioyond_Deck",
"children": [],
"parent": "bioyond_cell_workstation",
"type": "deck",
"class": "BIOYOND_YB_Deck",
"config": {
"type": "BIOYOND_YB_Deck",
"setup": true
},
"data": {}
}
```
**重要说明**
-`"setup": true` 时,系统会自动调用桌子的 `setup()` 方法
- 这将创建并放置所有预定义的堆栈到桌子上的指定位置
- 如果 `"setup": false` 或省略该参数,则只创建空桌子,需要手动添加堆栈
### 关键要点注释
- `size_x`, `size_y`, `size_z`: 定义桌子的物理尺寸
- `warehouses`: 字典类型,包含桌子上所有的仓库区域
- `warehouse_locations`: 定义每个仓库在桌子坐标系中的位置
- `assign_child_resource()`: 将仓库资源分配到桌子的指定位置
- `setup()`: 可选的自动设置方法,初始化时可调用
## 2. 堆栈Warehouse构建
堆栈定义了存储区域的规格和布局,用于放置载具。
### 代码示例 (YB_warehouses.py)
```python
from unilabos.resources.warehouse import WareHouse, YB_warehouse_factory
def bioyond_warehouse_1x4x4(name: str) -> WareHouse:
"""创建BioYond 1x4x4仓库
Args:
name: 仓库名称
Returns:
WareHouse: 仓库对象
"""
return YB_warehouse_factory(
name=name,
num_items_x=1, # X方向位置数量
num_items_y=4, # Y方向位置数量
num_items_z=4, # Z方向位置数量层数
dx=10.0, # X方向起始偏移
dy=10.0, # Y方向起始偏移
dz=10.0, # Z方向起始偏移
item_dx=137.0, # X方向间距
item_dy=96.0, # Y方向间距
item_dz=120.0, # Z方向间距层高
category="warehouse",
)
def bioyond_warehouse_2x2x1(name: str) -> WareHouse:
"""创建BioYond 2x2x1仓库自动堆栈"""
return YB_warehouse_factory(
name=name,
num_items_x=2,
num_items_y=2,
num_items_z=1, # 单层
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="YB_warehouse",
)
```
### 关键要点注释
- `num_items_x/y/z`: 定义仓库在各个方向的位置数量
- `dx/dy/dz`: 第一个位置的起始偏移坐标
- `item_dx/dy/dz`: 相邻位置之间的间距
- `category`: 仓库类别,用于分类管理
- `YB_warehouse_factory`: 统一的仓库创建工厂函数
## 3. 载具Carriers构建
载具是承载瓶子的容器架,定义了瓶子的排列方式和位置。
### 代码示例 (YB_bottle_carriers.py)
```python
from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
from unilabos.resources.bioyond.YB_bottles import YB_pei_ye_xiao_Bottle
def YB_peiyepingxiaoban(name: str) -> BottleCarrier:
"""配液瓶(小)板 - 4x2布局8个位置
Args:
name: 载具名称
Returns:
BottleCarrier: 载具对象包含8个配液瓶位置
"""
# 载具物理尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 65.0
# 瓶位参数
bottle_diameter = 35.0 # 瓶子直径
bottle_spacing_x = 42.0 # X方向瓶子间距
bottle_spacing_y = 35.0 # Y方向瓶子间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (4 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
# 创建瓶位布局4列x2行
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=4, # 4列
num_items_y=2, # 2行
dx=start_x,
dy=start_y,
dz=5.0, # 瓶子底部高度
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
# 为每个瓶位设置名称
for k, v in sites.items():
v.name = f"{name}_{v.name}"
# 创建载具对象
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="YB_peiyepingxiaoban",
)
# 设置载具布局参数
carrier.num_items_x = 4
carrier.num_items_y = 2
carrier.num_items_z = 1
# 定义瓶子排列顺序
ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"]
# 为每个位置创建瓶子实例
for i in range(8):
carrier[i] = YB_pei_ye_xiao_Bottle(f"{name}_bottle_{ordering[i]}")
return carrier
```
### 关键要点注释
- `carrier_size_x/y/z`: 载具的物理尺寸
- `bottle_diameter`: 瓶子的直径,用于计算瓶位大小
- `bottle_spacing_x/y`: 瓶子之间的间距
- `create_ordered_items_2d`: 创建二维排列的瓶位
- `sites`: 瓶位字典,存储所有瓶子位置信息
- `ordering`: 定义瓶位的命名规则如A1, A2, B1等
## 4. 瓶子Bottles构建
瓶子是最终的物料容器,定义了容器的物理属性。
### 代码示例 (YB_bottles.py)
```python
from unilabos.resources.itemized_carrier import Bottle
def YB_pei_ye_xiao_Bottle(
name: str,
diameter: float = 35.0, # 瓶子直径 (mm)
height: float = 60.0, # 瓶子高度 (mm)
max_volume: float = 30000.0, # 最大容量 (μL) - 30mL
barcode: str = None, # 条码
) -> Bottle:
"""创建配液瓶(小)
Args:
name: 瓶子名称
diameter: 瓶子直径
height: 瓶子高度
max_volume: 最大容量(微升)
barcode: 条码标识
Returns:
Bottle: 瓶子对象
"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="YB_pei_ye_xiao_Bottle",
)
def YB_ye_Bottle(
name: str,
diameter: float = 40.0,
height: float = 70.0,
max_volume: float = 50000.0, # 最大容量
barcode: str = None,
) -> Bottle:
"""创建液体瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="YB_ye_Bottle",
)
```
### 关键要点注释
- `diameter`: 瓶子直径,影响瓶位大小计算
- `height`: 瓶子高度,用于碰撞检测和移液计算
- `max_volume`: 最大容量单位为微升μL
- `barcode`: 条码标识,用于瓶子追踪
- `model`: 型号标识,用于区分不同类型的瓶子
## 5. 注册表配置
创建完物料定义后,需要在注册表中注册这些物料,使系统能够识别和使用它们。
`unilabos/registry/resources/bioyond/` 目录下创建:
- `deck.yaml` - 桌子注册表
- `YB_bottle_carriers.yaml` - 载具注册表
- `YB_bottle.yaml` - 瓶子注册表
### 5.1 桌子注册表 (deck.yaml)
```yaml
BIOYOND_YB_Deck:
category:
- deck # 前端显示的分类存放
class:
module: unilabos.resources.bioyond.decks:BIOYOND_YB_Deck # 定义桌子的类的路径
type: pylabrobot
description: BIOYOND_YB_Deck # 描述信息
handles: []
icon: 配液站.webp # 图标文件
init_param_schema: {}
registry_type: resource # 注册类型
version: 1.0.0 # 版本号
```
### 5.2 载具注册表 (YB_bottle_carriers.yaml)
```yaml
YB_peiyepingxiaoban:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_peiyepingxiaoban
type: pylabrobot
description: YB_peiyepingxiaoban
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
```
### 5.3 瓶子注册表 (YB_bottle.yaml)
```yaml
YB_pei_ye_xiao_Bottle:
category:
- yb3
- YB_bottle
class:
module: unilabos.resources.bioyond.YB_bottles:YB_pei_ye_xiao_Bottle
type: pylabrobot
description: YB_pei_ye_xiao_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
```
### 注册表关键要点注释
- `category`: 物料分类,用于在云端(网页界面)中的分类中显示
- `module`: Python模块路径格式为 `模块路径:类名`
- `type`: 框架类型,通常为 `pylabrobot`(默认即可)
- `description`: 描述信息,显示在用户界面中
- `icon`: (名称唯一自动匹配后端上传的图标文件名,显示在云端)
- `registry_type`: 固定为 `resource`
- `version`: 版本号,用于版本管理

View File

@@ -26,6 +26,7 @@ boot_examples/index.md
## 开发者指南
```{toctree}
:maxdepth: 2
developer_guide/device_driver
@@ -34,6 +35,10 @@ developer_guide/add_action
developer_guide/actions
developer_guide/workstation_architecture
developer_guide/add_protocol
developer_guide/add_batteryPLC
developer_guide/materials_tutorial
developer_guide/materials_construction_guide
```
## 接口文档

View File

@@ -1,6 +1,6 @@
package:
name: ros-humble-unilabos-msgs
version: 0.10.7
version: 0.10.10
source:
path: ../../unilabos_msgs
target_directory: src

View File

@@ -0,0 +1,41 @@
:: Generated by vinca http://github.com/RoboStack/vinca.
:: DO NOT EDIT!
setlocal EnableDelayedExpansion
set "PYTHONPATH=%LIBRARY_PREFIX%\lib\site-packages;%SP_DIR%"
:: MSVC is preferred.
set CC=cl.exe
set CXX=cl.exe
rd /s /q build
mkdir build
pushd build
:: set "CMAKE_GENERATOR=Ninja"
:: try to fix long paths issues by using default generator
set "CMAKE_GENERATOR=Visual Studio %VS_MAJOR% %VS_YEAR%"
set "SP_DIR_FORWARDSLASHES=%SP_DIR:\=/%"
set PYTHON="%PREFIX%\python.exe"
cmake ^
-G "%CMAKE_GENERATOR%" ^
-DCMAKE_INSTALL_PREFIX=%LIBRARY_PREFIX% ^
-DCMAKE_BUILD_TYPE=Release ^
-DCMAKE_INSTALL_SYSTEM_RUNTIME_LIBS_SKIP=True ^
-DPYTHON_EXECUTABLE=%PYTHON% ^
-DPython_EXECUTABLE=%PYTHON% ^
-DPython3_EXECUTABLE=%PYTHON% ^
-DSETUPTOOLS_DEB_LAYOUT=OFF ^
-DBUILD_SHARED_LIBS=ON ^
-DBUILD_TESTING=OFF ^
-DCMAKE_OBJECT_PATH_MAX=255 ^
-DPYTHON_INSTALL_DIR=%SP_DIR_FORWARDSLASHES% ^
--compile-no-warning-as-error ^
%SRC_DIR%\%PKG_NAME%\src\work
if errorlevel 1 exit 1
cmake --build . --config Release --target install
if errorlevel 1 exit 1

View File

@@ -0,0 +1,71 @@
# Generated by vinca http://github.com/RoboStack/vinca.
# DO NOT EDIT!
rm -rf build
mkdir build
cd build
# necessary for correctly linking SIP files (from python_qt_bindings)
export LINK=$CXX
if [[ "$CONDA_BUILD_CROSS_COMPILATION" != "1" ]]; then
PYTHON_EXECUTABLE=$PREFIX/bin/python
PKG_CONFIG_EXECUTABLE=$PREFIX/bin/pkg-config
OSX_DEPLOYMENT_TARGET="10.15"
else
PYTHON_EXECUTABLE=$BUILD_PREFIX/bin/python
PKG_CONFIG_EXECUTABLE=$BUILD_PREFIX/bin/pkg-config
OSX_DEPLOYMENT_TARGET="11.0"
fi
echo "USING PYTHON_EXECUTABLE=${PYTHON_EXECUTABLE}"
echo "USING PKG_CONFIG_EXECUTABLE=${PKG_CONFIG_EXECUTABLE}"
export ROS_PYTHON_VERSION=`$PYTHON_EXECUTABLE -c "import sys; print('%i.%i' % (sys.version_info[0:2]))"`
echo "Using Python ${ROS_PYTHON_VERSION}"
# Fix up SP_DIR which for some reason might contain a path to a wrong Python version
FIXED_SP_DIR=$(echo $SP_DIR | sed -E "s/python[0-9]+\.[0-9]+/python$ROS_PYTHON_VERSION/")
echo "Using site-package dir ${FIXED_SP_DIR}"
# see https://github.com/conda-forge/cross-python-feedstock/issues/24
if [[ "$CONDA_BUILD_CROSS_COMPILATION" == "1" ]]; then
find $PREFIX/lib/cmake -type f -exec sed -i "s~\${_IMPORT_PREFIX}/lib/python${ROS_PYTHON_VERSION}/site-packages~${BUILD_PREFIX}/lib/python${ROS_PYTHON_VERSION}/site-packages~g" {} + || true
find $PREFIX/share/rosidl* -type f -exec sed -i "s~$PREFIX/lib/python${ROS_PYTHON_VERSION}/site-packages~${BUILD_PREFIX}/lib/python${ROS_PYTHON_VERSION}/site-packages~g" {} + || true
find $PREFIX/share/rosidl* -type f -exec sed -i "s~\${_IMPORT_PREFIX}/lib/python${ROS_PYTHON_VERSION}/site-packages~${BUILD_PREFIX}/lib/python${ROS_PYTHON_VERSION}/site-packages~g" {} + || true
find $PREFIX/lib/cmake -type f -exec sed -i "s~message(FATAL_ERROR \"The imported target~message(WARNING \"The imported target~g" {} + || true
fi
if [[ $target_platform =~ linux.* ]]; then
export CFLAGS="${CFLAGS} -D__STDC_FORMAT_MACROS=1"
export CXXFLAGS="${CXXFLAGS} -D__STDC_FORMAT_MACROS=1"
fi;
# Needed for qt-gui-cpp ..
if [[ $target_platform =~ linux.* ]]; then
ln -s $GCC ${BUILD_PREFIX}/bin/gcc
ln -s $GXX ${BUILD_PREFIX}/bin/g++
fi;
cmake \
-G "Ninja" \
-DCMAKE_INSTALL_PREFIX=$PREFIX \
-DCMAKE_PREFIX_PATH=$PREFIX \
-DAMENT_PREFIX_PATH=$PREFIX \
-DCMAKE_INSTALL_LIBDIR=lib \
-DCMAKE_BUILD_TYPE=Release \
-DPYTHON_EXECUTABLE=$PYTHON_EXECUTABLE \
-DPython_EXECUTABLE=$PYTHON_EXECUTABLE \
-DPython3_EXECUTABLE=$PYTHON_EXECUTABLE \
-DPython3_FIND_STRATEGY=LOCATION \
-DPKG_CONFIG_EXECUTABLE=$PKG_CONFIG_EXECUTABLE \
-DPYTHON_INSTALL_DIR=$FIXED_SP_DIR \
-DSETUPTOOLS_DEB_LAYOUT=OFF \
-DCATKIN_SKIP_TESTING=$SKIP_TESTING \
-DCMAKE_INSTALL_SYSTEM_RUNTIME_LIBS_SKIP=True \
-DBUILD_SHARED_LIBS=ON \
-DBUILD_TESTING=OFF \
-DCMAKE_OSX_DEPLOYMENT_TARGET=$OSX_DEPLOYMENT_TARGET \
--compile-no-warning-as-error \
$SRC_DIR/$PKG_NAME/src/work
cmake --build . --config Release --target install

View File

@@ -0,0 +1,61 @@
package:
name: ros-humble-unilabos-msgs
version: 0.9.7
source:
path: ../../unilabos_msgs
folder: ros-humble-unilabos-msgs/src/work
build:
script:
sel(win): bld_ament_cmake.bat
sel(unix): build_ament_cmake.sh
number: 5
about:
home: https://www.ros.org/
license: BSD-3-Clause
summary: |
Robot Operating System
extra:
recipe-maintainers:
- ros-forge
requirements:
build:
- "{{ compiler('cxx') }}"
- "{{ compiler('c') }}"
- sel(linux64): sysroot_linux-64 2.17
- ninja
- setuptools
- sel(unix): make
- sel(unix): coreutils
- sel(osx): tapi
- sel(build_platform != target_platform): pkg-config
- cmake
- cython
- sel(win): vs2022_win-64
- sel(build_platform != target_platform): python
- sel(build_platform != target_platform): cross-python_{{ target_platform }}
- sel(build_platform != target_platform): numpy
host:
- numpy
- pip
- sel(build_platform == target_platform): pkg-config
- robostack-staging::ros-humble-action-msgs
- robostack-staging::ros-humble-ament-cmake
- robostack-staging::ros-humble-ament-lint-auto
- robostack-staging::ros-humble-ament-lint-common
- robostack-staging::ros-humble-ros-environment
- robostack-staging::ros-humble-ros-workspace
- robostack-staging::ros-humble-rosidl-default-generators
- robostack-staging::ros-humble-std-msgs
- robostack-staging::ros-humble-geometry-msgs
- robostack-staging::ros2-distro-mutex=0.5.*
run:
- robostack-staging::ros-humble-action-msgs
- robostack-staging::ros-humble-ros-workspace
- robostack-staging::ros-humble-rosidl-default-runtime
- robostack-staging::ros-humble-std-msgs
- robostack-staging::ros-humble-geometry-msgs
# - robostack-staging::ros2-distro-mutex=0.6.*
- sel(osx and x86_64): __osx >={{ MACOSX_DEPLOYMENT_TARGET|default('10.14') }}

View File

@@ -1,6 +1,6 @@
package:
name: unilabos
version: "0.10.7"
version: "0.10.10"
source:
path: ../..

View File

@@ -4,7 +4,7 @@ package_name = 'unilabos'
setup(
name=package_name,
version='0.10.7',
version='0.10.10',
packages=find_packages(),
include_package_data=True,
install_requires=['setuptools'],

View File

@@ -0,0 +1,171 @@
{
"nodes": [
{
"id": "dispensing_station_bioyond",
"name": "dispensing_station_bioyond",
"children": [
"Bioyond_Dispensing_Deck"
],
"parent": null,
"type": "device",
"class": "bioyond_dispensing_station",
"config": {
"config": {
"api_key": "DE9BDDA0",
"api_host": "http://192.168.1.200:44400",
"material_type_mappings": {
"BIOYOND_PolymerStation_1FlaskCarrier": [
"烧杯",
"3a14196b-24f2-ca49-9081-0cab8021bf1a"
],
"BIOYOND_PolymerStation_1BottleCarrier": [
"试剂瓶",
"3a14196b-8bcf-a460-4f74-23f21ca79e72"
],
"BIOYOND_PolymerStation_6StockCarrier": [
"分装板",
"3a14196e-5dfe-6e21-0c79-fe2036d052c4"
],
"BIOYOND_PolymerStation_Liquid_Vial": [
"10%分装小瓶",
"3a14196c-76be-2279-4e22-7310d69aed68"
],
"BIOYOND_PolymerStation_Solid_Vial": [
"90%分装小瓶",
"3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"
],
"BIOYOND_PolymerStation_8StockCarrier": [
"样品板",
"3a14196e-b7a0-a5da-1931-35f3000281e9"
],
"BIOYOND_PolymerStation_Solid_Stock": [
"样品瓶",
"3a14196a-cf7d-8aea-48d8-b9662c7dba94"
]
}
},
"deck": {
"data": {
"_resource_child_name": "Bioyond_Dispensing_Deck",
"_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_PolymerPreparationStation_Deck"
}
},
"protocol_type": []
},
"data": {}
},
{
"id": "Bioyond_Dispensing_Deck",
"name": "Bioyond_Dispensing_Deck",
"sample_id": null,
"children": [],
"parent": "dispensing_station_bioyond",
"type": "deck",
"class": "BIOYOND_PolymerPreparationStation_Deck",
"position": {
"x": 0,
"y": 0,
"z": 0
},
"config": {
"type": "BIOYOND_PolymerPreparationStation_Deck",
"setup": true,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
}
},
"data": {}
},
{
"id": "reaction_station_bioyond",
"name": "reaction_station_bioyond",
"parent": null,
"children": [
"Bioyond_Deck"
],
"type": "device",
"class": "reaction_station.bioyond",
"config": {
"config": {
"api_key": "DE9BDDA0",
"api_host": "http://192.168.1.200:44402",
"workflow_mappings": {
"reactor_taken_out": "3a16081e-4788-ca37-eff4-ceed8d7019d1",
"reactor_taken_in": "3a160df6-76b3-0957-9eb0-cb496d5721c6",
"Solid_feeding_vials": "3a160877-87e7-7699-7bc6-ec72b05eb5e6",
"Liquid_feeding_vials(non-titration)": "3a167d99-6158-c6f0-15b5-eb030f7d8e47",
"Liquid_feeding_solvents": "3a160824-0665-01ed-285a-51ef817a9046",
"Liquid_feeding(titration)": "3a16082a-96ac-0449-446a-4ed39f3365b6",
"liquid_feeding_beaker": "3a16087e-124f-8ddb-8ec1-c2dff09ca784",
"Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a"
},
"material_type_mappings": {
"BIOYOND_PolymerStation_Reactor": [
"反应器",
"3a14233b-902d-0d7b-4533-3f60f1c41c1b"
],
"BIOYOND_PolymerStation_1BottleCarrier": [
"试剂瓶",
"3a14233b-56e3-6c53-a8ab-fcaac163a9ba"
],
"BIOYOND_PolymerStation_1FlaskCarrier": [
"烧杯",
"3a14233b-f0a9-ba84-eaa9-0d4718b361b6"
],
"BIOYOND_PolymerStation_6StockCarrier": [
"样品板",
"3a142339-80de-8f25-6093-1b1b1b6c322e"
],
"BIOYOND_PolymerStation_Solid_Vial": [
"90%分装小瓶",
"3a14233a-26e1-28f8-af6a-60ca06ba0165"
],
"BIOYOND_PolymerStation_Liquid_Vial": [
"10%分装小瓶",
"3a14233a-84a3-088d-6676-7cb4acd57c64"
],
"BIOYOND_PolymerStation_TipBox": [
"枪头盒",
"3a143890-9d51-60ac-6d6f-6edb43c12041"
]
}
},
"deck": {
"data": {
"_resource_child_name": "Bioyond_Deck",
"_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_PolymerReactionStation_Deck"
}
},
"protocol_type": []
},
"data": {}
},
{
"id": "Bioyond_Deck",
"name": "Bioyond_Deck",
"children": [],
"parent": "reaction_station_bioyond",
"type": "deck",
"class": "BIOYOND_PolymerReactionStation_Deck",
"position": {
"x": 0,
"y": 0,
"z": 0
},
"config": {
"type": "BIOYOND_PolymerReactionStation_Deck",
"setup": true,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
}
},
"data": {}
}
]
}

View File

@@ -12,7 +12,37 @@
"config": {
"config": {
"api_key": "DE9BDDA0",
"api_host": "http://192.168.1.200:44388"
"api_host": "http://192.168.1.200:44388",
"material_type_mappings": {
"BIOYOND_PolymerStation_1FlaskCarrier": [
"烧杯",
"3a14196b-24f2-ca49-9081-0cab8021bf1a"
],
"BIOYOND_PolymerStation_1BottleCarrier": [
"试剂瓶",
"3a14196b-8bcf-a460-4f74-23f21ca79e72"
],
"BIOYOND_PolymerStation_6StockCarrier": [
"分装板",
"3a14196e-5dfe-6e21-0c79-fe2036d052c4"
],
"BIOYOND_PolymerStation_Liquid_Vial": [
"10%分装小瓶",
"3a14196c-76be-2279-4e22-7310d69aed68"
],
"BIOYOND_PolymerStation_Solid_Vial": [
"90%分装小瓶",
"3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"
],
"BIOYOND_PolymerStation_8StockCarrier": [
"样品板",
"3a14196e-b7a0-a5da-1931-35f3000281e9"
],
"BIOYOND_PolymerStation_Solid_Stock": [
"样品瓶",
"3a14196a-cf7d-8aea-48d8-b9662c7dba94"
]
}
},
"deck": {
"data": {
@@ -50,4 +80,4 @@
"data": {}
}
]
}
}

View File

@@ -0,0 +1,19 @@
{
"nodes": [
{
"id": "id",
"name": "name",
"children": [
],
"parent": null,
"type": "device",
"class": "opcua_example",
"config": {
"url": "url",
"config_path": "unilabos/device_comms/opcua_client/opcua_workflow_example.json"
},
"data": {
}
}
]
}

View File

@@ -10,24 +10,22 @@
"x": 620.6111111111111,
"y": 171,
"z": 0
},
"config": {
"data": {
"children": [
{
"_resource_child_name": "deck",
"_resource_type": "pylabrobot.resources.opentrons.deck:OTDeck"
}
],
"backend": {
"type": "LiquidHandlerRvizBackend"
}
}
},
},
"data": {},
"children": [
"deck"
]
],
"config": {
"deck": {
"_resource_child_name": "deck",
"_resource_type": "pylabrobot.resources.opentrons.deck:OTDeck"
},
"backend": {
"type": "UniLiquidHandlerRvizBackend"
},
"simulator": true
}
},
{
"id": "deck",
@@ -9650,7 +9648,7 @@
"children": [],
"parent": null,
"type": "device",
"class": "robotic_arm.SCARA_with_slider.virtual",
"class": "robotic_arm.SCARA_with_slider.moveit.virtual",
"position": {
"x": -500,
"y": 1000,

File diff suppressed because it is too large Load Diff

View File

@@ -24,41 +24,33 @@
"Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a"
},
"material_type_mappings": {
"烧杯": [
"BIOYOND_PolymerStation_1FlaskCarrier",
"3a14196b-24f2-ca49-9081-0cab8021bf1a"
"BIOYOND_PolymerStation_Reactor": [
"反应器",
"3a14233b-902d-0d7b-4533-3f60f1c41c1b"
],
"试剂瓶": [
"BIOYOND_PolymerStation_1BottleCarrier",
""
"BIOYOND_PolymerStation_1BottleCarrier": [
"试剂瓶",
"3a14233b-56e3-6c53-a8ab-fcaac163a9ba"
],
"样品板": [
"BIOYOND_PolymerStation_6StockCarrier",
"3a14196e-b7a0-a5da-1931-35f3000281e9"
"BIOYOND_PolymerStation_1FlaskCarrier": [
"烧杯",
"3a14233b-f0a9-ba84-eaa9-0d4718b361b6"
],
"分装板": [
"BIOYOND_PolymerStation_6VialCarrier",
"3a14196e-5dfe-6e21-0c79-fe2036d052c4"
"BIOYOND_PolymerStation_6StockCarrier": [
"样品板",
"3a142339-80de-8f25-6093-1b1b1b6c322e"
],
"样品瓶": [
"BIOYOND_PolymerStation_Solid_Stock",
"3a14196a-cf7d-8aea-48d8-b9662c7dba94"
"BIOYOND_PolymerStation_Solid_Vial": [
"90%分装小瓶",
"3a14233a-26e1-28f8-af6a-60ca06ba0165"
],
"90%分装小瓶": [
"BIOYOND_PolymerStation_Solid_Vial",
"3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"
"BIOYOND_PolymerStation_Liquid_Vial": [
"10%分装小瓶",
"3a14233a-84a3-088d-6676-7cb4acd57c64"
],
"10%分装小瓶": [
"BIOYOND_PolymerStation_Liquid_Vial",
"3a14196c-76be-2279-4e22-7310d69aed68"
],
"枪头盒": [
"BIOYOND_PolymerStation_TipBox",
""
],
"反应器": [
"BIOYOND_PolymerStation_Reactor",
""
"BIOYOND_PolymerStation_TipBox": [
"枪头盒",
"3a143890-9d51-60ac-6d6f-6edb43c12041"
]
}
},
@@ -97,4 +89,4 @@
"data": {}
}
]
}
}

View File

@@ -18,21 +18,21 @@
"config": {
"deck": {
"_resource_child_name": "deck",
"_resource_type": "pylabrobot.resources.opentrons.deck:OTDeck",
"_resource_type": "unilabos.devices.liquid_handling.laiyu.laiyu:TransformXYZDeck",
"name": "deck"
},
"backend": {
"type": "UniLiquidHandlerRvizBackend"
"type": "UniLiquidHandlerLaiyuBackend",
"port": "/dev/ttyUSB_CH340"
},
"simulator": true,
"total_height": 300
"simulator": false,
"total_height": 232.5
}
},
{
"id": "deck",
"name": "deck",
"sample_id": null,
"children": [
"tip_rack",
"plate_well",
@@ -64,7 +64,7 @@
{
"id": "tip_rack",
"name": "tip_rack",
"sample_id": null,
"children": [
"tip_rack_A1"
],
@@ -102,7 +102,7 @@
{
"id": "tip_rack_A1",
"name": "tip_rack_A1",
"sample_id": null,
"children": [],
"parent": "tip_rack",
"type": "container",
@@ -144,7 +144,7 @@
{
"id": "plate_well",
"name": "plate_well",
"sample_id": null,
"children": [
"plate_well_A1"
],
@@ -156,18 +156,6 @@
"y": 116,
"z": 48.5
},
"pose": {
"position_3d": {
"x": 161,
"y": 116,
"z": 48.5
},
"rotation": {
"x": 0,
"y": 0,
"z": 0
}
},
"config": {
"type": "Plate",
"size_x": 127.76,
@@ -195,7 +183,7 @@
{
"id": "plate_well_A1",
"name": "plate_well_A1",
"sample_id": null,
"children": [],
"parent": "plate_well",
"type": "device",
@@ -236,7 +224,7 @@
{
"id": "tube_rack",
"name": "tube_rack",
"sample_id": null,
"children": [
"tube_rack_A1"
],
@@ -271,7 +259,7 @@
{
"id": "tube_rack_A1",
"name": "tube_rack_A1",
"sample_id": null,
"children": [],
"parent": "tube_rack",
"type": "device",
@@ -315,7 +303,7 @@
{
"id": "bottle_rack",
"name": "bottle_rack",
"sample_id": null,
"children": [
"bottle_rack_A1"
],
@@ -351,7 +339,7 @@
{
"id": "bottle_rack_A1",
"name": "bottle_rack_A1",
"sample_id": null,
"children": [],
"parent": "bottle_rack",
"type": "device",

View File

@@ -0,0 +1,383 @@
{
"nodes": [
{
"id": "liquid_handler",
"name": "liquid_handler",
"parent": null,
"type": "device",
"class": "liquid_handler",
"position": {
"x": 0,
"y": 0,
"z": 0
},
"data": {},
"children": [
"deck"
],
"config": {
"deck": {
"_resource_child_name": "deck",
"_resource_type": "unilabos.devices.liquid_handling.laiyu.laiyu:TransformXYZDeck",
"name": "deck"
},
"backend": {
"type": "UniLiquidHandlerRvizBackend"
},
"simulator": true,
"total_height": 300,
"joint_config": "TransformXYZDeck",
"simulate_rviz": true
}
},
{
"id": "deck",
"name": "deck",
"children": [
"tip_rack",
"plate_well",
"tube_rack",
"bottle_rack"
],
"parent": "liquid_handler",
"type": "deck",
"class": "TransformXYZDeck",
"position": {
"x": 0,
"y": 0,
"z": 18
},
"config": {
"type": "TransformXYZDeck",
"size_x": 624.3,
"size_y": 565.2,
"size_z": 900,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
}
},
"data": {}
},
{
"id": "tip_rack",
"name": "tip_rack",
"children": [
"tip_rack_A1"
],
"parent": "deck",
"type": "tip_rack",
"class": "tiprack_box",
"position": {
"x": 150,
"y": 7,
"z": 103
},
"config": {
"type": "TipRack",
"size_x": 134,
"size_y": 96,
"size_z": 7.0,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"category": "tip_rack",
"model": "tiprack_box",
"ordering": [
"A1"
]
},
"data": {}
},
{
"id": "tip_rack_A1",
"name": "tip_rack_A1",
"children": [],
"parent": "tip_rack",
"type": "container",
"class": "",
"position": {
"x": 11.12,
"y": 75,
"z": -91.54
},
"config": {
"type": "TipSpot",
"size_x": 9,
"size_y": 9,
"size_z": 95,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"category": "tip_spot",
"model": null,
"prototype_tip": {
"type": "Tip",
"total_tip_length": 95,
"has_filter": false,
"maximal_volume": 1000.0,
"fitting_depth": 3.29
}
},
"data": {
"tip": null,
"tip_state": null,
"pending_tip": null
}
},
{
"id": "plate_well",
"name": "plate_well",
"children": [
"plate_well_A1"
],
"parent": "deck",
"type": "plate",
"class": "plate_96",
"position": {
"x": 161,
"y": 116,
"z": 48.5
},
"config": {
"type": "Plate",
"size_x": 127.76,
"size_y": 85.48,
"size_z": 45.5,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"category": "plate",
"model": "plate_96",
"ordering": [
"A1"
]
},
"data": {}
},
{
"id": "plate_well_A1",
"name": "plate_well_A1",
"children": [],
"parent": "plate_well",
"type": "device",
"class": "",
"position": {
"x": 10.1,
"y": 70,
"z": 6.1
},
"config": {
"type": "Well",
"size_x": 8.2,
"size_y": 8.2,
"size_z": 38,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"category": "well",
"model": null,
"max_volume": 2000,
"material_z_thickness": null,
"compute_volume_from_height": null,
"compute_height_from_volume": null,
"bottom_type": "unknown",
"cross_section_type": "rectangle"
},
"data": {
"liquids": [["water", 50.0]],
"pending_liquids": [["water", 50.0]],
"liquid_history": []
}
},
{
"id": "tube_rack",
"name": "tube_rack",
"children": [
"tube_rack_A1"
],
"parent": "deck",
"type": "container",
"class": "tube_container",
"position": {
"x": 0,
"y": 127,
"z": 0
},
"config": {
"type": "Plate",
"size_x": 151,
"size_y": 75,
"size_z": 75,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"model": "tube_container",
"ordering": [
"A1"
]
},
"data": {}
},
{
"id": "tube_rack_A1",
"name": "tube_rack_A1",
"children": [],
"parent": "tube_rack",
"type": "device",
"class": "",
"position": {
"x": 6,
"y": 38,
"z": 10
},
"config": {
"type": "Well",
"size_x": 34,
"size_y": 34,
"size_z": 117,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"category": "tube",
"model": null,
"max_volume": 2000,
"material_z_thickness": null,
"compute_volume_from_height": null,
"compute_height_from_volume": null,
"bottom_type": "unknown",
"cross_section_type": "rectangle"
},
"data": {
"liquids": [["water", 50.0]],
"pending_liquids": [["water", 50.0]],
"liquid_history": []
}
}
,
{
"id": "bottle_rack",
"name": "bottle_rack",
"children": [
"bottle_rack_A1"
],
"parent": "deck",
"type": "container",
"class": "bottle_container",
"position": {
"x": 0,
"y": 0,
"z": 0
},
"config": {
"type": "Plate",
"size_x": 130,
"size_y": 117,
"size_z": 8,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"category": "tube_rack",
"model": "bottle_container",
"ordering": [
"A1"
]
},
"data": {}
},
{
"id": "bottle_rack_A1",
"name": "bottle_rack_A1",
"children": [],
"parent": "bottle_rack",
"type": "device",
"class": "",
"position": {
"x": 25,
"y": 18.5,
"z": 8
},
"config": {
"type": "Well",
"size_x": 80,
"size_y": 80,
"size_z": 117,
"rotation": {
"x": 0,
"y": 0,
"z": 0,
"type": "Rotation"
},
"category": "tube",
"model": null,
"max_volume": 2000,
"material_z_thickness": null,
"compute_volume_from_height": null,
"compute_height_from_volume": null,
"bottom_type": "unknown",
"cross_section_type": "rectangle"
},
"data": {
"liquids": [["water", 50.0]],
"pending_liquids": [["water", 50.0]],
"liquid_history": []
}
}
],
"links": []
}

View File

@@ -1 +1 @@
__version__ = "0.10.7"
__version__ = "0.10.10"

View File

@@ -419,7 +419,23 @@ def main():
)
server_thread.start()
asyncio.set_event_loop(asyncio.new_event_loop())
resource_visualization.start()
try:
resource_visualization.start()
except OSError as e:
if "AMENT_PREFIX_PATH" in str(e):
print_status(
f"ROS 2环境未正确设置跳过3D可视化启动。错误详情: {e}",
"warning"
)
print_status(
"建议解决方案:\n"
"1. 激活Conda环境: conda activate unilab\n"
"2. 或使用 --backend simple 参数\n"
"3. 或使用 --visual disable 参数禁用可视化",
"info"
)
else:
raise
while True:
time.sleep(1)
else:

View File

@@ -0,0 +1,19 @@
# OPC UA 通用客户端
本模块提供了一个通用的 OPC UA 客户端实现可以通过外部配置CSV文件来定义节点并通过JSON配置来执行工作流。
## 特点
- 支持通过 CSV 文件配置 OPC UA 节点(只需提供名称、类型和数据类型,支持节点为中文名需指定NodeLanguage
- 自动查找服务器中的节点无需知道确切的节点ID
- 提供工作流机制
- 支持通过 JSON 配置创建工作流
## 使用方法
step1: 准备opcua_nodes.csv文件
step2: 编写opcua_workflow_example.json,以定义工作流。指定opcua_nodes.csv
step3: 编写工作流对应action
step4: 编写opcua_example.yaml注册表
step5: 编写opcua_example.json组态图。指定opcua_workflow_example.json定义工作流文件

View File

@@ -0,0 +1,9 @@
from unilabos.device_comms.opcua_client.node.uniopcua import Variable, Method, Object, NodeType, DataType
__all__ = [
'Variable',
'Method',
'Object',
'NodeType',
'DataType',
]

File diff suppressed because it is too large Load Diff

View File

@@ -0,0 +1,10 @@
from unilabos.device_comms.opcua_client.node.uniopcua import Variable, Method, Object, NodeType, DataType, Base
__all__ = [
'Variable',
'Method',
'Object',
'NodeType',
'DataType',
'Base',
]

View File

@@ -0,0 +1,180 @@
# coding=utf-8
from enum import Enum
from abc import ABC, abstractmethod
from typing import Tuple, Union, Optional, Any, List
from opcua import Client, Node
from opcua.ua import NodeId, NodeClass, VariantType
class DataType(Enum):
BOOLEAN = VariantType.Boolean
SBYTE = VariantType.SByte
BYTE = VariantType.Byte
INT16 = VariantType.Int16
UINT16 = VariantType.UInt16
INT32 = VariantType.Int32
UINT32 = VariantType.UInt32
INT64 = VariantType.Int64
UINT64 = VariantType.UInt64
FLOAT = VariantType.Float
DOUBLE = VariantType.Double
STRING = VariantType.String
DATETIME = VariantType.DateTime
BYTESTRING = VariantType.ByteString
class NodeType(Enum):
VARIABLE = NodeClass.Variable
OBJECT = NodeClass.Object
METHOD = NodeClass.Method
OBJECTTYPE = NodeClass.ObjectType
VARIABLETYPE = NodeClass.VariableType
REFERENCETYPE = NodeClass.ReferenceType
DATATYPE = NodeClass.DataType
VIEW = NodeClass.View
class Base(ABC):
def __init__(self, client: Client, name: str, node_id: str, typ: NodeType, data_type: DataType):
self._node_id: str = node_id
self._client = client
self._name = name
self._type = typ
self._data_type = data_type
self._node: Optional[Node] = None
def _get_node(self) -> Node:
if self._node is None:
try:
# 检查是否是NumericNodeId(ns=X;i=Y)格式
if "NumericNodeId" in self._node_id:
# 从字符串中提取命名空间和标识符
import re
match = re.search(r'ns=(\d+);i=(\d+)', self._node_id)
if match:
ns = int(match.group(1))
identifier = int(match.group(2))
node_id = NodeId(identifier, ns)
self._node = self._client.get_node(node_id)
else:
raise ValueError(f"无法解析节点ID: {self._node_id}")
else:
# 直接使用节点ID字符串
self._node = self._client.get_node(self._node_id)
except Exception as e:
print(f"获取节点失败: {self._node_id}, 错误: {e}")
raise
return self._node
@abstractmethod
def read(self) -> Tuple[Any, bool]:
"""读取节点值,返回(值, 是否出错)"""
pass
@abstractmethod
def write(self, value: Any) -> bool:
"""写入节点值,返回是否出错"""
pass
@property
def type(self) -> NodeType:
return self._type
@property
def node_id(self) -> str:
return self._node_id
@property
def name(self) -> str:
return self._name
class Variable(Base):
def __init__(self, client: Client, name: str, node_id: str, data_type: DataType):
super().__init__(client, name, node_id, NodeType.VARIABLE, data_type)
def read(self) -> Tuple[Any, bool]:
try:
value = self._get_node().get_value()
return value, False
except Exception as e:
print(f"读取变量 {self._name} 失败: {e}")
return None, True
def write(self, value: Any) -> bool:
try:
self._get_node().set_value(value)
return False
except Exception as e:
print(f"写入变量 {self._name} 失败: {e}")
return True
class Method(Base):
def __init__(self, client: Client, name: str, node_id: str, parent_node_id: str, data_type: DataType):
super().__init__(client, name, node_id, NodeType.METHOD, data_type)
self._parent_node_id = parent_node_id
self._parent_node = None
def _get_parent_node(self) -> Node:
if self._parent_node is None:
try:
# 检查是否是NumericNodeId(ns=X;i=Y)格式
if "NumericNodeId" in self._parent_node_id:
# 从字符串中提取命名空间和标识符
import re
match = re.search(r'ns=(\d+);i=(\d+)', self._parent_node_id)
if match:
ns = int(match.group(1))
identifier = int(match.group(2))
node_id = NodeId(identifier, ns)
self._parent_node = self._client.get_node(node_id)
else:
raise ValueError(f"无法解析父节点ID: {self._parent_node_id}")
else:
# 直接使用节点ID字符串
self._parent_node = self._client.get_node(self._parent_node_id)
except Exception as e:
print(f"获取父节点失败: {self._parent_node_id}, 错误: {e}")
raise
return self._parent_node
def read(self) -> Tuple[Any, bool]:
"""方法节点不支持读取操作"""
return None, True
def write(self, value: Any) -> bool:
"""方法节点不支持写入操作"""
return True
def call(self, *args) -> Tuple[Any, bool]:
"""调用方法,返回(返回值, 是否出错)"""
try:
result = self._get_parent_node().call_method(self._get_node(), *args)
return result, False
except Exception as e:
print(f"调用方法 {self._name} 失败: {e}")
return None, True
class Object(Base):
def __init__(self, client: Client, name: str, node_id: str):
super().__init__(client, name, node_id, NodeType.OBJECT, None)
def read(self) -> Tuple[Any, bool]:
"""对象节点不支持直接读取操作"""
return None, True
def write(self, value: Any) -> bool:
"""对象节点不支持直接写入操作"""
return True
def get_children(self) -> Tuple[List[Node], bool]:
"""获取子节点列表,返回(子节点列表, 是否出错)"""
try:
children = self._get_node().get_children()
return children, False
except Exception as e:
print(f"获取对象 {self._name} 的子节点失败: {e}")
return [], True

View File

@@ -0,0 +1,98 @@
{
"register_node_list_from_csv_path": {
"path": "simple_opcua_nodes.csv"
},
"create_flow": [
{
"name": "温度控制流程",
"action": [
{
"name": "温度控制动作",
"node_function_to_create": [
{
"func_name": "read_temperature",
"node_name": "Temperature",
"mode": "read"
},
{
"func_name": "read_heating_status",
"node_name": "HeatingStatus",
"mode": "read"
},
{
"func_name": "set_heating",
"node_name": "HeatingEnabled",
"mode": "write",
"value": true
}
],
"create_init_function": {
"func_name": "init_setpoint",
"node_name": "Setpoint",
"mode": "write",
"value": 25.0
},
"create_start_function": {
"func_name": "start_heating_control",
"node_name": "HeatingEnabled",
"mode": "write",
"write_functions": [
"set_heating"
],
"condition_functions": [
"read_temperature",
"read_heating_status"
],
"stop_condition_expression": "read_temperature >= 25.0 and read_heating_status"
},
"create_stop_function": {
"func_name": "stop_heating",
"node_name": "HeatingEnabled",
"mode": "write",
"value": false
},
"create_cleanup_function": null
}
]
},
{
"name": "报警重置流程",
"action": [
{
"name": "报警重置动作",
"node_function_to_create": [
{
"func_name": "reset_alarm",
"node_name": "ResetAlarm",
"mode": "call",
"value": []
}
],
"create_init_function": null,
"create_start_function": {
"func_name": "start_reset_alarm",
"node_name": "ResetAlarm",
"mode": "call",
"write_functions": [],
"condition_functions": [
"reset_alarm"
],
"stop_condition_expression": "True"
},
"create_stop_function": null,
"create_cleanup_function": null
}
]
},
{
"name": "完整控制流程",
"action": [
"温度控制流程",
"报警重置流程"
]
}
],
"execute_flow": [
"完整控制流程"
]
}

View File

@@ -0,0 +1,2 @@
Name,EnglishName,NodeType,DataType,NodeLanguage
中文名,EnglishName,VARIABLE,INT32,Chinese
1 Name EnglishName NodeType DataType NodeLanguage
2 中文名 EnglishName VARIABLE INT32 Chinese

View File

@@ -0,0 +1,30 @@
{
"register_node_list_from_csv_path": {
"path": "opcua_nodes_example.csv"
},
"create_flow": [
{
"name": "name",
"description": "description",
"parameters": ["parameter1", "parameter2"],
"action": [
{
"init_function": {
"func_name": "init_grab_params",
"write_nodes": ["parameter1", "parameter2"]
},
"start_function": {
"func_name": "start_grab",
"write_nodes": {"parameter_start": true},
"condition_nodes": ["parameter_condition"],
"stop_condition_expression": "parameter_condition == True"
},
"stop_function": {
"func_name": "stop_grab",
"write_nodes": {"parameter_start": false}
}
}
]
}
]
}

View File

@@ -0,0 +1,311 @@
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
OPC UA测试服务器
用于测试OPC UA客户端功能特别是temperature_control和valve_control工作流
"""
import sys
import time
import logging
from opcua import Server, ua
import threading
# 设置日志
logging.basicConfig(level=logging.INFO, format='%(asctime)s - %(levelname)s - %(message)s')
logger = logging.getLogger(__name__)
class OpcUaTestServer:
"""OPC UA测试服务器类"""
def __init__(self, endpoint="opc.tcp://localhost:4840/freeopcua/server/"):
"""
初始化OPC UA服务器
Args:
endpoint: 服务器端点URL
"""
self.server = Server()
self.server.set_endpoint(endpoint)
# 设置服务器名称
self.server.set_server_name("UniLabOS OPC UA Test Server")
# 设置服务器命名空间
self.idx = self.server.register_namespace("http://unilabos.com/opcua/test")
# 获取Objects节点
self.objects = self.server.get_objects_node()
# 创建设备对象
self.device = self.objects.add_object(self.idx, "TestDevice")
# 存储所有节点的字典
self.nodes = {}
# 初始化标志
self.running = False
# 控制标志
self.simulation_active = True
def add_variable(self, name, value, data_type=None):
"""
添加变量节点
Args:
name: 变量名称
value: 初始值
data_type: 数据类型 (可选)
"""
if data_type is None:
var = self.device.add_variable(self.idx, name, value)
else:
var = self.device.add_variable(self.idx, name, value, data_type)
# 设置变量可写
var.set_writable()
# 存储节点
self.nodes[name] = var
logger.info(f"添加变量节点: {name}, 初始值: {value}")
return var
def add_method(self, name, callback, inputs=None, outputs=None):
"""
添加方法节点
Args:
name: 方法名称
callback: 回调函数
inputs: 输入参数列表 [(name, type), ...]
outputs: 输出参数列表 [(name, type), ...]
"""
if inputs is None:
inputs = []
if outputs is None:
outputs = []
# 创建输入参数
input_args = []
for arg_name, arg_type in inputs:
input_args.append(ua.Argument())
input_args[-1].Name = arg_name
input_args[-1].DataType = arg_type
input_args[-1].ValueRank = -1
# 创建输出参数
output_args = []
for arg_name, arg_type in outputs:
output_args.append(ua.Argument())
output_args[-1].Name = arg_name
output_args[-1].DataType = arg_type
output_args[-1].ValueRank = -1
# 添加方法
method = self.device.add_method(
self.idx,
name,
callback,
input_args,
output_args
)
# 存储节点
self.nodes[name] = method
logger.info(f"添加方法节点: {name}")
return method
def start(self):
"""启动服务器"""
if not self.running:
self.server.start()
self.running = True
logger.info("OPC UA服务器已启动")
# 启动模拟线程
self.simulation_thread = threading.Thread(target=self.run_simulation)
self.simulation_thread.daemon = True
self.simulation_thread.start()
def stop(self):
"""停止服务器"""
if self.running:
self.simulation_active = False
if hasattr(self, 'simulation_thread'):
self.simulation_thread.join(timeout=2)
self.server.stop()
self.running = False
logger.info("OPC UA服务器已停止")
def get_node(self, name):
"""获取节点"""
if name in self.nodes:
return self.nodes[name]
return None
def update_variable(self, name, value):
"""更新变量值"""
if name in self.nodes:
self.nodes[name].set_value(value)
logger.debug(f"更新变量 {name} = {value}")
return True
logger.warning(f"变量 {name} 不存在")
return False
def run_simulation(self):
"""运行模拟线程"""
logger.info("启动模拟线程")
temp = 20.0
valve_position = 0.0
flow_rate = 0.0
while self.simulation_active and self.running:
try:
# 温度控制模拟
heating_enabled = self.get_node("HeatingEnabled").get_value()
setpoint = self.get_node("Setpoint").get_value()
if heating_enabled:
self.update_variable("HeatingStatus", True)
if temp < setpoint:
temp += 0.5 # 加快温度上升速度
else:
temp -= 0.1
else:
self.update_variable("HeatingStatus", False)
if temp > 20.0:
temp -= 0.2
# 更新温度
self.update_variable("Temperature", round(temp, 2))
# 阀门控制模拟
valve_control = self.get_node("ValveControl").get_value()
valve_setpoint = self.get_node("ValveSetpoint").get_value()
if valve_control:
if valve_position < valve_setpoint:
valve_position += 5.0 # 加快阀门开启速度
if valve_position > valve_setpoint:
valve_position = valve_setpoint
else:
valve_position -= 1.0
if valve_position < 0:
valve_position = 0
else:
if valve_position > 0:
valve_position -= 5.0
if valve_position < 0:
valve_position = 0
# 更新阀门位置
self.update_variable("ValvePosition", round(valve_position, 2))
# 流量模拟 - 与阀门位置成正比
flow_rate = valve_position * 0.2 # 简单线性关系
self.update_variable("FlowRate", round(flow_rate, 2))
# 更新系统状态
status = []
if heating_enabled:
status.append("Heating")
if valve_control:
status.append("Valve_Open")
if status:
self.update_variable("SystemStatus", "_".join(status))
else:
self.update_variable("SystemStatus", "Idle")
# 每200毫秒更新一次
time.sleep(0.2)
except Exception as e:
logger.error(f"模拟线程错误: {e}")
time.sleep(1) # 出错时稍等一会再继续
logger.info("模拟线程已停止")
def reset_alarm_callback(parent, *args):
"""重置报警的回调函数"""
logger.info("调用了重置报警方法")
return True
def start_process_callback(parent, *args):
"""启动流程的回调函数"""
process_id = args[0] if args else 0
logger.info(f"启动流程 ID: {process_id}")
return process_id
def stop_process_callback(parent, *args):
"""停止流程的回调函数"""
process_id = args[0] if args else 0
logger.info(f"停止流程 ID: {process_id}")
return True
def main():
"""主函数"""
try:
# 创建服务器
server = OpcUaTestServer()
# 添加变量节点 - 温度控制相关
server.add_variable("Temperature", 20.0, ua.VariantType.Float)
server.add_variable("Setpoint", 22.0, ua.VariantType.Float)
server.add_variable("HeatingEnabled", False, ua.VariantType.Boolean)
server.add_variable("HeatingStatus", False, ua.VariantType.Boolean)
# 添加变量节点 - 阀门控制相关
server.add_variable("ValvePosition", 0.0, ua.VariantType.Float)
server.add_variable("ValveSetpoint", 0.0, ua.VariantType.Float)
server.add_variable("ValveControl", False, ua.VariantType.Boolean)
server.add_variable("FlowRate", 0.0, ua.VariantType.Float)
# 其他状态变量
server.add_variable("SystemStatus", "Idle", ua.VariantType.String)
# 添加方法节点
server.add_method(
"ResetAlarm",
reset_alarm_callback,
[],
[("Result", ua.VariantType.Boolean)]
)
server.add_method(
"StartProcess",
start_process_callback,
[("ProcessId", ua.VariantType.Int32)],
[("Result", ua.VariantType.Int32)]
)
server.add_method(
"StopProcess",
stop_process_callback,
[("ProcessId", ua.VariantType.Int32)],
[("Result", ua.VariantType.Boolean)]
)
# 启动服务器
server.start()
logger.info("服务器已启动按Ctrl+C停止")
# 保持服务器运行
try:
while True:
time.sleep(1)
except KeyboardInterrupt:
logger.info("收到键盘中断,正在停止服务器...")
# 停止服务器
server.stop()
except Exception as e:
logger.error(f"服务器错误: {e}")
import traceback
traceback.print_exc()
if __name__ == "__main__":
main()

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dummy2_robot:
kinematics:
# DH parameters for Dummy2 6-DOF robot arm
# [theta, d, a, alpha] for each joint
joint_1: [0.0, 0.1, 0.0, 1.5708] # Base rotation
joint_2: [0.0, 0.0, 0.2, 0.0] # Shoulder
joint_3: [0.0, 0.0, 0.15, 0.0] # Elbow
joint_4: [0.0, 0.1, 0.0, 1.5708] # Wrist roll
joint_5: [0.0, 0.0, 0.0, -1.5708] # Wrist pitch
joint_6: [0.0, 0.06, 0.0, 0.0] # Wrist yaw
# Tool center point offset from last joint
tcp_offset:
x: 0.0
y: 0.0
z: 0.04
# Workspace limits
workspace:
x_min: -0.5
x_max: 0.5
y_min: -0.5
y_max: 0.5
z_min: 0.0
z_max: 0.6

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<?xml version="1.0" encoding="UTF-8"?>
<!--This does not replace URDF, and is not an extension of URDF.
This is a format for representing semantic information about the robot structure.
A URDF file must exist for this robot as well, where the joints and the links that are referenced are defined
-->
<robot name="dummy2">
<!--GROUPS: Representation of a set of joints and links. This can be useful for specifying DOF to plan for, defining arms, end effectors, etc-->
<!--LINKS: When a link is specified, the parent joint of that link (if it exists) is automatically included-->
<!--JOINTS: When a joint is specified, the child link of that joint (which will always exist) is automatically included-->
<!--CHAINS: When a chain is specified, all the links along the chain (including endpoints) are included in the group. Additionally, all the joints that are parents to included links are also included. This means that joints along the chain and the parent joint of the base link are included in the group-->
<!--SUBGROUPS: Groups can also be formed by referencing to already defined group names-->
<group name="dummy2_arm">
<joint name="virtual_joint"/>
<joint name="Joint1"/>
<joint name="Joint2"/>
<joint name="Joint3"/>
<joint name="Joint4"/>
<joint name="Joint5"/>
<joint name="Joint6"/>
</group>
<!--GROUP STATES: Purpose: Define a named state for a particular group, in terms of joint values. This is useful to define states like 'folded arms'-->
<group_state name="home" group="dummy2_arm">
<joint name="Joint1" value="0"/>
<joint name="Joint2" value="0"/>
<joint name="Joint3" value="0"/>
<joint name="Joint4" value="0"/>
<joint name="Joint5" value="0"/>
<joint name="Joint6" value="0"/>
</group_state>
<!--VIRTUAL JOINT: Purpose: this element defines a virtual joint between a robot link and an external frame of reference (considered fixed with respect to the robot)-->
<virtual_joint name="virtual_joint" type="fixed" parent_frame="world" child_link="base_link"/>
<!--DISABLE COLLISIONS: By default it is assumed that any link of the robot could potentially come into collision with any other link in the robot. This tag disables collision checking between a specified pair of links. -->
<disable_collisions link1="J1_1" link2="J2_1" reason="Adjacent"/>
<disable_collisions link1="J1_1" link2="J3_1" reason="Never"/>
<disable_collisions link1="J1_1" link2="J4_1" reason="Never"/>
<disable_collisions link1="J1_1" link2="base_link" reason="Adjacent"/>
<disable_collisions link1="J2_1" link2="J3_1" reason="Adjacent"/>
<disable_collisions link1="J3_1" link2="J4_1" reason="Adjacent"/>
<disable_collisions link1="J3_1" link2="J5_1" reason="Never"/>
<disable_collisions link1="J3_1" link2="J6_1" reason="Never"/>
<disable_collisions link1="J3_1" link2="base_link" reason="Never"/>
<disable_collisions link1="J4_1" link2="J5_1" reason="Adjacent"/>
<disable_collisions link1="J4_1" link2="J6_1" reason="Never"/>
<disable_collisions link1="J5_1" link2="J6_1" reason="Adjacent"/>
</robot>

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<?xml version="1.0" ?>
<robot name="dummy2" xmlns:xacro="http://www.ros.org/wiki/xacro" >
<transmission name="Joint1_tran">
<type>transmission_interface/SimpleTransmission</type>
<joint name="Joint1">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
</joint>
<actuator name="Joint1_actr">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
<mechanicalReduction>1</mechanicalReduction>
</actuator>
</transmission>
<transmission name="Joint2_tran">
<type>transmission_interface/SimpleTransmission</type>
<joint name="Joint2">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
</joint>
<actuator name="Joint2_actr">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
<mechanicalReduction>1</mechanicalReduction>
</actuator>
</transmission>
<transmission name="Joint3_tran">
<type>transmission_interface/SimpleTransmission</type>
<joint name="Joint3">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
</joint>
<actuator name="Joint3_actr">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
<mechanicalReduction>1</mechanicalReduction>
</actuator>
</transmission>
<transmission name="Joint4_tran">
<type>transmission_interface/SimpleTransmission</type>
<joint name="Joint4">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
</joint>
<actuator name="Joint4_actr">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
<mechanicalReduction>1</mechanicalReduction>
</actuator>
</transmission>
<transmission name="Joint5_tran">
<type>transmission_interface/SimpleTransmission</type>
<joint name="Joint5">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
</joint>
<actuator name="Joint5_actr">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
<mechanicalReduction>1</mechanicalReduction>
</actuator>
</transmission>
<transmission name="Joint6_tran">
<type>transmission_interface/SimpleTransmission</type>
<joint name="Joint6">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
</joint>
<actuator name="Joint6_actr">
<hardwareInterface>hardware_interface/EffortJointInterface</hardwareInterface>
<mechanicalReduction>1</mechanicalReduction>
</actuator>
</transmission>
</robot>

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<?xml version="1.0"?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="dummy2">
<xacro:arg name="initial_positions_file" default="initial_positions.yaml" />
<!-- Import dummy2 urdf file -->
<xacro:include filename="$(find dummy2_description)/urdf/dummy2.xacro" />
<!-- Import control_xacro -->
<xacro:include filename="dummy2.ros2_control.xacro" />
<xacro:dummy2_ros2_control name="FakeSystem" initial_positions_file="$(arg initial_positions_file)"/>
</robot>

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###############################################
# Modify all parameters related to servoing here
###############################################
# adapt to dummy2 by Muzhxiaowen, check out the details on bilibili.com
use_gazebo: false # Whether the robot is started in a Gazebo simulation environment
## Properties of incoming commands
command_in_type: "unitless" # "unitless"> in the range [-1:1], as if from joystick. "speed_units"> cmds are in m/s and rad/s
scale:
# Scale parameters are only used if command_in_type=="unitless"
linear: 0.4 # Max linear velocity. Unit is [m/s]. Only used for Cartesian commands.
rotational: 0.8 # Max angular velocity. Unit is [rad/s]. Only used for Cartesian commands.
# Max joint angular/linear velocity. Only used for joint commands on joint_command_in_topic.
joint: 0.5
# Optionally override Servo's internal velocity scaling when near singularity or collision (0.0 = use internal velocity scaling)
# override_velocity_scaling_factor = 0.0 # valid range [0.0:1.0]
## Properties of outgoing commands
publish_period: 0.034 # 1/Nominal publish rate [seconds]
low_latency_mode: false # Set this to true to publish as soon as an incoming Twist command is received (publish_period is ignored)
# What type of topic does your robot driver expect?
# Currently supported are std_msgs/Float64MultiArray or trajectory_msgs/JointTrajectory
command_out_type: trajectory_msgs/JointTrajectory
# What to publish? Can save some bandwidth as most robots only require positions or velocities
publish_joint_positions: true
publish_joint_velocities: true
publish_joint_accelerations: false
## Plugins for smoothing outgoing commands
smoothing_filter_plugin_name: "online_signal_smoothing::ButterworthFilterPlugin"
# If is_primary_planning_scene_monitor is set to true, the Servo server's PlanningScene advertises the /get_planning_scene service,
# which other nodes can use as a source for information about the planning environment.
# NOTE: If a different node in your system is responsible for the "primary" planning scene instance (e.g. the MoveGroup node),
# then is_primary_planning_scene_monitor needs to be set to false.
is_primary_planning_scene_monitor: true
## MoveIt properties
move_group_name: dummy2_arm # Often 'manipulator' or 'arm'
planning_frame: base_link # The MoveIt planning frame. Often 'base_link' or 'world'
## Other frames
ee_frame_name: J6_1 # The name of the end effector link, used to return the EE pose
robot_link_command_frame: base_link # commands must be given in the frame of a robot link. Usually either the base or end effector
## Stopping behaviour
incoming_command_timeout: 0.1 # Stop servoing if X seconds elapse without a new command
# If 0, republish commands forever even if the robot is stationary. Otherwise, specify num. to publish.
# Important because ROS may drop some messages and we need the robot to halt reliably.
num_outgoing_halt_msgs_to_publish: 4
## Configure handling of singularities and joint limits
lower_singularity_threshold: 170.0 # Start decelerating when the condition number hits this (close to singularity)
hard_stop_singularity_threshold: 3000.0 # Stop when the condition number hits this
joint_limit_margin: 0.1 # added as a buffer to joint limits [radians]. If moving quickly, make this larger.
leaving_singularity_threshold_multiplier: 2.0 # Multiply the hard stop limit by this when leaving singularity (see https://github.com/ros-planning/moveit2/pull/620)
## Topic names
cartesian_command_in_topic: ~/delta_twist_cmds # Topic for incoming Cartesian twist commands
joint_command_in_topic: ~/delta_joint_cmds # Topic for incoming joint angle commands
joint_topic: /joint_states
status_topic: ~/status # Publish status to this topic
command_out_topic: /dummy2_arm_controller/joint_trajectory # Publish outgoing commands here
## Collision checking for the entire robot body
check_collisions: true # Check collisions?
collision_check_rate: 10.0 # [Hz] Collision-checking can easily bog down a CPU if done too often.
self_collision_proximity_threshold: 0.001 # Start decelerating when a self-collision is this far [m]
scene_collision_proximity_threshold: 0.002 # Start decelerating when a scene collision is this far [m]

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# Default initial positions for dummy2's ros2_control fake system
initial_positions:
Joint1: 0
Joint2: 0
Joint3: 0
Joint4: 0
Joint5: 0
Joint6: 0

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# joint_limits.yaml allows the dynamics properties specified in the URDF to be overwritten or augmented as needed
# For beginners, we downscale velocity and acceleration limits.
# You can always specify higher scaling factors (<= 1.0) in your motion requests. # Increase the values below to 1.0 to always move at maximum speed.
default_velocity_scaling_factor: 0.1
default_acceleration_scaling_factor: 0.1
# Specific joint properties can be changed with the keys [max_position, min_position, max_velocity, max_acceleration]
# Joint limits can be turned off with [has_velocity_limits, has_acceleration_limits]
joint_limits:
joint_1:
has_velocity_limits: true
max_velocity: 2.0
has_acceleration_limits: false
max_acceleration: 0
joint_2:
has_velocity_limits: true
max_velocity: 2.0
has_acceleration_limits: false
max_acceleration: 0
joint_3:
has_velocity_limits: true
max_velocity: 2.0
has_acceleration_limits: false
max_acceleration: 0
joint_4:
has_velocity_limits: true
max_velocity: 2.0
has_acceleration_limits: false
max_acceleration: 0
joint_5:
has_velocity_limits: true
max_velocity: 2.0
has_acceleration_limits: false
max_acceleration: 0
joint_6:
has_velocity_limits: true
max_velocity: 2.0
has_acceleration_limits: false
max_acceleration: 0

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dummy2_arm:
kinematics_solver: kdl_kinematics_plugin/KDLKinematicsPlugin
kinematics_solver_search_resolution: 0.0050000000000000001
kinematics_solver_timeout: 0.5

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<?xml version="1.0"?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro">
<xacro:macro name="dummy2_robot_ros2_control" params="device_name mesh_path">
<xacro:property name="initial_positions" value="${load_yaml(mesh_path + '/devices/dummy2_robot/config/initial_positions.yaml')['initial_positions']}"/>
<ros2_control name="${device_name}dummy2" type="system">
<hardware>
<!-- By default, set up controllers for simulation. This won't work on real hardware -->
<plugin>mock_components/GenericSystem</plugin>
</hardware>
<!-- <plugin>mock_components/GenericSystem</plugin> -->
<joint name="${device_name}Joint1">
<command_interface name="position"/>
<state_interface name="position">
<param name="initial_value">${initial_positions['Joint1']}</param>
</state_interface>
<state_interface name="velocity"/>
</joint>
<joint name="${device_name}Joint2">
<command_interface name="position"/>
<state_interface name="position">
<param name="initial_value">${initial_positions['Joint2']}</param>
</state_interface>
<state_interface name="velocity"/>
</joint>
<joint name="${device_name}Joint3">
<command_interface name="position"/>
<state_interface name="position">
<param name="initial_value">${initial_positions['Joint3']}</param>
</state_interface>
<state_interface name="velocity"/>
</joint>
<joint name="${device_name}Joint4">
<command_interface name="position"/>
<state_interface name="position">
<param name="initial_value">${initial_positions['Joint4']}</param>
</state_interface>
<state_interface name="velocity"/>
</joint>
<joint name="${device_name}Joint5">
<command_interface name="position"/>
<state_interface name="position">
<param name="initial_value">${initial_positions['Joint5']}</param>
</state_interface>
<state_interface name="velocity"/>
</joint>
<joint name="${device_name}Joint6">
<command_interface name="position"/>
<state_interface name="position">
<param name="initial_value">${initial_positions['Joint6']}</param>
</state_interface>
<state_interface name="velocity"/>
</joint>
</ros2_control>
</xacro:macro>
</robot>

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<?xml version="1.0" encoding="UTF-8"?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro">
<xacro:macro name="dummy2_robot_srdf" params="device_name">
<!--GROUPS: Representation of a set of joints and links. This can be useful for specifying DOF to plan for, defining arms, end effectors, etc-->
<!--LINKS: When a link is specified, the parent joint of that link (if it exists) is automatically included-->
<!--JOINTS: When a joint is specified, the child link of that joint (which will always exist) is automatically included-->
<!--CHAINS: When a chain is specified, all the links along the chain (including endpoints) are included in the group. Additionally, all the joints that are parents to included links are also included. This means that joints along the chain and the parent joint of the base link are included in the group-->
<!--SUBGROUPS: Groups can also be formed by referencing to already defined group names
This is a format for representing semantic information about the robot structure.
A URDF file must exist for this robot as well, where the joints and the links that are referenced are defined
-->
<group name="${device_name}dummy2_arm">
<joint name="${device_name}virtual_joint"/>
<joint name="${device_name}Joint1"/>
<joint name="${device_name}Joint2"/>
<joint name="${device_name}Joint3"/>
<joint name="${device_name}Joint4"/>
<joint name="${device_name}Joint5"/>
<joint name="${device_name}Joint6"/>
</group>
<!--GROUP STATES: Purpose: Define a named state for a particular group, in terms of joint values. This is useful to define states like 'folded arms'-->
<group_state name="home" group="${device_name}dummy2_arm">
<joint name="${device_name}Joint1" value="0"/>
<joint name="${device_name}Joint2" value="0"/>
<joint name="${device_name}Joint3" value="0"/>
<joint name="${device_name}Joint4" value="0"/>
<joint name="${device_name}Joint5" value="0"/>
<joint name="${device_name}Joint6" value="0"/>
</group_state>
<!--VIRTUAL JOINT: Purpose: this element defines a virtual joint between a robot link and an external frame of reference (considered fixed with respect to the robot)-->
<virtual_joint name="${device_name}virtual_joint" type="fixed" parent_frame="world" child_link="${device_name}base_link"/>
<!--DISABLE COLLISIONS: By default it is assumed that any link of the robot could potentially come into collision with any other link in the robot. This tag disables collision checking between a specified pair of links. -->
<disable_collisions link1="${device_name}J1_1" link2="${device_name}J2_1" reason="Adjacent"/>
<disable_collisions link1="${device_name}J1_1" link2="${device_name}J3_1" reason="Never"/>
<disable_collisions link1="${device_name}J1_1" link2="${device_name}J4_1" reason="Never"/>
<disable_collisions link1="${device_name}J1_1" link2="${device_name}base_link" reason="Adjacent"/>
<disable_collisions link1="${device_name}J2_1" link2="${device_name}J3_1" reason="Adjacent"/>
<disable_collisions link1="${device_name}J3_1" link2="${device_name}J4_1" reason="Adjacent"/>
<disable_collisions link1="${device_name}J3_1" link2="${device_name}J5_1" reason="Never"/>
<disable_collisions link1="${device_name}J3_1" link2="${device_name}J6_1" reason="Never"/>
<disable_collisions link1="${device_name}J3_1" link2="${device_name}base_link" reason="Never"/>
<disable_collisions link1="${device_name}J4_1" link2="${device_name}J5_1" reason="Adjacent"/>
<disable_collisions link1="${device_name}J4_1" link2="${device_name}J6_1" reason="Never"/>
<disable_collisions link1="${device_name}J5_1" link2="${device_name}J6_1" reason="Adjacent"/>
</xacro:macro>
</robot>

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<?xml version="1.0" ?>
<robot name="dummy2" xmlns:xacro="http://www.ros.org/wiki/xacro" >
<material name="silver">
<color rgba="0.700 0.700 0.700 1.000"/>
</material>
</robot>

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{
"arm": {
"joint_names": [
"joint_1",
"joint_2",
"joint_3",
"joint_4",
"joint_5",
"joint_6"
],
"base_link_name": "base_link",
"end_effector_name": "J6_1"
}
}

View File

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Panels:
- Class: rviz_common/Displays
Name: Displays
Property Tree Widget:
Expanded:
- /MotionPlanning1
- Class: rviz_common/Help
Name: Help
- Class: rviz_common/Views
Name: Views
Visualization Manager:
Displays:
- Class: rviz_default_plugins/Grid
Name: Grid
Value: true
- Class: moveit_rviz_plugin/MotionPlanning
Name: MotionPlanning
Planned Path:
Loop Animation: true
State Display Time: 0.05 s
Trajectory Topic: display_planned_path
Planning Scene Topic: monitored_planning_scene
Robot Description: robot_description
Scene Geometry:
Scene Alpha: 1
Scene Robot:
Robot Alpha: 0.5
Value: true
Global Options:
Fixed Frame: base_link
Tools:
- Class: rviz_default_plugins/Interact
- Class: rviz_default_plugins/MoveCamera
- Class: rviz_default_plugins/Select
Value: true
Views:
Current:
Class: rviz_default_plugins/Orbit
Distance: 2.0
Focal Point:
X: -0.1
Y: 0.25
Z: 0.30
Name: Current View
Pitch: 0.5
Target Frame: base_link
Yaw: -0.623
Window Geometry:
Height: 975
QMainWindow State: 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
Width: 1200

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# MoveIt uses this configuration for controller management
moveit_controller_manager: moveit_simple_controller_manager/MoveItSimpleControllerManager
moveit_simple_controller_manager:
controller_names:
- dummy2_arm_controller
dummy2_arm_controller:
type: FollowJointTrajectory
action_ns: follow_joint_trajectory
default: true
joints:
- Joint1
- Joint2
- Joint3
- Joint4
- Joint5
- Joint6
action_ns: follow_joint_trajectory
default: true

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dummy2_robot:
# Physical properties for each link
link_masses:
base_link: 5.0
link_1: 3.0
link_2: 2.5
link_3: 2.0
link_4: 1.5
link_5: 1.0
link_6: 0.5
# Center of mass for each link (relative to joint frame)
link_com:
base_link: [0.0, 0.0, 0.05]
link_1: [0.0, 0.0, 0.05]
link_2: [0.1, 0.0, 0.0]
link_3: [0.08, 0.0, 0.0]
link_4: [0.0, 0.0, 0.05]
link_5: [0.0, 0.0, 0.03]
link_6: [0.0, 0.0, 0.02]
# Moment of inertia matrices
link_inertias:
base_link: [0.02, 0.0, 0.0, 0.02, 0.0, 0.02]
link_1: [0.01, 0.0, 0.0, 0.01, 0.0, 0.01]
link_2: [0.008, 0.0, 0.0, 0.008, 0.0, 0.008]
link_3: [0.006, 0.0, 0.0, 0.006, 0.0, 0.006]
link_4: [0.004, 0.0, 0.0, 0.004, 0.0, 0.004]
link_5: [0.002, 0.0, 0.0, 0.002, 0.0, 0.002]
link_6: [0.001, 0.0, 0.0, 0.001, 0.0, 0.001]
# Motor specifications
motor_specs:
joint_1: { max_torque: 150.0, max_speed: 2.0, gear_ratio: 100 }
joint_2: { max_torque: 150.0, max_speed: 2.0, gear_ratio: 100 }
joint_3: { max_torque: 150.0, max_speed: 2.0, gear_ratio: 100 }
joint_4: { max_torque: 50.0, max_speed: 2.0, gear_ratio: 50 }
joint_5: { max_torque: 50.0, max_speed: 2.0, gear_ratio: 50 }
joint_6: { max_torque: 25.0, max_speed: 2.0, gear_ratio: 25 }

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# Limits for the Pilz planner
cartesian_limits:
max_trans_vel: 1.0
max_trans_acc: 2.25
max_trans_dec: -5.0
max_rot_vel: 1.57

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# This config file is used by ros2_control
controller_manager:
ros__parameters:
update_rate: 100 # Hz
dummy2_arm_controller:
type: joint_trajectory_controller/JointTrajectoryController
joint_state_broadcaster:
type: joint_state_broadcaster/JointStateBroadcaster
dummy2_arm_controller:
ros__parameters:
joints:
- Joint1
- Joint2
- Joint3
- Joint4
- Joint5
- Joint6
command_interfaces:
- position
state_interfaces:
- position
- velocity

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dummy2_robot:
# Visual appearance settings
materials:
base_material:
color: [0.8, 0.8, 0.8, 1.0] # Light gray
metallic: 0.1
roughness: 0.3
link_material:
color: [0.2, 0.2, 0.8, 1.0] # Blue
metallic: 0.3
roughness: 0.2
joint_material:
color: [0.6, 0.6, 0.6, 1.0] # Dark gray
metallic: 0.5
roughness: 0.1
camera_material:
color: [0.1, 0.1, 0.1, 1.0] # Black
metallic: 0.0
roughness: 0.8
# Mesh scaling factors
mesh_scale: [0.001, 0.001, 0.001] # Convert mm to m
# Collision geometry simplification
collision_geometries:
base_link: "cylinder" # radius: 0.08, height: 0.1
link_1: "cylinder" # radius: 0.05, height: 0.15
link_2: "box" # size: [0.2, 0.08, 0.08]
link_3: "box" # size: [0.15, 0.06, 0.06]
link_4: "cylinder" # radius: 0.03, height: 0.1
link_5: "cylinder" # radius: 0.025, height: 0.06
link_6: "cylinder" # radius: 0.02, height: 0.04

View File

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<?xml version="1.0" ?>
<robot name="dummy2" xmlns:xacro="http://www.ros.org/wiki/xacro">
<xacro:include filename="$(find dummy2_description)/urdf/materials.xacro" />
<xacro:include filename="$(find dummy2_description)/urdf/dummy2.trans" />
<xacro:include filename="$(find dummy2_description)/urdf/dummy2.gazebo" />
<link name="world" />
<joint name="world_joint" type="fixed">
<parent link="world" />
<child link = "base_link" />
<origin xyz="0.0 0.0 0.0" rpy="0.0 0.0 0.0" />
</joint>
<link name="base_link">
<inertial>
<origin xyz="0.00010022425916431473 -6.186605493937309e-05 0.05493640543484716" rpy="0 0 0"/>
<mass value="1.2152141810431654"/>
<inertia ixx="0.002105" iyy="0.002245" izz="0.002436" ixy="-0.0" iyz="-1.1e-05" ixz="0.0"/>
</inertial>
<visual>
<origin xyz="0 0 0" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/base_link.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="0 0 0" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/base_link.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J1_1">
<inertial>
<origin xyz="-0.00617659688932347 0.007029599744830012 0.012866826083045027" rpy="0 0 0"/>
<mass value="0.1332774369186824"/>
<inertia ixx="6e-05" iyy="5e-05" izz="8.8e-05" ixy="2.1e-05" iyz="-1.4e-05" ixz="8e-06"/>
</inertial>
<visual>
<origin xyz="-0.0001 0.000289 -0.097579" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J1_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.0001 0.000289 -0.097579" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J1_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J2_1">
<inertial>
<origin xyz="0.019335709221765855 0.0019392793940843159 0.07795928103332703" rpy="0 0 0"/>
<mass value="1.9268013917303417"/>
<inertia ixx="0.006165" iyy="0.006538" izz="0.00118" ixy="-3e-06" iyz="4.7e-05" ixz="0.0007"/>
</inertial>
<visual>
<origin xyz="0.011539 -0.034188 -0.12478" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J2_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="0.011539 -0.034188 -0.12478" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J2_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J3_1">
<inertial>
<origin xyz="-0.010672101243726572 -0.02723871972304964 0.04876701375652198" rpy="0 0 0"/>
<mass value="0.30531962155452225"/>
<inertia ixx="0.00029" iyy="0.000238" izz="0.000191" ixy="-1.3e-05" iyz="4.1e-05" ixz="3e-05"/>
</inertial>
<visual>
<origin xyz="-0.023811 -0.034188 -0.28278" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J3_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.023811 -0.034188 -0.28278" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J3_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J4_1">
<inertial>
<origin xyz="-0.005237398377441591 0.06002028183461833 0.0005891767740203724" rpy="0 0 0"/>
<mass value="0.14051172121899885"/>
<inertia ixx="0.000245" iyy="7.9e-05" izz="0.00027" ixy="1.6e-05" iyz="-2e-06" ixz="1e-06"/>
</inertial>
<visual>
<origin xyz="-0.010649 -0.038288 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J4_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.010649 -0.038288 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J4_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J5_1">
<inertial>
<origin xyz="-0.014389813882964664 0.07305218143664277 -0.0009243405950149497" rpy="0 0 0"/>
<mass value="0.7783315754227634"/>
<inertia ixx="0.000879" iyy="0.000339" izz="0.000964" ixy="0.000146" iyz="1e-06" ixz="-5e-06"/>
</inertial>
<visual>
<origin xyz="-0.031949 -0.148289 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J5_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.031949 -0.148289 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J5_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J6_1">
<inertial>
<origin xyz="3.967160300787087e-07 0.0004995066702210837 1.4402781733924286e-07" rpy="0 0 0"/>
<mass value="0.0020561527568204153"/>
<inertia ixx="0.0" iyy="0.0" izz="0.0" ixy="0.0" iyz="0.0" ixz="0.0"/>
</inertial>
<visual>
<origin xyz="-0.012127 -0.267789 -0.344021" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J6_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.012127 -0.267789 -0.344021" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J6_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="camera">
<inertial>
<origin xyz="-0.0006059984983273845 0.0005864706438700462 0.04601775357664567" rpy="0 0 0"/>
<mass value="0.21961029019655884"/>
<inertia ixx="2.9e-05" iyy="0.000206" izz="0.000198" ixy="-0.0" iyz="2e-06" ixz="-0.0"/>
</inertial>
<visual>
<origin xyz="-0.012661 -0.239774 -0.37985" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/camera_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.012661 -0.239774 -0.37985" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/camera_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<joint name="Joint1" type="revolute">
<origin xyz="0.0001 -0.000289 0.097579" rpy="0 0 0"/>
<parent link="base_link"/>
<child link="J1_1"/>
<axis xyz="-0.0 -0.0 1.0"/>
<limit upper="3.054326" lower="-3.054326" effort="100" velocity="100"/>
</joint>
<joint name="Joint2" type="revolute">
<origin xyz="-0.011639 0.034477 0.027201" rpy="0 0 0"/>
<parent link="J1_1"/>
<child link="J2_1"/>
<axis xyz="1.0 0.0 -0.0"/>
<limit upper="1.308997" lower="-2.007129" effort="100" velocity="100"/>
</joint>
<joint name="Joint3" type="revolute">
<origin xyz="0.03535 0.0 0.158" rpy="0 0 0"/>
<parent link="J2_1"/>
<child link="J3_1"/>
<axis xyz="-1.0 0.0 -0.0"/>
<limit upper="1.570796" lower="-1.047198" effort="100" velocity="100"/>
</joint>
<joint name="Joint4" type="revolute">
<origin xyz="-0.013162 0.0041 0.062466" rpy="0 0 0"/>
<parent link="J3_1"/>
<child link="J4_1"/>
<axis xyz="0.0 1.0 -0.0"/>
<limit upper="3.141593" lower="-3.141593" effort="100" velocity="100"/>
</joint>
<joint name="Joint5" type="revolute">
<origin xyz="0.0213 0.110001 0.0" rpy="0 0 0"/>
<parent link="J4_1"/>
<child link="J5_1"/>
<axis xyz="-1.0 -0.0 -0.0"/>
<limit upper="2.094395" lower="-1.919862" effort="100" velocity="100"/>
</joint>
<joint name="Joint6" type="continuous">
<origin xyz="-0.019822 0.1195 -0.001225" rpy="0 0 0"/>
<parent link="J5_1"/>
<child link="J6_1"/>
<axis xyz="0.0 -1.0 0.0"/>
</joint>
<joint name="camera" type="fixed">
<origin xyz="-0.019988 0.091197 0.024883" rpy="0 0 0"/>
<parent link="J5_1"/>
<child link="camera"/>
<axis xyz="1.0 -0.0 0.0"/>
<limit upper="0.0" lower="0.0" effort="100" velocity="100"/>
</joint>
</robot>

View File

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joint_limits:
joint_1:
effort: 150
velocity: 2.0
lower: !degrees -180
upper: !degrees 180
joint_2:
effort: 150
velocity: 2.0
lower: !degrees -90
upper: !degrees 90
joint_3:
effort: 150
velocity: 2.0
lower: !degrees -90
upper: !degrees 90
joint_4:
effort: 50
velocity: 2.0
lower: !degrees -180
upper: !degrees 180
joint_5:
effort: 50
velocity: 2.0
lower: !degrees -90
upper: !degrees 90
joint_6:
effort: 25
velocity: 2.0
lower: !degrees -180
upper: !degrees 180

View File

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<?xml version="1.0" ?>
<robot name="dummy2" xmlns:xacro="http://www.ros.org/wiki/xacro">
<xacro:macro name="dummy2_robot" params="mesh_path:='' parent_link:='' station_name:='' device_name:='' x:=0 y:=0 z:=0 rx:=0 ry:=0 r:=0">
<xacro:include filename="${mesh_path}/devices/dummy2_robot/config/materials.xacro" />
<xacro:include filename="${mesh_path}/devices/dummy2_robot/config/dummy2.trans" />
<joint name="${station_name}${device_name}base_link_joint" type="fixed">
<origin xyz="${x} ${y} ${z}" rpy="${rx} ${ry} ${r}" />
<parent link="${parent_link}"/>
<child link="${station_name}${device_name}device_link"/>
<axis xyz="0 0 0"/>
</joint>
<link name="${station_name}${device_name}device_link"/>
<joint name="${station_name}${device_name}device_link_joint" type="fixed">
<origin xyz="0 0 0" rpy="0 0 0" />
<parent link="${station_name}${device_name}device_link"/>
<child link="${station_name}${device_name}base_link"/>
<axis xyz="0 0 0"/>
</joint>
<link name="${station_name}${device_name}base_link">
<inertial>
<origin xyz="0.00010022425916431473 -6.186605493937309e-05 0.05493640543484716" rpy="0 0 0"/>
<mass value="1.2152141810431654"/>
<inertia ixx="0.002105" iyy="0.002245" izz="0.002436" ixy="-0.0" iyz="-1.1e-05" ixz="0.0"/>
</inertial>
<visual>
<origin xyz="0 0 0" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/base_link.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="0 0 0" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/base_link.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="${station_name}${device_name}J1_1">
<inertial>
<origin xyz="-0.00617659688932347 0.007029599744830012 0.012866826083045027" rpy="0 0 0"/>
<mass value="0.1332774369186824"/>
<inertia ixx="6e-05" iyy="5e-05" izz="8.8e-05" ixy="2.1e-05" iyz="-1.4e-05" ixz="8e-06"/>
</inertial>
<visual>
<origin xyz="-0.0001 0.000289 -0.097579" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J1_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.0001 0.000289 -0.097579" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J1_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="${station_name}${device_name}J2_1">
<inertial>
<origin xyz="0.019335709221765855 0.0019392793940843159 0.07795928103332703" rpy="0 0 0"/>
<mass value="1.9268013917303417"/>
<inertia ixx="0.006165" iyy="0.006538" izz="0.00118" ixy="-3e-06" iyz="4.7e-05" ixz="0.0007"/>
</inertial>
<visual>
<origin xyz="0.011539 -0.034188 -0.12478" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J2_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="0.011539 -0.034188 -0.12478" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J2_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="${station_name}${device_name}J3_1">
<inertial>
<origin xyz="-0.010672101243726572 -0.02723871972304964 0.04876701375652198" rpy="0 0 0"/>
<mass value="0.30531962155452225"/>
<inertia ixx="0.00029" iyy="0.000238" izz="0.000191" ixy="-1.3e-05" iyz="4.1e-05" ixz="3e-05"/>
</inertial>
<visual>
<origin xyz="-0.023811 -0.034188 -0.28278" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J3_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.023811 -0.034188 -0.28278" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J3_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="${station_name}${device_name}J4_1">
<inertial>
<origin xyz="-0.005237398377441591 0.06002028183461833 0.0005891767740203724" rpy="0 0 0"/>
<mass value="0.14051172121899885"/>
<inertia ixx="0.000245" iyy="7.9e-05" izz="0.00027" ixy="1.6e-05" iyz="-2e-06" ixz="1e-06"/>
</inertial>
<visual>
<origin xyz="-0.010649 -0.038288 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J4_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.010649 -0.038288 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J4_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="${station_name}${device_name}J5_1">
<inertial>
<origin xyz="-0.014389813882964664 0.07305218143664277 -0.0009243405950149497" rpy="0 0 0"/>
<mass value="0.7783315754227634"/>
<inertia ixx="0.000879" iyy="0.000339" izz="0.000964" ixy="0.000146" iyz="1e-06" ixz="-5e-06"/>
</inertial>
<visual>
<origin xyz="-0.031949 -0.148289 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J5_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.031949 -0.148289 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J5_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="${station_name}${device_name}J6_1">
<inertial>
<origin xyz="3.967160300787087e-07 0.0004995066702210837 1.4402781733924286e-07" rpy="0 0 0"/>
<mass value="0.0020561527568204153"/>
<inertia ixx="0.0" iyy="0.0" izz="0.0" ixy="0.0" iyz="0.0" ixz="0.0"/>
</inertial>
<visual>
<origin xyz="-0.012127 -0.267789 -0.344021" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J6_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.012127 -0.267789 -0.344021" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/J6_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="${station_name}${device_name}camera">
<inertial>
<origin xyz="-0.0006059984983273845 0.0005864706438700462 0.04601775357664567" rpy="0 0 0"/>
<mass value="0.21961029019655884"/>
<inertia ixx="2.9e-05" iyy="0.000206" izz="0.000198" ixy="-0.0" iyz="2e-06" ixz="-0.0"/>
</inertial>
<visual>
<origin xyz="-0.012661 -0.239774 -0.37985" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/camera_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.012661 -0.239774 -0.37985" rpy="0 0 0"/>
<geometry>
<mesh filename="file://${mesh_path}/devices/dummy2_robot/meshes/camera_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<joint name="${station_name}${device_name}Joint1" type="revolute">
<origin xyz="0.0001 -0.000289 0.097579" rpy="0 0 0"/>
<parent link="${station_name}${device_name}base_link"/>
<child link="${station_name}${device_name}J1_1"/>
<axis xyz="-0.0 -0.0 1.0"/>
<limit upper="3.054326" lower="-3.054326" effort="100" velocity="100"/>
</joint>
<joint name="${station_name}${device_name}Joint2" type="revolute">
<origin xyz="-0.011639 0.034477 0.027201" rpy="0 0 0"/>
<parent link="${station_name}${device_name}J1_1"/>
<child link="${station_name}${device_name}J2_1"/>
<axis xyz="1.0 0.0 -0.0"/>
<limit upper="1.308997" lower="-2.007129" effort="100" velocity="100"/>
</joint>
<joint name="${station_name}${device_name}Joint3" type="revolute">
<origin xyz="0.03535 0.0 0.158" rpy="0 0 0"/>
<parent link="${station_name}${device_name}J2_1"/>
<child link="${station_name}${device_name}J3_1"/>
<axis xyz="-1.0 0.0 -0.0"/>
<limit upper="1.570796" lower="-1.047198" effort="100" velocity="100"/>
</joint>
<joint name="${station_name}${device_name}Joint4" type="revolute">
<origin xyz="-0.013162 0.0041 0.062466" rpy="0 0 0"/>
<parent link="${station_name}${device_name}J3_1"/>
<child link="${station_name}${device_name}J4_1"/>
<axis xyz="0.0 1.0 -0.0"/>
<limit upper="3.141593" lower="-3.141593" effort="100" velocity="100"/>
</joint>
<joint name="${station_name}${device_name}Joint5" type="revolute">
<origin xyz="0.0213 0.110001 0.0" rpy="0 0 0"/>
<parent link="${station_name}${device_name}J4_1"/>
<child link="${station_name}${device_name}J5_1"/>
<axis xyz="-1.0 -0.0 -0.0"/>
<limit upper="2.094395" lower="-1.919862" effort="100" velocity="100"/>
</joint>
<joint name="${station_name}${device_name}Joint6" type="continuous">
<origin xyz="-0.019822 0.1195 -0.001225" rpy="0 0 0"/>
<parent link="${station_name}${device_name}J5_1"/>
<child link="${station_name}${device_name}J6_1"/>
<axis xyz="0.0 -1.0 0.0"/>
</joint>
<joint name="${station_name}${device_name}camera" type="fixed">
<origin xyz="-0.019988 0.091197 0.024883" rpy="0 0 0"/>
<parent link="${station_name}${device_name}J5_1"/>
<child link="${station_name}${device_name}camera"/>
<axis xyz="1.0 -0.0 0.0"/>
<limit upper="0.0" lower="0.0" effort="100" velocity="100"/>
</joint>
</xacro:macro>
</robot>

View File

@@ -0,0 +1,237 @@
<?xml version="1.0" ?>
<robot name="dummy2" xmlns:xacro="http://www.ros.org/wiki/xacro">
<xacro:include filename="$(find dummy2_description)/urdf/materials.xacro" />
<xacro:include filename="$(find dummy2_description)/urdf/dummy2.trans" />
<xacro:include filename="$(find dummy2_description)/urdf/dummy2.gazebo" />
<link name="world" />
<joint name="world_joint" type="fixed">
<parent link="world" />
<child link = "base_link" />
<origin xyz="0.0 0.0 0.0" rpy="0.0 0.0 0.0" />
</joint>
<link name="base_link">
<inertial>
<origin xyz="0.00010022425916431473 -6.186605493937309e-05 0.05493640543484716" rpy="0 0 0"/>
<mass value="1.2152141810431654"/>
<inertia ixx="0.002105" iyy="0.002245" izz="0.002436" ixy="-0.0" iyz="-1.1e-05" ixz="0.0"/>
</inertial>
<visual>
<origin xyz="0 0 0" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/base_link.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="0 0 0" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/base_link.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J1_1">
<inertial>
<origin xyz="-0.00617659688932347 0.007029599744830012 0.012866826083045027" rpy="0 0 0"/>
<mass value="0.1332774369186824"/>
<inertia ixx="6e-05" iyy="5e-05" izz="8.8e-05" ixy="2.1e-05" iyz="-1.4e-05" ixz="8e-06"/>
</inertial>
<visual>
<origin xyz="-0.0001 0.000289 -0.097579" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J1_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.0001 0.000289 -0.097579" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J1_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J2_1">
<inertial>
<origin xyz="0.019335709221765855 0.0019392793940843159 0.07795928103332703" rpy="0 0 0"/>
<mass value="1.9268013917303417"/>
<inertia ixx="0.006165" iyy="0.006538" izz="0.00118" ixy="-3e-06" iyz="4.7e-05" ixz="0.0007"/>
</inertial>
<visual>
<origin xyz="0.011539 -0.034188 -0.12478" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J2_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="0.011539 -0.034188 -0.12478" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J2_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J3_1">
<inertial>
<origin xyz="-0.010672101243726572 -0.02723871972304964 0.04876701375652198" rpy="0 0 0"/>
<mass value="0.30531962155452225"/>
<inertia ixx="0.00029" iyy="0.000238" izz="0.000191" ixy="-1.3e-05" iyz="4.1e-05" ixz="3e-05"/>
</inertial>
<visual>
<origin xyz="-0.023811 -0.034188 -0.28278" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J3_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.023811 -0.034188 -0.28278" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J3_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J4_1">
<inertial>
<origin xyz="-0.005237398377441591 0.06002028183461833 0.0005891767740203724" rpy="0 0 0"/>
<mass value="0.14051172121899885"/>
<inertia ixx="0.000245" iyy="7.9e-05" izz="0.00027" ixy="1.6e-05" iyz="-2e-06" ixz="1e-06"/>
</inertial>
<visual>
<origin xyz="-0.010649 -0.038288 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J4_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.010649 -0.038288 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J4_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J5_1">
<inertial>
<origin xyz="-0.014389813882964664 0.07305218143664277 -0.0009243405950149497" rpy="0 0 0"/>
<mass value="0.7783315754227634"/>
<inertia ixx="0.000879" iyy="0.000339" izz="0.000964" ixy="0.000146" iyz="1e-06" ixz="-5e-06"/>
</inertial>
<visual>
<origin xyz="-0.031949 -0.148289 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J5_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.031949 -0.148289 -0.345246" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J5_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="J6_1">
<inertial>
<origin xyz="3.967160300787087e-07 0.0004995066702210837 1.4402781733924286e-07" rpy="0 0 0"/>
<mass value="0.0020561527568204153"/>
<inertia ixx="0.0" iyy="0.0" izz="0.0" ixy="0.0" iyz="0.0" ixz="0.0"/>
</inertial>
<visual>
<origin xyz="-0.012127 -0.267789 -0.344021" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J6_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.012127 -0.267789 -0.344021" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/J6_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<link name="camera">
<inertial>
<origin xyz="-0.0006059984983273845 0.0005864706438700462 0.04601775357664567" rpy="0 0 0"/>
<mass value="0.21961029019655884"/>
<inertia ixx="2.9e-05" iyy="0.000206" izz="0.000198" ixy="-0.0" iyz="2e-06" ixz="-0.0"/>
</inertial>
<visual>
<origin xyz="-0.012661 -0.239774 -0.37985" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/camera_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
<material name="silver"/>
</visual>
<collision>
<origin xyz="-0.012661 -0.239774 -0.37985" rpy="0 0 0"/>
<geometry>
<mesh filename="file://$(find dummy2_description)/meshes/camera_1.stl" scale="0.001 0.001 0.001"/>
</geometry>
</collision>
</link>
<joint name="Joint1" type="revolute">
<origin xyz="0.0001 -0.000289 0.097579" rpy="0 0 0"/>
<parent link="base_link"/>
<child link="J1_1"/>
<axis xyz="-0.0 -0.0 1.0"/>
<limit upper="3.054326" lower="-3.054326" effort="100" velocity="100"/>
</joint>
<joint name="Joint2" type="revolute">
<origin xyz="-0.011639 0.034477 0.027201" rpy="0 0 0"/>
<parent link="J1_1"/>
<child link="J2_1"/>
<axis xyz="1.0 0.0 -0.0"/>
<limit upper="1.308997" lower="-2.007129" effort="100" velocity="100"/>
</joint>
<joint name="Joint3" type="revolute">
<origin xyz="0.03535 0.0 0.158" rpy="0 0 0"/>
<parent link="J2_1"/>
<child link="J3_1"/>
<axis xyz="-1.0 0.0 -0.0"/>
<limit upper="1.570796" lower="-1.047198" effort="100" velocity="100"/>
</joint>
<joint name="Joint4" type="revolute">
<origin xyz="-0.013162 0.0041 0.062466" rpy="0 0 0"/>
<parent link="J3_1"/>
<child link="J4_1"/>
<axis xyz="0.0 1.0 -0.0"/>
<limit upper="3.141593" lower="-3.141593" effort="100" velocity="100"/>
</joint>
<joint name="Joint5" type="revolute">
<origin xyz="0.0213 0.110001 0.0" rpy="0 0 0"/>
<parent link="J4_1"/>
<child link="J5_1"/>
<axis xyz="-1.0 -0.0 -0.0"/>
<limit upper="2.094395" lower="-1.919862" effort="100" velocity="100"/>
</joint>
<joint name="Joint6" type="continuous">
<origin xyz="-0.019822 0.1195 -0.001225" rpy="0 0 0"/>
<parent link="J5_1"/>
<child link="J6_1"/>
<axis xyz="0.0 -1.0 0.0"/>
</joint>
<joint name="camera" type="fixed">
<origin xyz="-0.019988 0.091197 0.024883" rpy="0 0 0"/>
<parent link="J5_1"/>
<child link="camera"/>
<axis xyz="1.0 -0.0 0.0"/>
<limit upper="0.0" lower="0.0" effort="100" velocity="100"/>
</joint>
</robot>

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@@ -14,6 +14,7 @@ from launch_ros.parameter_descriptions import ParameterFile
from unilabos.registry.registry import lab_registry
from ament_index_python.packages import get_package_share_directory
def get_pattern_matches(folder, pattern):
"""Given all the files in the folder, find those that match the pattern.
@@ -51,7 +52,7 @@ class ResourceVisualization:
self.launch_description = LaunchDescription()
self.resource_dict = resource
self.resource_model = {}
self.resource_type = ['deck', 'plate', 'container']
self.resource_type = ['deck', 'plate', 'container', 'tip_rack']
self.mesh_path = Path(__file__).parent.absolute()
self.enable_rviz = enable_rviz
registry = lab_registry
@@ -128,9 +129,9 @@ class ResourceVisualization:
# if node["parent"] is not None:
# new_dev.set("station_name", node["parent"]+'_')
new_dev.set("x",str(float(node["position"]["x"])/1000))
new_dev.set("y",str(float(node["position"]["y"])/1000))
new_dev.set("z",str(float(node["position"]["z"])/1000))
new_dev.set("x",str(float(node["position"]["position"]["x"])/1000))
new_dev.set("y",str(float(node["position"]["position"]["y"])/1000))
new_dev.set("z",str(float(node["position"]["position"]["z"])/1000))
if "rotation" in node["config"]:
new_dev.set("rx",str(float(node["config"]["rotation"]["x"])))
new_dev.set("ry",str(float(node["config"]["rotation"]["y"])))
@@ -140,7 +141,7 @@ class ResourceVisualization:
new_dev.set(key, str(value))
# 添加ros2_controller
if node['class'].startswith('moveit.'):
if node['class'].find('moveit.')!= -1:
new_include_controller = etree.SubElement(self.root, f"{{{xacro_uri}}}include")
new_include_controller.set("filename", f"{str(self.mesh_path)}/devices/{model_config['mesh']}/config/macro.ros2_control.xacro")
new_controller = etree.SubElement(self.root, f"{{{xacro_uri}}}{model_config['mesh']}_ros2_control")
@@ -203,7 +204,24 @@ class ResourceVisualization:
Returns:
LaunchDescription: launch描述对象
"""
moveit_configs_utils_path = Path(get_package_share_directory("moveit_configs_utils"))
# 检查ROS 2环境变量
if "AMENT_PREFIX_PATH" not in os.environ:
raise OSError(
"ROS 2环境未正确设置。需要设置 AMENT_PREFIX_PATH 环境变量。\n"
"请确保:\n"
"1. 已安装ROS 2 (推荐使用 ros-humble-desktop-full)\n"
"2. 已激活Conda环境: conda activate unilab\n"
"3. 或手动source ROS 2 setup文件: source /opt/ros/humble/setup.bash\n"
"4. 或者使用 --backend simple 参数跳过ROS依赖"
)
try:
moveit_configs_utils_path = Path(get_package_share_directory("moveit_configs_utils"))
except Exception as e:
raise OSError(
f"无法找到moveit_configs_utils包。请确保ROS 2和MoveIt 2已正确安装。\n"
f"原始错误: {e}"
)
default_folder = moveit_configs_utils_path / "default_configs"
planning_pattern = re.compile("^(.*)_planning.yaml$")
pipelines = []
@@ -264,7 +282,8 @@ class ResourceVisualization:
parameters=[
{"robot_description": robot_description},
ros2_controllers,
]
],
env=dict(os.environ)
)
)
for controller in self.moveit_controllers_yaml['moveit_simple_controller_manager']['controller_names']:
@@ -274,6 +293,7 @@ class ResourceVisualization:
executable="spawner",
arguments=[f"{controller}", "--controller-manager", f"controller_manager"],
output="screen",
env=dict(os.environ)
)
)
controllers.append(
@@ -282,6 +302,7 @@ class ResourceVisualization:
executable="spawner",
arguments=["joint_state_broadcaster", "--controller-manager", f"controller_manager"],
output="screen",
env=dict(os.environ)
)
)
for i in controllers:
@@ -300,7 +321,8 @@ class ResourceVisualization:
'use_sim_time': False
},
# kinematics_dict
]
],
env=dict(os.environ)
)
@@ -331,7 +353,8 @@ class ResourceVisualization:
package='moveit_ros_move_group',
executable='move_group',
output='screen',
parameters=moveit_params
parameters=moveit_params,
env=dict(os.environ)
)
@@ -354,7 +377,8 @@ class ResourceVisualization:
robot_description_planning,
planning_pipelines,
]
],
env=dict(os.environ)
)
self.launch_description.add_action(rviz_node)

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@@ -0,0 +1,11 @@
<?xml version="1.0" ?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="bottle">
<link name='bottle'>
<visual name='visual'>
<geometry>
<mesh filename="meshes/bottle.stl"/>
</geometry>
<material name="clay" />
</visual>
</link>
</robot>

View File

@@ -0,0 +1,11 @@
<?xml version="1.0" ?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="bottle_container">
<link name='bottle_container'>
<visual name='visual'>
<geometry>
<mesh filename="meshes/bottle_container.stl"/>
</geometry>
<material name="clay" />
</visual>
</link>
</robot>

View File

@@ -0,0 +1,11 @@
<?xml version="1.0" ?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="plate_96">
<link name='plate_96'>
<visual name='visual'>
<geometry>
<mesh filename="meshes/plate_96.stl"/>
</geometry>
<material name="clay" />
</visual>
</link>
</robot>

Binary file not shown.

View File

@@ -0,0 +1,11 @@
<?xml version="1.0" ?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="tip">
<link name='tip'>
<visual name='visual'>
<geometry>
<mesh filename="meshes/tip.stl"/>
</geometry>
<material name="clay" />
</visual>
</link>
</robot>

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@@ -0,0 +1,11 @@
<?xml version="1.0" ?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="tiprack_box">
<link name='tiprack_box'>
<visual name='visual'>
<geometry>
<mesh filename="meshes/tiprack_box.stl"/>
</geometry>
<material name="clay" />
</visual>
</link>
</robot>

Binary file not shown.

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@@ -0,0 +1,11 @@
<?xml version="1.0" ?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="tube">
<link name='tube'>
<visual name='visual'>
<geometry>
<mesh filename="meshes/tube.stl"/>
</geometry>
<material name="clay" />
</visual>
</link>
</robot>

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@@ -0,0 +1,11 @@
<?xml version="1.0" ?>
<robot xmlns:xacro="http://www.ros.org/wiki/xacro" name="tube_container">
<link name='tube_container'>
<visual name='visual'>
<geometry>
<mesh filename="meshes/tube_container.stl"/>
</geometry>
<material name="clay" />
</visual>
</link>
</robot>

View File

@@ -5,11 +5,13 @@ Panels:
Property Tree Widget:
Expanded:
- /TF1/Tree1
- /PlanningScene1
- /PlanningScene1/Scene Geometry1
- /MotionPlanning1/Scene Geometry1
- /MotionPlanning1/Scene Robot1
- /MotionPlanning1/Planning Request1
Splitter Ratio: 0.5016146302223206
Tree Height: 1112
Tree Height: 563
- Class: rviz_common/Selection
Name: Selection
- Class: rviz_common/Tool Properties
@@ -91,7 +93,7 @@ Visualization Manager:
Planning Scene Topic: /monitored_planning_scene
Robot Description: robot_description
Scene Geometry:
Scene Alpha: 0.8999999761581421
Scene Alpha: 1
Scene Color: 50; 230; 50
Scene Display Time: 0.009999999776482582
Show Scene Geometry: true
@@ -567,25 +569,25 @@ Visualization Manager:
Pitch: 0.4297958016395569
Target Frame: <Fixed Frame>
Value: Orbit (rviz)
Yaw: 0.3525616228580475
Yaw: 0.36756160855293274
Saved: ~
Window Geometry:
Displays:
collapsed: false
Height: 2032
Height: 1088
Hide Left Dock: false
Hide Right Dock: true
MotionPlanning:
collapsed: true
collapsed: false
MotionPlanning - Trajectory Slider:
collapsed: false
QMainWindow State: 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
QMainWindow State: 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
Selection:
collapsed: false
Tool Properties:
collapsed: false
Views:
collapsed: true
Width: 3956
X: 140
Y: 54
Width: 1978
X: 70
Y: 27

View File

@@ -0,0 +1,200 @@
# QOne NMR 用户指南
## 概述
Qone NMR 设备支持多字符串数据处理功能。该设备可以接收包含多个字符串的输入数据,并将每个字符串转换为独立的 TXT 文件,支持灵活的数据格式化和输出。
## 核心功能
- **多字符串处理**: 支持逗号分隔或换行分隔的多个字符串输入
- **自动文件生成**: 每个输入字符串生成一个对应的 TXT 文件
- **文件夹监督**: 自动监督指定目录,检测新内容生成
- **错误处理**: 完善的输入验证和错误处理机制
## 参数说明
### 输入参数
- **string** (str): 包含多个字符串的输入数据,支持格式:
- **逗号分隔**: `"字符串1, 字符串2, 字符串3"`
### 输出参数
- **return_info** (str): 处理结果信息,包含监督功能的执行结果
- **success** (bool): 处理是否成功
- **files_generated** (int): 生成的 TXT 文件数量
## 输入数据格式
### 支持的输入格式
1. **逗号分隔格式**:
```
"A 1 B 1 C 1 D 1 E 1 F 1 G 1 H 1 END, A 2 B 2 C 2 D 2 E 2 F 2 G 2 H 2 END"
```
```
### 数据项格式
每个字符串内的数据项应该用空格分隔,例如:
- `A 1 B 2 C 3 D 4 E 5 F 6 G 7 H 8 END`
- `Sample 001 Method A Volume 10.5 Temp 25.0`
## 输出文件说明
### 文件命名
生成的 TXT 文件将按照row_字符串顺序命名例如
- `row_1.txt`
- `row_2.txt`
### 文件格式
每个 TXT 文件包含对应字符串的格式化数据,格式为:
```
A 1
B 2
C 3
D 4
E 5
F 6
G 7
H 8
END
```
### 输出目录
默认输出目录为 `D:/setup/txt`,可以在 `device.json` 中配置 `output_dir` 参数。
## 文件夹监督功能
### 监督机制
设备在完成字符串到TXT文件的转换后会自动启动文件夹监督功能
- **监督目录**: 默认监督 `D:/Data/MyPC/Automation` 目录
- **检查间隔**: 每60秒检查一次新生成的.nmr文件
- **检测内容**: 新文件生成或现有文件大小变化
- **停止条件**: 连续三次文件大小没有变化,则检测完成
## 文件夹监督功能详细说明
Oxford NMR设备驱动集成了智能文件夹监督功能用于监测.nmr结果文件的生成完成状态。该功能通过监测文件大小变化来判断文件是否已完成写入。
### 工作机制
1. **文件大小监测**: 监督功能专门监测指定目录中新生成的.nmr文件的大小变化
2. **稳定性检测**: 当文件大小在连续多次检查中保持不变时,认为文件已完成写入
3. **批量处理支持**: 根据输入的.txt文件数量自动确定需要监测的.nmr文件数量
4. **实时反馈**: 提供详细的监测进度和文件状态信息
5. **自动停止**: 当所有期望的.nmr文件都达到稳定状态时监督功能自动停止start函数执行完毕
### 配置参数
可以通过`device.json`配置文件调整监督功能的行为:
```json
{
"config": {
"output_dir": "D:/setup/txt",
"monitor_dir": "D:\\Data\\MyPC\\Automation",
"stability_checks": 3,
"check_interval": 60
}
}
```
- `monitor_dir`: 监督的目录路径,默认为`D:\Data\MyPC\Automation`
- `stability_checks`: 文件大小稳定性检查次数默认为3次连续2次检查大小不变则认为文件完成
- `check_interval`: 检查间隔时间默认为60秒
### 监测逻辑
1. **初始状态记录**: 记录监督开始时目录中已存在的.nmr文件及其大小
2. **新文件检测**: 持续检测新生成的.nmr文件
3. **大小变化跟踪**: 为每个新文件维护大小变化历史记录
4. **稳定性判断**: 当文件大小在连续`stability_checks`次检查中保持不变且大小大于0时认为文件完成
5. **完成条件**: 当达到期望数量的.nmr文件都完成时监督功能结束
### 配置监督目录
可以在 `device.json` 中配置 `monitor_dir` 参数来指定监督目录:
```json
{
"config": {
"output_dir": "D:/setup/txt",
"monitor_dir": "D:/Data/MyPC/Automation"
}
}
```
## 使用示例
### 示例 1: 基本多字符串处理
```python
from unilabos.devices.Qone_nmr.Qone_nmr import Qone_nmr
# 创建设备实例
device = Qone_nmr(output_directory="D:/setup/txt")
# 输入多个字符串(逗号分隔)
input_data = "A 1 B 1 C 1 D 1 E 1 F 1 G 1 H 1 END, A 2 B 2 C 2 D 2 E 2 F 2 G 2 H 2 END"
# 处理数据
result = device.start(string=input_data)
print(f"处理结果: {result}")
# 输出: {'return_info': 'Oxford NMR处理完成: 已生成 3 个 txt 文件,保存在: ./output | 监督完成: 成功检测到 3 个.nmr文件已完成生成', 'success': True, 'files_generated': 3}
### 输出示例
当设备成功处理输入并完成文件监督后,会返回如下格式的结果:
```json
{
"return_info": "Oxford NMR处理完成: 已生成 3 个 txt 文件,保存在: D:/setup/txt | 监督完成: 成功检测到 3 个.nmr文件已完成生成start函数执行完毕",
"success": true,
"files_generated": 3
}
```
监督过程中的日志输出示例:
```
[INFO] 开始监督目录: D:/Data/MyPC/Automation检查间隔: 30秒期望.nmr文件数量: 3稳定性检查: 2次
[INFO] 初始状态: 0 个.nmr文件
[INFO] 检测到 3 个新.nmr文件还需要 0 个...
[DEBUG] 文件大小监测中: D:/Data/MyPC/Automation/sample1.nmr (当前: 1024 字节, 检查次数: 1/3)
[DEBUG] 文件大小监测中: D:/Data/MyPC/Automation/sample2.nmr (当前: 2048 字节, 检查次数: 1/3)
[DEBUG] 文件大小监测中: D:/Data/MyPC/Automation/sample3.nmr (当前: 1536 字节, 检查次数: 1/3)
[INFO] 文件大小已稳定: D:/Data/MyPC/Automation/sample1.nmr (大小: 1024 字节)
[INFO] 文件大小已稳定: D:/Data/MyPC/Automation/sample2.nmr (大小: 2048 字节)
[INFO] 文件大小已稳定: D:/Data/MyPC/Automation/sample3.nmr (大小: 1536 字节)
[INFO] 所有期望的.nmr文件都已完成生成! 完成文件数: 3/3
[INFO] 完成的.nmr文件: D:/Data/MyPC/Automation/sample1.nmr (最终大小: 1024 字节)
[INFO] 完成的.nmr文件: D:/Data/MyPC/Automation/sample2.nmr (最终大小: 2048 字节)
[INFO] 完成的.nmr文件: D:/Data/MyPC/Automation/sample3.nmr (最终大小: 1536 字节)
[INFO] 停止文件夹监测,所有文件已完成
```
```
## 错误处理
设备具有完善的错误处理机制:
- **空输入**: 如果输入为空或 None返回错误信息
- **无效格式**: 如果输入格式不正确,返回相应错误
- **文件系统错误**: 如果输出目录不存在或无权限,返回错误信息
## 注意事项
1. **目录权限**: 确保监督目录具有读取权限,以便设备能够检测文件变化
2. **文件大小监测**: 监督功能现在基于文件大小变化来判断.nmr文件是否完成而不是简单的文件存在性检查
3. **稳定性检查**: 文件大小需要在连续多次检查中保持不变才被认为完成默认为3次检查
4. **自动停止**: 监督功能会在检测到期望数量的.nmr文件都达到稳定状态后自动停止避免无限循环
5. **配置灵活性**: 可以通过`device.json`调整稳定性检查次数和检查间隔,以适应不同的使用场景
6. **文件类型**: 监督功能专门针对.nmr文件忽略其他类型的文件变化
7. **批量处理**: 支持同时监测多个.nmr文件的完成状态适合批量处理场景

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@@ -0,0 +1,382 @@
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Oxford NMR Device Driver for Uni-Lab OS
支持Oxford NMR设备的CSV字符串到TXT文件转换功能。
通过ROS2动作接口接收CSV字符串批量生成TXT文件到指定目录。
"""
import csv
import io
import logging
import os
import re
import time
from pathlib import Path
from typing import Dict, Any
class UniversalDriver:
"""Fallback UniversalDriver for standalone testing"""
def __init__(self):
self.success = False
class Qone_nmr(UniversalDriver):
"""Oxford NMR Device Driver
支持CSV字符串到TXT文件的批量转换功能。
"""
def __init__(self, **kwargs):
"""Initialize the Oxford NMR driver
Args:
**kwargs: Device-specific configuration parameters
- config: Configuration dictionary containing output_dir
"""
super().__init__()
# Device configuration
self.config = kwargs
config_dict = kwargs.get('config', {})
# 设置输出目录优先使用配置中的output_dir否则使用默认值
self.output_directory = "D:\\setup\\txt" # 默认输出目录
if config_dict and 'output_dir' in config_dict:
self.output_directory = config_dict['output_dir']
# 设置监督目录优先使用配置中的monitor_dir否则使用默认值
self.monitor_directory = "D:/Data/MyPC/Automation" # 默认监督目录
if config_dict and 'monitor_dir' in config_dict:
self.monitor_directory = config_dict['monitor_dir']
# 设置文件大小稳定性检查参数
self.stability_checks = 3 # 默认稳定性检查次数
if config_dict and 'stability_checks' in config_dict:
self.stability_checks = config_dict['stability_checks']
# 设置检查间隔时间
self.check_interval = 60 # 默认检查间隔(秒)
if config_dict and 'check_interval' in config_dict:
self.check_interval = config_dict['check_interval']
# 确保输出目录存在
os.makedirs(self.output_directory, exist_ok=True)
# ROS节点引用由框架设置
self._ros_node = None
# ROS2 action result properties
self.success = False
self.return_info = ""
# Setup logging
self.logger = logging.getLogger(f"Qone_nmr-{kwargs.get('id', 'unknown')}")
self.logger.info(f"Oxford NMR driver initialized with output directory: {self.output_directory}")
self.logger.info(f"Monitor directory set to: {self.monitor_directory}")
self.logger.info(f"Stability checks: {self.stability_checks}, Check interval: {self.check_interval}s")
def post_init(self, ros_node):
"""ROS节点初始化后的回调方法
Args:
ros_node: ROS节点实例
"""
self._ros_node = ros_node
ros_node.lab_logger().info(f"Oxford NMR设备初始化完成输出目录: {self.output_directory}")
def get_status(self) -> str:
"""获取设备状态
Returns:
str: 设备状态 (Idle|Offline|Error|Busy|Unknown)
"""
return "Idle" # NMR设备始终处于空闲状态等待处理请求
def strings_to_txt(self, string_list, output_dir=None, txt_encoding="utf-8"):
"""
将字符串列表写入多个 txt 文件
string_list: ["A 1 B 1 C 1 D 1 E 1 F 1 G 1 H 1 END", ...]
Args:
string_list: 字符串列表
output_dir: 输出目录如果未指定使用self.output_directory
txt_encoding: 文件编码
Returns:
int: 生成的文件数量
"""
# 使用指定的输出目录或默认目录
target_dir = output_dir if output_dir else self.output_directory
# 确保输出目录存在
os.makedirs(target_dir, exist_ok=True)
self.logger.info(f"开始生成文件到目录: {target_dir}")
for i, s in enumerate(string_list, start=1):
try:
# 去掉开头结尾的引号(如果有)
s = s.strip('"').strip("'")
# 拆分字符串
parts = s.split()
# 按两两一组重新排版为多行
txt_lines = []
for j in range(0, len(parts) - 1, 2):
txt_lines.append("{} {}".format(parts[j], parts[j+1]))
txt_lines.append("END")
txt_content = "\n".join(txt_lines)
# 生成文件名row_1.txt, row_2.txt, ...
file_name = "row_{}.txt".format(i)
out_path = os.path.join(target_dir, file_name)
with open(out_path, "w", encoding=txt_encoding) as f:
f.write(txt_content)
self.logger.info(f"成功生成文件: {file_name}")
except Exception as e:
self.logger.error(f"处理第{i}个字符串时出错: {str(e)}")
raise
return len(string_list) # 返回生成文件数量
def monitor_folder_for_new_content(self, monitor_dir=None, check_interval=60, expected_count=1, stability_checks=3):
"""监督指定文件夹中.nmr文件的大小变化当文件大小稳定时认为文件完成
Args:
monitor_dir (str): 要监督的目录路径如果未指定则使用self.monitor_directory
check_interval (int): 检查间隔时间默认60秒
expected_count (int): 期望生成的.nmr文件数量默认1个
stability_checks (int): 文件大小稳定性检查次数默认3次
Returns:
bool: 如果检测到期望数量的.nmr文件且大小稳定返回True否则返回False
"""
target_dir = monitor_dir if monitor_dir else self.monitor_directory
# 确保监督目录存在
if not os.path.exists(target_dir):
self.logger.warning(f"监督目录不存在: {target_dir}")
return False
self.logger.info(f"开始监督目录: {target_dir},检查间隔: {check_interval}秒,期望.nmr文件数量: {expected_count},稳定性检查: {stability_checks}")
# 记录初始的.nmr文件及其大小
initial_nmr_files = {}
try:
for root, dirs, files in os.walk(target_dir):
for file in files:
if file.lower().endswith('.nmr'):
file_path = os.path.join(root, file)
try:
file_size = os.path.getsize(file_path)
initial_nmr_files[file_path] = file_size
except OSError:
pass # 忽略无法访问的文件
except Exception as e:
self.logger.error(f"读取初始目录状态失败: {str(e)}")
return False
self.logger.info(f"初始状态: {len(initial_nmr_files)} 个.nmr文件")
# 跟踪新文件的大小变化历史
new_files_size_history = {}
completed_files = set()
# 开始监督循环
while True:
time.sleep(check_interval)
current_nmr_files = {}
try:
for root, dirs, files in os.walk(target_dir):
for file in files:
if file.lower().endswith('.nmr'):
file_path = os.path.join(root, file)
try:
file_size = os.path.getsize(file_path)
current_nmr_files[file_path] = file_size
except OSError:
pass
# 找出新生成的.nmr文件
new_nmr_files = set(current_nmr_files.keys()) - set(initial_nmr_files.keys())
if len(new_nmr_files) < expected_count:
self.logger.info(f"检测到 {len(new_nmr_files)} 个新.nmr文件还需要 {expected_count - len(new_nmr_files)} 个...")
continue
# 检查新文件的大小稳定性
for file_path in new_nmr_files:
if file_path in completed_files:
continue
current_size = current_nmr_files.get(file_path, 0)
# 初始化文件大小历史记录
if file_path not in new_files_size_history:
new_files_size_history[file_path] = []
# 记录当前大小
new_files_size_history[file_path].append(current_size)
# 保持历史记录长度不超过稳定性检查次数
if len(new_files_size_history[file_path]) > stability_checks:
new_files_size_history[file_path] = new_files_size_history[file_path][-stability_checks:]
# 检查大小是否稳定
size_history = new_files_size_history[file_path]
if len(size_history) >= stability_checks:
# 检查最近几次的大小是否相同且不为0
if len(set(size_history[-stability_checks:])) == 1 and size_history[-1] > 0:
self.logger.info(f"文件大小已稳定: {file_path} (大小: {current_size} 字节)")
completed_files.add(file_path)
else:
self.logger.debug(f"文件大小仍在变化: {file_path} (当前: {current_size} 字节, 历史: {size_history[-3:]})")
else:
self.logger.debug(f"文件大小监测中: {file_path} (当前: {current_size} 字节, 检查次数: {len(size_history)}/{stability_checks})")
# 检查是否所有期望的文件都已完成
if len(completed_files) >= expected_count:
self.logger.info(f"所有期望的.nmr文件都已完成生成! 完成文件数: {len(completed_files)}/{expected_count}")
for completed_file in list(completed_files)[:expected_count]:
final_size = current_nmr_files.get(completed_file, 0)
self.logger.info(f"完成的.nmr文件: {completed_file} (最终大小: {final_size} 字节)")
self.logger.info("停止文件夹监测,所有文件已完成")
return True
else:
self.logger.info(f"已完成 {len(completed_files)} 个文件,还需要 {expected_count - len(completed_files)} 个文件完成...")
except Exception as e:
self.logger.error(f"监督过程中出错: {str(e)}")
return False
def start(self, string: str = None) -> dict:
"""使用字符串列表启动TXT文件生成支持ROS2动作调用
Args:
string (str): 包含多个字符串的输入数据,支持两种格式:
1. 逗号分隔:如 "A 1 B 2 C 3, X 10 Y 20 Z 30"
2. 换行分隔:如 "A 1 B 2 C 3\nX 10 Y 20 Z 30"
Returns:
dict: ROS2动作结果格式 {"return_info": str, "success": bool, "files_generated": int}
"""
try:
if string is None or string.strip() == "":
error_msg = "未提供字符串参数或参数为空"
self.logger.error(error_msg)
return {"return_info": error_msg, "success": False, "files_generated": 0}
self.logger.info(f"开始处理字符串数据,长度: {len(string)} 字符")
# 支持两种分隔方式:逗号分隔或换行分隔
string_list = []
# 首先尝试逗号分隔
if ',' in string:
string_list = [item.strip() for item in string.split(',') if item.strip()]
else:
# 如果没有逗号,则按换行分隔
string_list = [line.strip() for line in string.strip().split('\n') if line.strip()]
if not string_list:
error_msg = "输入字符串解析后为空"
self.logger.error(error_msg)
return {"return_info": error_msg, "success": False, "files_generated": 0}
# 确保输出目录存在
os.makedirs(self.output_directory, exist_ok=True)
# 使用strings_to_txt函数生成TXT文件
file_count = self.strings_to_txt(
string_list=string_list,
output_dir=self.output_directory,
txt_encoding='utf-8'
)
success_msg = f"Oxford NMR处理完成: 已生成 {file_count} 个 txt 文件,保存在: {self.output_directory}"
self.logger.info(success_msg)
# 在string转txt完成后启动文件夹监督功能
self.logger.info(f"开始启动文件夹监督功能,期望生成 {file_count} 个.nmr文件...")
monitor_result = self.monitor_folder_for_new_content(
expected_count=file_count,
check_interval=self.check_interval,
stability_checks=self.stability_checks
)
if monitor_result:
success_msg += f" | 监督完成: 成功检测到 {file_count} 个.nmr文件已完成生成start函数执行完毕"
else:
success_msg += f" | 监督结束: 监督过程中断或失败start函数执行完毕"
return {"return_info": success_msg, "success": True, "files_generated": file_count}
except Exception as e:
error_msg = f"字符串处理失败: {str(e)}"
self.logger.error(error_msg)
return {"return_info": error_msg, "success": False, "files_generated": 0}
def test_qone_nmr():
"""测试Qone_nmr设备的字符串处理功能"""
try:
# 配置日志输出
logging.basicConfig(
level=logging.INFO,
format='%(asctime)s - %(name)s - %(levelname)s - %(message)s'
)
logger = logging.getLogger("Qone_nmr_test")
logger.info("开始测试Qone_nmr设备...")
# 创建设备实例,使用正确的配置格式
device = Qone_nmr(config={'output_dir': "D:\\setup\\txt"})
logger.info(f"设备初始化完成,输出目录: {device.output_directory}")
# 测试数据:多个字符串,逗号分隔
test_strings = "A 1 B 1 C 1 D 1 E 1 F 1 G 1 H 1 END, A 2 B 2 C 2 D 2 E 2 F 2 G 2 H 2 END"
logger.info(f"测试输入: {test_strings}")
# 确保输出目录存在
if not os.path.exists(device.output_directory):
os.makedirs(device.output_directory, exist_ok=True)
logger.info(f"创建输出目录: {device.output_directory}")
# 调用start方法
result = device.start(string=test_strings)
logger.info(f"处理结果: {result}")
# 显示生成的文件内容
if result.get('success', False):
output_dir = device.output_directory
if os.path.exists(output_dir):
txt_files = [f for f in os.listdir(output_dir) if f.endswith('.txt')]
logger.info(f"生成的文件数量: {len(txt_files)}")
for i, filename in enumerate(txt_files[:2]): # 只显示前2个文件
filepath = os.path.join(output_dir, filename)
logger.info(f"文件 {i+1}: {filename}")
with open(filepath, 'r', encoding='utf-8') as f:
content = f.read()
logger.info(f"内容:\n{content}")
logger.info("测试完成!")
return result
except Exception as e:
logger.error(f"测试过程中出现错误: {str(e)}")
import traceback
traceback.print_exc()
return {"return_info": f"测试失败: {str(e)}", "success": False, "files_generated": 0}
if __name__ == "__main__":
test_qone_nmr()

View File

@@ -0,0 +1,25 @@
{
"nodes": [
{
"id": "Qone_nmr_device",
"name": "Qone_NMR_Device",
"parent": null,
"type": "device",
"class": "Qone_nmr",
"position": {
"x": 620.6111111111111,
"y": 171,
"z": 0
},
"config": {
"output_dir": "D:\\setup\\txt",
"monitor_dir": "D:\\Data\\MyPC\\Automation",
"stability_checks": 3,
"check_interval": 60
},
"data": {},
"children": []
}
],
"links": []
}

View File

@@ -0,0 +1,4 @@
USERNAME,SLOT,EXPNAME,FILE,SOLVENT,TEMPLATE,TITLE
User,SLOT,Name,No.,SOLVENT,Experiment,TITLE
用户名,进样器孔位,实验任务的名字,保存文件的名字,溶剂(按照实验的要求),模板(按照实验的要求,指定测试的元素),标题
admin,18,11LiDFOB,LiDFOB-11B,DMSO,B11,11LiDFOB_400MHz
1 USERNAME SLOT EXPNAME FILE SOLVENT TEMPLATE TITLE
2 User SLOT Name No. SOLVENT Experiment TITLE
3 用户名 进样器孔位 实验任务的名字 保存文件的名字 溶剂(按照实验的要求) 模板(按照实验的要求,指定测试的元素) 标题
4 admin 18 11LiDFOB LiDFOB-11B DMSO B11 11LiDFOB_400MHz

View File

@@ -0,0 +1,61 @@
import serial
import time
ser = serial.Serial(
port="COM18",
baudrate=9600,
bytesize=serial.EIGHTBITS,
parity=serial.PARITY_NONE,
stopbits=serial.STOPBITS_ONE,
timeout=15,
def send_cmd(cmd: str, wait: float = 1.0) -> str:
"""向 Cytomat 发送一行命令并打印/返回响应。"""
print(f">>> {cmd}")
ser.write((cmd + "\r").encode("ascii"))
time.sleep(wait)
resp = ser.read_all().decode("ascii", errors="ignore").strip()
print(f"<<< {resp or '<no response>'}")
return resp
def initialize():
"""设备初始化 (ll:in)。"""
return send_cmd("ll:in")
def wp_to_storage(pos: int):
"""WP → 库位。pos: 19999 绝对地址。"""
return send_cmd(f"mv:ws {pos:04d}")
def storage_to_tfs(stacker: int, level: int):
"""库位 → TFS1。"""
return send_cmd(f"mv:st {stacker:02d} {level:02d}")
def get_basic_state():
"""查询 Basic State Register。"""
return send_cmd("ch:bs")
def set_pitch(stacker: int, pitch_mm: int):
"""设置单个 stacker 的层间距mm"""
return send_cmd(f"se:cs {stacker:02d} {pitch_mm}")
def tfs_to_storage(stacker: int, level: int):
"""TFS1 → 库位。"""
return send_cmd(f"mv:ts {stacker:02d} {level:02d}")
# ---------- 示例工作流 ----------
if __name__ == "__main__":
try:
if not ser.is_open:
ser.open()
initialize()
wp_to_storage(10)
storage_to_tfs(17, 3)
get_basic_state()
tfs_to_storage(7, 5)
except Exception as exc:
print("Error:", exc)
finally:
ser.close()
print("Done.")

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@@ -0,0 +1,138 @@
import os
import time
import json
import logging
from xyz_stepper_driver import ModbusRTUTransport, ModbusClient, XYZStepperController, MotorStatus
# ========== 日志配置 ==========
logging.basicConfig(level=logging.INFO)
logger = logging.getLogger("XYZ_Debug")
def create_controller(port: str = "/dev/ttyUSB1", baudrate: int = 115200) -> XYZStepperController:
"""
初始化通信层与三轴控制器
"""
logger.info(f"🔧 初始化控制器: {port} @ {baudrate}bps")
transport = ModbusRTUTransport(port=port, baudrate=baudrate)
transport.open()
client = ModbusClient(transport)
return XYZStepperController(client=client, port=port, baudrate=baudrate)
def load_existing_soft_zero(ctrl: XYZStepperController, path: str = "work_origin.json") -> bool:
"""
如果已存在软零点文件则加载,否则返回 False
"""
if not os.path.exists(path):
logger.warning("⚠ 未找到已有软零点文件,将等待人工定义新零点。")
return False
try:
with open(path, "r", encoding="utf-8") as f:
data = json.load(f)
origin = data.get("work_origin_steps", {})
ctrl.work_origin_steps = origin
ctrl.is_homed = True
logger.info(f"✔ 已加载软零点文件:{path}")
logger.info(f"当前软零点步数: {origin}")
return True
except Exception as e:
logger.error(f"读取软零点文件失败: {e}")
return False
def test_enable_axis(ctrl: XYZStepperController):
"""
依次使能 X / Y / Z 三轴
"""
logger.info("=== 测试各轴使能 ===")
for axis in ["X", "Y", "Z"]:
try:
result = ctrl.enable(axis, True)
if result:
vals = ctrl.get_status(axis)
st = MotorStatus(vals[3])
logger.info(f"{axis} 轴使能成功,当前状态: {st.name}")
else:
logger.error(f"{axis} 轴使能失败")
except Exception as e:
logger.error(f"{axis} 轴使能异常: {e}")
time.sleep(0.5)
def test_status_read(ctrl: XYZStepperController):
"""
读取各轴当前状态(调试)
"""
logger.info("=== 当前各轴状态 ===")
for axis in ["X", "Y", "Z"]:
try:
vals = ctrl.get_status(axis)
st = MotorStatus(vals[3])
logger.info(
f"{axis}: steps={vals[0]}, speed={vals[1]}, "
f"current={vals[2]}, status={st.name}"
)
except Exception as e:
logger.error(f"获取 {axis} 状态失败: {e}")
time.sleep(0.2)
def redefine_soft_zero(ctrl: XYZStepperController):
"""
手动重新定义软零点
"""
logger.info("=== ⚙️ 重新定义软零点 ===")
ctrl.define_current_as_zero("work_origin.json")
logger.info("✅ 新软零点已写入 work_origin.json")
def test_soft_zero_move(ctrl: XYZStepperController):
"""
以软零点为基准执行三轴运动测试
"""
logger.info("=== 测试软零点相对运动 ===")
ctrl.move_xyz_work(x=100.0, y=100.0, z=40.0, speed=100, acc=800)
for axis in ["X", "Y", "Z"]:
ctrl.wait_complete(axis)
test_status_read(ctrl)
logger.info("✅ 软零点运动测试完成")
def main():
ctrl = create_controller(port="/dev/ttyUSB1", baudrate=115200)
try:
test_enable_axis(ctrl)
test_status_read(ctrl)
# === 初始化或加载软零点 ===
loaded = load_existing_soft_zero(ctrl)
if not loaded:
logger.info("👣 首次运行,定义软零点并保存。")
ctrl.define_current_as_zero("work_origin.json")
# === 软零点回归动作 ===
ctrl.return_to_work_origin()
# === 可选软零点运动测试 ===
# test_soft_zero_move(ctrl)
except KeyboardInterrupt:
logger.info("🛑 手动中断退出")
except Exception as e:
logger.exception(f"❌ 调试出错: {e}")
finally:
if hasattr(ctrl.client, "transport"):
ctrl.client.transport.close()
logger.info("串口已安全关闭 ✅")
if __name__ == "__main__":
main()

View File

@@ -0,0 +1,58 @@
import logging
from xyz_stepper_driver import (
ModbusRTUTransport,
ModbusClient,
XYZStepperController,
MotorAxis,
)
logger = logging.getLogger("XYZStepperCommTest")
logging.basicConfig(level=logging.INFO, format="%(asctime)s [%(levelname)s] %(message)s")
def test_xyz_stepper_comm():
"""仅测试 Modbus 通信是否正常(并输出寄存器数据,不做电机运动)"""
port = "/dev/ttyUSB1"
baudrate = 115200
timeout = 1.2 # 略长避免响应被截断
logger.info(f"尝试连接 Modbus 设备 {port} ...")
transport = ModbusRTUTransport(port, baudrate=baudrate, timeout=timeout)
transport.open()
client = ModbusClient(transport)
ctrl = XYZStepperController(client)
try:
logger.info("✅ 串口已打开,开始读取三个轴状态(打印寄存器内容) ...")
for axis in [MotorAxis.X, MotorAxis.Y, MotorAxis.Z]:
addr = ctrl.axis_addr[axis]
try:
# # 在 get_status 前打印原始寄存器内容
# regs = client.read_registers(addr, ctrl.REG_STATUS, 6)
# hex_regs = [f"0x{val:04X}" for val in regs]
# logger.info(f"[{axis.name}] 原始寄存器 ({len(regs)} 个): {regs} -> {hex_regs}")
# 调用 get_status() 正常解析
status = ctrl.get_status(axis)
logger.info(
f"[{axis.name}] ✅ 通信正常: steps={status.steps}, speed={status.speed}, "
f"current={status.current}, status={status.status.name}"
)
except Exception as e_axis:
logger.error(f"[{axis.name}] ❌ 通信失败: {e_axis}")
except Exception as e:
logger.error(f"❌ 通讯测试失败: {e}")
finally:
transport.close()
logger.info("🔌 串口已关闭")
if __name__ == "__main__":
test_xyz_stepper_comm()

View File

@@ -0,0 +1,8 @@
{
"work_origin_steps": {
"x": 11799,
"y": 11476,
"z": 3312
},
"timestamp": "2025-11-04T15:31:09.802155"
}

View File

@@ -0,0 +1,336 @@
"""
XYZ 三轴步进电机驱动(统一字符串参数版)
基于 Modbus RTU 协议
Author: Xiuyu Chen (Modified by Assistant)
"""
import serial # type: ignore
import struct
import time
import logging
from enum import Enum
from dataclasses import dataclass
from typing import Optional, List, Dict
# ========== 日志配置 ==========
logging.basicConfig(level=logging.INFO)
logger = logging.getLogger("XYZStepper")
# ========== 层 1Modbus RTU ==========
class ModbusException(Exception):
pass
class ModbusRTUTransport:
"""底层串口通信层"""
def __init__(self, port: str, baudrate: int = 115200, timeout: float = 1.2):
self.port = port
self.baudrate = baudrate
self.timeout = timeout
self.ser: Optional[serial.Serial] = None
def open(self):
try:
self.ser = serial.Serial(
port=self.port,
baudrate=self.baudrate,
bytesize=serial.EIGHTBITS,
parity=serial.PARITY_NONE,
stopbits=serial.STOPBITS_ONE,
timeout=0.02,
write_timeout=0.5,
)
logger.info(f"[RTU] 串口连接成功: {self.port}")
except Exception as e:
raise ModbusException(f"无法打开串口 {self.port}: {e}")
def close(self):
if self.ser and self.ser.is_open:
self.ser.close()
logger.info("[RTU] 串口已关闭")
def send(self, frame: bytes):
if not self.ser or not self.ser.is_open:
raise ModbusException("串口未连接")
self.ser.reset_input_buffer()
self.ser.write(frame)
self.ser.flush()
logger.debug(f"[TX] {frame.hex(' ').upper()}")
def receive(self, expected_len: int) -> bytes:
if not self.ser or not self.ser.is_open:
raise ModbusException("串口未连接")
start = time.time()
buf = bytearray()
while len(buf) < expected_len and (time.time() - start) < self.timeout:
chunk = self.ser.read(expected_len - len(buf))
if chunk:
buf.extend(chunk)
else:
time.sleep(0.01)
return bytes(buf)
# ========== 层 2Modbus 协议 ==========
class ModbusFunction(Enum):
READ_HOLDING_REGISTERS = 0x03
WRITE_SINGLE_REGISTER = 0x06
WRITE_MULTIPLE_REGISTERS = 0x10
class ModbusClient:
"""Modbus RTU 客户端"""
def __init__(self, transport: ModbusRTUTransport):
self.transport = transport
@staticmethod
def calc_crc(data: bytes) -> bytes:
crc = 0xFFFF
for b in data:
crc ^= b
for _ in range(8):
crc = (crc >> 1) ^ 0xA001 if crc & 1 else crc >> 1
return struct.pack("<H", crc)
def send_request(self, addr: int, func: int, payload: bytes) -> bytes:
frame = bytes([addr, func]) + payload
full = frame + self.calc_crc(frame)
self.transport.send(full)
time.sleep(0.01)
resp = self.transport.ser.read(256)
if not resp:
raise ModbusException("未收到响应")
start = resp.find(bytes([addr, func]))
if start > 0:
resp = resp[start:]
if len(resp) < 5:
raise ModbusException(f"响应长度不足: {resp.hex(' ').upper()}")
if self.calc_crc(resp[:-2]) != resp[-2:]:
raise ModbusException("CRC 校验失败")
return resp
def read_registers(self, addr: int, start: int, count: int) -> List[int]:
payload = struct.pack(">HH", start, count)
resp = self.send_request(addr, ModbusFunction.READ_HOLDING_REGISTERS.value, payload)
byte_count = resp[2]
regs = [struct.unpack(">H", resp[3 + i:5 + i])[0] for i in range(0, byte_count, 2)]
return regs
def write_single_register(self, addr: int, reg: int, val: int) -> bool:
payload = struct.pack(">HH", reg, val)
resp = self.send_request(addr, ModbusFunction.WRITE_SINGLE_REGISTER.value, payload)
return resp[1] == ModbusFunction.WRITE_SINGLE_REGISTER.value
def write_multiple_registers(self, addr: int, start: int, values: List[int]) -> bool:
byte_count = len(values) * 2
payload = struct.pack(">HHB", start, len(values), byte_count)
payload += b"".join(struct.pack(">H", v & 0xFFFF) for v in values)
resp = self.send_request(addr, ModbusFunction.WRITE_MULTIPLE_REGISTERS.value, payload)
return resp[1] == ModbusFunction.WRITE_MULTIPLE_REGISTERS.value
# ========== 层 3业务逻辑 ==========
class MotorAxis(Enum):
X = 1
Y = 2
Z = 3
class MotorStatus(Enum):
STANDBY = 0
RUNNING = 1
COLLISION_STOP = 2
FORWARD_LIMIT_STOP = 3
REVERSE_LIMIT_STOP = 4
@dataclass
class MotorPosition:
steps: int
speed: int
current: int
status: MotorStatus
class XYZStepperController:
"""XYZ 三轴步进控制器(字符串接口版)"""
STEPS_PER_REV = 16384
LEAD_MM_X, LEAD_MM_Y, LEAD_MM_Z = 80.0, 80.0, 5.0
STEPS_PER_MM_X = STEPS_PER_REV / LEAD_MM_X
STEPS_PER_MM_Y = STEPS_PER_REV / LEAD_MM_Y
STEPS_PER_MM_Z = STEPS_PER_REV / LEAD_MM_Z
REG_STATUS, REG_POS_HIGH, REG_POS_LOW = 0x00, 0x01, 0x02
REG_ACTUAL_SPEED, REG_CURRENT, REG_ENABLE = 0x03, 0x05, 0x06
REG_ZERO_CMD, REG_TARGET_HIGH, REG_TARGET_LOW = 0x0F, 0x10, 0x11
REG_SPEED, REG_ACCEL, REG_PRECISION, REG_START = 0x13, 0x14, 0x15, 0x16
REG_COMMAND = 0x60
def __init__(self, client: Optional[ModbusClient] = None,
port="/dev/ttyUSB0", baudrate=115200,
origin_path="unilabos/devices/laiyu_liquid_test/work_origin.json"):
if client is None:
transport = ModbusRTUTransport(port, baudrate)
transport.open()
self.client = ModbusClient(transport)
else:
self.client = client
self.axis_addr = {MotorAxis.X: 1, MotorAxis.Y: 2, MotorAxis.Z: 3}
self.work_origin_steps = {"x": 0, "y": 0, "z": 0}
self.is_homed = False
self._load_work_origin(origin_path)
# ========== 基础工具 ==========
@staticmethod
def s16(v: int) -> int:
return v - 0x10000 if v & 0x8000 else v
@staticmethod
def s32(h: int, l: int) -> int:
v = (h << 16) | l
return v - 0x100000000 if v & 0x80000000 else v
@classmethod
def mm_to_steps(cls, axis: str, mm: float = 0.0) -> int:
axis = axis.upper()
if axis == "X":
return int(mm * cls.STEPS_PER_MM_X)
elif axis == "Y":
return int(mm * cls.STEPS_PER_MM_Y)
elif axis == "Z":
return int(mm * cls.STEPS_PER_MM_Z)
raise ValueError(f"未知轴: {axis}")
@classmethod
def steps_to_mm(cls, axis: str, steps: int) -> float:
axis = axis.upper()
if axis == "X":
return steps / cls.STEPS_PER_MM_X
elif axis == "Y":
return steps / cls.STEPS_PER_MM_Y
elif axis == "Z":
return steps / cls.STEPS_PER_MM_Z
raise ValueError(f"未知轴: {axis}")
# ========== 状态与控制 ==========
def get_status(self, axis: str = "Z") -> list:
"""返回简化数组格式: [steps, speed, current, status_value]"""
if isinstance(axis, MotorAxis):
axis_enum = axis
elif isinstance(axis, str):
axis_enum = MotorAxis[axis.upper()]
else:
raise TypeError("axis 参数必须为 str 或 MotorAxis")
vals = self.client.read_registers(self.axis_addr[axis_enum], self.REG_STATUS, 6)
return [
self.s32(vals[1], vals[2]),
self.s16(vals[3]),
vals[4],
int(MotorStatus(vals[0]).value)
]
def enable(self, axis: str, state: bool) -> bool:
a = MotorAxis[axis.upper()]
return self.client.write_single_register(self.axis_addr[a], self.REG_ENABLE, 1 if state else 0)
def wait_complete(self, axis: str, timeout=30.0) -> bool:
a = axis.upper()
start = time.time()
while time.time() - start < timeout:
vals = self.get_status(a)
st = MotorStatus(vals[3]) # 第4个元素是状态值
if st == MotorStatus.STANDBY:
return True
if st in (MotorStatus.COLLISION_STOP, MotorStatus.FORWARD_LIMIT_STOP, MotorStatus.REVERSE_LIMIT_STOP):
logger.warning(f"{a} 轴异常停止: {st.name}")
return False
time.sleep(0.1)
logger.warning(f"{a} 轴运动超时")
return False
# ========== 控制命令 ==========
def move_to(self, axis: str, steps: int, speed: int = 2000, acc: int = 500, precision: int = 50) -> bool:
a = MotorAxis[axis.upper()]
addr = self.axis_addr[a]
hi, lo = (steps >> 16) & 0xFFFF, steps & 0xFFFF
values = [hi, lo, speed, acc, precision]
ok = self.client.write_multiple_registers(addr, self.REG_TARGET_HIGH, values)
if ok:
self.client.write_single_register(addr, self.REG_START, 1)
return ok
def move_xyz_work(self, x: float = 0.0, y: float = 0.0, z: float = 0.0, speed: int = 100, acc: int = 1500):
logger.info("🧭 执行安全多轴运动Z→XY→Z")
if z is not None:
safe_z = self._to_machine_steps("Z", 0.0)
self.move_to("Z", safe_z, speed, acc)
self.wait_complete("Z")
if x is not None or y is not None:
if x is not None:
self.move_to("X", self._to_machine_steps("X", x), speed, acc)
if y is not None:
self.move_to("Y", self._to_machine_steps("Y", y), speed, acc)
if x is not None:
self.wait_complete("X")
if y is not None:
self.wait_complete("Y")
if z is not None:
self.move_to("Z", self._to_machine_steps("Z", z), speed, acc)
self.wait_complete("Z")
logger.info("✅ 多轴顺序运动完成")
# ========== 坐标与零点 ==========
def _to_machine_steps(self, axis: str, mm: float) -> int:
base = self.work_origin_steps.get(axis.lower(), 0)
return base + self.mm_to_steps(axis, mm)
def define_current_as_zero(self, save_path="work_origin.json"):
import json
from datetime import datetime
origin = {}
for axis in ["X", "Y", "Z"]:
vals = self.get_status(axis)
origin[axis.lower()] = int(vals[0]) # 第1个是步数
with open(save_path, "w", encoding="utf-8") as f:
json.dump({"work_origin_steps": origin, "timestamp": datetime.now().isoformat()}, f, indent=2)
self.work_origin_steps = origin
self.is_homed = True
logger.info(f"✅ 零点已定义并保存至 {save_path}")
def _load_work_origin(self, path: str) -> bool:
import json, os
if not os.path.exists(path):
logger.warning("⚠️ 未找到软零点文件")
return False
with open(path, "r", encoding="utf-8") as f:
data = json.load(f)
self.work_origin_steps = data.get("work_origin_steps", {"x": 0, "y": 0, "z": 0})
self.is_homed = True
logger.info(f"📂 软零点已加载: {self.work_origin_steps}")
return True
def return_to_work_origin(self, speed: int = 200, acc: int = 800):
logger.info("🏁 回工件软零点")
self.move_to("Z", self._to_machine_steps("Z", 0.0), speed, acc)
self.wait_complete("Z")
self.move_to("X", self.work_origin_steps.get("x", 0), speed, acc)
self.move_to("Y", self.work_origin_steps.get("y", 0), speed, acc)
self.wait_complete("X")
self.wait_complete("Y")
self.move_to("Z", self.work_origin_steps.get("z", 0), speed, acc)
self.wait_complete("Z")
logger.info("🎯 回软零点完成 ✅")

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"""
LaiYu液体处理设备后端模块
提供设备后端接口和实现
"""
from .laiyu_backend import LaiYuLiquidBackend, create_laiyu_backend
__all__ = ['LaiYuLiquidBackend', 'create_laiyu_backend']

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"""
LaiYu液体处理设备后端实现
提供设备的后端接口和控制逻辑
"""
import logging
from typing import Dict, Any, Optional, List
from abc import ABC, abstractmethod
# 尝试导入PyLabRobot后端
try:
from pylabrobot.liquid_handling.backends import LiquidHandlerBackend
PYLABROBOT_AVAILABLE = True
except ImportError:
PYLABROBOT_AVAILABLE = False
# 创建模拟后端基类
class LiquidHandlerBackend:
def __init__(self, name: str):
self.name = name
self.is_connected = False
def connect(self):
"""连接设备"""
pass
def disconnect(self):
"""断开连接"""
pass
class LaiYuLiquidBackend(LiquidHandlerBackend):
"""LaiYu液体处理设备后端"""
def __init__(self, name: str = "LaiYu_Liquid_Backend"):
"""
初始化LaiYu液体处理设备后端
Args:
name: 后端名称
"""
if PYLABROBOT_AVAILABLE:
# PyLabRobot 的 LiquidHandlerBackend 不接受参数
super().__init__()
else:
# 模拟版本接受 name 参数
super().__init__(name)
self.name = name
self.logger = logging.getLogger(__name__)
self.is_connected = False
self.device_info = {
"name": "LaiYu液体处理设备",
"version": "1.0.0",
"manufacturer": "LaiYu",
"model": "LaiYu_Liquid_Handler"
}
def connect(self) -> bool:
"""
连接到LaiYu液体处理设备
Returns:
bool: 连接是否成功
"""
try:
self.logger.info("正在连接到LaiYu液体处理设备...")
# 这里应该实现实际的设备连接逻辑
# 目前返回模拟连接成功
self.is_connected = True
self.logger.info("成功连接到LaiYu液体处理设备")
return True
except Exception as e:
self.logger.error(f"连接LaiYu液体处理设备失败: {e}")
self.is_connected = False
return False
def disconnect(self) -> bool:
"""
断开与LaiYu液体处理设备的连接
Returns:
bool: 断开连接是否成功
"""
try:
self.logger.info("正在断开与LaiYu液体处理设备的连接...")
# 这里应该实现实际的设备断开连接逻辑
self.is_connected = False
self.logger.info("成功断开与LaiYu液体处理设备的连接")
return True
except Exception as e:
self.logger.error(f"断开LaiYu液体处理设备连接失败: {e}")
return False
def is_device_connected(self) -> bool:
"""
检查设备是否已连接
Returns:
bool: 设备是否已连接
"""
return self.is_connected
def get_device_info(self) -> Dict[str, Any]:
"""
获取设备信息
Returns:
Dict[str, Any]: 设备信息字典
"""
return self.device_info.copy()
def home_device(self) -> bool:
"""
设备归零操作
Returns:
bool: 归零是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行归零操作")
return False
try:
self.logger.info("正在执行设备归零操作...")
# 这里应该实现实际的设备归零逻辑
self.logger.info("设备归零操作完成")
return True
except Exception as e:
self.logger.error(f"设备归零操作失败: {e}")
return False
def aspirate(self, volume: float, location: Dict[str, Any]) -> bool:
"""
吸液操作
Args:
volume: 吸液体积 (微升)
location: 吸液位置信息
Returns:
bool: 吸液是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行吸液操作")
return False
try:
self.logger.info(f"正在执行吸液操作: 体积={volume}μL, 位置={location}")
# 这里应该实现实际的吸液逻辑
self.logger.info("吸液操作完成")
return True
except Exception as e:
self.logger.error(f"吸液操作失败: {e}")
return False
def dispense(self, volume: float, location: Dict[str, Any]) -> bool:
"""
排液操作
Args:
volume: 排液体积 (微升)
location: 排液位置信息
Returns:
bool: 排液是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行排液操作")
return False
try:
self.logger.info(f"正在执行排液操作: 体积={volume}μL, 位置={location}")
# 这里应该实现实际的排液逻辑
self.logger.info("排液操作完成")
return True
except Exception as e:
self.logger.error(f"排液操作失败: {e}")
return False
def pick_up_tip(self, location: Dict[str, Any]) -> bool:
"""
取枪头操作
Args:
location: 枪头位置信息
Returns:
bool: 取枪头是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行取枪头操作")
return False
try:
self.logger.info(f"正在执行取枪头操作: 位置={location}")
# 这里应该实现实际的取枪头逻辑
self.logger.info("取枪头操作完成")
return True
except Exception as e:
self.logger.error(f"取枪头操作失败: {e}")
return False
def drop_tip(self, location: Dict[str, Any]) -> bool:
"""
丢弃枪头操作
Args:
location: 丢弃位置信息
Returns:
bool: 丢弃枪头是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行丢弃枪头操作")
return False
try:
self.logger.info(f"正在执行丢弃枪头操作: 位置={location}")
# 这里应该实现实际的丢弃枪头逻辑
self.logger.info("丢弃枪头操作完成")
return True
except Exception as e:
self.logger.error(f"丢弃枪头操作失败: {e}")
return False
def move_to(self, location: Dict[str, Any]) -> bool:
"""
移动到指定位置
Args:
location: 目标位置信息
Returns:
bool: 移动是否成功
"""
if not self.is_connected:
self.logger.error("设备未连接,无法执行移动操作")
return False
try:
self.logger.info(f"正在移动到位置: {location}")
# 这里应该实现实际的移动逻辑
self.logger.info("移动操作完成")
return True
except Exception as e:
self.logger.error(f"移动操作失败: {e}")
return False
def get_status(self) -> Dict[str, Any]:
"""
获取设备状态
Returns:
Dict[str, Any]: 设备状态信息
"""
return {
"connected": self.is_connected,
"device_info": self.device_info,
"status": "ready" if self.is_connected else "disconnected"
}
# PyLabRobot 抽象方法实现
def stop(self):
"""停止所有操作"""
self.logger.info("停止所有操作")
pass
@property
def num_channels(self) -> int:
"""返回通道数量"""
return 1 # 单通道移液器
def can_pick_up_tip(self, tip_rack, tip_position) -> bool:
"""检查是否可以拾取吸头"""
return True # 简化实现总是返回True
def pick_up_tips(self, tip_rack, tip_positions):
"""拾取多个吸头"""
self.logger.info(f"拾取吸头: {tip_positions}")
pass
def drop_tips(self, tip_rack, tip_positions):
"""丢弃多个吸头"""
self.logger.info(f"丢弃吸头: {tip_positions}")
pass
def pick_up_tips96(self, tip_rack):
"""拾取96个吸头"""
self.logger.info("拾取96个吸头")
pass
def drop_tips96(self, tip_rack):
"""丢弃96个吸头"""
self.logger.info("丢弃96个吸头")
pass
def aspirate96(self, volume, plate, well_positions):
"""96通道吸液"""
self.logger.info(f"96通道吸液: 体积={volume}")
pass
def dispense96(self, volume, plate, well_positions):
"""96通道排液"""
self.logger.info(f"96通道排液: 体积={volume}")
pass
def pick_up_resource(self, resource, location):
"""拾取资源"""
self.logger.info(f"拾取资源: {resource}")
pass
def drop_resource(self, resource, location):
"""放置资源"""
self.logger.info(f"放置资源: {resource}")
pass
def move_picked_up_resource(self, resource, location):
"""移动已拾取的资源"""
self.logger.info(f"移动资源: {resource}{location}")
pass
def create_laiyu_backend(name: str = "LaiYu_Liquid_Backend") -> LaiYuLiquidBackend:
"""
创建LaiYu液体处理设备后端实例
Args:
name: 后端名称
Returns:
LaiYuLiquidBackend: 后端实例
"""
return LaiYuLiquidBackend(name)

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import json
from typing import List, Optional, Union
from pylabrobot.liquid_handling.backends.backend import (
LiquidHandlerBackend,
)
from pylabrobot.liquid_handling.standard import (
Drop,
DropTipRack,
MultiHeadAspirationContainer,
MultiHeadAspirationPlate,
MultiHeadDispenseContainer,
MultiHeadDispensePlate,
Pickup,
PickupTipRack,
ResourceDrop,
ResourceMove,
ResourcePickup,
SingleChannelAspiration,
SingleChannelDispense,
)
from pylabrobot.resources import Resource, Tip
import rclpy
from rclpy.node import Node
from sensor_msgs.msg import JointState
import time
from rclpy.action import ActionClient
from unilabos_msgs.action import SendCmd
import re
from unilabos.devices.ros_dev.liquid_handler_joint_publisher import JointStatePublisher
from unilabos.devices.liquid_handling.laiyu.controllers.pipette_controller import PipetteController, TipStatus
class UniLiquidHandlerLaiyuBackend(LiquidHandlerBackend):
"""Chatter box backend for device-free testing. Prints out all operations."""
_pip_length = 5
_vol_length = 8
_resource_length = 20
_offset_length = 16
_flow_rate_length = 10
_blowout_length = 10
_lld_z_length = 10
_kwargs_length = 15
_tip_type_length = 12
_max_volume_length = 16
_fitting_depth_length = 20
_tip_length_length = 16
# _pickup_method_length = 20
_filter_length = 10
def __init__(self, num_channels: int = 8 , tip_length: float = 0 , total_height: float = 310, port: str = "/dev/ttyUSB0"):
"""Initialize a chatter box backend."""
super().__init__()
self._num_channels = num_channels
self.tip_length = tip_length
self.total_height = total_height
# rclpy.init()
if not rclpy.ok():
rclpy.init()
self.joint_state_publisher = None
self.hardware_interface = PipetteController(port=port)
async def setup(self):
# self.joint_state_publisher = JointStatePublisher()
# self.hardware_interface.xyz_controller.connect_device()
# self.hardware_interface.xyz_controller.home_all_axes()
await super().setup()
self.hardware_interface.connect()
self.hardware_interface.initialize()
print("Setting up the liquid handler.")
async def stop(self):
print("Stopping the liquid handler.")
def serialize(self) -> dict:
return {**super().serialize(), "num_channels": self.num_channels}
def pipette_aspirate(self, volume: float, flow_rate: float):
self.hardware_interface.pipette.set_max_speed(flow_rate)
res = self.hardware_interface.pipette.aspirate(volume=volume)
if not res:
self.hardware_interface.logger.error("吸取失败,当前体积: {self.hardware_interface.current_volume}")
return
self.hardware_interface.current_volume += volume
def pipette_dispense(self, volume: float, flow_rate: float):
self.hardware_interface.pipette.set_max_speed(flow_rate)
res = self.hardware_interface.pipette.dispense(volume=volume)
if not res:
self.hardware_interface.logger.error("排液失败,当前体积: {self.hardware_interface.current_volume}")
return
self.hardware_interface.current_volume -= volume
@property
def num_channels(self) -> int:
return self._num_channels
async def assigned_resource_callback(self, resource: Resource):
print(f"Resource {resource.name} was assigned to the liquid handler.")
async def unassigned_resource_callback(self, name: str):
print(f"Resource {name} was unassigned from the liquid handler.")
async def pick_up_tips(self, ops: List[Pickup], use_channels: List[int], **backend_kwargs):
print("Picking up tips:")
# print(ops.tip)
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'tip type':<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{'max volume (µL)':<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{'fitting depth (mm)':<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{'tip length (mm)':<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{'pickup method':<{ChatterboxBackend._pickup_method_length}} "
f"{'filter':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(header)
for op, channel in zip(ops, use_channels):
offset = f"{round(op.offset.x, 1)},{round(op.offset.y, 1)},{round(op.offset.z, 1)}"
row = (
f" p{channel}: "
f"{op.resource.name[-30:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{op.tip.__class__.__name__:<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{op.tip.maximal_volume:<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{op.tip.fitting_depth:<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{op.tip.total_tip_length:<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{str(op.tip.pickup_method)[-20:]:<{ChatterboxBackend._pickup_method_length}} "
f"{'Yes' if op.tip.has_filter else 'No':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(row)
# print(op.resource.get_absolute_location())
self.tip_length = ops[0].tip.total_tip_length
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z
# print("moving")
self.hardware_interface._update_tip_status()
if self.hardware_interface.tip_status == TipStatus.TIP_ATTACHED:
print("已有枪头,无需重复拾取")
return
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z,speed=100)
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height,speed=100)
# self.joint_state_publisher.send_resource_action(ops[0].resource.name, x, y, z, "pick",channels=use_channels)
# goback()
async def drop_tips(self, ops: List[Drop], use_channels: List[int], **backend_kwargs):
print("Dropping tips:")
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'tip type':<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{'max volume (µL)':<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{'fitting depth (mm)':<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{'tip length (mm)':<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{'pickup method':<{ChatterboxBackend._pickup_method_length}} "
f"{'filter':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(header)
for op, channel in zip(ops, use_channels):
offset = f"{round(op.offset.x, 1)},{round(op.offset.y, 1)},{round(op.offset.z, 1)}"
row = (
f" p{channel}: "
f"{op.resource.name[-30:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{op.tip.__class__.__name__:<{UniLiquidHandlerLaiyuBackend._tip_type_length}} "
f"{op.tip.maximal_volume:<{UniLiquidHandlerLaiyuBackend._max_volume_length}} "
f"{op.tip.fitting_depth:<{UniLiquidHandlerLaiyuBackend._fitting_depth_length}} "
f"{op.tip.total_tip_length:<{UniLiquidHandlerLaiyuBackend._tip_length_length}} "
# f"{str(op.tip.pickup_method)[-20:]:<{ChatterboxBackend._pickup_method_length}} "
f"{'Yes' if op.tip.has_filter else 'No':<{UniLiquidHandlerLaiyuBackend._filter_length}}"
)
# print(row)
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z -20
# print(x, y, z)
# print("moving")
self.hardware_interface._update_tip_status()
if self.hardware_interface.tip_status == TipStatus.NO_TIP:
print("无枪头,无需丢弃")
return
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z)
self.hardware_interface.eject_tip
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height)
async def aspirate(
self,
ops: List[SingleChannelAspiration],
use_channels: List[int],
**backend_kwargs,
):
print("Aspirating:")
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'vol(ul)':<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'flow rate':<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{'blowout':<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{'lld_z':<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{'liquids':<20}" # TODO: add liquids
)
for key in backend_kwargs:
header += f"{key:<{UniLiquidHandlerLaiyuBackend._kwargs_length}} "[-16:]
# print(header)
for o, p in zip(ops, use_channels):
offset = f"{round(o.offset.x, 1)},{round(o.offset.y, 1)},{round(o.offset.z, 1)}"
row = (
f" p{p}: "
f"{o.volume:<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{o.resource.name[-20:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{str(o.flow_rate):<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{str(o.blow_out_air_volume):<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{str(o.liquid_height):<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{o.liquids if o.liquids is not None else 'none'}"
)
for key, value in backend_kwargs.items():
if isinstance(value, list) and all(isinstance(v, bool) for v in value):
value = "".join("T" if v else "F" for v in value)
if isinstance(value, list):
value = "".join(map(str, value))
row += f" {value:<15}"
# print(row)
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z
# print(x, y, z)
# print("moving")
# 判断枪头是否存在
self.hardware_interface._update_tip_status()
if not self.hardware_interface.tip_status == TipStatus.TIP_ATTACHED:
print("无枪头,无法吸液")
return
# 判断吸液量是否超过枪头容量
flow_rate = backend_kwargs["flow_rate"] if "flow_rate" in backend_kwargs else 500
blow_out_air_volume = backend_kwargs["blow_out_air_volume"] if "blow_out_air_volume" in backend_kwargs else 0
if self.hardware_interface.current_volume + ops[0].volume + blow_out_air_volume > self.hardware_interface.max_volume:
self.hardware_interface.logger.error(f"吸液量超过枪头容量: {self.hardware_interface.current_volume + ops[0].volume} > {self.hardware_interface.max_volume}")
return
# 移动到吸液位置
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z)
self.pipette_aspirate(volume=ops[0].volume, flow_rate=flow_rate)
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height)
if blow_out_air_volume >0:
self.pipette_aspirate(volume=blow_out_air_volume, flow_rate=flow_rate)
async def dispense(
self,
ops: List[SingleChannelDispense],
use_channels: List[int],
**backend_kwargs,
):
# print("Dispensing:")
header = (
f"{'pip#':<{UniLiquidHandlerLaiyuBackend._pip_length}} "
f"{'vol(ul)':<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{'resource':<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{'offset':<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{'flow rate':<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{'blowout':<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{'lld_z':<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{'liquids':<20}" # TODO: add liquids
)
for key in backend_kwargs:
header += f"{key:<{UniLiquidHandlerLaiyuBackend._kwargs_length}} "[-16:]
# print(header)
for o, p in zip(ops, use_channels):
offset = f"{round(o.offset.x, 1)},{round(o.offset.y, 1)},{round(o.offset.z, 1)}"
row = (
f" p{p}: "
f"{o.volume:<{UniLiquidHandlerLaiyuBackend._vol_length}} "
f"{o.resource.name[-20:]:<{UniLiquidHandlerLaiyuBackend._resource_length}} "
f"{offset:<{UniLiquidHandlerLaiyuBackend._offset_length}} "
f"{str(o.flow_rate):<{UniLiquidHandlerLaiyuBackend._flow_rate_length}} "
f"{str(o.blow_out_air_volume):<{UniLiquidHandlerLaiyuBackend._blowout_length}} "
f"{str(o.liquid_height):<{UniLiquidHandlerLaiyuBackend._lld_z_length}} "
# f"{o.liquids if o.liquids is not None else 'none'}"
)
for key, value in backend_kwargs.items():
if isinstance(value, list) and all(isinstance(v, bool) for v in value):
value = "".join("T" if v else "F" for v in value)
if isinstance(value, list):
value = "".join(map(str, value))
row += f" {value:<{UniLiquidHandlerLaiyuBackend._kwargs_length}}"
# print(row)
coordinate = ops[0].resource.get_absolute_location(x="c",y="c")
offset_xyz = ops[0].offset
x = coordinate.x + offset_xyz.x
y = coordinate.y + offset_xyz.y
z = self.total_height - (coordinate.z + self.tip_length) + offset_xyz.z
# print(x, y, z)
# print("moving")
# 判断枪头是否存在
self.hardware_interface._update_tip_status()
if not self.hardware_interface.tip_status == TipStatus.TIP_ATTACHED:
print("无枪头,无法排液")
return
# 判断排液量是否超过枪头容量
flow_rate = backend_kwargs["flow_rate"] if "flow_rate" in backend_kwargs else 500
blow_out_air_volume = backend_kwargs["blow_out_air_volume"] if "blow_out_air_volume" in backend_kwargs else 0
if self.hardware_interface.current_volume - ops[0].volume - blow_out_air_volume < 0:
self.hardware_interface.logger.error(f"排液量超过枪头容量: {self.hardware_interface.current_volume - ops[0].volume - blow_out_air_volume} < 0")
return
# 移动到排液位置
self.hardware_interface.xyz_controller.move_to_work_coord_safe(x=x, y=-y, z=z)
self.pipette_dispense(volume=ops[0].volume, flow_rate=flow_rate)
self.hardware_interface.xyz_controller.move_to_work_coord_safe(z=self.hardware_interface.xyz_controller.machine_config.safe_z_height)
if blow_out_air_volume > 0:
self.pipette_dispense(volume=blow_out_air_volume, flow_rate=flow_rate)
# self.joint_state_publisher.send_resource_action(ops[0].resource.name, x, y, z, "",channels=use_channels)
async def pick_up_tips96(self, pickup: PickupTipRack, **backend_kwargs):
print(f"Picking up tips from {pickup.resource.name}.")
async def drop_tips96(self, drop: DropTipRack, **backend_kwargs):
print(f"Dropping tips to {drop.resource.name}.")
async def aspirate96(
self, aspiration: Union[MultiHeadAspirationPlate, MultiHeadAspirationContainer]
):
if isinstance(aspiration, MultiHeadAspirationPlate):
resource = aspiration.wells[0].parent
else:
resource = aspiration.container
print(f"Aspirating {aspiration.volume} from {resource}.")
async def dispense96(self, dispense: Union[MultiHeadDispensePlate, MultiHeadDispenseContainer]):
if isinstance(dispense, MultiHeadDispensePlate):
resource = dispense.wells[0].parent
else:
resource = dispense.container
print(f"Dispensing {dispense.volume} to {resource}.")
async def pick_up_resource(self, pickup: ResourcePickup):
print(f"Picking up resource: {pickup}")
async def move_picked_up_resource(self, move: ResourceMove):
print(f"Moving picked up resource: {move}")
async def drop_resource(self, drop: ResourceDrop):
print(f"Dropping resource: {drop}")
def can_pick_up_tip(self, channel_idx: int, tip: Tip) -> bool:
return True

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"""
LaiYu_Liquid 控制器模块
该模块包含了LaiYu_Liquid液体处理工作站的高级控制器
- 移液器控制器:提供液体处理的高级接口
- XYZ运动控制器提供三轴运动的高级接口
"""
# 移液器控制器导入
from .pipette_controller import PipetteController
# XYZ运动控制器导入
from .xyz_controller import XYZController
__all__ = [
# 移液器控制器
"PipetteController",
# XYZ运动控制器
"XYZController",
]
__version__ = "1.0.0"
__author__ = "LaiYu_Liquid Controller Team"
__description__ = "LaiYu_Liquid 高级控制器集合"

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{
"machine_origin_steps": {
"x": -198.43,
"y": -94.25,
"z": -0.73
},
"work_origin_steps": {
"x": 59.39,
"y": 216.99,
"z": 2.0
},
"is_homed": true,
"timestamp": "2025-10-29T20:34:11.749055"
}

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"""
LaiYu_Liquid 液体处理工作站主要集成文件
该模块实现了 LaiYu_Liquid 与 UniLabOS 系统的集成,提供标准化的液体处理接口。
主要包含:
- LaiYuLiquidBackend: 硬件通信后端
- LaiYuLiquid: 主要接口类
- 相关的异常类和容器类
"""
import asyncio
import logging
import time
from typing import List, Optional, Dict, Any, Union, Tuple
from dataclasses import dataclass
from abc import ABC, abstractmethod
# 基础导入
try:
from pylabrobot.resources import Deck, Plate, TipRack, Tip, Resource, Well
PYLABROBOT_AVAILABLE = True
except ImportError:
# 如果 pylabrobot 不可用,创建基础的模拟类
PYLABROBOT_AVAILABLE = False
class Resource:
def __init__(self, name: str):
self.name = name
class Deck(Resource):
pass
class Plate(Resource):
pass
class TipRack(Resource):
pass
class Tip(Resource):
pass
class Well(Resource):
pass
# LaiYu_Liquid 控制器导入
try:
from .controllers.pipette_controller import (
PipetteController, TipStatus, LiquidClass, LiquidParameters
)
from .controllers.xyz_controller import (
XYZController, MachineConfig, CoordinateOrigin, MotorAxis
)
CONTROLLERS_AVAILABLE = True
except ImportError:
CONTROLLERS_AVAILABLE = False
# 创建模拟的控制器类
class PipetteController:
def __init__(self, *args, **kwargs):
pass
def connect(self):
return True
def initialize(self):
return True
class XYZController:
def __init__(self, *args, **kwargs):
pass
def connect_device(self):
return True
logger = logging.getLogger(__name__)
class LaiYuLiquidError(RuntimeError):
"""LaiYu_Liquid 设备异常"""
pass
@dataclass
class LaiYuLiquidConfig:
"""LaiYu_Liquid 设备配置"""
port: str = "/dev/cu.usbserial-3130" # RS485转USB端口
address: int = 1 # 设备地址
baudrate: int = 9600 # 波特率
timeout: float = 5.0 # 通信超时时间
# 工作台尺寸
deck_width: float = 340.0 # 工作台宽度 (mm)
deck_height: float = 250.0 # 工作台高度 (mm)
deck_depth: float = 160.0 # 工作台深度 (mm)
# 移液参数
max_volume: float = 1000.0 # 最大体积 (μL)
min_volume: float = 0.1 # 最小体积 (μL)
# 运动参数
max_speed: float = 100.0 # 最大速度 (mm/s)
acceleration: float = 50.0 # 加速度 (mm/s²)
# 安全参数
safe_height: float = 50.0 # 安全高度 (mm)
tip_pickup_depth: float = 10.0 # 吸头拾取深度 (mm)
liquid_detection: bool = True # 液面检测
# 取枪头相关参数
tip_pickup_speed: int = 30 # 取枪头时的移动速度 (rpm)
tip_pickup_acceleration: int = 500 # 取枪头时的加速度 (rpm/s)
tip_approach_height: float = 5.0 # 接近枪头时的高度 (mm)
tip_pickup_force_depth: float = 2.0 # 强制插入深度 (mm)
tip_pickup_retract_height: float = 20.0 # 取枪头后的回退高度 (mm)
# 丢弃枪头相关参数
tip_drop_height: float = 10.0 # 丢弃枪头时的高度 (mm)
tip_drop_speed: int = 50 # 丢弃枪头时的移动速度 (rpm)
trash_position: Tuple[float, float, float] = (300.0, 200.0, 0.0) # 垃圾桶位置 (mm)
# 安全范围配置
deck_width: float = 300.0 # 工作台宽度 (mm)
deck_height: float = 200.0 # 工作台高度 (mm)
deck_depth: float = 100.0 # 工作台深度 (mm)
safe_height: float = 50.0 # 安全高度 (mm)
position_validation: bool = True # 启用位置验证
emergency_stop_enabled: bool = True # 启用紧急停止
class LaiYuLiquidDeck:
"""LaiYu_Liquid 工作台管理"""
def __init__(self, config: LaiYuLiquidConfig):
self.config = config
self.resources: Dict[str, Resource] = {}
self.positions: Dict[str, Tuple[float, float, float]] = {}
def add_resource(self, name: str, resource: Resource, position: Tuple[float, float, float]):
"""添加资源到工作台"""
self.resources[name] = resource
self.positions[name] = position
def get_resource(self, name: str) -> Optional[Resource]:
"""获取资源"""
return self.resources.get(name)
def get_position(self, name: str) -> Optional[Tuple[float, float, float]]:
"""获取资源位置"""
return self.positions.get(name)
def list_resources(self) -> List[str]:
"""列出所有资源"""
return list(self.resources.keys())
class LaiYuLiquidContainer:
"""LaiYu_Liquid 容器类"""
def __init__(self, name: str, size_x: float = 0, size_y: float = 0, size_z: float = 0, container_type: str = "", volume: float = 0.0, max_volume: float = 1000.0, lid_height: float = 0.0):
self.name = name
self.size_x = size_x
self.size_y = size_y
self.size_z = size_z
self.lid_height = lid_height
self.container_type = container_type
self.volume = volume
self.max_volume = max_volume
self.last_updated = time.time()
self.child_resources = {} # 存储子资源
@property
def is_empty(self) -> bool:
return self.volume <= 0.0
@property
def is_full(self) -> bool:
return self.volume >= self.max_volume
@property
def available_volume(self) -> float:
return max(0.0, self.max_volume - self.volume)
def add_volume(self, volume: float) -> bool:
"""添加体积"""
if self.volume + volume <= self.max_volume:
self.volume += volume
self.last_updated = time.time()
return True
return False
def remove_volume(self, volume: float) -> bool:
"""移除体积"""
if self.volume >= volume:
self.volume -= volume
self.last_updated = time.time()
return True
return False
def assign_child_resource(self, resource, location=None):
"""分配子资源 - 与 PyLabRobot 资源管理系统兼容"""
if hasattr(resource, 'name'):
self.child_resources[resource.name] = {
'resource': resource,
'location': location
}
class LaiYuLiquidTipRack:
"""LaiYu_Liquid 吸头架类"""
def __init__(self, name: str, size_x: float = 0, size_y: float = 0, size_z: float = 0, tip_count: int = 96, tip_volume: float = 1000.0):
self.name = name
self.size_x = size_x
self.size_y = size_y
self.size_z = size_z
self.tip_count = tip_count
self.tip_volume = tip_volume
self.tips_available = [True] * tip_count
self.child_resources = {} # 存储子资源
@property
def available_tips(self) -> int:
return sum(self.tips_available)
@property
def is_empty(self) -> bool:
return self.available_tips == 0
def pick_tip(self, position: int) -> bool:
"""拾取吸头"""
if 0 <= position < self.tip_count and self.tips_available[position]:
self.tips_available[position] = False
return True
return False
def has_tip(self, position: int) -> bool:
"""检查位置是否有吸头"""
if 0 <= position < self.tip_count:
return self.tips_available[position]
return False
def assign_child_resource(self, resource, location=None):
"""分配子资源到指定位置"""
self.child_resources[resource.name] = {
'resource': resource,
'location': location
}
def get_module_info():
"""获取模块信息"""
return {
"name": "LaiYu_Liquid",
"version": "1.0.0",
"description": "LaiYu液体处理工作站模块提供移液器控制、XYZ轴控制和资源管理功能",
"author": "UniLabOS Team",
"capabilities": [
"移液器控制",
"XYZ轴运动控制",
"吸头架管理",
"板和容器管理",
"资源位置管理"
],
"dependencies": {
"required": ["serial"],
"optional": ["pylabrobot"]
}
}
class LaiYuLiquidBackend:
"""LaiYu_Liquid 硬件通信后端"""
def __init__(self, config: LaiYuLiquidConfig, deck: Optional['LaiYuLiquidDeck'] = None):
self.config = config
self.deck = deck # 工作台引用,用于获取资源位置信息
self.pipette_controller = None
self.xyz_controller = None
self.is_connected = False
self.is_initialized = False
# 状态跟踪
self.current_position = (0.0, 0.0, 0.0)
self.tip_attached = False
self.current_volume = 0.0
def _validate_position(self, x: float, y: float, z: float) -> bool:
"""验证位置是否在安全范围内"""
try:
# 检查X轴范围
if not (0 <= x <= self.config.deck_width):
logger.error(f"X轴位置 {x:.2f}mm 超出范围 [0, {self.config.deck_width}]")
return False
# 检查Y轴范围
if not (0 <= y <= self.config.deck_height):
logger.error(f"Y轴位置 {y:.2f}mm 超出范围 [0, {self.config.deck_height}]")
return False
# 检查Z轴范围负值表示向下0为工作台表面
if not (-self.config.deck_depth <= z <= self.config.safe_height):
logger.error(f"Z轴位置 {z:.2f}mm 超出安全范围 [{-self.config.deck_depth}, {self.config.safe_height}]")
return False
return True
except Exception as e:
logger.error(f"位置验证失败: {e}")
return False
def _check_hardware_ready(self) -> bool:
"""检查硬件是否准备就绪"""
if not self.is_connected:
logger.error("设备未连接")
return False
if CONTROLLERS_AVAILABLE:
if self.xyz_controller is None:
logger.error("XYZ控制器未初始化")
return False
return True
async def emergency_stop(self) -> bool:
"""紧急停止所有运动"""
try:
logger.warning("执行紧急停止")
if CONTROLLERS_AVAILABLE and self.xyz_controller:
# 停止XYZ控制器
await self.xyz_controller.stop_all_motion()
logger.info("XYZ控制器已停止")
if self.pipette_controller:
# 停止移液器控制器
await self.pipette_controller.stop()
logger.info("移液器控制器已停止")
return True
except Exception as e:
logger.error(f"紧急停止失败: {e}")
return False
async def move_to_safe_position(self) -> bool:
"""移动到安全位置"""
try:
if not self._check_hardware_ready():
return False
safe_position = (
self.config.deck_width / 2, # 工作台中心X
self.config.deck_height / 2, # 工作台中心Y
self.config.safe_height # 安全高度Z
)
if not self._validate_position(*safe_position):
logger.error("安全位置无效")
return False
if CONTROLLERS_AVAILABLE and self.xyz_controller:
await self.xyz_controller.move_to_work_coord(*safe_position)
self.current_position = safe_position
logger.info(f"已移动到安全位置: {safe_position}")
return True
else:
# 模拟模式
self.current_position = safe_position
logger.info("模拟移动到安全位置")
return True
except Exception as e:
logger.error(f"移动到安全位置失败: {e}")
return False
async def setup(self) -> bool:
"""设置硬件连接"""
try:
if CONTROLLERS_AVAILABLE:
# 初始化移液器控制器
self.pipette_controller = PipetteController(
port=self.config.port,
address=self.config.address
)
# 初始化XYZ控制器
machine_config = MachineConfig()
self.xyz_controller = XYZController(
port=self.config.port,
baudrate=self.config.baudrate,
machine_config=machine_config
)
# 连接设备
pipette_connected = await asyncio.to_thread(self.pipette_controller.connect)
xyz_connected = await asyncio.to_thread(self.xyz_controller.connect_device)
if pipette_connected and xyz_connected:
self.is_connected = True
logger.info("LaiYu_Liquid 硬件连接成功")
return True
else:
logger.error("LaiYu_Liquid 硬件连接失败")
return False
else:
# 模拟模式
logger.info("LaiYu_Liquid 运行在模拟模式")
self.is_connected = True
return True
except Exception as e:
logger.error(f"LaiYu_Liquid 设置失败: {e}")
return False
async def stop(self):
"""停止设备"""
try:
if self.pipette_controller and hasattr(self.pipette_controller, 'disconnect'):
await asyncio.to_thread(self.pipette_controller.disconnect)
if self.xyz_controller and hasattr(self.xyz_controller, 'disconnect'):
await asyncio.to_thread(self.xyz_controller.disconnect)
self.is_connected = False
self.is_initialized = False
logger.info("LaiYu_Liquid 已停止")
except Exception as e:
logger.error(f"LaiYu_Liquid 停止失败: {e}")
async def move_to(self, x: float, y: float, z: float) -> bool:
"""移动到指定位置"""
try:
if not self.is_connected:
raise LaiYuLiquidError("设备未连接")
# 模拟移动
await asyncio.sleep(0.1) # 模拟移动时间
self.current_position = (x, y, z)
logger.debug(f"移动到位置: ({x}, {y}, {z})")
return True
except Exception as e:
logger.error(f"移动失败: {e}")
return False
async def pick_up_tip(self, tip_rack: str, position: int) -> bool:
"""拾取吸头 - 包含真正的Z轴下降控制"""
try:
# 硬件准备检查
if not self._check_hardware_ready():
return False
if self.tip_attached:
logger.warning("已有吸头附着,无法拾取新吸头")
return False
logger.info(f"开始从 {tip_rack} 位置 {position} 拾取吸头")
# 获取枪头架位置信息
if self.deck is None:
logger.error("工作台未初始化")
return False
tip_position = self.deck.get_position(tip_rack)
if tip_position is None:
logger.error(f"未找到枪头架 {tip_rack} 的位置信息")
return False
# 计算具体枪头位置这里简化处理实际应根据position计算偏移
tip_x, tip_y, tip_z = tip_position
# 验证所有关键位置的安全性
safe_z = tip_z + self.config.tip_approach_height
pickup_z = tip_z - self.config.tip_pickup_force_depth
retract_z = tip_z + self.config.tip_pickup_retract_height
if not (self._validate_position(tip_x, tip_y, safe_z) and
self._validate_position(tip_x, tip_y, pickup_z) and
self._validate_position(tip_x, tip_y, retract_z)):
logger.error("枪头拾取位置超出安全范围")
return False
if CONTROLLERS_AVAILABLE and self.xyz_controller:
# 真实硬件控制流程
logger.info("使用真实XYZ控制器进行枪头拾取")
try:
# 1. 移动到枪头上方的安全位置
safe_z = tip_z + self.config.tip_approach_height
logger.info(f"移动到枪头上方安全位置: ({tip_x:.2f}, {tip_y:.2f}, {safe_z:.2f})")
move_success = await asyncio.to_thread(
self.xyz_controller.move_to_work_coord,
tip_x, tip_y, safe_z
)
if not move_success:
logger.error("移动到枪头上方失败")
return False
# 2. Z轴下降到枪头位置
pickup_z = tip_z - self.config.tip_pickup_force_depth
logger.info(f"Z轴下降到枪头拾取位置: {pickup_z:.2f}mm")
z_down_success = await asyncio.to_thread(
self.xyz_controller.move_to_work_coord,
tip_x, tip_y, pickup_z
)
if not z_down_success:
logger.error("Z轴下降到枪头位置失败")
return False
# 3. 等待一小段时间确保枪头牢固附着
await asyncio.sleep(0.2)
# 4. Z轴上升到回退高度
retract_z = tip_z + self.config.tip_pickup_retract_height
logger.info(f"Z轴上升到回退高度: {retract_z:.2f}mm")
z_up_success = await asyncio.to_thread(
self.xyz_controller.move_to_work_coord,
tip_x, tip_y, retract_z
)
if not z_up_success:
logger.error("Z轴上升失败")
return False
# 5. 更新当前位置
self.current_position = (tip_x, tip_y, retract_z)
except Exception as move_error:
logger.error(f"枪头拾取过程中发生错误: {move_error}")
# 尝试移动到安全位置
if self.config.emergency_stop_enabled:
await self.emergency_stop()
await self.move_to_safe_position()
return False
else:
# 模拟模式
logger.info("模拟模式:执行枪头拾取动作")
await asyncio.sleep(1.0) # 模拟整个拾取过程的时间
self.current_position = (tip_x, tip_y, tip_z + self.config.tip_pickup_retract_height)
# 6. 标记枪头已附着
self.tip_attached = True
logger.info("吸头拾取成功")
return True
except Exception as e:
logger.error(f"拾取吸头失败: {e}")
return False
async def drop_tip(self, location: str = "trash") -> bool:
"""丢弃吸头 - 包含真正的Z轴控制"""
try:
# 硬件准备检查
if not self._check_hardware_ready():
return False
if not self.tip_attached:
logger.warning("没有吸头附着,无需丢弃")
return True
logger.info(f"开始丢弃吸头到 {location}")
# 确定丢弃位置
if location == "trash":
# 使用配置中的垃圾桶位置
drop_x, drop_y, drop_z = self.config.trash_position
else:
# 尝试从deck获取指定位置
if self.deck is None:
logger.error("工作台未初始化")
return False
drop_position = self.deck.get_position(location)
if drop_position is None:
logger.error(f"未找到丢弃位置 {location} 的信息")
return False
drop_x, drop_y, drop_z = drop_position
# 验证丢弃位置的安全性
safe_z = drop_z + self.config.safe_height
drop_height_z = drop_z + self.config.tip_drop_height
if not (self._validate_position(drop_x, drop_y, safe_z) and
self._validate_position(drop_x, drop_y, drop_height_z)):
logger.error("枪头丢弃位置超出安全范围")
return False
if CONTROLLERS_AVAILABLE and self.xyz_controller:
# 真实硬件控制流程
logger.info("使用真实XYZ控制器进行枪头丢弃")
try:
# 1. 移动到丢弃位置上方的安全高度
safe_z = drop_z + self.config.tip_drop_height
logger.info(f"移动到丢弃位置上方: ({drop_x:.2f}, {drop_y:.2f}, {safe_z:.2f})")
move_success = await asyncio.to_thread(
self.xyz_controller.move_to_work_coord,
drop_x, drop_y, safe_z
)
if not move_success:
logger.error("移动到丢弃位置上方失败")
return False
# 2. Z轴下降到丢弃高度
logger.info(f"Z轴下降到丢弃高度: {drop_z:.2f}mm")
z_down_success = await asyncio.to_thread(
self.xyz_controller.move_to_work_coord,
drop_x, drop_y, drop_z
)
if not z_down_success:
logger.error("Z轴下降到丢弃位置失败")
return False
# 3. 执行枪头弹出动作(如果有移液器控制器)
if self.pipette_controller:
try:
# 发送弹出枪头命令
await asyncio.to_thread(self.pipette_controller.eject_tip)
logger.info("执行枪头弹出命令")
except Exception as e:
logger.warning(f"枪头弹出命令失败: {e}")
# 4. 等待一小段时间确保枪头完全脱离
await asyncio.sleep(0.3)
# 5. Z轴上升到安全高度
logger.info(f"Z轴上升到安全高度: {safe_z:.2f}mm")
z_up_success = await asyncio.to_thread(
self.xyz_controller.move_to_work_coord,
drop_x, drop_y, safe_z
)
if not z_up_success:
logger.error("Z轴上升失败")
return False
# 6. 更新当前位置
self.current_position = (drop_x, drop_y, safe_z)
except Exception as drop_error:
logger.error(f"枪头丢弃过程中发生错误: {drop_error}")
# 尝试移动到安全位置
if self.config.emergency_stop_enabled:
await self.emergency_stop()
await self.move_to_safe_position()
return False
else:
# 模拟模式
logger.info("模拟模式:执行枪头丢弃动作")
await asyncio.sleep(0.8) # 模拟整个丢弃过程的时间
self.current_position = (drop_x, drop_y, drop_z + self.config.tip_drop_height)
# 7. 标记枪头已脱离,清空体积
self.tip_attached = False
self.current_volume = 0.0
logger.info("吸头丢弃成功")
return True
except Exception as e:
logger.error(f"丢弃吸头失败: {e}")
return False
async def aspirate(self, volume: float, location: str) -> bool:
"""吸取液体"""
try:
if not self.is_connected:
raise LaiYuLiquidError("设备未连接")
if not self.tip_attached:
raise LaiYuLiquidError("没有吸头附着")
if volume <= 0 or volume > self.config.max_volume:
raise LaiYuLiquidError(f"体积超出范围: {volume}")
# 模拟吸取
await asyncio.sleep(0.3)
self.current_volume += volume
logger.debug(f"{location} 吸取 {volume} μL")
return True
except Exception as e:
logger.error(f"吸取失败: {e}")
return False
async def dispense(self, volume: float, location: str) -> bool:
"""分配液体"""
try:
if not self.is_connected:
raise LaiYuLiquidError("设备未连接")
if not self.tip_attached:
raise LaiYuLiquidError("没有吸头附着")
if volume <= 0 or volume > self.current_volume:
raise LaiYuLiquidError(f"分配体积无效: {volume}")
# 模拟分配
await asyncio.sleep(0.3)
self.current_volume -= volume
logger.debug(f"{location} 分配 {volume} μL")
return True
except Exception as e:
logger.error(f"分配失败: {e}")
return False
class LaiYuLiquid:
"""LaiYu_Liquid 主要接口类"""
def __init__(self, config: Optional[LaiYuLiquidConfig] = None, **kwargs):
# 如果传入了关键字参数,创建配置对象
if kwargs and config is None:
# 从kwargs中提取配置参数
config_params = {}
for key, value in kwargs.items():
if hasattr(LaiYuLiquidConfig, key):
config_params[key] = value
self.config = LaiYuLiquidConfig(**config_params)
else:
self.config = config or LaiYuLiquidConfig()
# 先创建deck然后传递给backend
self.deck = LaiYuLiquidDeck(self.config)
self.backend = LaiYuLiquidBackend(self.config, self.deck)
self.is_setup = False
@property
def current_position(self) -> Tuple[float, float, float]:
"""获取当前位置"""
return self.backend.current_position
@property
def current_volume(self) -> float:
"""获取当前体积"""
return self.backend.current_volume
@property
def is_connected(self) -> bool:
"""获取连接状态"""
return self.backend.is_connected
@property
def is_initialized(self) -> bool:
"""获取初始化状态"""
return self.backend.is_initialized
@property
def tip_attached(self) -> bool:
"""获取吸头附着状态"""
return self.backend.tip_attached
async def setup(self) -> bool:
"""设置液体处理器"""
try:
success = await self.backend.setup()
if success:
self.is_setup = True
logger.info("LaiYu_Liquid 设置完成")
return success
except Exception as e:
logger.error(f"LaiYu_Liquid 设置失败: {e}")
return False
async def stop(self):
"""停止液体处理器"""
await self.backend.stop()
self.is_setup = False
async def transfer(self, source: str, target: str, volume: float,
tip_rack: str = "tip_rack_1", tip_position: int = 0) -> bool:
"""液体转移"""
try:
if not self.is_setup:
raise LaiYuLiquidError("设备未设置")
# 获取源和目标位置
source_pos = self.deck.get_position(source)
target_pos = self.deck.get_position(target)
tip_pos = self.deck.get_position(tip_rack)
if not all([source_pos, target_pos, tip_pos]):
raise LaiYuLiquidError("位置信息不完整")
# 执行转移步骤
steps = [
("移动到吸头架", self.backend.move_to(*tip_pos)),
("拾取吸头", self.backend.pick_up_tip(tip_rack, tip_position)),
("移动到源位置", self.backend.move_to(*source_pos)),
("吸取液体", self.backend.aspirate(volume, source)),
("移动到目标位置", self.backend.move_to(*target_pos)),
("分配液体", self.backend.dispense(volume, target)),
("丢弃吸头", self.backend.drop_tip())
]
for step_name, step_coro in steps:
logger.debug(f"执行步骤: {step_name}")
success = await step_coro
if not success:
raise LaiYuLiquidError(f"步骤失败: {step_name}")
logger.info(f"液体转移完成: {source} -> {target}, {volume} μL")
return True
except Exception as e:
logger.error(f"液体转移失败: {e}")
return False
def add_resource(self, name: str, resource_type: str, position: Tuple[float, float, float]):
"""添加资源到工作台"""
if resource_type == "plate":
resource = Plate(name)
elif resource_type == "tip_rack":
resource = TipRack(name)
else:
resource = Resource(name)
self.deck.add_resource(name, resource, position)
def get_status(self) -> Dict[str, Any]:
"""获取设备状态"""
return {
"connected": self.backend.is_connected,
"setup": self.is_setup,
"current_position": self.backend.current_position,
"tip_attached": self.backend.tip_attached,
"current_volume": self.backend.current_volume,
"resources": self.deck.list_resources()
}
def create_quick_setup() -> LaiYuLiquidDeck:
"""
创建快速设置的LaiYu液体处理工作站
Returns:
LaiYuLiquidDeck: 配置好的工作台实例
"""
# 创建默认配置
config = LaiYuLiquidConfig()
# 创建工作台
deck = LaiYuLiquidDeck(config)
# 导入资源创建函数
try:
from .laiyu_liquid_res import (
create_tip_rack_1000ul,
create_tip_rack_200ul,
create_96_well_plate,
create_waste_container
)
# 添加基本资源
tip_rack_1000 = create_tip_rack_1000ul("tip_rack_1000")
tip_rack_200 = create_tip_rack_200ul("tip_rack_200")
plate_96 = create_96_well_plate("plate_96")
waste = create_waste_container("waste")
# 添加到工作台
deck.add_resource("tip_rack_1000", tip_rack_1000, (50, 50, 0))
deck.add_resource("tip_rack_200", tip_rack_200, (150, 50, 0))
deck.add_resource("plate_96", plate_96, (250, 50, 0))
deck.add_resource("waste", waste, (50, 150, 0))
except ImportError:
# 如果资源模块不可用,创建空的工作台
logger.warning("资源模块不可用,创建空的工作台")
return deck
__all__ = [
"LaiYuLiquid",
"LaiYuLiquidBackend",
"LaiYuLiquidConfig",
"LaiYuLiquidDeck",
"LaiYuLiquidContainer",
"LaiYuLiquidTipRack",
"LaiYuLiquidError",
"create_quick_setup",
"get_module_info"
]

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@@ -0,0 +1,42 @@
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
LaiYu液体处理设备核心模块
该模块包含LaiYu液体处理设备的核心功能组件
- LaiYu_Liquid.py: 主设备类和配置管理
- abstract_protocol.py: 抽象协议定义
- laiyu_liquid_res.py: 设备资源管理
作者: UniLab团队
版本: 2.0.0
"""
from .LaiYu_Liquid import (
LaiYuLiquid,
LaiYuLiquidConfig,
LaiYuLiquidDeck,
LaiYuLiquidContainer,
LaiYuLiquidTipRack,
create_quick_setup
)
from .laiyu_liquid_res import (
LaiYuLiquidDeck,
LaiYuLiquidContainer,
LaiYuLiquidTipRack
)
__all__ = [
# 主设备类
'LaiYuLiquid',
'LaiYuLiquidConfig',
# 设备资源
'LaiYuLiquidDeck',
'LaiYuLiquidContainer',
'LaiYuLiquidTipRack',
# 工具函数
'create_quick_setup'
]

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@@ -0,0 +1,529 @@
"""
LaiYu_Liquid 抽象协议实现
该模块提供了液体资源管理和转移的抽象协议,包括:
- MaterialResource: 液体资源管理类
- transfer_liquid: 液体转移函数
- 相关的辅助类和函数
主要功能:
- 管理多孔位的液体资源
- 计算和跟踪液体体积
- 处理液体转移操作
- 提供资源状态查询
"""
import logging
from typing import Dict, List, Optional, Union, Any, Tuple
from dataclasses import dataclass, field
from enum import Enum
import uuid
import time
# pylabrobot 导入
from pylabrobot.resources import Resource, Well, Plate
logger = logging.getLogger(__name__)
class LiquidType(Enum):
"""液体类型枚举"""
WATER = "water"
ETHANOL = "ethanol"
DMSO = "dmso"
BUFFER = "buffer"
SAMPLE = "sample"
REAGENT = "reagent"
WASTE = "waste"
UNKNOWN = "unknown"
@dataclass
class LiquidInfo:
"""液体信息类"""
liquid_type: LiquidType = LiquidType.UNKNOWN
volume: float = 0.0 # 体积 (μL)
concentration: Optional[float] = None # 浓度 (mg/ml, M等)
ph: Optional[float] = None # pH值
temperature: Optional[float] = None # 温度 (°C)
viscosity: Optional[float] = None # 粘度 (cP)
density: Optional[float] = None # 密度 (g/ml)
description: str = "" # 描述信息
def __str__(self) -> str:
return f"{self.liquid_type.value}({self.description})"
@dataclass
class WellContent:
"""孔位内容类"""
volume: float = 0.0 # 当前体积 (ul)
max_volume: float = 1000.0 # 最大容量 (ul)
liquid_info: LiquidInfo = field(default_factory=LiquidInfo)
last_updated: float = field(default_factory=time.time)
@property
def is_empty(self) -> bool:
"""检查是否为空"""
return self.volume <= 0.0
@property
def is_full(self) -> bool:
"""检查是否已满"""
return self.volume >= self.max_volume
@property
def available_volume(self) -> float:
"""可用体积"""
return max(0.0, self.max_volume - self.volume)
@property
def fill_percentage(self) -> float:
"""填充百分比"""
return (self.volume / self.max_volume) * 100.0 if self.max_volume > 0 else 0.0
def can_add_volume(self, volume: float) -> bool:
"""检查是否可以添加指定体积"""
return (self.volume + volume) <= self.max_volume
def can_remove_volume(self, volume: float) -> bool:
"""检查是否可以移除指定体积"""
return self.volume >= volume
def add_volume(self, volume: float, liquid_info: Optional[LiquidInfo] = None) -> bool:
"""
添加液体体积
Args:
volume: 要添加的体积 (ul)
liquid_info: 液体信息
Returns:
bool: 是否成功添加
"""
if not self.can_add_volume(volume):
return False
self.volume += volume
if liquid_info:
self.liquid_info = liquid_info
self.last_updated = time.time()
return True
def remove_volume(self, volume: float) -> bool:
"""
移除液体体积
Args:
volume: 要移除的体积 (ul)
Returns:
bool: 是否成功移除
"""
if not self.can_remove_volume(volume):
return False
self.volume -= volume
self.last_updated = time.time()
# 如果完全清空,重置液体信息
if self.volume <= 0.0:
self.volume = 0.0
self.liquid_info = LiquidInfo()
return True
class MaterialResource:
"""
液体资源管理类
该类用于管理液体处理过程中的资源状态,包括:
- 跟踪多个孔位的液体体积和类型
- 计算总体积和可用体积
- 处理液体的添加和移除
- 提供资源状态查询
"""
def __init__(
self,
resource: Resource,
wells: Optional[List[Well]] = None,
default_max_volume: float = 1000.0
):
"""
初始化材料资源
Args:
resource: pylabrobot 资源对象
wells: 孔位列表如果为None则自动获取
default_max_volume: 默认最大体积 (ul)
"""
self.resource = resource
self.resource_id = str(uuid.uuid4())
self.default_max_volume = default_max_volume
# 获取孔位列表
if wells is None:
if hasattr(resource, 'get_wells'):
self.wells = resource.get_wells()
elif hasattr(resource, 'wells'):
self.wells = resource.wells
else:
# 如果没有孔位,创建一个虚拟孔位
self.wells = [resource]
else:
self.wells = wells
# 初始化孔位内容
self.well_contents: Dict[str, WellContent] = {}
for well in self.wells:
well_id = self._get_well_id(well)
self.well_contents[well_id] = WellContent(
max_volume=default_max_volume
)
logger.info(f"初始化材料资源: {resource.name}, 孔位数: {len(self.wells)}")
def _get_well_id(self, well: Union[Well, Resource]) -> str:
"""获取孔位ID"""
if hasattr(well, 'name'):
return well.name
else:
return str(id(well))
@property
def name(self) -> str:
"""资源名称"""
return self.resource.name
@property
def total_volume(self) -> float:
"""总液体体积"""
return sum(content.volume for content in self.well_contents.values())
@property
def total_max_volume(self) -> float:
"""总最大容量"""
return sum(content.max_volume for content in self.well_contents.values())
@property
def available_volume(self) -> float:
"""总可用体积"""
return sum(content.available_volume for content in self.well_contents.values())
@property
def well_count(self) -> int:
"""孔位数量"""
return len(self.wells)
@property
def empty_wells(self) -> List[str]:
"""空孔位列表"""
return [well_id for well_id, content in self.well_contents.items()
if content.is_empty]
@property
def full_wells(self) -> List[str]:
"""满孔位列表"""
return [well_id for well_id, content in self.well_contents.items()
if content.is_full]
@property
def occupied_wells(self) -> List[str]:
"""有液体的孔位列表"""
return [well_id for well_id, content in self.well_contents.items()
if not content.is_empty]
def get_well_content(self, well_id: str) -> Optional[WellContent]:
"""获取指定孔位的内容"""
return self.well_contents.get(well_id)
def get_well_volume(self, well_id: str) -> float:
"""获取指定孔位的体积"""
content = self.get_well_content(well_id)
return content.volume if content else 0.0
def set_well_volume(
self,
well_id: str,
volume: float,
liquid_info: Optional[LiquidInfo] = None
) -> bool:
"""
设置指定孔位的体积
Args:
well_id: 孔位ID
volume: 体积 (ul)
liquid_info: 液体信息
Returns:
bool: 是否成功设置
"""
if well_id not in self.well_contents:
logger.error(f"孔位 {well_id} 不存在")
return False
content = self.well_contents[well_id]
if volume > content.max_volume:
logger.error(f"体积 {volume} 超过最大容量 {content.max_volume}")
return False
content.volume = max(0.0, volume)
if liquid_info:
content.liquid_info = liquid_info
content.last_updated = time.time()
logger.info(f"设置孔位 {well_id} 体积: {volume}ul")
return True
def add_liquid(
self,
well_id: str,
volume: float,
liquid_info: Optional[LiquidInfo] = None
) -> bool:
"""
向指定孔位添加液体
Args:
well_id: 孔位ID
volume: 添加的体积 (ul)
liquid_info: 液体信息
Returns:
bool: 是否成功添加
"""
if well_id not in self.well_contents:
logger.error(f"孔位 {well_id} 不存在")
return False
content = self.well_contents[well_id]
success = content.add_volume(volume, liquid_info)
if success:
logger.info(f"向孔位 {well_id} 添加 {volume}ul 液体")
else:
logger.error(f"无法向孔位 {well_id} 添加 {volume}ul 液体")
return success
def remove_liquid(self, well_id: str, volume: float) -> bool:
"""
从指定孔位移除液体
Args:
well_id: 孔位ID
volume: 移除的体积 (ul)
Returns:
bool: 是否成功移除
"""
if well_id not in self.well_contents:
logger.error(f"孔位 {well_id} 不存在")
return False
content = self.well_contents[well_id]
success = content.remove_volume(volume)
if success:
logger.info(f"从孔位 {well_id} 移除 {volume}ul 液体")
else:
logger.error(f"无法从孔位 {well_id} 移除 {volume}ul 液体")
return success
def find_wells_with_volume(self, min_volume: float) -> List[str]:
"""
查找具有指定最小体积的孔位
Args:
min_volume: 最小体积 (ul)
Returns:
List[str]: 符合条件的孔位ID列表
"""
return [well_id for well_id, content in self.well_contents.items()
if content.volume >= min_volume]
def find_wells_with_space(self, min_space: float) -> List[str]:
"""
查找具有指定最小空间的孔位
Args:
min_space: 最小空间 (ul)
Returns:
List[str]: 符合条件的孔位ID列表
"""
return [well_id for well_id, content in self.well_contents.items()
if content.available_volume >= min_space]
def get_status_summary(self) -> Dict[str, Any]:
"""获取资源状态摘要"""
return {
"resource_name": self.name,
"resource_id": self.resource_id,
"well_count": self.well_count,
"total_volume": self.total_volume,
"total_max_volume": self.total_max_volume,
"available_volume": self.available_volume,
"fill_percentage": (self.total_volume / self.total_max_volume) * 100.0,
"empty_wells": len(self.empty_wells),
"full_wells": len(self.full_wells),
"occupied_wells": len(self.occupied_wells)
}
def get_detailed_status(self) -> Dict[str, Any]:
"""获取详细状态信息"""
well_details = {}
for well_id, content in self.well_contents.items():
well_details[well_id] = {
"volume": content.volume,
"max_volume": content.max_volume,
"available_volume": content.available_volume,
"fill_percentage": content.fill_percentage,
"liquid_type": content.liquid_info.liquid_type.value,
"description": content.liquid_info.description,
"last_updated": content.last_updated
}
return {
"summary": self.get_status_summary(),
"wells": well_details
}
def transfer_liquid(
source: MaterialResource,
target: MaterialResource,
volume: float,
source_well_id: Optional[str] = None,
target_well_id: Optional[str] = None,
liquid_info: Optional[LiquidInfo] = None
) -> bool:
"""
在两个材料资源之间转移液体
Args:
source: 源资源
target: 目标资源
volume: 转移体积 (ul)
source_well_id: 源孔位ID如果为None则自动选择
target_well_id: 目标孔位ID如果为None则自动选择
liquid_info: 液体信息
Returns:
bool: 转移是否成功
"""
try:
# 自动选择源孔位
if source_well_id is None:
available_wells = source.find_wells_with_volume(volume)
if not available_wells:
logger.error(f"源资源 {source.name} 没有足够体积的孔位")
return False
source_well_id = available_wells[0]
# 自动选择目标孔位
if target_well_id is None:
available_wells = target.find_wells_with_space(volume)
if not available_wells:
logger.error(f"目标资源 {target.name} 没有足够空间的孔位")
return False
target_well_id = available_wells[0]
# 检查源孔位是否有足够液体
if not source.get_well_content(source_well_id).can_remove_volume(volume):
logger.error(f"源孔位 {source_well_id} 液体不足")
return False
# 检查目标孔位是否有足够空间
if not target.get_well_content(target_well_id).can_add_volume(volume):
logger.error(f"目标孔位 {target_well_id} 空间不足")
return False
# 获取源液体信息
source_content = source.get_well_content(source_well_id)
transfer_liquid_info = liquid_info or source_content.liquid_info
# 执行转移
if source.remove_liquid(source_well_id, volume):
if target.add_liquid(target_well_id, volume, transfer_liquid_info):
logger.info(f"成功转移 {volume}ul 液体: {source.name}[{source_well_id}] -> {target.name}[{target_well_id}]")
return True
else:
# 如果目标添加失败,回滚源操作
source.add_liquid(source_well_id, volume, source_content.liquid_info)
logger.error("目标添加失败,已回滚源操作")
return False
else:
logger.error("源移除失败")
return False
except Exception as e:
logger.error(f"液体转移失败: {e}")
return False
def create_material_resource(
name: str,
resource: Resource,
initial_volumes: Optional[Dict[str, float]] = None,
liquid_info: Optional[LiquidInfo] = None,
max_volume: float = 1000.0
) -> MaterialResource:
"""
创建材料资源的便捷函数
Args:
name: 资源名称
resource: pylabrobot 资源对象
initial_volumes: 初始体积字典 {well_id: volume}
liquid_info: 液体信息
max_volume: 最大体积
Returns:
MaterialResource: 创建的材料资源
"""
material_resource = MaterialResource(
resource=resource,
default_max_volume=max_volume
)
# 设置初始体积
if initial_volumes:
for well_id, volume in initial_volumes.items():
material_resource.set_well_volume(well_id, volume, liquid_info)
return material_resource
def batch_transfer_liquid(
transfers: List[Tuple[MaterialResource, MaterialResource, float]],
liquid_info: Optional[LiquidInfo] = None
) -> List[bool]:
"""
批量液体转移
Args:
transfers: 转移列表 [(source, target, volume), ...]
liquid_info: 液体信息
Returns:
List[bool]: 每个转移操作的结果
"""
results = []
for source, target, volume in transfers:
result = transfer_liquid(source, target, volume, liquid_info=liquid_info)
results.append(result)
if not result:
logger.warning(f"批量转移中的操作失败: {source.name} -> {target.name}")
success_count = sum(results)
logger.info(f"批量转移完成: {success_count}/{len(transfers)} 成功")
return results

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"""
LaiYu_Liquid 资源定义模块
该模块提供了 LaiYu_Liquid 工作站专用的资源定义函数,包括:
- 各种规格的枪头架
- 不同类型的板和容器
- 特殊功能位置
- 资源创建的便捷函数
所有资源都基于 deck.json 中的配置参数创建。
"""
import json
import os
from typing import Dict, List, Optional, Tuple, Any
from pathlib import Path
# PyLabRobot 资源导入
try:
from pylabrobot.resources import (
Resource, Deck, Plate, TipRack, Container, Tip,
Coordinate
)
from pylabrobot.resources.tip_rack import TipSpot
from pylabrobot.resources.well import Well as PlateWell
PYLABROBOT_AVAILABLE = True
except ImportError:
# 如果 PyLabRobot 不可用,创建模拟类
PYLABROBOT_AVAILABLE = False
class Resource:
def __init__(self, name: str):
self.name = name
class Deck(Resource):
pass
class Plate(Resource):
pass
class TipRack(Resource):
pass
class Container(Resource):
pass
class Tip(Resource):
pass
class TipSpot(Resource):
def __init__(self, name: str, **kwargs):
super().__init__(name)
# 忽略其他参数
class PlateWell(Resource):
pass
class Coordinate:
def __init__(self, x: float, y: float, z: float):
self.x = x
self.y = y
self.z = z
# 本地导入
from .LaiYu_Liquid import LaiYuLiquidDeck, LaiYuLiquidContainer, LaiYuLiquidTipRack
def load_deck_config() -> Dict[str, Any]:
"""
加载工作台配置文件
Returns:
Dict[str, Any]: 配置字典
"""
# 优先使用最新的deckconfig.json文件
config_path = Path(__file__).parent / "controllers" / "deckconfig.json"
# 如果最新配置文件不存在,回退到旧配置文件
if not config_path.exists():
config_path = Path(__file__).parent / "config" / "deck.json"
try:
with open(config_path, 'r', encoding='utf-8') as f:
return json.load(f)
except FileNotFoundError:
# 如果找不到配置文件,返回默认配置
return {
"name": "LaiYu_Liquid_Deck",
"size_x": 340.0,
"size_y": 250.0,
"size_z": 160.0
}
# 加载配置
DECK_CONFIG = load_deck_config()
class LaiYuTipRack1000(LaiYuLiquidTipRack):
"""1000μL 枪头架"""
def __init__(self, name: str):
"""
初始化1000μL枪头架
Args:
name: 枪头架名称
"""
super().__init__(
name=name,
size_x=127.76,
size_y=85.48,
size_z=30.0,
tip_count=96,
tip_volume=1000.0
)
# 创建枪头位置
self._create_tip_spots(
tip_count=96,
tip_spacing=9.0,
tip_type="1000ul"
)
def _create_tip_spots(self, tip_count: int, tip_spacing: float, tip_type: str):
"""
创建枪头位置 - 从配置文件中读取绝对坐标
Args:
tip_count: 枪头数量
tip_spacing: 枪头间距
tip_type: 枪头类型
"""
# 从配置文件中获取枪头架的孔位信息
config = DECK_CONFIG
tip_module = None
# 查找枪头架模块
for module in config.get("children", []):
if module.get("type") == "tip_rack":
tip_module = module
break
if not tip_module:
# 如果配置文件中没有找到,使用默认的相对坐标计算
rows = 8
cols = 12
for row in range(rows):
for col in range(cols):
spot_name = f"{chr(65 + row)}{col + 1:02d}"
x = col * tip_spacing + tip_spacing / 2
y = row * tip_spacing + tip_spacing / 2
# 创建枪头 - 根据PyLabRobot或模拟类使用不同参数
if PYLABROBOT_AVAILABLE:
# PyLabRobot的Tip需要特定参数
tip = Tip(
has_filter=False,
total_tip_length=95.0, # 1000ul枪头长度
maximal_volume=1000.0, # 最大体积
fitting_depth=8.0 # 安装深度
)
else:
# 模拟类只需要name
tip = Tip(name=f"tip_{spot_name}")
# 创建枪头位置
if PYLABROBOT_AVAILABLE:
# PyLabRobot的TipSpot需要特定参数
tip_spot = TipSpot(
name=spot_name,
size_x=9.0, # 枪头位置宽度
size_y=9.0, # 枪头位置深度
size_z=95.0, # 枪头位置高度
make_tip=lambda: tip # 创建枪头的函数
)
else:
# 模拟类只需要name
tip_spot = TipSpot(name=spot_name)
# 将吸头位置分配到吸头架
self.assign_child_resource(
tip_spot,
location=Coordinate(x, y, 0)
)
return
# 使用配置文件中的绝对坐标
module_position = tip_module.get("position", {"x": 0, "y": 0, "z": 0})
for well_config in tip_module.get("wells", []):
spot_name = well_config["id"]
well_pos = well_config["position"]
# 计算相对于模块的坐标(绝对坐标减去模块位置)
relative_x = well_pos["x"] - module_position["x"]
relative_y = well_pos["y"] - module_position["y"]
relative_z = well_pos["z"] - module_position["z"]
# 创建枪头 - 根据PyLabRobot或模拟类使用不同参数
if PYLABROBOT_AVAILABLE:
# PyLabRobot的Tip需要特定参数
tip = Tip(
has_filter=False,
total_tip_length=95.0, # 1000ul枪头长度
maximal_volume=1000.0, # 最大体积
fitting_depth=8.0 # 安装深度
)
else:
# 模拟类只需要name
tip = Tip(name=f"tip_{spot_name}")
# 创建枪头位置
if PYLABROBOT_AVAILABLE:
# PyLabRobot的TipSpot需要特定参数
tip_spot = TipSpot(
name=spot_name,
size_x=well_config.get("diameter", 9.0), # 使用配置中的直径
size_y=well_config.get("diameter", 9.0),
size_z=well_config.get("depth", 95.0), # 使用配置中的深度
make_tip=lambda: tip # 创建枪头的函数
)
else:
# 模拟类只需要name
tip_spot = TipSpot(name=spot_name)
# 将吸头位置分配到吸头架
self.assign_child_resource(
tip_spot,
location=Coordinate(relative_x, relative_y, relative_z)
)
# 注意在PyLabRobot中Tip不是Resource不需要分配给TipSpot
# TipSpot的make_tip函数会在需要时创建Tip
class LaiYuTipRack200(LaiYuLiquidTipRack):
"""200μL 枪头架"""
def __init__(self, name: str):
"""
初始化200μL枪头架
Args:
name: 枪头架名称
"""
super().__init__(
name=name,
size_x=127.76,
size_y=85.48,
size_z=30.0,
tip_count=96,
tip_volume=200.0
)
# 创建枪头位置
self._create_tip_spots(
tip_count=96,
tip_spacing=9.0,
tip_type="200ul"
)
def _create_tip_spots(self, tip_count: int, tip_spacing: float, tip_type: str):
"""
创建枪头位置
Args:
tip_count: 枪头数量
tip_spacing: 枪头间距
tip_type: 枪头类型
"""
rows = 8
cols = 12
for row in range(rows):
for col in range(cols):
spot_name = f"{chr(65 + row)}{col + 1:02d}"
x = col * tip_spacing + tip_spacing / 2
y = row * tip_spacing + tip_spacing / 2
# 创建枪头 - 根据PyLabRobot或模拟类使用不同参数
if PYLABROBOT_AVAILABLE:
# PyLabRobot的Tip需要特定参数
tip = Tip(
has_filter=False,
total_tip_length=72.0, # 200ul枪头长度
maximal_volume=200.0, # 最大体积
fitting_depth=8.0 # 安装深度
)
else:
# 模拟类只需要name
tip = Tip(name=f"tip_{spot_name}")
# 创建枪头位置
if PYLABROBOT_AVAILABLE:
# PyLabRobot的TipSpot需要特定参数
tip_spot = TipSpot(
name=spot_name,
size_x=9.0, # 枪头位置宽度
size_y=9.0, # 枪头位置深度
size_z=72.0, # 枪头位置高度
make_tip=lambda: tip # 创建枪头的函数
)
else:
# 模拟类只需要name
tip_spot = TipSpot(name=spot_name)
# 将吸头位置分配到吸头架
self.assign_child_resource(
tip_spot,
location=Coordinate(x, y, 0)
)
# 注意在PyLabRobot中Tip不是Resource不需要分配给TipSpot
# TipSpot的make_tip函数会在需要时创建Tip
class LaiYu96WellPlate(LaiYuLiquidContainer):
"""96孔板"""
def __init__(self, name: str, lid_height: float = 0.0):
"""
初始化96孔板
Args:
name: 板名称
lid_height: 盖子高度
"""
super().__init__(
name=name,
size_x=127.76,
size_y=85.48,
size_z=14.22,
container_type="96_well_plate",
volume=0.0,
max_volume=200.0,
lid_height=lid_height
)
# 创建孔位
self._create_wells(
well_count=96,
well_volume=200.0,
well_spacing=9.0
)
def get_size_z(self) -> float:
"""获取孔位深度"""
return 10.0 # 96孔板孔位深度
def _create_wells(self, well_count: int, well_volume: float, well_spacing: float):
"""
创建孔位 - 从配置文件中读取绝对坐标
Args:
well_count: 孔位数量
well_volume: 孔位体积
well_spacing: 孔位间距
"""
# 从配置文件中获取96孔板的孔位信息
config = DECK_CONFIG
plate_module = None
# 查找96孔板模块
for module in config.get("children", []):
if module.get("type") == "96_well_plate":
plate_module = module
break
if not plate_module:
# 如果配置文件中没有找到,使用默认的相对坐标计算
rows = 8
cols = 12
for row in range(rows):
for col in range(cols):
well_name = f"{chr(65 + row)}{col + 1:02d}"
x = col * well_spacing + well_spacing / 2
y = row * well_spacing + well_spacing / 2
# 创建孔位
well = PlateWell(
name=well_name,
size_x=well_spacing * 0.8,
size_y=well_spacing * 0.8,
size_z=self.get_size_z(),
max_volume=well_volume
)
# 添加到板
self.assign_child_resource(
well,
location=Coordinate(x, y, 0)
)
return
# 使用配置文件中的绝对坐标
module_position = plate_module.get("position", {"x": 0, "y": 0, "z": 0})
for well_config in plate_module.get("wells", []):
well_name = well_config["id"]
well_pos = well_config["position"]
# 计算相对于模块的坐标(绝对坐标减去模块位置)
relative_x = well_pos["x"] - module_position["x"]
relative_y = well_pos["y"] - module_position["y"]
relative_z = well_pos["z"] - module_position["z"]
# 创建孔位
well = PlateWell(
name=well_name,
size_x=well_config.get("diameter", 8.2) * 0.8, # 使用配置中的直径
size_y=well_config.get("diameter", 8.2) * 0.8,
size_z=well_config.get("depth", self.get_size_z()),
max_volume=well_config.get("volume", well_volume)
)
# 添加到板
self.assign_child_resource(
well,
location=Coordinate(relative_x, relative_y, relative_z)
)
class LaiYuDeepWellPlate(LaiYuLiquidContainer):
"""深孔板"""
def __init__(self, name: str, lid_height: float = 0.0):
"""
初始化深孔板
Args:
name: 板名称
lid_height: 盖子高度
"""
super().__init__(
name=name,
size_x=127.76,
size_y=85.48,
size_z=41.3,
container_type="deep_well_plate",
volume=0.0,
max_volume=2000.0,
lid_height=lid_height
)
# 创建孔位
self._create_wells(
well_count=96,
well_volume=2000.0,
well_spacing=9.0
)
def get_size_z(self) -> float:
"""获取孔位深度"""
return 35.0 # 深孔板孔位深度
def _create_wells(self, well_count: int, well_volume: float, well_spacing: float):
"""
创建孔位 - 从配置文件中读取绝对坐标
Args:
well_count: 孔位数量
well_volume: 孔位体积
well_spacing: 孔位间距
"""
# 从配置文件中获取深孔板的孔位信息
config = DECK_CONFIG
plate_module = None
# 查找深孔板模块通常是第二个96孔板模块
plate_modules = []
for module in config.get("children", []):
if module.get("type") == "96_well_plate":
plate_modules.append(module)
# 如果有多个96孔板模块选择第二个作为深孔板
if len(plate_modules) > 1:
plate_module = plate_modules[1]
elif len(plate_modules) == 1:
plate_module = plate_modules[0]
if not plate_module:
# 如果配置文件中没有找到,使用默认的相对坐标计算
rows = 8
cols = 12
for row in range(rows):
for col in range(cols):
well_name = f"{chr(65 + row)}{col + 1:02d}"
x = col * well_spacing + well_spacing / 2
y = row * well_spacing + well_spacing / 2
# 创建孔位
well = PlateWell(
name=well_name,
size_x=well_spacing * 0.8,
size_y=well_spacing * 0.8,
size_z=self.get_size_z(),
max_volume=well_volume
)
# 添加到板
self.assign_child_resource(
well,
location=Coordinate(x, y, 0)
)
return
# 使用配置文件中的绝对坐标
module_position = plate_module.get("position", {"x": 0, "y": 0, "z": 0})
for well_config in plate_module.get("wells", []):
well_name = well_config["id"]
well_pos = well_config["position"]
# 计算相对于模块的坐标(绝对坐标减去模块位置)
relative_x = well_pos["x"] - module_position["x"]
relative_y = well_pos["y"] - module_position["y"]
relative_z = well_pos["z"] - module_position["z"]
# 创建孔位
well = PlateWell(
name=well_name,
size_x=well_config.get("diameter", 8.2) * 0.8, # 使用配置中的直径
size_y=well_config.get("diameter", 8.2) * 0.8,
size_z=well_config.get("depth", self.get_size_z()),
max_volume=well_config.get("volume", well_volume)
)
# 添加到板
self.assign_child_resource(
well,
location=Coordinate(relative_x, relative_y, relative_z)
)
class LaiYuWasteContainer(Container):
"""废液容器"""
def __init__(self, name: str):
"""
初始化废液容器
Args:
name: 容器名称
"""
super().__init__(
name=name,
size_x=100.0,
size_y=100.0,
size_z=50.0,
max_volume=5000.0
)
class LaiYuWashContainer(Container):
"""清洗容器"""
def __init__(self, name: str):
"""
初始化清洗容器
Args:
name: 容器名称
"""
super().__init__(
name=name,
size_x=100.0,
size_y=100.0,
size_z=50.0,
max_volume=5000.0
)
class LaiYuReagentContainer(Container):
"""试剂容器"""
def __init__(self, name: str):
"""
初始化试剂容器
Args:
name: 容器名称
"""
super().__init__(
name=name,
size_x=50.0,
size_y=50.0,
size_z=100.0,
max_volume=2000.0
)
class LaiYu8TubeRack(LaiYuLiquidContainer):
"""8管试管架"""
def __init__(self, name: str):
"""
初始化8管试管架
Args:
name: 试管架名称
"""
super().__init__(
name=name,
size_x=151.0,
size_y=75.0,
size_z=75.0,
container_type="tube_rack",
volume=0.0,
max_volume=77000.0
)
# 创建孔位
self._create_wells(
well_count=8,
well_volume=77000.0,
well_spacing=35.0
)
def get_size_z(self) -> float:
"""获取孔位深度"""
return 117.0 # 试管深度
def _create_wells(self, well_count: int, well_volume: float, well_spacing: float):
"""
创建孔位 - 从配置文件中读取绝对坐标
Args:
well_count: 孔位数量
well_volume: 孔位体积
well_spacing: 孔位间距
"""
# 从配置文件中获取8管试管架的孔位信息
config = DECK_CONFIG
tube_module = None
# 查找8管试管架模块
for module in config.get("children", []):
if module.get("type") == "tube_rack":
tube_module = module
break
if not tube_module:
# 如果配置文件中没有找到,使用默认的相对坐标计算
rows = 2
cols = 4
for row in range(rows):
for col in range(cols):
well_name = f"{chr(65 + row)}{col + 1}"
x = col * well_spacing + well_spacing / 2
y = row * well_spacing + well_spacing / 2
# 创建孔位
well = PlateWell(
name=well_name,
size_x=29.0,
size_y=29.0,
size_z=self.get_size_z(),
max_volume=well_volume
)
# 添加到试管架
self.assign_child_resource(
well,
location=Coordinate(x, y, 0)
)
return
# 使用配置文件中的绝对坐标
module_position = tube_module.get("position", {"x": 0, "y": 0, "z": 0})
for well_config in tube_module.get("wells", []):
well_name = well_config["id"]
well_pos = well_config["position"]
# 计算相对于模块的坐标(绝对坐标减去模块位置)
relative_x = well_pos["x"] - module_position["x"]
relative_y = well_pos["y"] - module_position["y"]
relative_z = well_pos["z"] - module_position["z"]
# 创建孔位
well = PlateWell(
name=well_name,
size_x=well_config.get("diameter", 29.0),
size_y=well_config.get("diameter", 29.0),
size_z=well_config.get("depth", self.get_size_z()),
max_volume=well_config.get("volume", well_volume)
)
# 添加到试管架
self.assign_child_resource(
well,
location=Coordinate(relative_x, relative_y, relative_z)
)
class LaiYuTipDisposal(Resource):
"""枪头废料位置"""
def __init__(self, name: str):
"""
初始化枪头废料位置
Args:
name: 位置名称
"""
super().__init__(
name=name,
size_x=100.0,
size_y=100.0,
size_z=50.0
)
class LaiYuMaintenancePosition(Resource):
"""维护位置"""
def __init__(self, name: str):
"""
初始化维护位置
Args:
name: 位置名称
"""
super().__init__(
name=name,
size_x=50.0,
size_y=50.0,
size_z=100.0
)
# 资源创建函数
def create_tip_rack_1000ul(name: str = "tip_rack_1000ul") -> LaiYuTipRack1000:
"""
创建1000μL枪头架
Args:
name: 枪头架名称
Returns:
LaiYuTipRack1000: 1000μL枪头架实例
"""
return LaiYuTipRack1000(name)
def create_tip_rack_200ul(name: str = "tip_rack_200ul") -> LaiYuTipRack200:
"""
创建200μL枪头架
Args:
name: 枪头架名称
Returns:
LaiYuTipRack200: 200μL枪头架实例
"""
return LaiYuTipRack200(name)
def create_96_well_plate(name: str = "96_well_plate", lid_height: float = 0.0) -> LaiYu96WellPlate:
"""
创建96孔板
Args:
name: 板名称
lid_height: 盖子高度
Returns:
LaiYu96WellPlate: 96孔板实例
"""
return LaiYu96WellPlate(name, lid_height)
def create_deep_well_plate(name: str = "deep_well_plate", lid_height: float = 0.0) -> LaiYuDeepWellPlate:
"""
创建深孔板
Args:
name: 板名称
lid_height: 盖子高度
Returns:
LaiYuDeepWellPlate: 深孔板实例
"""
return LaiYuDeepWellPlate(name, lid_height)
def create_8_tube_rack(name: str = "8_tube_rack") -> LaiYu8TubeRack:
"""
创建8管试管架
Args:
name: 试管架名称
Returns:
LaiYu8TubeRack: 8管试管架实例
"""
return LaiYu8TubeRack(name)
def create_waste_container(name: str = "waste_container") -> LaiYuWasteContainer:
"""
创建废液容器
Args:
name: 容器名称
Returns:
LaiYuWasteContainer: 废液容器实例
"""
return LaiYuWasteContainer(name)
def create_wash_container(name: str = "wash_container") -> LaiYuWashContainer:
"""
创建清洗容器
Args:
name: 容器名称
Returns:
LaiYuWashContainer: 清洗容器实例
"""
return LaiYuWashContainer(name)
def create_reagent_container(name: str = "reagent_container") -> LaiYuReagentContainer:
"""
创建试剂容器
Args:
name: 容器名称
Returns:
LaiYuReagentContainer: 试剂容器实例
"""
return LaiYuReagentContainer(name)
def create_tip_disposal(name: str = "tip_disposal") -> LaiYuTipDisposal:
"""
创建枪头废料位置
Args:
name: 位置名称
Returns:
LaiYuTipDisposal: 枪头废料位置实例
"""
return LaiYuTipDisposal(name)
def create_maintenance_position(name: str = "maintenance_position") -> LaiYuMaintenancePosition:
"""
创建维护位置
Args:
name: 位置名称
Returns:
LaiYuMaintenancePosition: 维护位置实例
"""
return LaiYuMaintenancePosition(name)
def create_standard_deck() -> LaiYuLiquidDeck:
"""
创建标准工作台配置
Returns:
LaiYuLiquidDeck: 配置好的工作台实例
"""
# 从配置文件创建工作台
deck = LaiYuLiquidDeck(config=DECK_CONFIG)
return deck
def get_resource_by_name(deck: LaiYuLiquidDeck, name: str) -> Optional[Resource]:
"""
根据名称获取资源
Args:
deck: 工作台实例
name: 资源名称
Returns:
Optional[Resource]: 找到的资源如果不存在则返回None
"""
for child in deck.children:
if child.name == name:
return child
return None
def get_resources_by_type(deck: LaiYuLiquidDeck, resource_type: type) -> List[Resource]:
"""
根据类型获取资源列表
Args:
deck: 工作台实例
resource_type: 资源类型
Returns:
List[Resource]: 匹配类型的资源列表
"""
return [child for child in deck.children if isinstance(child, resource_type)]
def list_all_resources(deck: LaiYuLiquidDeck) -> Dict[str, List[str]]:
"""
列出所有资源
Args:
deck: 工作台实例
Returns:
Dict[str, List[str]]: 按类型分组的资源名称字典
"""
resources = {
"tip_racks": [],
"plates": [],
"containers": [],
"positions": []
}
for child in deck.children:
if isinstance(child, (LaiYuTipRack1000, LaiYuTipRack200)):
resources["tip_racks"].append(child.name)
elif isinstance(child, (LaiYu96WellPlate, LaiYuDeepWellPlate)):
resources["plates"].append(child.name)
elif isinstance(child, (LaiYuWasteContainer, LaiYuWashContainer, LaiYuReagentContainer)):
resources["containers"].append(child.name)
elif isinstance(child, (LaiYuTipDisposal, LaiYuMaintenancePosition)):
resources["positions"].append(child.name)
return resources
# 导出的类别名(向后兼容)
TipRack1000ul = LaiYuTipRack1000
TipRack200ul = LaiYuTipRack200
Plate96Well = LaiYu96WellPlate
Plate96DeepWell = LaiYuDeepWellPlate
TubeRack8 = LaiYu8TubeRack
WasteContainer = LaiYuWasteContainer
WashContainer = LaiYuWashContainer
ReagentContainer = LaiYuReagentContainer
TipDisposal = LaiYuTipDisposal
MaintenancePosition = LaiYuMaintenancePosition

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