mirror of
https://github.com/deepmodeling/Uni-Lab-OS
synced 2026-03-25 06:14:24 +00:00
Device registry port (#49)
* Update README and MQTTClient for installation instructions and code improvements * feat: 支持local_config启动 add: 增加对crt path的说明，为传入config.py的相对路径 move: web component * add: registry description * add 3d visualization * 完成在main中启动设备可视化 完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model 添加物料模型管理类，遍历物料与resource_model，完成TF数据收集 * 完成TF发布 * 修改模型方向，在yaml中添加变换属性 * 添加物料tf变化时，发送topic到前端 另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题 * 添加关节发布节点与物料可视化节点进入unilab * 使用json启动plr与3D模型仿真 * feat: node_info_update srv fix: OTDeck cant create * close #12 feat: slave node registry * feat: show machine name fix: host node registry not uploaded * feat: add hplc registry * feat: add hplc registry * fix: hplc status typo * fix: devices/ * 完成启动OT并联动rviz * add 3d visualization * 完成在main中启动设备可视化 完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model 添加物料模型管理类，遍历物料与resource_model，完成TF数据收集 * 完成TF发布 * 修改模型方向，在yaml中添加变换属性 * 添加物料tf变化时，发送topic到前端 另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题 * 添加关节发布节点与物料可视化节点进入unilab * 使用json启动plr与3D模型仿真 * 完成启动OT并联动rviz * fix: device.class possible null * fix: HPLC additions with online service * fix: slave mode spin not working * fix: slave mode spin not working * 修复rviz位置问题, 修复rviz位置问题, 在无tf变动时减缓发送频率 在backend中添加物料跟随方法 * feat: 多ProtocolNode 允许子设备ID相同 feat: 上报发现的ActionClient feat: Host重启动，通过discover机制要求slaveNode重新注册，实现信息及时上报 * feat: 支持env设置config * fix: running logic * fix: running logic * fix: missing ot * 在main中直接初始化republisher和物料的mesh节点 * 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中 * Device visualization (#14) * add 3d visualization * 完成在main中启动设备可视化 完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model 添加物料模型管理类，遍历物料与resource_model，完成TF数据收集 * 完成TF发布 * 修改模型方向，在yaml中添加变换属性 * 添加物料tf变化时，发送topic到前端 另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题 * 添加关节发布节点与物料可视化节点进入unilab * 使用json启动plr与3D模型仿真 * 完成启动OT并联动rviz * add 3d visualization * 完成在main中启动设备可视化 完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model 添加物料模型管理类，遍历物料与resource_model，完成TF数据收集 * 完成TF发布 * 修改模型方向，在yaml中添加变换属性 * 添加物料tf变化时，发送topic到前端 另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题 * 添加关节发布节点与物料可视化节点进入unilab * 使用json启动plr与3D模型仿真 * 完成启动OT并联动rviz * 修复rviz位置问题, 修复rviz位置问题, 在无tf变动时减缓发送频率 在backend中添加物料跟随方法 * fix: running logic * fix: running logic * fix: missing ot * 在main中直接初始化republisher和物料的mesh节点 * 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中 --------- Co-authored-by: zhangshixiang <@zhangshixiang> Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com> * fix: missing hostname in devices_names fix: upload_file for model file * fix: missing paho-mqtt package bump version to 0.9.0 * fix startup add ResourceCreateFromOuter.action * fix type hint * update actions * update actions * host node add_resource_from_outer fix cmake list * pass device config to device class * add: bind_parent_ids to resource create action fix: message convert string * fix: host node should not be re_discovered * feat: resource tracker support dict * feat: add more necessary params * feat: fix boolean null in registry action data * feat: add outer resource * 编写mesh添加action * feat: append resource * add action * feat: vis 2d for plr * fix * fix: browser on rviz * fix: cloud bridge error fallback to local * fix: salve auto run rviz * 初始化两个plate * Device visualization (#22) * add 3d visualization * 完成在main中启动设备可视化 完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model 添加物料模型管理类，遍历物料与resource_model，完成TF数据收集 * 完成TF发布 * 修改模型方向，在yaml中添加变换属性 * 添加物料tf变化时，发送topic到前端 另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题 * 添加关节发布节点与物料可视化节点进入unilab * 使用json启动plr与3D模型仿真 * 完成启动OT并联动rviz * add 3d visualization * 完成在main中启动设备可视化 完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model 添加物料模型管理类，遍历物料与resource_model，完成TF数据收集 * 完成TF发布 * 修改模型方向，在yaml中添加变换属性 * 添加物料tf变化时，发送topic到前端 另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题 * 添加关节发布节点与物料可视化节点进入unilab * 使用json启动plr与3D模型仿真 * 完成启动OT并联动rviz * 修复rviz位置问题, 修复rviz位置问题, 在无tf变动时减缓发送频率 在backend中添加物料跟随方法 * fix: running logic * fix: running logic * fix: missing ot * 在main中直接初始化republisher和物料的mesh节点 * 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中 * 编写mesh添加action * add action * fix * fix: browser on rviz * fix: cloud bridge error fallback to local * fix: salve auto run rviz * 初始化两个plate --------- Co-authored-by: zhangshixiang <@zhangshixiang> Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com> * fix: multi channel * fix: aspirate * fix: aspirate * fix: aspirate * fix: aspirate * 提交 * fix: jobadd * fix: jobadd * fix: msg converter * tijiao * add resource creat easy action * identify debug msg * mq client id * unify liquid_handler definition * Update virtual_device.yaml * 更正了stir和heater的连接方式 * 区分了虚拟仪器中的八通阀和电磁阀，添加了两个阀门的驱动 * 修改了add protocol * 修复了阀门更新版的bug * 修复了添加protocol前缀导致的不能启动的bug * Fix handles * bump version to 0.9.6 * add resource edge upload * update container registry and handles * add virtual_separator virtual_rotavap fix transfer_pump * fix container value add parent_name to edge device id * 大图的问题都修复好了，添加了gassource和vacuum pump的驱动以及注册表 * default resource upload mode is false * 添加了icon的文件名在注册表里面 * 修改了json图中link的格式 * fix resource and edge upload * fix device ports * Fix edge id * 移除device的父节点关联 * separate registry sync and resource_add * 默认不进行注册表报送，通过命令unilabos-register或者增加启动参数 * 完善tip * protocol node不再嵌套显示 * bump version to 0.9.7 新增一个测试PumpTransferProtocol的teststation，亲测可以运行，将八通阀们和转移泵与pump_protocol适配 * protocol node 执行action不应携带自身device id * 添加了一套简易双八通阀工作站JSON，亲测能跑 * 修复了很多protocol，亲测能跑 * 添加了run column和filter through的protocol，亲测能跑 * fix mock_reactor * 修改了大图和小图的json，但是在前端上没看到改变 --------- Co-authored-by: Harvey Que <Q-Query@outlook.com> Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com> Co-authored-by: zhangshixiang <@zhangshixiang> Co-authored-by: q434343 <73513873+q434343@users.noreply.github.com> Co-authored-by: Junhan Chang <changjh@pku.edu.cn>
This commit is contained in:
Kongchang Feng
GitHub
@@ -49,7 +49,7 @@ conda env update --file unilabos-[YOUR_OS].yml -n environment_name
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# Currently, you need to install the `unilabos_msgs` package
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# Currently, you need to install the `unilabos_msgs` package
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# You can download the system-specific package from the Release page
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# You can download the system-specific package from the Release page
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conda install ros-humble-unilabos-msgs-0.9.5-xxxxx.tar.bz2
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conda install ros-humble-unilabos-msgs-0.9.7-xxxxx.tar.bz2
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# Install PyLabRobot and other prerequisites
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# Install PyLabRobot and other prerequisites
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git clone https://github.com/PyLabRobot/pylabrobot plr_repo
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git clone https://github.com/PyLabRobot/pylabrobot plr_repo
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@@ -49,7 +49,7 @@ conda env update --file unilabos-[YOUR_OS].yml -n 环境名
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# 现阶段，需要安装 `unilabos_msgs` 包
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# 现阶段，需要安装 `unilabos_msgs` 包
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# 可以前往 Release 页面下载系统对应的包进行安装
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# 可以前往 Release 页面下载系统对应的包进行安装
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conda install ros-humble-unilabos-msgs-0.9.5-xxxxx.tar.bz2
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conda install ros-humble-unilabos-msgs-0.9.7-xxxxx.tar.bz2
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# 安装PyLabRobot等前置
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# 安装PyLabRobot等前置
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git clone https://github.com/PyLabRobot/pylabrobot plr_repo
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git clone https://github.com/PyLabRobot/pylabrobot plr_repo
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@@ -1,6 +1,6 @@
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package:
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package:
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name: ros-humble-unilabos-msgs
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name: ros-humble-unilabos-msgs
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version: 0.9.5
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version: 0.9.7
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source:
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source:
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path: ../../unilabos_msgs
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path: ../../unilabos_msgs
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folder: ros-humble-unilabos-msgs/src/work
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folder: ros-humble-unilabos-msgs/src/work
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@@ -50,12 +50,12 @@ requirements:
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- robostack-staging::ros-humble-rosidl-default-generators
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- robostack-staging::ros-humble-rosidl-default-generators
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- robostack-staging::ros-humble-std-msgs
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- robostack-staging::ros-humble-std-msgs
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- robostack-staging::ros-humble-geometry-msgs
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- robostack-staging::ros-humble-geometry-msgs
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- robostack-staging::ros2-distro-mutex=0.6.*
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- robostack-staging::ros2-distro-mutex=0.5.*
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run:
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run:
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- robostack-staging::ros-humble-action-msgs
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- robostack-staging::ros-humble-action-msgs
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- robostack-staging::ros-humble-ros-workspace
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- robostack-staging::ros-humble-ros-workspace
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- robostack-staging::ros-humble-rosidl-default-runtime
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- robostack-staging::ros-humble-rosidl-default-runtime
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- robostack-staging::ros-humble-std-msgs
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- robostack-staging::ros-humble-std-msgs
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- robostack-staging::ros-humble-geometry-msgs
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- robostack-staging::ros-humble-geometry-msgs
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- robostack-staging::ros2-distro-mutex=0.6.*
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# - robostack-staging::ros2-distro-mutex=0.6.*
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- sel(osx and x86_64): __osx >={{ MACOSX_DEPLOYMENT_TARGET|default('10.14') }}
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- sel(osx and x86_64): __osx >={{ MACOSX_DEPLOYMENT_TARGET|default('10.14') }}
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@@ -1,6 +1,6 @@
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package:
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package:
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name: unilabos
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name: unilabos
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version: "0.9.5"
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version: "0.9.7"
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source:
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source:
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path: ../..
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path: ../..
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3
setup.py
3
setup.py
@@ -4,7 +4,7 @@ package_name = 'unilabos'
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setup(
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setup(
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name=package_name,
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name=package_name,
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version='0.9.5',
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version='0.9.7',
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packages=find_packages(),
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packages=find_packages(),
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include_package_data=True,
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include_package_data=True,
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install_requires=['setuptools'],
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install_requires=['setuptools'],
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@@ -17,6 +17,7 @@ setup(
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entry_points={
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entry_points={
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'console_scripts': [
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'console_scripts': [
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"unilab = unilabos.app.main:main",
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"unilab = unilabos.app.main:main",
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"unilab-register = unilabos.app.register:main"
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],
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],
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},
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},
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)
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)
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@@ -0,0 +1,563 @@
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{
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"nodes": [
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{
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"id": "AddProtocolTestStation",
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"name": "添加协议测试站",
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"children": [
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"transfer_pump_1",
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"transfer_pump_2",
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"multiway_valve_1",
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"multiway_valve_2",
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"stirrer_1",
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"stirrer_2",
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"flask_DMF",
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"flask_ethyl_acetate",
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"flask_methanol",
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"flask_acetone",
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"flask_water",
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"flask_air",
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"main_reactor",
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"secondary_reactor",
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"waste_workup",
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"collection_bottle_1",
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"collection_bottle_2"
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],
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"parent": null,
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"type": "device",
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"class": "workstation",
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"position": {
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"x": 500,
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"y": 200,
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"z": 0
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},
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"config": {
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"protocol_type": ["PumpTransferProtocol", "AddProtocol"]
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},
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"data": {}
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},
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{
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"id": "transfer_pump_1",
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"name": "转移泵1",
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"children": [],
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"parent": "AddProtocolTestStation",
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"type": "device",
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"class": "virtual_transfer_pump",
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"position": {
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"x": 250,
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"y": 300,
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"z": 0
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},
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"config": {
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"port": "VIRTUAL_PUMP1",
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"max_volume": 25.0,
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"transfer_rate": 5.0
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},
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"data": {
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"position": 0.0,
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"status": "Idle"
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}
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},
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{
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"id": "transfer_pump_2",
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"name": "转移泵2",
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"children": [],
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"parent": "AddProtocolTestStation",
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"type": "device",
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"class": "virtual_transfer_pump",
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"position": {
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"x": 750,
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"y": 300,
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"z": 0
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},
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"config": {
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"port": "VIRTUAL_PUMP2",
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"max_volume": 25.0,
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"transfer_rate": 5.0
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},
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"data": {
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"position": 0.0,
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"status": "Idle"
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}
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},
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{
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"id": "multiway_valve_1",
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"name": "试剂分配阀",
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"children": [],
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"parent": "AddProtocolTestStation",
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"type": "device",
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"class": "virtual_multiway_valve",
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"position": {
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"x": 250,
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"y": 400,
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"z": 0
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},
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"config": {
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"port": "VIRTUAL_VALVE1",
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"positions": 8
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},
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"data": {
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"current_position": 1
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}
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},
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{
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"id": "multiway_valve_2",
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"name": "反应器分配阀",
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"children": [],
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"parent": "AddProtocolTestStation",
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"type": "device",
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"class": "virtual_multiway_valve",
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"position": {
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"x": 750,
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"y": 400,
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"z": 0
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},
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"config": {
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"port": "VIRTUAL_VALVE2",
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"positions": 8
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},
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"data": {
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"current_position": 1
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}
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},
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{
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"id": "stirrer_1",
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"name": "主反应器搅拌器",
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"children": [],
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"parent": "AddProtocolTestStation",
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"type": "device",
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"class": "virtual_stirrer",
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"position": {
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"x": 600,
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"y": 450,
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"z": 0
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},
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"config": {
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"port": "VIRTUAL_STIRRER1",
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"max_speed": 1500.0,
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"default_speed": 300.0
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},
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"data": {
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"speed": 0.0,
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"status": "Stopped"
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}
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},
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{
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"id": "stirrer_2",
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||||||
|
"name": "副反应器搅拌器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_stirrer",
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_STIRRER2",
|
||||||
|
"max_speed": 1500.0,
|
||||||
|
"default_speed": 300.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"speed": 0.0,
|
||||||
|
"status": "Stopped"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_DMF",
|
||||||
|
"name": "DMF试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 50,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "DMF",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethyl_acetate",
|
||||||
|
"name": "乙酸乙酯试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 150,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethyl_acetate",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_methanol",
|
||||||
|
"name": "甲醇试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "methanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_acetone",
|
||||||
|
"name": "丙酮试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 350,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "acetone",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_water",
|
||||||
|
"name": "蒸馏水瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 450,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 550,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "secondary_reactor",
|
||||||
|
"name": "副反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液处理瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_2",
|
||||||
|
"name": "收集瓶2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "8",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_DMF",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_DMF",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_DMF": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethyl_acetate",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethyl_acetate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_ethyl_acetate": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_methanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_methanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_methanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_acetone",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_acetone",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_acetone": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_water",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_water",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"flask_water": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "6",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_main_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"main_reactor": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_secondary_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "secondary_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"secondary_reactor": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection1",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "7",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection2",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "8",
|
||||||
|
"collection_bottle_2": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_stirrer1_main_reactor",
|
||||||
|
"source": "stirrer_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"stirrer_1": "stirrer_head",
|
||||||
|
"main_reactor": "stirrer_port"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_stirrer2_secondary_reactor",
|
||||||
|
"source": "stirrer_2",
|
||||||
|
"target": "secondary_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"stirrer_2": "stirrer_head",
|
||||||
|
"secondary_reactor": "stirrer_port"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,438 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "CentrifugeProtocolTestStation",
|
||||||
|
"name": "离心协议测试站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"centrifuge_1",
|
||||||
|
"reaction_mixture",
|
||||||
|
"centrifuge_tube",
|
||||||
|
"collection_bottle_1",
|
||||||
|
"flask_water",
|
||||||
|
"flask_ethanol",
|
||||||
|
"flask_acetone",
|
||||||
|
"flask_air",
|
||||||
|
"waste_workup"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"CentrifugeProtocol",
|
||||||
|
"PumpTransferProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "主转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "副转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "溶剂分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "样品分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "centrifuge_1",
|
||||||
|
"name": "离心机",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_centrifuge",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_CENTRIFUGE1",
|
||||||
|
"max_speed": 15000.0,
|
||||||
|
"max_temp": 40.0,
|
||||||
|
"min_temp": 4.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reaction_mixture",
|
||||||
|
"name": "反应混合物",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "cell_suspension",
|
||||||
|
"liquid_volume": 200.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "centrifuge_tube",
|
||||||
|
"name": "离心管",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 15.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "上清液收集瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_water",
|
||||||
|
"name": "蒸馏水瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 900.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethanol",
|
||||||
|
"name": "乙醇清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_acetone",
|
||||||
|
"name": "丙酮清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "acetone",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CentrifugeProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_water",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_water",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_water": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_ethanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_acetone",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_acetone",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_acetone": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reaction_mixture",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "reaction_mixture",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"reaction_mixture": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_centrifuge_tube",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "centrifuge_tube",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"centrifuge_tube": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "4",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_centrifuge1_centrifuge_tube",
|
||||||
|
"source": "centrifuge_1",
|
||||||
|
"target": "centrifuge_tube",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"centrifuge_1": "centrifuge",
|
||||||
|
"centrifuge_tube": "centrifuge_port"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,426 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "CleanVesselProtocolTestStation",
|
||||||
|
"name": "容器清洗协议测试站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"heatchill_1",
|
||||||
|
"flask_water",
|
||||||
|
"flask_acetone",
|
||||||
|
"flask_ethanol",
|
||||||
|
"flask_air",
|
||||||
|
"main_reactor",
|
||||||
|
"secondary_reactor",
|
||||||
|
"waste_workup"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"CleanVesselProtocol",
|
||||||
|
"PumpTransferProtocol",
|
||||||
|
"HeatChillProtocol",
|
||||||
|
"HeatChillStartProtocol",
|
||||||
|
"HeatChillStopProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "主清洗泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.5
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "副清洗泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 450,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.5
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "溶剂分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "容器分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 450,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "heatchill_1",
|
||||||
|
"name": "加热清洗器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_heatchill",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_HEATCHILL1",
|
||||||
|
"max_temp": 100.0,
|
||||||
|
"min_temp": 10.0,
|
||||||
|
"max_stir_speed": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_water",
|
||||||
|
"name": "蒸馏水瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 50,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 900.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_acetone",
|
||||||
|
"name": "丙酮清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 150,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "acetone",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethanol",
|
||||||
|
"name": "乙醇清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 350,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "residue",
|
||||||
|
"liquid_volume": 50.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "secondary_reactor",
|
||||||
|
"name": "副反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "organic_residue",
|
||||||
|
"liquid_volume": 30.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "清洗废液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "CleanVesselProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 3000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "6",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_water",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_water",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_water": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_acetone",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_acetone",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_acetone": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_ethanol": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_main_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"main_reactor": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_secondary_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "secondary_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"secondary_reactor": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "4",
|
||||||
|
"waste_workup": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_air_return",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_heatchill1_main_reactor",
|
||||||
|
"source": "heatchill_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"heatchill_1": "heatchill",
|
||||||
|
"main_reactor": "bind"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,367 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "DualValvePumpStation",
|
||||||
|
"name": "双阀门泵站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"flask_DMF",
|
||||||
|
"flask_ethyl_acetate",
|
||||||
|
"flask_methanol",
|
||||||
|
"flask_air",
|
||||||
|
"main_reactor",
|
||||||
|
"waste_workup",
|
||||||
|
"collection_bottle_1"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": ["PumpTransferProtocol"]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "转移泵1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "转移泵2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "第一个八通阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "第二个八通阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_DMF",
|
||||||
|
"name": "DMF试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "DMF",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethyl_acetate",
|
||||||
|
"name": "乙酸乙酯试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethyl_acetate",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_methanol",
|
||||||
|
"name": "甲醇试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "methanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液处理瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "DualValvePumpStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "8",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_DMF",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_DMF",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_DMF": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethyl_acetate",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethyl_acetate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_ethyl_acetate": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_methanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_methanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_methanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"main_reactor": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "7",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,557 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "EvacuateRefillTestStation",
|
||||||
|
"name": "抽真空充气测试站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"flask_DMF",
|
||||||
|
"flask_ethyl_acetate",
|
||||||
|
"flask_methanol",
|
||||||
|
"flask_air",
|
||||||
|
"vacuum_pump_1",
|
||||||
|
"gas_source_nitrogen",
|
||||||
|
"gas_source_air",
|
||||||
|
"solenoid_valve_vacuum",
|
||||||
|
"solenoid_valve_gas",
|
||||||
|
"main_reactor",
|
||||||
|
"stirrer_1",
|
||||||
|
"waste_workup",
|
||||||
|
"collection_bottle_1"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": ["PumpTransferProtocol", "EvacuateAndRefillProtocol"]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "转移泵1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "转移泵2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "第一个八通阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "第二个八通阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "vacuum_pump_1",
|
||||||
|
"name": "真空泵1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_vacuum_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 150,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VACUUM1",
|
||||||
|
"max_pressure": -0.9
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "OFF",
|
||||||
|
"pressure": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "gas_source_nitrogen",
|
||||||
|
"name": "氮气源",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_gas_source",
|
||||||
|
"position": {
|
||||||
|
"x": 850,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_GAS_N2",
|
||||||
|
"gas_type": "nitrogen",
|
||||||
|
"max_pressure": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "OFF",
|
||||||
|
"flow_rate": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "gas_source_air",
|
||||||
|
"name": "空气源",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_gas_source",
|
||||||
|
"position": {
|
||||||
|
"x": 950,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_GAS_AIR",
|
||||||
|
"gas_type": "air",
|
||||||
|
"max_pressure": 3.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "OFF",
|
||||||
|
"flow_rate": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "solenoid_valve_vacuum",
|
||||||
|
"name": "真空电磁阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_solenoid_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 225,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_SOLENOID_VACUUM"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"valve_position": "CLOSED"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "solenoid_valve_gas",
|
||||||
|
"name": "气源电磁阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_solenoid_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 775,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_SOLENOID_GAS"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"valve_position": "CLOSED"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_DMF",
|
||||||
|
"name": "DMF试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "DMF",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethyl_acetate",
|
||||||
|
"name": "乙酸乙酯试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethyl_acetate",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_methanol",
|
||||||
|
"name": "甲醇试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "methanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "stirrer_1",
|
||||||
|
"name": "搅拌器1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_stirrer",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_STIRRER1",
|
||||||
|
"max_speed": 1500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"speed": 0.0,
|
||||||
|
"status": "OFF"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液处理瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvacuateRefillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "8",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_vacuum_solenoid",
|
||||||
|
"source": "vacuum_pump_1",
|
||||||
|
"target": "solenoid_valve_vacuum",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"vacuum_pump_1": "outlet",
|
||||||
|
"solenoid_valve_vacuum": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_solenoid_vacuum_valve1",
|
||||||
|
"source": "solenoid_valve_vacuum",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"solenoid_valve_vacuum": "outlet",
|
||||||
|
"multiway_valve_1": "7"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_gas_solenoid",
|
||||||
|
"source": "gas_source_nitrogen",
|
||||||
|
"target": "solenoid_valve_gas",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"gas_source_nitrogen": "outlet",
|
||||||
|
"solenoid_valve_gas": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_solenoid_gas_valve2",
|
||||||
|
"source": "solenoid_valve_gas",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"solenoid_valve_gas": "outlet",
|
||||||
|
"multiway_valve_2": "8"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_air_source_valve2",
|
||||||
|
"source": "gas_source_air",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"gas_source_air": "outlet",
|
||||||
|
"multiway_valve_2": "2"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_DMF",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_DMF",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_DMF": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethyl_acetate",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethyl_acetate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_ethyl_acetate": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_methanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_methanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_methanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"main_reactor": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "7",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_stirrer_reactor",
|
||||||
|
"source": "stirrer_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"stirrer_1": "stirrer",
|
||||||
|
"main_reactor": "stirrer"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,503 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "EvaporateProtocolTestStation",
|
||||||
|
"name": "蒸发协议测试站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"rotavap_1",
|
||||||
|
"heatchill_1",
|
||||||
|
"reaction_mixture",
|
||||||
|
"rotavap_flask",
|
||||||
|
"rotavap_condenser",
|
||||||
|
"flask_distillate",
|
||||||
|
"flask_ethanol",
|
||||||
|
"flask_acetone",
|
||||||
|
"flask_water",
|
||||||
|
"flask_air",
|
||||||
|
"waste_workup"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"EvaporateProtocol",
|
||||||
|
"PumpTransferProtocol",
|
||||||
|
"HeatChillProtocol",
|
||||||
|
"HeatChillStartProtocol",
|
||||||
|
"HeatChillStopProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "主转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.5
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "副转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.5
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "溶剂分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "容器分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "rotavap_1",
|
||||||
|
"name": "旋转蒸发仪",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_rotavap",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_ROTAVAP1",
|
||||||
|
"max_temp": 180.0,
|
||||||
|
"max_rotation_speed": 280.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Ready"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "heatchill_1",
|
||||||
|
"name": "预加热器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_heatchill",
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_HEATCHILL1",
|
||||||
|
"max_temp": 100.0,
|
||||||
|
"min_temp": 10.0,
|
||||||
|
"max_stir_speed": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reaction_mixture",
|
||||||
|
"name": "反应混合物",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "reaction_mixture",
|
||||||
|
"liquid_volume": 600.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "rotavap_flask",
|
||||||
|
"name": "旋蒸样品瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "rotavap_condenser",
|
||||||
|
"name": "旋蒸冷凝器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_distillate",
|
||||||
|
"name": "溶剂回收瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethanol",
|
||||||
|
"name": "乙醇清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 50,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_acetone",
|
||||||
|
"name": "丙酮清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 150,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "acetone",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_water",
|
||||||
|
"name": "蒸馏水瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 900.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 350,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "EvaporateProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 3000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_ethanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_acetone",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_acetone",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_acetone": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_water",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_water",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_water": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reaction_mixture",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "reaction_mixture",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"reaction_mixture": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_rotavap_flask",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "rotavap_flask",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"rotavap_flask": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_rotavap_condenser",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "rotavap_condenser",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "4",
|
||||||
|
"rotavap_condenser": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_distillate",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "flask_distillate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"flask_distillate": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_rotavap1_rotavap_flask",
|
||||||
|
"source": "rotavap_1",
|
||||||
|
"target": "rotavap_flask",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"rotavap_1": "rotavap-sample",
|
||||||
|
"rotavap_flask": "rotavap_port"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_heatchill1_reaction_mixture",
|
||||||
|
"source": "heatchill_1",
|
||||||
|
"target": "reaction_mixture",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"heatchill_1": "heatchill",
|
||||||
|
"reaction_mixture": "heating_jacket"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,534 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "FilterProtocolTestStation",
|
||||||
|
"name": "过滤协议测试站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"filter_1",
|
||||||
|
"heatchill_1",
|
||||||
|
"reaction_mixture",
|
||||||
|
"filter_vessel",
|
||||||
|
"filtrate_vessel",
|
||||||
|
"collection_bottle_1",
|
||||||
|
"collection_bottle_2",
|
||||||
|
"flask_water",
|
||||||
|
"flask_ethanol",
|
||||||
|
"flask_acetone",
|
||||||
|
"flask_air",
|
||||||
|
"waste_workup"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"FilterProtocol",
|
||||||
|
"PumpTransferProtocol",
|
||||||
|
"HeatChillProtocol",
|
||||||
|
"HeatChillStartProtocol",
|
||||||
|
"HeatChillStopProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "主转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "副转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "溶剂分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "样品分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "filter_1",
|
||||||
|
"name": "过滤器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_filter",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_FILTER1",
|
||||||
|
"max_temp": 100.0,
|
||||||
|
"max_stir_speed": 1000.0,
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "heatchill_1",
|
||||||
|
"name": "加热搅拌器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_heatchill",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_HEATCHILL1",
|
||||||
|
"max_temp": 100.0,
|
||||||
|
"min_temp": 4.0,
|
||||||
|
"max_stir_speed": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reaction_mixture",
|
||||||
|
"name": "反应混合物",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "cell_suspension",
|
||||||
|
"liquid_volume": 200.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "filter_vessel",
|
||||||
|
"name": "过滤器容器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "filtrate_vessel",
|
||||||
|
"name": "滤液收集容器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_2",
|
||||||
|
"name": "收集瓶2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_water",
|
||||||
|
"name": "蒸馏水瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 900.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethanol",
|
||||||
|
"name": "乙醇清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_acetone",
|
||||||
|
"name": "丙酮清洗瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "acetone",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "FilterProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_water",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_water",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_water": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_ethanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_acetone",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_acetone",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_acetone": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reaction_mixture",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "reaction_mixture",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"reaction_mixture": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_filter_vessel",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "filter_vessel",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"filter_vessel": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_filtrate_vessel",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "filtrate_vessel",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "4",
|
||||||
|
"filtrate_vessel": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection1",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection2",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"collection_bottle_2": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "7",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_filter1_filter_vessel",
|
||||||
|
"source": "filter_1",
|
||||||
|
"target": "filter_vessel",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"filter_1": "filter",
|
||||||
|
"filter_vessel": "filter_port"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_heatchill1_filter_vessel",
|
||||||
|
"source": "heatchill_1",
|
||||||
|
"target": "filter_vessel",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"heatchill_1": "heatchill",
|
||||||
|
"filter_vessel": "heating_jacket"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,671 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "HeatChillProtocolTestStation",
|
||||||
|
"name": "加热冷却协议测试站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"stirrer_1",
|
||||||
|
"stirrer_2",
|
||||||
|
"heatchill_1",
|
||||||
|
"heatchill_2",
|
||||||
|
"flask_DMF",
|
||||||
|
"flask_ethyl_acetate",
|
||||||
|
"flask_methanol",
|
||||||
|
"flask_acetone",
|
||||||
|
"flask_water",
|
||||||
|
"flask_ethanol",
|
||||||
|
"flask_air",
|
||||||
|
"main_reactor",
|
||||||
|
"secondary_reactor",
|
||||||
|
"waste_workup",
|
||||||
|
"collection_bottle_1",
|
||||||
|
"collection_bottle_2"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"PumpTransferProtocol",
|
||||||
|
"AddProtocol",
|
||||||
|
"HeatChillProtocol",
|
||||||
|
"HeatChillStartProtocol",
|
||||||
|
"HeatChillStopProtocol",
|
||||||
|
"DissolveProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "转移泵1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "转移泵2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 750,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "试剂分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "反应器分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 750,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "stirrer_1",
|
||||||
|
"name": "主反应器搅拌器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_stirrer",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_STIRRER1",
|
||||||
|
"max_speed": 1500.0,
|
||||||
|
"default_speed": 300.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"speed": 0.0,
|
||||||
|
"status": "Stopped"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "stirrer_2",
|
||||||
|
"name": "副反应器搅拌器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_stirrer",
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_STIRRER2",
|
||||||
|
"max_speed": 1500.0,
|
||||||
|
"default_speed": 300.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"speed": 0.0,
|
||||||
|
"status": "Stopped"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "heatchill_1",
|
||||||
|
"name": "主反应器加热冷却器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_heatchill",
|
||||||
|
"position": {
|
||||||
|
"x": 550,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_HEATCHILL1",
|
||||||
|
"max_temp": 200.0,
|
||||||
|
"min_temp": -80.0,
|
||||||
|
"max_stir_speed": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "heatchill_2",
|
||||||
|
"name": "副反应器加热冷却器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_heatchill",
|
||||||
|
"position": {
|
||||||
|
"x": 850,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_HEATCHILL2",
|
||||||
|
"max_temp": 200.0,
|
||||||
|
"min_temp": -80.0,
|
||||||
|
"max_stir_speed": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_DMF",
|
||||||
|
"name": "DMF试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 50,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "DMF",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethyl_acetate",
|
||||||
|
"name": "乙酸乙酯试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 150,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethyl_acetate",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_methanol",
|
||||||
|
"name": "甲醇试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "methanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethanol",
|
||||||
|
"name": "乙醇试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 650,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_acetone",
|
||||||
|
"name": "丙酮试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 350,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "acetone",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_water",
|
||||||
|
"name": "蒸馏水瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 450,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 550,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "secondary_reactor",
|
||||||
|
"name": "副反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液处理瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_2",
|
||||||
|
"name": "收集瓶2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "HeatChillProtocolTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "8",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_DMF",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_DMF",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_DMF": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethyl_acetate",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethyl_acetate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_ethyl_acetate": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_methanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_methanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_methanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_acetone",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_acetone",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_acetone": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_water",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_water",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"flask_water": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "6",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_main_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"main_reactor": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_secondary_reactor",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "secondary_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"secondary_reactor": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_waste",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection1",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "7",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_collection2",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "collection_bottle_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "8",
|
||||||
|
"collection_bottle_2": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_stirrer1_main_reactor",
|
||||||
|
"source": "stirrer_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"stirrer_1": "stirrer_head",
|
||||||
|
"main_reactor": "stirrer_port"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_stirrer2_secondary_reactor",
|
||||||
|
"source": "stirrer_2",
|
||||||
|
"target": "secondary_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"stirrer_2": "stirrer_head",
|
||||||
|
"secondary_reactor": "stirrer_port"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_heatchill1_main_reactor",
|
||||||
|
"source": "heatchill_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "thermal",
|
||||||
|
"port": {
|
||||||
|
"heatchill_1": "heating_surface",
|
||||||
|
"main_reactor": "heating_jacket"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_heatchill2_secondary_reactor",
|
||||||
|
"source": "heatchill_2",
|
||||||
|
"target": "secondary_reactor",
|
||||||
|
"type": "thermal",
|
||||||
|
"port": {
|
||||||
|
"heatchill_2": "heating_surface",
|
||||||
|
"secondary_reactor": "heating_jacket"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "7",
|
||||||
|
"flask_ethanol": "outlet"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,778 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "PumpTransferFilterThroughTestStation",
|
||||||
|
"name": "泵转移+过滤介质测试站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"reaction_mixture",
|
||||||
|
"crude_product",
|
||||||
|
"filter_celite",
|
||||||
|
"column_silica_gel",
|
||||||
|
"filter_C18",
|
||||||
|
"pure_product",
|
||||||
|
"collection_bottle_1",
|
||||||
|
"collection_bottle_2",
|
||||||
|
"collection_bottle_3",
|
||||||
|
"intermediate_vessel_1",
|
||||||
|
"intermediate_vessel_2",
|
||||||
|
"flask_water",
|
||||||
|
"flask_ethanol",
|
||||||
|
"flask_methanol",
|
||||||
|
"flask_ethyl_acetate",
|
||||||
|
"flask_acetone",
|
||||||
|
"flask_hexane",
|
||||||
|
"flask_air",
|
||||||
|
"waste_workup"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"PumpTransferProtocol",
|
||||||
|
"FilterThroughProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "主转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "副转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP2",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 2.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "溶剂分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "样品分配阀",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE2",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reaction_mixture",
|
||||||
|
"name": "反应混合物",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "organic_reaction_mixture",
|
||||||
|
"liquid_volume": 250.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "crude_product",
|
||||||
|
"name": "粗产品",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "crude_organic_compound",
|
||||||
|
"liquid_volume": 150.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "filter_celite",
|
||||||
|
"name": "硅藻土过滤器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 300.0,
|
||||||
|
"filter_type": "celite_pad"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "column_silica_gel",
|
||||||
|
"name": "硅胶柱",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 200.0,
|
||||||
|
"filter_type": "silica_gel_column"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "filter_C18",
|
||||||
|
"name": "C18固相萃取柱",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 100.0,
|
||||||
|
"filter_type": "C18_cartridge"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "pure_product",
|
||||||
|
"name": "纯产品",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_2",
|
||||||
|
"name": "收集瓶2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_3",
|
||||||
|
"name": "收集瓶3",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 550,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "intermediate_vessel_1",
|
||||||
|
"name": "中间容器1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "intermediate_vessel_2",
|
||||||
|
"name": "中间容器2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_water",
|
||||||
|
"name": "蒸馏水瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 900.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethanol",
|
||||||
|
"name": "乙醇瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_methanol",
|
||||||
|
"name": "甲醇瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "methanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethyl_acetate",
|
||||||
|
"name": "乙酸乙酯瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethyl_acetate",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_acetone",
|
||||||
|
"name": "丙酮瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "acetone",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_hexane",
|
||||||
|
"name": "正己烷瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "hexane",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "PumpTransferFilterThroughTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 600,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_water",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_water",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_water": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_ethanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_methanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_methanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_methanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_ethyl_acetate",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethyl_acetate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"flask_ethyl_acetate": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_acetone",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_acetone",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "6",
|
||||||
|
"flask_acetone": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_hexane",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_hexane",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "7",
|
||||||
|
"flask_hexane": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "8",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reaction_mixture",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "reaction_mixture",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"reaction_mixture": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_crude_product",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "crude_product",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"crude_product": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_intermediate1",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "intermediate_vessel_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "4",
|
||||||
|
"intermediate_vessel_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_intermediate2",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "intermediate_vessel_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"intermediate_vessel_2": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_celite",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "filter_celite",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"filter_celite": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_silica_gel",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "column_silica_gel",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "7",
|
||||||
|
"column_silica_gel": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_C18",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "filter_C18",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "8",
|
||||||
|
"filter_C18": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_celite_collection1",
|
||||||
|
"source": "filter_celite",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"filter_celite": "outlet",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_silica_gel_collection2",
|
||||||
|
"source": "column_silica_gel",
|
||||||
|
"target": "collection_bottle_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"column_silica_gel": "outlet",
|
||||||
|
"collection_bottle_2": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_C18_collection3",
|
||||||
|
"source": "filter_C18",
|
||||||
|
"target": "collection_bottle_3",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"filter_C18": "outlet",
|
||||||
|
"collection_bottle_3": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_collection1_pure_product",
|
||||||
|
"source": "collection_bottle_1",
|
||||||
|
"target": "pure_product",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"collection_bottle_1": "outlet",
|
||||||
|
"pure_product": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_collection2_pure_product",
|
||||||
|
"source": "collection_bottle_2",
|
||||||
|
"target": "pure_product",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"collection_bottle_2": "outlet",
|
||||||
|
"pure_product": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_collection3_pure_product",
|
||||||
|
"source": "collection_bottle_3",
|
||||||
|
"target": "pure_product",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"collection_bottle_3": "outlet",
|
||||||
|
"pure_product": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_waste_connection",
|
||||||
|
"source": "pure_product",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"pure_product": "waste_outlet",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,304 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "SimpleProtocolStation",
|
||||||
|
"name": "简单协议工作站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"flask_DMF",
|
||||||
|
"flask_ethyl_acetate",
|
||||||
|
"flask_methanol",
|
||||||
|
"main_reactor",
|
||||||
|
"waste_workup",
|
||||||
|
"collection_bottle_1",
|
||||||
|
"flask_air"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": ["PumpTransferProtocol"]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "转移泵1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL",
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"position": 0.0,
|
||||||
|
"status": "Idle",
|
||||||
|
"valve_position": "0"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "八通阀1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_DMF",
|
||||||
|
"name": "DMF试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "DMF",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethyl_acetate",
|
||||||
|
"name": "乙酸乙酯试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "ethyl_acetate",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_methanol",
|
||||||
|
"name": "甲醇试剂瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "methanol",
|
||||||
|
"liquid_volume": 800.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_workup",
|
||||||
|
"name": "废液处理瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_air",
|
||||||
|
"name": "空气瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump_valve",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_air",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_air",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_air": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_DMF",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_DMF",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_DMF": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_ethyl_acetate",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethyl_acetate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_ethyl_acetate": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_methanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_methanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_methanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_reactor",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"main_reactor": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_waste",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "waste_workup",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "6",
|
||||||
|
"waste_workup": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_collection",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "collection_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "7",
|
||||||
|
"collection_bottle_1": "inlet"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,432 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "RunColumnTestStation",
|
||||||
|
"name": "柱层析测试工作站",
|
||||||
|
"children": [
|
||||||
|
"transfer_pump_1",
|
||||||
|
"multiway_valve_1",
|
||||||
|
"column_1",
|
||||||
|
"flask_sample",
|
||||||
|
"flask_hexane",
|
||||||
|
"flask_ethyl_acetate",
|
||||||
|
"flask_methanol",
|
||||||
|
"column_vessel",
|
||||||
|
"collection_flask_1",
|
||||||
|
"collection_flask_2",
|
||||||
|
"collection_flask_3",
|
||||||
|
"waste_flask",
|
||||||
|
"main_reactor"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": ["RunColumnProtocol", "PumpTransferProtocol"]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "转移泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_PUMP1",
|
||||||
|
"max_volume": 50.0,
|
||||||
|
"transfer_rate": 10.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"position": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "八通阀门",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_VALVE1",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "column_1",
|
||||||
|
"name": "柱层析设备",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_column",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_COLUMN1",
|
||||||
|
"max_flow_rate": 5.0,
|
||||||
|
"column_length": 30.0,
|
||||||
|
"column_diameter": 2.5
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"column_state": "Ready"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_sample",
|
||||||
|
"name": "样品瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 500.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "crude_mixture",
|
||||||
|
"volume": 200.0,
|
||||||
|
"concentration": 70.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_hexane",
|
||||||
|
"name": "正己烷洗脱剂",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "hexane",
|
||||||
|
"volume": 1500.0,
|
||||||
|
"concentration": 99.8
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_ethyl_acetate",
|
||||||
|
"name": "乙酸乙酯洗脱剂",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "ethyl_acetate",
|
||||||
|
"volume": 1500.0,
|
||||||
|
"concentration": 99.5
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_methanol",
|
||||||
|
"name": "甲醇洗脱剂",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "methanol",
|
||||||
|
"volume": 800.0,
|
||||||
|
"concentration": 99.9
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "column_vessel",
|
||||||
|
"name": "柱容器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 300.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_flask_1",
|
||||||
|
"name": "收集瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_flask_2",
|
||||||
|
"name": "收集瓶2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_flask_3",
|
||||||
|
"name": "收集瓶3",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_flask",
|
||||||
|
"name": "废液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 1000,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "RunColumnTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "reaction_mixture",
|
||||||
|
"volume": 300.0,
|
||||||
|
"concentration": 85.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump_valve",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_sample",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_sample",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"flask_sample": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_hexane",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_hexane",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"flask_hexane": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_ethyl_acetate",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_ethyl_acetate",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"flask_ethyl_acetate": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_methanol",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "flask_methanol",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"flask_methanol": "outlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_column_vessel",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "column_vessel",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"column_vessel": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_collection1",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "collection_flask_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "6",
|
||||||
|
"collection_flask_1": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_collection2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "collection_flask_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "7",
|
||||||
|
"collection_flask_2": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve_waste",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "waste_flask",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "8",
|
||||||
|
"waste_flask": "inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_column_device_vessel",
|
||||||
|
"source": "column_1",
|
||||||
|
"target": "column_vessel",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"column_1": "columnin",
|
||||||
|
"column_vessel": "column_port"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_column_collection3",
|
||||||
|
"source": "column_1",
|
||||||
|
"target": "collection_flask_3",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"column_1": "columnout",
|
||||||
|
"collection_flask_3": "column_outlet"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -0,0 +1,141 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "SimpleStirHeatChillTestStation",
|
||||||
|
"name": "搅拌加热测试站",
|
||||||
|
"children": [
|
||||||
|
"stirrer_1",
|
||||||
|
"heatchill_1",
|
||||||
|
"main_reactor",
|
||||||
|
"secondary_reactor"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"StirProtocol",
|
||||||
|
"StartStirProtocol",
|
||||||
|
"StopStirProtocol",
|
||||||
|
"HeatChillProtocol",
|
||||||
|
"HeatChillStartProtocol",
|
||||||
|
"HeatChillStopProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "stirrer_1",
|
||||||
|
"name": "主搅拌器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleStirHeatChillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_stirrer",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_STIRRER1",
|
||||||
|
"max_speed": 1500.0,
|
||||||
|
"min_speed": 50.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "heatchill_1",
|
||||||
|
"name": "主加热冷却器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleStirHeatChillTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_heatchill",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 350,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL_HEATCHILL1",
|
||||||
|
"max_temp": 200.0,
|
||||||
|
"min_temp": -80.0,
|
||||||
|
"max_stir_speed": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleStirHeatChillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"liquid_type": "water",
|
||||||
|
"liquid_volume": 500.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "secondary_reactor",
|
||||||
|
"name": "副反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "SimpleStirHeatChillTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_stirrer1_main_reactor",
|
||||||
|
"source": "stirrer_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"stirrer_1": "stirrer",
|
||||||
|
"main_reactor": "stirrer_port"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_heatchill1_main_reactor",
|
||||||
|
"source": "heatchill_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"heatchill_1": "heatchill",
|
||||||
|
"main_reactor": "heating_jacket"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
36
test/experiments/comprehensive_protocol/checklist.md
Normal file
36
test/experiments/comprehensive_protocol/checklist.md
Normal file
@@ -0,0 +1,36 @@
|
|||||||
|
1. 用到的仪器
|
||||||
|
virtual_multiway_valve(√) 八通阀门
|
||||||
|
virtual_transfer_pump(√) 转移泵
|
||||||
|
virtual_centrifuge() 离心机
|
||||||
|
virtual_rotavap() 旋蒸仪
|
||||||
|
virtual_heatchill() 加热器
|
||||||
|
virtual_stirrer() 搅拌器
|
||||||
|
virtual_solenoid_valve() 电磁阀
|
||||||
|
virtual_vacuum_pump(√) vacuum_pump.mock 真空泵
|
||||||
|
virtual_gas_source(√) 气源
|
||||||
|
virtual_filter() 过滤器
|
||||||
|
virtual_column(√) 层析柱
|
||||||
|
separator() homemade_grbl_conductivity 分液漏斗
|
||||||
|
2. 用到的protocol
|
||||||
|
PumpTransferProtocol: generate_pump_protocol_with_rinsing, (√)
|
||||||
|
这个重复了，删掉CleanProtocol: generate_clean_protocol,
|
||||||
|
SeparateProtocol: generate_separate_protocol, (×)
|
||||||
|
EvaporateProtocol: generate_evaporate_protocol, (√)
|
||||||
|
EvacuateAndRefillProtocol: generate_evacuateandrefill_protocol, (√)
|
||||||
|
CentrifugeProtocol: generate_centrifuge_protocol, (√)
|
||||||
|
AddProtocol: generate_add_protocol, (√)
|
||||||
|
FilterProtocol: generate_filter_protocol, (√)
|
||||||
|
HeatChillProtocol: generate_heat_chill_protocol, (√)
|
||||||
|
HeatChillStartProtocol: generate_heat_chill_start_protocol, (√)
|
||||||
|
HeatChillStopProtocol: generate_heat_chill_stop_protocol, (√)
|
||||||
|
StirProtocol: generate_stir_protocol, (√)
|
||||||
|
StartStirProtocol: generate_start_stir_protocol, (√)
|
||||||
|
StopStirProtocol: generate_stop_stir_protocol, (√)
|
||||||
|
这个重复了，删掉TransferProtocol: generate_transfer_protocol,
|
||||||
|
CleanVesselProtocol: generate_clean_vessel_protocol, (√)
|
||||||
|
DissolveProtocol: generate_dissolve_protocol, (√)
|
||||||
|
FilterThroughProtocol: generate_filter_through_protocol, (√)
|
||||||
|
RunColumnProtocol: generate_run_column_protocol, (×)
|
||||||
|
WashSolidProtocol: generate_wash_solid_protocol, (×)
|
||||||
|
|
||||||
|
上下文体积搜索
|
||||||
@@ -0,0 +1,857 @@
|
|||||||
|
{
|
||||||
|
"nodes": [
|
||||||
|
{
|
||||||
|
"id": "ComprehensiveProtocolStation",
|
||||||
|
"name": "综合协议测试工作站",
|
||||||
|
"children": [
|
||||||
|
"multiway_valve_1",
|
||||||
|
"multiway_valve_2",
|
||||||
|
"transfer_pump_1",
|
||||||
|
"transfer_pump_2",
|
||||||
|
"reagent_bottle_1",
|
||||||
|
"reagent_bottle_2",
|
||||||
|
"reagent_bottle_3",
|
||||||
|
"reagent_bottle_4",
|
||||||
|
"reagent_bottle_5",
|
||||||
|
"centrifuge_1",
|
||||||
|
"rotavap_1",
|
||||||
|
"main_reactor",
|
||||||
|
"heater_1",
|
||||||
|
"stirrer_1",
|
||||||
|
"stirrer_2",
|
||||||
|
"waste_bottle_1",
|
||||||
|
"waste_bottle_2",
|
||||||
|
"solenoid_valve_1",
|
||||||
|
"solenoid_valve_2",
|
||||||
|
"vacuum_pump_1",
|
||||||
|
"gas_source_1",
|
||||||
|
"filter_1",
|
||||||
|
"column_1",
|
||||||
|
"separator_1",
|
||||||
|
"collection_bottle_1",
|
||||||
|
"collection_bottle_2",
|
||||||
|
"collection_bottle_3"
|
||||||
|
],
|
||||||
|
"parent": null,
|
||||||
|
"type": "device",
|
||||||
|
"class": "workstation",
|
||||||
|
"position": {
|
||||||
|
"x": 600,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"protocol_type": [
|
||||||
|
"AddProtocol",
|
||||||
|
"TransferProtocol",
|
||||||
|
"StartStirProtocol",
|
||||||
|
"StopStirProtocol",
|
||||||
|
"StirProtocol",
|
||||||
|
"RunColumnProtocol",
|
||||||
|
"CentrifugeProtocol",
|
||||||
|
"FilterProtocol",
|
||||||
|
"CleanVesselProtocol",
|
||||||
|
"DissolveProtocol",
|
||||||
|
"FilterThroughProtocol",
|
||||||
|
"WashSolidProtocol",
|
||||||
|
"SeparateProtocol",
|
||||||
|
"EvaporateProtocol",
|
||||||
|
"HeatChillProtocol",
|
||||||
|
"HeatChillStartProtocol",
|
||||||
|
"HeatChillStopProtocol",
|
||||||
|
"EvacuateAndRefillProtocol",
|
||||||
|
"PumpTransferProtocol"
|
||||||
|
]
|
||||||
|
},
|
||||||
|
"data": {}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_1",
|
||||||
|
"name": "八通阀门1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"valve_state": "Ready",
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve_2",
|
||||||
|
"name": "八通阀门2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 800,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"valve_state": "Ready",
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_1",
|
||||||
|
"name": "转移泵1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 350,
|
||||||
|
"y": 250,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 10.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"current_volume": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "transfer_pump_2",
|
||||||
|
"name": "转移泵2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_transfer_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 850,
|
||||||
|
"y": 250,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 25.0,
|
||||||
|
"transfer_rate": 10.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"current_volume": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reagent_bottle_1",
|
||||||
|
"name": "试剂瓶1-DMF",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 150,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 1000.0,
|
||||||
|
"reagent": "DMF"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 1000.0,
|
||||||
|
"reagent_name": "DMF"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reagent_bottle_2",
|
||||||
|
"name": "试剂瓶2-乙酸乙酯",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 250,
|
||||||
|
"y": 150,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 1000.0,
|
||||||
|
"reagent": "ethyl_acetate"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 1000.0,
|
||||||
|
"reagent_name": "ethyl_acetate"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reagent_bottle_3",
|
||||||
|
"name": "试剂瓶3-己烷",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 150,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 1000.0,
|
||||||
|
"reagent": "hexane"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 1000.0,
|
||||||
|
"reagent_name": "hexane"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reagent_bottle_4",
|
||||||
|
"name": "试剂瓶4-甲醇",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 150,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 1000.0,
|
||||||
|
"reagent": "methanol"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 1000.0,
|
||||||
|
"reagent_name": "methanol"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "reagent_bottle_5",
|
||||||
|
"name": "试剂瓶5-水",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 950,
|
||||||
|
"y": 150,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 1000.0,
|
||||||
|
"reagent": "water"
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 1000.0,
|
||||||
|
"reagent_name": "water"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "centrifuge_1",
|
||||||
|
"name": "离心机",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_centrifuge",
|
||||||
|
"position": {
|
||||||
|
"x": 200,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_speed": 15000.0,
|
||||||
|
"max_temp": 40.0,
|
||||||
|
"min_temp": 4.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_speed": 0.0,
|
||||||
|
"status": "Idle"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "rotavap_1",
|
||||||
|
"name": "旋转蒸发仪",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_rotavap",
|
||||||
|
"position": {
|
||||||
|
"x": 300,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_temp": 180.0,
|
||||||
|
"max_rotation_speed": 280.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"current_temp": 25.0,
|
||||||
|
"rotation_speed": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "main_reactor",
|
||||||
|
"name": "主反应器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 400,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 500.0,
|
||||||
|
"max_temp": 200.0,
|
||||||
|
"min_temp": -20.0,
|
||||||
|
"has_stirrer": true,
|
||||||
|
"has_heater": true
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 0.0,
|
||||||
|
"current_temp": 25.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "heater_1",
|
||||||
|
"name": "加热器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_heatchill",
|
||||||
|
"position": {
|
||||||
|
"x": 450,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_temp": 200.0,
|
||||||
|
"min_temp": -20.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"current_temp": 25.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "stirrer_1",
|
||||||
|
"name": "搅拌器1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_stirrer",
|
||||||
|
"position": {
|
||||||
|
"x": 350,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_speed": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"current_speed": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "stirrer_2",
|
||||||
|
"name": "搅拌器2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_stirrer",
|
||||||
|
"position": {
|
||||||
|
"x": 351,
|
||||||
|
"y": 451,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_speed": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"current_speed": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_bottle_1",
|
||||||
|
"name": "废液瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 500,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "waste_bottle_2",
|
||||||
|
"name": "废液瓶2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 1100,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 2000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "solenoid_valve_1",
|
||||||
|
"name": "电磁阀1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_solenoid_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"voltage": 12.0,
|
||||||
|
"response_time": 0.1
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"valve_state": "Closed",
|
||||||
|
"is_open": false
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "solenoid_valve_2",
|
||||||
|
"name": "电磁阀2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_solenoid_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 700,
|
||||||
|
"y": 150,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"voltage": 12.0,
|
||||||
|
"response_time": 0.1
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"valve_state": "Closed",
|
||||||
|
"is_open": false
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "vacuum_pump_1",
|
||||||
|
"name": "真空泵",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_vacuum_pump",
|
||||||
|
"position": {
|
||||||
|
"x": 650,
|
||||||
|
"y": 200,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_vacuum": 0.1,
|
||||||
|
"pump_rate": 50.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Off",
|
||||||
|
"current_vacuum": 1.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "gas_source_1",
|
||||||
|
"name": "气源",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_gas_source",
|
||||||
|
"position": {
|
||||||
|
"x": 650,
|
||||||
|
"y": 150,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {},
|
||||||
|
"data": {
|
||||||
|
"gas_type": "nitrogen",
|
||||||
|
"max_pressure": 5.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "filter_1",
|
||||||
|
"name": "过滤器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_filter",
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"filter_type": "membrane",
|
||||||
|
"max_pressure": 5.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Ready",
|
||||||
|
"pressure": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "column_1",
|
||||||
|
"name": "洗脱柱",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_column",
|
||||||
|
"position": {
|
||||||
|
"x": 950,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"column_type": "silica_gel",
|
||||||
|
"length": 30.0,
|
||||||
|
"diameter": 2.5
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Ready",
|
||||||
|
"loaded": false
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "separator_1",
|
||||||
|
"name": "分液器",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_separator",
|
||||||
|
"position": {
|
||||||
|
"x": 1000,
|
||||||
|
"y": 450,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 250.0,
|
||||||
|
"has_phases": true
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Ready",
|
||||||
|
"phase_separation": false
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_1",
|
||||||
|
"name": "接收瓶1",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 900,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 250.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_2",
|
||||||
|
"name": "接收瓶2",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 950,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 250.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 0.0
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "collection_bottle_3",
|
||||||
|
"name": "接收瓶3",
|
||||||
|
"children": [],
|
||||||
|
"parent": "ComprehensiveProtocolStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": "container",
|
||||||
|
"position": {
|
||||||
|
"x": 1050,
|
||||||
|
"y": 500,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"volume": 250.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"current_volume": 0.0
|
||||||
|
}
|
||||||
|
}
|
||||||
|
],
|
||||||
|
"links": [
|
||||||
|
{
|
||||||
|
"id": "link_pump1_valve1",
|
||||||
|
"source": "transfer_pump_1",
|
||||||
|
"target": "multiway_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_1": "transferpump",
|
||||||
|
"multiway_valve_1": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_reagent1",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "reagent_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "1",
|
||||||
|
"reagent_bottle_1": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_reagent2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "reagent_bottle_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "2",
|
||||||
|
"reagent_bottle_2": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_reagent3",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "reagent_bottle_3",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "3",
|
||||||
|
"reagent_bottle_3": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_centrifuge",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "centrifuge_1",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "4",
|
||||||
|
"centrifuge_1": "centrifuge"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_rotavap",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "rotavap_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "5",
|
||||||
|
"rotavap_1": "sample_in"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_reactor",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "6",
|
||||||
|
"main_reactor": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_waste1",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "waste_bottle_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "7",
|
||||||
|
"waste_bottle_1": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve1_valve2",
|
||||||
|
"source": "multiway_valve_1",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_1": "8",
|
||||||
|
"multiway_valve_2": "1"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_pump2_valve2",
|
||||||
|
"source": "transfer_pump_2",
|
||||||
|
"target": "multiway_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump_2": "transferpump",
|
||||||
|
"multiway_valve_2": "transferpump"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_solenoid1",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "solenoid_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "2",
|
||||||
|
"solenoid_valve_1": "in"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_vacuum_solenoid1",
|
||||||
|
"source": "vacuum_pump_1",
|
||||||
|
"target": "solenoid_valve_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"vacuum_pump_1": "vacuumpump",
|
||||||
|
"solenoid_valve_1": "out"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_solenoid2",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "solenoid_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "3",
|
||||||
|
"solenoid_valve_2": "in"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_gas_solenoid2",
|
||||||
|
"source": "gas_source_1",
|
||||||
|
"target": "solenoid_valve_2",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"gas_source_1": "gassource",
|
||||||
|
"solenoid_valve_2": "out"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_filter",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "filter_1",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "4",
|
||||||
|
"filter_1": "filter_in"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_column",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "column_1",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "5",
|
||||||
|
"column_1": "columnin"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_column_collection2",
|
||||||
|
"source": "column_1",
|
||||||
|
"target": "collection_bottle_2",
|
||||||
|
"type": "transport",
|
||||||
|
"port": {
|
||||||
|
"column_1": "columnout",
|
||||||
|
"collection_bottle_2": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_separator",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "separator_1",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "6",
|
||||||
|
"separator_1": "separator_in"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_separator_collection3",
|
||||||
|
"source": "separator_1",
|
||||||
|
"target": "collection_bottle_3",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"separator_1": "bottom_phase_out",
|
||||||
|
"collection_bottle_3": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reagent4",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "reagent_bottle_4",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "7",
|
||||||
|
"reagent_bottle_4": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "link_valve2_reagent5",
|
||||||
|
"source": "multiway_valve_2",
|
||||||
|
"target": "reagent_bottle_5",
|
||||||
|
"type": "fluid",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve_2": "8",
|
||||||
|
"reagent_bottle_5": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "mech_stirrer_reactor",
|
||||||
|
"source": "stirrer_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"stirrer_1": "stirrer",
|
||||||
|
"main_reactor": "bind"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "thermal_heater_reactor",
|
||||||
|
"source": "heater_1",
|
||||||
|
"target": "main_reactor",
|
||||||
|
"type": "mechanical",
|
||||||
|
"port": {
|
||||||
|
"heater_1": "heatchill",
|
||||||
|
"main_reactor": "bind"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
@@ -4,58 +4,83 @@
|
|||||||
"id": "AddTestStation",
|
"id": "AddTestStation",
|
||||||
"name": "添加试剂测试工作站",
|
"name": "添加试剂测试工作站",
|
||||||
"children": [
|
"children": [
|
||||||
"pump_add",
|
"transfer_pump",
|
||||||
"flask_1",
|
"multiway_valve",
|
||||||
"flask_2",
|
|
||||||
"flask_3",
|
|
||||||
"flask_4",
|
|
||||||
"reactor",
|
|
||||||
"stirrer",
|
"stirrer",
|
||||||
"flask_air"
|
"flask_reagent1",
|
||||||
|
"flask_reagent2",
|
||||||
|
"flask_reagent3",
|
||||||
|
"flask_reagent4",
|
||||||
|
"reactor",
|
||||||
|
"flask_waste",
|
||||||
|
"flask_rinsing",
|
||||||
|
"flask_buffer"
|
||||||
],
|
],
|
||||||
"parent": null,
|
"parent": null,
|
||||||
"type": "device",
|
"type": "device",
|
||||||
"class": "workstation",
|
"class": "workstation",
|
||||||
"position": {
|
"position": {
|
||||||
"x": 620.6111111111111,
|
"x": 620,
|
||||||
"y": 171,
|
"y": 171,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
"protocol_type": ["AddProtocol", "PumpTransferProtocol", "CleanProtocol"]
|
"protocol_type": ["AddProtocol", "TransferProtocol", "StartStirProtocol", "StopStirProtocol"]
|
||||||
},
|
},
|
||||||
"data": {}
|
"data": {}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"id": "pump_add",
|
"id": "transfer_pump",
|
||||||
"name": "pump_add",
|
"name": "注射器泵",
|
||||||
"children": [],
|
"children": [],
|
||||||
"parent": "AddTestStation",
|
"parent": "AddTestStation",
|
||||||
"type": "device",
|
"type": "device",
|
||||||
"class": "virtual_pump",
|
"class": "virtual_transfer_pump",
|
||||||
"position": {
|
"position": {
|
||||||
"x": 520.6111111111111,
|
"x": 520,
|
||||||
"y": 300,
|
"y": 300,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
"port": "VIRTUAL",
|
"port": "VIRTUAL",
|
||||||
"max_volume": 25.0
|
"max_volume": 50.0,
|
||||||
|
"transfer_rate": 5.0
|
||||||
},
|
},
|
||||||
"data": {
|
"data": {
|
||||||
"status": "Idle"
|
"status": "Idle"
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
|
{
|
||||||
|
"id": "multiway_valve",
|
||||||
|
"name": "八通阀门",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddTestStation",
|
||||||
|
"type": "device",
|
||||||
|
"class": "virtual_multiway_valve",
|
||||||
|
"position": {
|
||||||
|
"x": 420,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"port": "VIRTUAL",
|
||||||
|
"positions": 8
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"status": "Idle",
|
||||||
|
"current_position": 1
|
||||||
|
}
|
||||||
|
},
|
||||||
{
|
{
|
||||||
"id": "stirrer",
|
"id": "stirrer",
|
||||||
"name": "stirrer",
|
"name": "搅拌器",
|
||||||
"children": [],
|
"children": [],
|
||||||
"parent": "AddTestStation",
|
"parent": "AddTestStation",
|
||||||
"type": "device",
|
"type": "device",
|
||||||
"class": "virtual_stirrer",
|
"class": "virtual_stirrer",
|
||||||
"position": {
|
"position": {
|
||||||
"x": 698.1111111111111,
|
"x": 720,
|
||||||
"y": 478,
|
"y": 450,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
@@ -68,110 +93,115 @@
|
|||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"id": "flask_1",
|
"id": "flask_reagent1",
|
||||||
"name": "通用试剂瓶1",
|
"name": "试剂瓶1 (甲醇)",
|
||||||
"children": [],
|
"children": [],
|
||||||
"parent": "AddTestStation",
|
"parent": "AddTestStation",
|
||||||
"type": "container",
|
"type": "container",
|
||||||
"class": null,
|
"class": null,
|
||||||
"position": {
|
"position": {
|
||||||
"x": 100,
|
"x": 100,
|
||||||
"y": 428,
|
"y": 400,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
"max_volume": 2000.0
|
"max_volume": 1000.0
|
||||||
},
|
},
|
||||||
"data": {
|
"data": {
|
||||||
"liquid": []
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "甲醇",
|
||||||
|
"volume": 800.0,
|
||||||
|
"concentration": "99.9%"
|
||||||
|
}
|
||||||
|
]
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"id": "flask_2",
|
"id": "flask_reagent2",
|
||||||
"name": "通用试剂瓶2",
|
"name": "试剂瓶2 (乙醇)",
|
||||||
"children": [],
|
"children": [],
|
||||||
"parent": "AddTestStation",
|
"parent": "AddTestStation",
|
||||||
"type": "container",
|
"type": "container",
|
||||||
"class": null,
|
"class": null,
|
||||||
"position": {
|
"position": {
|
||||||
"x": 250,
|
"x": 180,
|
||||||
"y": 428,
|
"y": 400,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
"max_volume": 2000.0
|
"max_volume": 1000.0
|
||||||
},
|
},
|
||||||
"data": {
|
"data": {
|
||||||
"liquid": []
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "乙醇",
|
||||||
|
"volume": 750.0,
|
||||||
|
"concentration": "95%"
|
||||||
|
}
|
||||||
|
]
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"id": "flask_3",
|
"id": "flask_reagent3",
|
||||||
"name": "通用试剂瓶3",
|
"name": "试剂瓶3 (丙酮)",
|
||||||
"children": [],
|
"children": [],
|
||||||
"parent": "AddTestStation",
|
"parent": "AddTestStation",
|
||||||
"type": "container",
|
"type": "container",
|
||||||
"class": null,
|
"class": null,
|
||||||
"position": {
|
"position": {
|
||||||
"x": 400,
|
"x": 260,
|
||||||
"y": 428,
|
"y": 400,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
"max_volume": 2000.0
|
"max_volume": 1000.0
|
||||||
},
|
},
|
||||||
"data": {
|
"data": {
|
||||||
"liquid": []
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "丙酮",
|
||||||
|
"volume": 900.0,
|
||||||
|
"concentration": "99.5%"
|
||||||
|
}
|
||||||
|
]
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"id": "flask_4",
|
"id": "flask_reagent4",
|
||||||
"name": "通用试剂瓶4",
|
"name": "试剂瓶4 (二氯甲烷)",
|
||||||
"children": [],
|
"children": [],
|
||||||
"parent": "AddTestStation",
|
"parent": "AddTestStation",
|
||||||
"type": "container",
|
"type": "container",
|
||||||
"class": null,
|
"class": null,
|
||||||
"position": {
|
"position": {
|
||||||
"x": 550,
|
"x": 340,
|
||||||
"y": 428,
|
"y": 400,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
"max_volume": 2000.0
|
"max_volume": 1000.0
|
||||||
},
|
},
|
||||||
"data": {
|
"data": {
|
||||||
"liquid": []
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "二氯甲烷",
|
||||||
|
"volume": 850.0,
|
||||||
|
"concentration": "99.8%"
|
||||||
|
}
|
||||||
|
]
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"id": "reactor",
|
"id": "reactor",
|
||||||
"name": "reactor",
|
"name": "反应器",
|
||||||
"children": [],
|
"children": [],
|
||||||
"parent": "AddTestStation",
|
"parent": "AddTestStation",
|
||||||
"type": "container",
|
"type": "container",
|
||||||
"class": null,
|
"class": null,
|
||||||
"position": {
|
"position": {
|
||||||
"x": 698.1111111111111,
|
"x": 720,
|
||||||
"y": 428,
|
"y": 400,
|
||||||
"z": 0
|
|
||||||
},
|
|
||||||
"config": {
|
|
||||||
"max_volume": 5000.0
|
|
||||||
},
|
|
||||||
"data": {
|
|
||||||
"liquid": []
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"id": "flask_air",
|
|
||||||
"name": "flask_air",
|
|
||||||
"children": [],
|
|
||||||
"parent": "AddTestStation",
|
|
||||||
"type": "container",
|
|
||||||
"class": null,
|
|
||||||
"position": {
|
|
||||||
"x": 800,
|
|
||||||
"y": 300,
|
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
@@ -180,70 +210,166 @@
|
|||||||
"data": {
|
"data": {
|
||||||
"liquid": []
|
"liquid": []
|
||||||
}
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_waste",
|
||||||
|
"name": "废液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 850,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 3000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": []
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_rinsing",
|
||||||
|
"name": "冲洗液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 950,
|
||||||
|
"y": 300,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "去离子水",
|
||||||
|
"volume": 800.0,
|
||||||
|
"concentration": "纯净"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"id": "flask_buffer",
|
||||||
|
"name": "缓冲液瓶",
|
||||||
|
"children": [],
|
||||||
|
"parent": "AddTestStation",
|
||||||
|
"type": "container",
|
||||||
|
"class": null,
|
||||||
|
"position": {
|
||||||
|
"x": 950,
|
||||||
|
"y": 400,
|
||||||
|
"z": 0
|
||||||
|
},
|
||||||
|
"config": {
|
||||||
|
"max_volume": 1000.0
|
||||||
|
},
|
||||||
|
"data": {
|
||||||
|
"liquid": [
|
||||||
|
{
|
||||||
|
"name": "磷酸盐缓冲液",
|
||||||
|
"volume": 700.0,
|
||||||
|
"concentration": "0.1M, pH 7.4"
|
||||||
|
}
|
||||||
|
]
|
||||||
|
}
|
||||||
}
|
}
|
||||||
],
|
],
|
||||||
"links": [
|
"links": [
|
||||||
{
|
{
|
||||||
"source": "stirrer",
|
"source": "transfer_pump",
|
||||||
|
"target": "multiway_valve",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"transfer_pump": "syringe-port",
|
||||||
|
"multiway_valve": "multiway-valve-inlet"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "multiway_valve",
|
||||||
|
"target": "flask_reagent1",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve": "multiway-valve-port-1",
|
||||||
|
"flask_reagent1": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "multiway_valve",
|
||||||
|
"target": "flask_reagent2",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve": "multiway-valve-port-2",
|
||||||
|
"flask_reagent2": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "multiway_valve",
|
||||||
|
"target": "flask_reagent3",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve": "multiway-valve-port-3",
|
||||||
|
"flask_reagent3": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "multiway_valve",
|
||||||
|
"target": "flask_reagent4",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve": "multiway-valve-port-4",
|
||||||
|
"flask_reagent4": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "multiway_valve",
|
||||||
"target": "reactor",
|
"target": "reactor",
|
||||||
"type": "physical",
|
"type": "physical",
|
||||||
"port": {
|
"port": {
|
||||||
"stirrer": "top",
|
"multiway_valve": "multiway-valve-port-5",
|
||||||
"reactor": "bottom"
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"source": "pump_add",
|
|
||||||
"target": "flask_1",
|
|
||||||
"type": "physical",
|
|
||||||
"port": {
|
|
||||||
"pump_add": "outlet",
|
|
||||||
"flask_1": "top"
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"source": "pump_add",
|
|
||||||
"target": "flask_2",
|
|
||||||
"type": "physical",
|
|
||||||
"port": {
|
|
||||||
"pump_add": "inlet",
|
|
||||||
"flask_2": "top"
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"source": "pump_add",
|
|
||||||
"target": "flask_3",
|
|
||||||
"type": "physical",
|
|
||||||
"port": {
|
|
||||||
"pump_add": "inlet",
|
|
||||||
"flask_3": "top"
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"source": "pump_add",
|
|
||||||
"target": "flask_4",
|
|
||||||
"type": "physical",
|
|
||||||
"port": {
|
|
||||||
"pump_add": "inlet",
|
|
||||||
"flask_4": "top"
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"source": "pump_add",
|
|
||||||
"target": "reactor",
|
|
||||||
"type": "physical",
|
|
||||||
"port": {
|
|
||||||
"pump_add": "outlet",
|
|
||||||
"reactor": "top"
|
"reactor": "top"
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"source": "pump_add",
|
"source": "multiway_valve",
|
||||||
"target": "flask_air",
|
"target": "flask_waste",
|
||||||
"type": "physical",
|
"type": "physical",
|
||||||
"port": {
|
"port": {
|
||||||
"pump_add": "inlet",
|
"multiway_valve": "multiway-valve-port-6",
|
||||||
"flask_air": "top"
|
"flask_waste": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "multiway_valve",
|
||||||
|
"target": "flask_rinsing",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve": "multiway-valve-port-7",
|
||||||
|
"flask_rinsing": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "multiway_valve",
|
||||||
|
"target": "flask_buffer",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"multiway_valve": "multiway-valve-port-8",
|
||||||
|
"flask_buffer": "top"
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"source": "stirrer",
|
||||||
|
"target": "reactor",
|
||||||
|
"type": "physical",
|
||||||
|
"port": {
|
||||||
|
"stirrer": "stirrer-vessel",
|
||||||
|
"reactor": "bottom"
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
]
|
]
|
||||||
|
|||||||
@@ -30,14 +30,17 @@
|
|||||||
"children": [],
|
"children": [],
|
||||||
"parent": "ReactorX",
|
"parent": "ReactorX",
|
||||||
"type": "container",
|
"type": "container",
|
||||||
"class": null,
|
"class": "container",
|
||||||
"position": {
|
"position": {
|
||||||
"x": 698.1111111111111,
|
"x": 698.1111111111111,
|
||||||
"y": 428,
|
"y": 428,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
"config": {
|
"config": {
|
||||||
"max_volume": 5000.0
|
"max_volume": 5000.0,
|
||||||
|
"size_x": 200.0,
|
||||||
|
"size_y": 200.0,
|
||||||
|
"size_z": 200.0
|
||||||
},
|
},
|
||||||
"data": {
|
"data": {
|
||||||
"liquid": [
|
"liquid": [
|
||||||
@@ -71,7 +74,7 @@
|
|||||||
"type": "device",
|
"type": "device",
|
||||||
"class": "solenoid_valve.mock",
|
"class": "solenoid_valve.mock",
|
||||||
"position": {
|
"position": {
|
||||||
"x": 620.6111111111111,
|
"x": 780,
|
||||||
"y": 171,
|
"y": 171,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
@@ -89,7 +92,7 @@
|
|||||||
"type": "device",
|
"type": "device",
|
||||||
"class": "vacuum_pump.mock",
|
"class": "vacuum_pump.mock",
|
||||||
"position": {
|
"position": {
|
||||||
"x": 620.6111111111111,
|
"x": 500,
|
||||||
"y": 171,
|
"y": 171,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
@@ -107,7 +110,7 @@
|
|||||||
"type": "device",
|
"type": "device",
|
||||||
"class": "gas_source.mock",
|
"class": "gas_source.mock",
|
||||||
"position": {
|
"position": {
|
||||||
"x": 620.6111111111111,
|
"x": 900,
|
||||||
"y": 171,
|
"y": 171,
|
||||||
"z": 0
|
"z": 0
|
||||||
},
|
},
|
||||||
@@ -119,39 +122,39 @@
|
|||||||
],
|
],
|
||||||
"links": [
|
"links": [
|
||||||
{
|
{
|
||||||
"source": "reactor",
|
"source": "vacuum_valve",
|
||||||
"target": "vacuum_valve",
|
"target": "reactor",
|
||||||
"type": "physical",
|
"type": "fluid",
|
||||||
"port": {
|
"port": {
|
||||||
"reactor": "top",
|
"reactor": "top",
|
||||||
"vacuum_valve": "1"
|
"vacuum_valve": "out"
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"source": "reactor",
|
"source": "gas_valve",
|
||||||
"target": "gas_valve",
|
"target": "reactor",
|
||||||
"type": "physical",
|
"type": "fluid",
|
||||||
"port": {
|
"port": {
|
||||||
"reactor": "top",
|
"reactor": "top",
|
||||||
"gas_valve": "1"
|
"gas_valve": "out"
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"source": "vacuum_pump",
|
"source": "vacuum_pump",
|
||||||
"target": "vacuum_valve",
|
"target": "vacuum_valve",
|
||||||
"type": "physical",
|
"type": "fluid",
|
||||||
"port": {
|
"port": {
|
||||||
"vacuum_pump": "out",
|
"vacuum_pump": "out",
|
||||||
"vacuum_valve": "0"
|
"vacuum_valve": "in"
|
||||||
}
|
}
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"source": "gas_source",
|
"source": "gas_source",
|
||||||
"target": "gas_valve",
|
"target": "gas_valve",
|
||||||
"type": "physical",
|
"type": "fluid",
|
||||||
"port": {
|
"port": {
|
||||||
"gas_source": "out",
|
"gas_source": "out",
|
||||||
"gas_valve": "0"
|
"gas_valve": "in"
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
]
|
]
|
||||||
|
|||||||
@@ -8,6 +8,7 @@ def start_backend(
|
|||||||
backend: str,
|
backend: str,
|
||||||
devices_config: dict = {},
|
devices_config: dict = {},
|
||||||
resources_config: list = [],
|
resources_config: list = [],
|
||||||
|
resources_edge_config: list = [],
|
||||||
graph=None,
|
graph=None,
|
||||||
controllers_config: dict = {},
|
controllers_config: dict = {},
|
||||||
bridges=[],
|
bridges=[],
|
||||||
@@ -31,7 +32,7 @@ def start_backend(
|
|||||||
|
|
||||||
backend_thread = threading.Thread(
|
backend_thread = threading.Thread(
|
||||||
target=main if not without_host else slave,
|
target=main if not without_host else slave,
|
||||||
args=(devices_config, resources_config, graph, controllers_config, bridges, visual, resources_mesh_config),
|
args=(devices_config, resources_config, resources_edge_config, graph, controllers_config, bridges, visual, resources_mesh_config),
|
||||||
name="backend_thread",
|
name="backend_thread",
|
||||||
daemon=True,
|
daemon=True,
|
||||||
)
|
)
|
||||||
|
|||||||
@@ -10,7 +10,7 @@ from copy import deepcopy
|
|||||||
|
|
||||||
import yaml
|
import yaml
|
||||||
|
|
||||||
from unilabos.resources.graphio import tree_to_list
|
from unilabos.resources.graphio import tree_to_list, modify_to_backend_format
|
||||||
|
|
||||||
# 首先添加项目根目录到路径
|
# 首先添加项目根目录到路径
|
||||||
current_dir = os.path.dirname(os.path.abspath(__file__))
|
current_dir = os.path.dirname(os.path.abspath(__file__))
|
||||||
@@ -22,6 +22,21 @@ from unilabos.config.config import load_config, BasicConfig, _update_config_from
|
|||||||
from unilabos.utils.banner_print import print_status, print_unilab_banner
|
from unilabos.utils.banner_print import print_status, print_unilab_banner
|
||||||
|
|
||||||
|
|
||||||
|
def load_config_from_file(config_path):
|
||||||
|
if config_path is None:
|
||||||
|
config_path = os.environ.get("UNILABOS.BASICCONFIG.CONFIG_PATH", None)
|
||||||
|
if config_path:
|
||||||
|
if not os.path.exists(config_path):
|
||||||
|
print_status(f"配置文件 {config_path} 不存在", "error")
|
||||||
|
elif not config_path.endswith(".py"):
|
||||||
|
print_status(f"配置文件 {config_path} 不是Python文件，必须以.py结尾", "error")
|
||||||
|
else:
|
||||||
|
load_config(config_path)
|
||||||
|
else:
|
||||||
|
print_status(f"启动 UniLab-OS时，配置文件参数未正确传入 --config '{config_path}' 尝试本地配置...", "warning")
|
||||||
|
load_config(config_path)
|
||||||
|
|
||||||
|
|
||||||
def parse_args():
|
def parse_args():
|
||||||
"""解析命令行参数"""
|
"""解析命令行参数"""
|
||||||
parser = argparse.ArgumentParser(description="Start Uni-Lab Edge server.")
|
parser = argparse.ArgumentParser(description="Start Uni-Lab Edge server.")
|
||||||
@@ -58,6 +73,11 @@ def parse_args():
|
|||||||
action="store_true",
|
action="store_true",
|
||||||
help="Slave模式下跳过等待host服务",
|
help="Slave模式下跳过等待host服务",
|
||||||
)
|
)
|
||||||
|
parser.add_argument(
|
||||||
|
"--upload_registry",
|
||||||
|
action="store_true",
|
||||||
|
help="启动unilab时同时报送注册表信息",
|
||||||
|
)
|
||||||
parser.add_argument(
|
parser.add_argument(
|
||||||
"--config",
|
"--config",
|
||||||
type=str,
|
type=str,
|
||||||
@@ -97,22 +117,12 @@ def main():
|
|||||||
|
|
||||||
# 加载配置文件，优先加载config，然后从env读取
|
# 加载配置文件，优先加载config，然后从env读取
|
||||||
config_path = args_dict.get("config")
|
config_path = args_dict.get("config")
|
||||||
if config_path is None:
|
load_config_from_file(config_path)
|
||||||
config_path = os.environ.get("UNILABOS.BASICCONFIG.CONFIG_PATH", None)
|
|
||||||
if config_path:
|
|
||||||
if not os.path.exists(config_path):
|
|
||||||
print_status(f"配置文件 {config_path} 不存在", "error")
|
|
||||||
elif not config_path.endswith(".py"):
|
|
||||||
print_status(f"配置文件 {config_path} 不是Python文件，必须以.py结尾", "error")
|
|
||||||
else:
|
|
||||||
load_config(config_path)
|
|
||||||
else:
|
|
||||||
print_status(f"启动 UniLab-OS时，配置文件参数未正确传入 --config '{config_path}' 尝试本地配置...", "warning")
|
|
||||||
load_config(config_path)
|
|
||||||
|
|
||||||
# 设置BasicConfig参数
|
# 设置BasicConfig参数
|
||||||
BasicConfig.is_host_mode = not args_dict.get("without_host", False)
|
BasicConfig.is_host_mode = not args_dict.get("without_host", False)
|
||||||
BasicConfig.slave_no_host = args_dict.get("slave_no_host", False)
|
BasicConfig.slave_no_host = args_dict.get("slave_no_host", False)
|
||||||
|
BasicConfig.upload_registry = args_dict.get("upload_registry", False)
|
||||||
machine_name = os.popen("hostname").read().strip()
|
machine_name = os.popen("hostname").read().strip()
|
||||||
machine_name = "".join([c if c.isalnum() or c == "_" else "_" for c in machine_name])
|
machine_name = "".join([c if c.isalnum() or c == "_" else "_" for c in machine_name])
|
||||||
BasicConfig.machine_name = machine_name
|
BasicConfig.machine_name = machine_name
|
||||||
@@ -136,15 +146,16 @@ def main():
|
|||||||
|
|
||||||
# 注册表
|
# 注册表
|
||||||
build_registry(args_dict["registry_path"])
|
build_registry(args_dict["registry_path"])
|
||||||
|
resource_edge_info = []
|
||||||
devices_and_resources = None
|
devices_and_resources = None
|
||||||
if args_dict["graph"] is not None:
|
if args_dict["graph"] is not None:
|
||||||
import unilabos.resources.graphio as graph_res
|
import unilabos.resources.graphio as graph_res
|
||||||
graph_res.physical_setup_graph = (
|
if args_dict["graph"].endswith(".json"):
|
||||||
read_node_link_json(args_dict["graph"])
|
graph, data = read_node_link_json(args_dict["graph"])
|
||||||
if args_dict["graph"].endswith(".json")
|
else:
|
||||||
else read_graphml(args_dict["graph"])
|
graph, data = read_graphml(args_dict["graph"])
|
||||||
)
|
graph_res.physical_setup_graph = graph
|
||||||
|
resource_edge_info = modify_to_backend_format(data["links"])
|
||||||
devices_and_resources = dict_from_graph(graph_res.physical_setup_graph)
|
devices_and_resources = dict_from_graph(graph_res.physical_setup_graph)
|
||||||
# args_dict["resources_config"] = initialize_resources(list(deepcopy(devices_and_resources).values()))
|
# args_dict["resources_config"] = initialize_resources(list(deepcopy(devices_and_resources).values()))
|
||||||
args_dict["resources_config"] = list(devices_and_resources.values())
|
args_dict["resources_config"] = list(devices_and_resources.values())
|
||||||
@@ -185,6 +196,7 @@ def main():
|
|||||||
signal.signal(signal.SIGTERM, _exit)
|
signal.signal(signal.SIGTERM, _exit)
|
||||||
mqtt_client.start()
|
mqtt_client.start()
|
||||||
args_dict["resources_mesh_config"] = {}
|
args_dict["resources_mesh_config"] = {}
|
||||||
|
args_dict["resources_edge_config"] = resource_edge_info
|
||||||
# web visiualize 2D
|
# web visiualize 2D
|
||||||
if args_dict["visual"] != "disable":
|
if args_dict["visual"] != "disable":
|
||||||
enable_rviz = args_dict["visual"] == "rviz"
|
enable_rviz = args_dict["visual"] == "rviz"
|
||||||
|
|||||||
@@ -172,13 +172,14 @@ class MQTTClient:
|
|||||||
jobdata = {"job_id": job_id, "data": feedback_data, "status": status, "return_info": return_info}
|
jobdata = {"job_id": job_id, "data": feedback_data, "status": status, "return_info": return_info}
|
||||||
self.client.publish(f"labs/{MQConfig.lab_id}/job/list/", json.dumps(jobdata), qos=2)
|
self.client.publish(f"labs/{MQConfig.lab_id}/job/list/", json.dumps(jobdata), qos=2)
|
||||||
|
|
||||||
def publish_registry(self, device_id: str, device_info: dict):
|
def publish_registry(self, device_id: str, device_info: dict, print_debug: bool = True):
|
||||||
if self.mqtt_disable:
|
if self.mqtt_disable:
|
||||||
return
|
return
|
||||||
address = f"labs/{MQConfig.lab_id}/registry/"
|
address = f"labs/{MQConfig.lab_id}/registry/"
|
||||||
registry_data = json.dumps({device_id: device_info}, ensure_ascii=False, cls=TypeEncoder)
|
registry_data = json.dumps({device_id: device_info}, ensure_ascii=False, cls=TypeEncoder)
|
||||||
self.client.publish(address, registry_data, qos=2)
|
self.client.publish(address, registry_data, qos=2)
|
||||||
logger.debug(f"Registry data published: address: {address}, {registry_data}")
|
if print_debug:
|
||||||
|
logger.debug(f"Registry data published: address: {address}, {registry_data}")
|
||||||
|
|
||||||
def publish_actions(self, action_id: str, action_info: dict):
|
def publish_actions(self, action_id: str, action_info: dict):
|
||||||
if self.mqtt_disable:
|
if self.mqtt_disable:
|
||||||
|
|||||||
67
unilabos/app/register.py
Normal file
67
unilabos/app/register.py
Normal file
@@ -0,0 +1,67 @@
|
|||||||
|
import argparse
|
||||||
|
import time
|
||||||
|
|
||||||
|
from unilabos.registry.registry import build_registry
|
||||||
|
|
||||||
|
from unilabos.app.main import load_config_from_file
|
||||||
|
from unilabos.utils.log import logger
|
||||||
|
|
||||||
|
|
||||||
|
def register_devices_and_resources(mqtt_client, lab_registry):
|
||||||
|
"""
|
||||||
|
注册设备和资源到 MQTT
|
||||||
|
"""
|
||||||
|
logger.info("[UniLab Register] 开始注册设备和资源...")
|
||||||
|
|
||||||
|
# 注册设备信息
|
||||||
|
for device_info in lab_registry.obtain_registry_device_info():
|
||||||
|
mqtt_client.publish_registry(device_info["id"], device_info, False)
|
||||||
|
logger.debug(f"[UniLab Register] 注册设备: {device_info['id']}")
|
||||||
|
|
||||||
|
# 注册资源信息
|
||||||
|
for resource_info in lab_registry.obtain_registry_resource_info():
|
||||||
|
mqtt_client.publish_registry(resource_info["id"], resource_info, False)
|
||||||
|
logger.debug(f"[UniLab Register] 注册资源: {resource_info['id']}")
|
||||||
|
|
||||||
|
time.sleep(10)
|
||||||
|
|
||||||
|
logger.info("[UniLab Register] 设备和资源注册完成.")
|
||||||
|
|
||||||
|
|
||||||
|
def main():
|
||||||
|
"""
|
||||||
|
命令行入口函数
|
||||||
|
"""
|
||||||
|
parser = argparse.ArgumentParser(description="注册设备和资源到 MQTT")
|
||||||
|
parser.add_argument(
|
||||||
|
"--registry_path",
|
||||||
|
type=str,
|
||||||
|
default=None,
|
||||||
|
action="append",
|
||||||
|
help="注册表路径",
|
||||||
|
)
|
||||||
|
parser.add_argument(
|
||||||
|
"--config",
|
||||||
|
type=str,
|
||||||
|
default=None,
|
||||||
|
help="配置文件路径，支持.py格式的Python配置文件",
|
||||||
|
)
|
||||||
|
args = parser.parse_args()
|
||||||
|
|
||||||
|
# 构建注册表
|
||||||
|
build_registry(args.registry_path)
|
||||||
|
load_config_from_file(args.config)
|
||||||
|
|
||||||
|
from unilabos.app.mq import mqtt_client
|
||||||
|
|
||||||
|
# 连接mqtt
|
||||||
|
mqtt_client.start()
|
||||||
|
|
||||||
|
from unilabos.registry.registry import lab_registry
|
||||||
|
|
||||||
|
# 注册设备和资源
|
||||||
|
register_devices_and_resources(mqtt_client, lab_registry)
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
main()
|
||||||
@@ -30,7 +30,27 @@ class HTTPClient:
|
|||||||
self.auth = MQConfig.lab_id
|
self.auth = MQConfig.lab_id
|
||||||
info(f"HTTPClient 初始化完成: remote_addr={self.remote_addr}")
|
info(f"HTTPClient 初始化完成: remote_addr={self.remote_addr}")
|
||||||
|
|
||||||
def resource_add(self, resources: List[Dict[str, Any]], database_process_later:bool) -> requests.Response:
|
def resource_edge_add(self, resources: List[Dict[str, Any]], database_process_later: bool) -> requests.Response:
|
||||||
|
"""
|
||||||
|
添加资源
|
||||||
|
|
||||||
|
Args:
|
||||||
|
resources: 要添加的资源列表
|
||||||
|
database_process_later: 后台处理资源
|
||||||
|
Returns:
|
||||||
|
Response: API响应对象
|
||||||
|
"""
|
||||||
|
response = requests.post(
|
||||||
|
f"{self.remote_addr}/lab/resource/edge/batch_create/?database_process_later={1 if database_process_later else 0}",
|
||||||
|
json=resources,
|
||||||
|
headers={"Authorization": f"lab {self.auth}"},
|
||||||
|
timeout=100,
|
||||||
|
)
|
||||||
|
if response.status_code != 200 and response.status_code != 201:
|
||||||
|
logger.error(f"添加物料关系失败: {response.status_code}, {response.text}")
|
||||||
|
return response
|
||||||
|
|
||||||
|
def resource_add(self, resources: List[Dict[str, Any]], database_process_later: bool) -> requests.Response:
|
||||||
"""
|
"""
|
||||||
添加资源
|
添加资源
|
||||||
|
|
||||||
@@ -44,8 +64,10 @@ class HTTPClient:
|
|||||||
f"{self.remote_addr}/lab/resource/?database_process_later={1 if database_process_later else 0}",
|
f"{self.remote_addr}/lab/resource/?database_process_later={1 if database_process_later else 0}",
|
||||||
json=resources,
|
json=resources,
|
||||||
headers={"Authorization": f"lab {self.auth}"},
|
headers={"Authorization": f"lab {self.auth}"},
|
||||||
timeout=5,
|
timeout=100,
|
||||||
)
|
)
|
||||||
|
if response.status_code != 200:
|
||||||
|
logger.error(f"添加物料失败: {response.text}")
|
||||||
return response
|
return response
|
||||||
|
|
||||||
def resource_get(self, id: str, with_children: bool = False) -> Dict[str, Any]:
|
def resource_get(self, id: str, with_children: bool = False) -> Dict[str, Any]:
|
||||||
@@ -63,7 +85,7 @@ class HTTPClient:
|
|||||||
f"{self.remote_addr}/lab/resource/?edge_format=1",
|
f"{self.remote_addr}/lab/resource/?edge_format=1",
|
||||||
params={"id": id, "with_children": with_children},
|
params={"id": id, "with_children": with_children},
|
||||||
headers={"Authorization": f"lab {self.auth}"},
|
headers={"Authorization": f"lab {self.auth}"},
|
||||||
timeout=5,
|
timeout=20,
|
||||||
)
|
)
|
||||||
return response.json()
|
return response.json()
|
||||||
|
|
||||||
@@ -81,7 +103,7 @@ class HTTPClient:
|
|||||||
f"{self.remote_addr}/lab/resource/batch_delete/",
|
f"{self.remote_addr}/lab/resource/batch_delete/",
|
||||||
params={"id": id},
|
params={"id": id},
|
||||||
headers={"Authorization": f"lab {self.auth}"},
|
headers={"Authorization": f"lab {self.auth}"},
|
||||||
timeout=5,
|
timeout=20,
|
||||||
)
|
)
|
||||||
return response
|
return response
|
||||||
|
|
||||||
@@ -99,7 +121,7 @@ class HTTPClient:
|
|||||||
f"{self.remote_addr}/lab/resource/batch_update/?edge_format=1",
|
f"{self.remote_addr}/lab/resource/batch_update/?edge_format=1",
|
||||||
json=resources,
|
json=resources,
|
||||||
headers={"Authorization": f"lab {self.auth}"},
|
headers={"Authorization": f"lab {self.auth}"},
|
||||||
timeout=5,
|
timeout=100,
|
||||||
)
|
)
|
||||||
return response
|
return response
|
||||||
|
|
||||||
|
|||||||
@@ -16,7 +16,6 @@ from jinja2 import Environment, FileSystemLoader
|
|||||||
|
|
||||||
from unilabos.config.config import BasicConfig
|
from unilabos.config.config import BasicConfig
|
||||||
from unilabos.registry.registry import lab_registry
|
from unilabos.registry.registry import lab_registry
|
||||||
from unilabos.app.mq import mqtt_client
|
|
||||||
from unilabos.ros.msgs.message_converter import msg_converter_manager
|
from unilabos.ros.msgs.message_converter import msg_converter_manager
|
||||||
from unilabos.utils.log import error
|
from unilabos.utils.log import error
|
||||||
from unilabos.utils.type_check import TypeEncoder
|
from unilabos.utils.type_check import TypeEncoder
|
||||||
|
|||||||
@@ -8,7 +8,12 @@ from .agv_transfer_protocol import generate_agv_transfer_protocol
|
|||||||
from .add_protocol import generate_add_protocol
|
from .add_protocol import generate_add_protocol
|
||||||
from .centrifuge_protocol import generate_centrifuge_protocol
|
from .centrifuge_protocol import generate_centrifuge_protocol
|
||||||
from .filter_protocol import generate_filter_protocol
|
from .filter_protocol import generate_filter_protocol
|
||||||
from .heatchill_protocol import generate_heat_chill_protocol, generate_heat_chill_start_protocol, generate_heat_chill_stop_protocol
|
from .heatchill_protocol import (
|
||||||
|
generate_heat_chill_protocol,
|
||||||
|
generate_heat_chill_start_protocol,
|
||||||
|
generate_heat_chill_stop_protocol,
|
||||||
|
generate_heat_chill_to_temp_protocol # 保留导入，但不注册为协议
|
||||||
|
)
|
||||||
from .stir_protocol import generate_stir_protocol, generate_start_stir_protocol, generate_stop_stir_protocol
|
from .stir_protocol import generate_stir_protocol, generate_start_stir_protocol, generate_stop_stir_protocol
|
||||||
from .transfer_protocol import generate_transfer_protocol
|
from .transfer_protocol import generate_transfer_protocol
|
||||||
from .clean_vessel_protocol import generate_clean_vessel_protocol
|
from .clean_vessel_protocol import generate_clean_vessel_protocol
|
||||||
@@ -32,6 +37,7 @@ action_protocol_generators = {
|
|||||||
HeatChillProtocol: generate_heat_chill_protocol,
|
HeatChillProtocol: generate_heat_chill_protocol,
|
||||||
HeatChillStartProtocol: generate_heat_chill_start_protocol,
|
HeatChillStartProtocol: generate_heat_chill_start_protocol,
|
||||||
HeatChillStopProtocol: generate_heat_chill_stop_protocol,
|
HeatChillStopProtocol: generate_heat_chill_stop_protocol,
|
||||||
|
# HeatChillToTempProtocol: generate_heat_chill_to_temp_protocol, # **移除这行**
|
||||||
StirProtocol: generate_stir_protocol,
|
StirProtocol: generate_stir_protocol,
|
||||||
StartStirProtocol: generate_start_stir_protocol,
|
StartStirProtocol: generate_start_stir_protocol,
|
||||||
StopStirProtocol: generate_stop_stir_protocol,
|
StopStirProtocol: generate_stop_stir_protocol,
|
||||||
|
|||||||
@@ -1,74 +1,381 @@
|
|||||||
import networkx as nx
|
import networkx as nx
|
||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
|
from .pump_protocol import generate_pump_protocol_with_rinsing
|
||||||
def generate_add_protocol(
|
|
||||||
G: nx.DiGraph,
|
|
||||||
vessel: str,
|
def find_reagent_vessel(G: nx.DiGraph, reagent: str) -> str:
|
||||||
reagent: str,
|
"""
|
||||||
volume: float,
|
根据试剂名称查找对应的试剂瓶
|
||||||
mass: float,
|
|
||||||
amount: str,
|
Args:
|
||||||
time: float,
|
G: 网络图
|
||||||
stir: bool,
|
reagent: 试剂名称
|
||||||
stir_speed: float,
|
|
||||||
viscous: bool,
|
Returns:
|
||||||
purpose: str
|
str: 试剂瓶的vessel ID
|
||||||
) -> List[Dict[str, Any]]:
|
|
||||||
"""
|
Raises:
|
||||||
生成添加试剂的协议序列 - 严格按照 Add.action
|
ValueError: 如果找不到对应的试剂瓶
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
# 按照pump_protocol的命名规则查找试剂瓶
|
||||||
|
reagent_vessel_id = f"flask_{reagent}"
|
||||||
# 如果指定了体积，执行液体转移
|
|
||||||
if volume > 0:
|
if reagent_vessel_id in G.nodes():
|
||||||
# 查找可用的试剂瓶
|
return reagent_vessel_id
|
||||||
available_flasks = [node for node in G.nodes()
|
|
||||||
if node.startswith('flask_')
|
# 如果直接匹配失败，尝试模糊匹配
|
||||||
and G.nodes[node].get('type') == 'container']
|
for node in G.nodes():
|
||||||
|
if node.startswith('flask_') and reagent.lower() in node.lower():
|
||||||
if not available_flasks:
|
return node
|
||||||
raise ValueError("没有找到可用的试剂容器")
|
|
||||||
|
# 如果还是找不到，列出所有可用的试剂瓶
|
||||||
|
available_flasks = [node for node in G.nodes()
|
||||||
|
if node.startswith('flask_')
|
||||||
|
and G.nodes[node].get('type') == 'container']
|
||||||
|
|
||||||
|
raise ValueError(f"找不到试剂 '{reagent}' 对应的试剂瓶。可用试剂瓶: {available_flasks}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_connected_stirrer(G: nx.DiGraph, vessel: str) -> str:
|
||||||
|
"""
|
||||||
|
查找与指定容器相连的搅拌器
|
||||||
|
|
||||||
|
Args:
|
||||||
|
G: 网络图
|
||||||
|
vessel: 容器ID
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
str: 搅拌器ID，如果找不到则返回None
|
||||||
|
"""
|
||||||
|
# 查找所有搅拌器节点
|
||||||
|
stirrer_nodes = [node for node in G.nodes()
|
||||||
|
if G.nodes[node].get('class') == 'virtual_stirrer']
|
||||||
|
|
||||||
|
# 检查哪个搅拌器与目标容器相连
|
||||||
|
for stirrer in stirrer_nodes:
|
||||||
|
if G.has_edge(stirrer, vessel) or G.has_edge(vessel, stirrer):
|
||||||
|
return stirrer
|
||||||
|
|
||||||
|
# 如果没有直接连接，返回第一个可用的搅拌器
|
||||||
|
return stirrer_nodes[0] if stirrer_nodes else None
|
||||||
|
|
||||||
|
|
||||||
|
def generate_add_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
reagent: str,
|
||||||
|
volume: float,
|
||||||
|
mass: float = 0.0,
|
||||||
|
amount: str = "",
|
||||||
|
time: float = 0.0,
|
||||||
|
stir: bool = False,
|
||||||
|
stir_speed: float = 300.0,
|
||||||
|
viscous: bool = False,
|
||||||
|
purpose: str = "添加试剂"
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""
|
||||||
|
生成添加试剂的协议序列
|
||||||
|
|
||||||
|
基于pump_protocol的成熟算法，实现试剂添加功能：
|
||||||
|
1. 自动查找试剂瓶
|
||||||
|
2. **先启动搅拌，再进行转移** - 确保试剂添加更均匀
|
||||||
|
3. 使用pump_protocol实现液体转移
|
||||||
|
|
||||||
|
Args:
|
||||||
|
G: 有向图，节点为容器和设备，边为连接关系
|
||||||
|
vessel: 目标容器（要添加试剂的容器）
|
||||||
|
reagent: 试剂名称（用于查找对应的试剂瓶）
|
||||||
|
volume: 要添加的体积 (mL)
|
||||||
|
mass: 要添加的质量 (g) - 暂时未使用，预留接口
|
||||||
|
amount: 其他数量描述
|
||||||
|
time: 添加时间 (s)，如果指定则计算流速
|
||||||
|
stir: 是否启用搅拌
|
||||||
|
stir_speed: 搅拌速度 (RPM)
|
||||||
|
viscous: 是否为粘稠液体
|
||||||
|
purpose: 添加目的描述
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
List[Dict[str, Any]]: 动作序列
|
||||||
|
|
||||||
|
Raises:
|
||||||
|
ValueError: 当找不到必要的设备或容器时
|
||||||
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
|
# 1. 验证目标容器存在
|
||||||
|
if vessel not in G.nodes():
|
||||||
|
raise ValueError(f"目标容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
|
# 2. 查找试剂瓶
|
||||||
|
try:
|
||||||
|
reagent_vessel = find_reagent_vessel(G, reagent)
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到试剂 '{reagent}': {str(e)}")
|
||||||
|
|
||||||
|
# 3. 验证是否存在从试剂瓶到目标容器的路径
|
||||||
|
try:
|
||||||
|
path = nx.shortest_path(G, source=reagent_vessel, target=vessel)
|
||||||
|
print(f"ADD_PROTOCOL: 找到路径 {reagent_vessel} -> {vessel}: {path}")
|
||||||
|
except nx.NetworkXNoPath:
|
||||||
|
raise ValueError(f"从试剂瓶 '{reagent_vessel}' 到目标容器 '{vessel}' 没有可用路径")
|
||||||
|
|
||||||
|
# 4. **先启动搅拌** - 关键改进！
|
||||||
|
if stir:
|
||||||
|
try:
|
||||||
|
stirrer_id = find_connected_stirrer(G, vessel)
|
||||||
|
|
||||||
reagent_vessel = available_flasks[0]
|
if stirrer_id:
|
||||||
|
print(f"ADD_PROTOCOL: 找到搅拌器 {stirrer_id}，将在添加前启动搅拌")
|
||||||
# 查找泵设备
|
|
||||||
pump_nodes = [node for node in G.nodes()
|
# 先启动搅拌
|
||||||
if G.nodes[node].get('class') == 'virtual_pump']
|
stir_action = {
|
||||||
|
"device_id": stirrer_id,
|
||||||
if pump_nodes:
|
"action_name": "start_stir",
|
||||||
pump_id = pump_nodes[0]
|
"action_kwargs": {
|
||||||
action_sequence.append({
|
"vessel": vessel,
|
||||||
"device_id": pump_id,
|
"stir_speed": stir_speed,
|
||||||
"action_name": "transfer",
|
"purpose": f"{purpose}: 启动搅拌，准备添加 {reagent}"
|
||||||
"action_kwargs": {
|
}
|
||||||
"from_vessel": reagent_vessel,
|
|
||||||
"to_vessel": vessel,
|
|
||||||
"volume": volume,
|
|
||||||
"amount": amount,
|
|
||||||
"time": time,
|
|
||||||
"viscous": viscous,
|
|
||||||
"rinsing_solvent": "",
|
|
||||||
"rinsing_volume": 0.0,
|
|
||||||
"rinsing_repeats": 0,
|
|
||||||
"solid": False
|
|
||||||
}
|
}
|
||||||
})
|
|
||||||
|
action_sequence.append(stir_action)
|
||||||
# 如果需要搅拌，使用 StartStir 而不是 Stir
|
print(f"ADD_PROTOCOL: 已添加搅拌动作，速度 {stir_speed} RPM")
|
||||||
if stir:
|
else:
|
||||||
stirrer_nodes = [node for node in G.nodes()
|
print(f"ADD_PROTOCOL: 警告 - 需要搅拌但未找到与容器 {vessel} 相连的搅拌器")
|
||||||
if G.nodes[node].get('class') == 'virtual_stirrer']
|
|
||||||
|
except Exception as e:
|
||||||
if stirrer_nodes:
|
print(f"ADD_PROTOCOL: 搅拌器配置出错: {str(e)}")
|
||||||
stirrer_id = stirrer_nodes[0]
|
|
||||||
action_sequence.append({
|
# 5. 如果指定了体积，执行液体转移
|
||||||
"device_id": stirrer_id,
|
if volume > 0:
|
||||||
"action_name": "start_stir", # 使用 start_stir 而不是 stir
|
# 5.1 计算流速参数
|
||||||
"action_kwargs": {
|
if time > 0:
|
||||||
|
# 根据时间计算流速
|
||||||
|
transfer_flowrate = volume / time
|
||||||
|
flowrate = transfer_flowrate
|
||||||
|
else:
|
||||||
|
# 使用默认流速
|
||||||
|
if viscous:
|
||||||
|
transfer_flowrate = 0.3 # 粘稠液体用较慢速度
|
||||||
|
flowrate = 1.0
|
||||||
|
else:
|
||||||
|
transfer_flowrate = 0.5 # 普通液体默认速度
|
||||||
|
flowrate = 2.5
|
||||||
|
|
||||||
|
print(f"ADD_PROTOCOL: 准备转移 {volume} mL 从 {reagent_vessel} 到 {vessel}")
|
||||||
|
print(f"ADD_PROTOCOL: 转移流速={transfer_flowrate} mL/s, 注入流速={flowrate} mL/s")
|
||||||
|
|
||||||
|
# 5.2 使用pump_protocol的核心算法实现液体转移
|
||||||
|
try:
|
||||||
|
pump_actions = generate_pump_protocol_with_rinsing(
|
||||||
|
G=G,
|
||||||
|
from_vessel=reagent_vessel,
|
||||||
|
to_vessel=vessel,
|
||||||
|
volume=volume,
|
||||||
|
amount=amount,
|
||||||
|
time=time,
|
||||||
|
viscous=viscous,
|
||||||
|
rinsing_solvent="", # 添加试剂通常不需要清洗
|
||||||
|
rinsing_volume=0.0,
|
||||||
|
rinsing_repeats=0,
|
||||||
|
solid=False,
|
||||||
|
flowrate=flowrate,
|
||||||
|
transfer_flowrate=transfer_flowrate
|
||||||
|
)
|
||||||
|
|
||||||
|
# 添加pump actions到序列中
|
||||||
|
action_sequence.extend(pump_actions)
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"生成泵协议时出错: {str(e)}")
|
||||||
|
|
||||||
|
print(f"ADD_PROTOCOL: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
def generate_add_protocol_with_cleaning(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
reagent: str,
|
||||||
|
volume: float,
|
||||||
|
mass: float = 0.0,
|
||||||
|
amount: str = "",
|
||||||
|
time: float = 0.0,
|
||||||
|
stir: bool = False,
|
||||||
|
stir_speed: float = 300.0,
|
||||||
|
viscous: bool = False,
|
||||||
|
purpose: str = "添加试剂",
|
||||||
|
cleaning_solvent: str = "air",
|
||||||
|
cleaning_volume: float = 5.0,
|
||||||
|
cleaning_repeats: int = 1
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""
|
||||||
|
生成带清洗的添加试剂协议
|
||||||
|
|
||||||
|
与普通添加协议的区别是会在添加后进行管道清洗
|
||||||
|
|
||||||
|
Args:
|
||||||
|
G: 有向图
|
||||||
|
vessel: 目标容器
|
||||||
|
reagent: 试剂名称
|
||||||
|
volume: 添加体积
|
||||||
|
mass: 添加质量（预留）
|
||||||
|
amount: 其他数量描述
|
||||||
|
time: 添加时间
|
||||||
|
stir: 是否搅拌
|
||||||
|
stir_speed: 搅拌速度
|
||||||
|
viscous: 是否粘稠
|
||||||
|
purpose: 添加目的
|
||||||
|
cleaning_solvent: 清洗溶剂（"air"表示空气清洗）
|
||||||
|
cleaning_volume: 清洗体积
|
||||||
|
cleaning_repeats: 清洗重复次数
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
List[Dict[str, Any]]: 动作序列
|
||||||
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
|
# 1. 查找试剂瓶
|
||||||
|
reagent_vessel = find_reagent_vessel(G, reagent)
|
||||||
|
|
||||||
|
# 2. **先启动搅拌**
|
||||||
|
if stir:
|
||||||
|
stirrer_id = find_connected_stirrer(G, vessel)
|
||||||
|
if stirrer_id:
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": stirrer_id,
|
||||||
|
"action_name": "start_stir",
|
||||||
|
"action_kwargs": {
|
||||||
"vessel": vessel,
|
"vessel": vessel,
|
||||||
"stir_speed": stir_speed,
|
"stir_speed": stir_speed,
|
||||||
"purpose": f"添加 {reagent} 后搅拌"
|
"purpose": f"{purpose}: 启动搅拌，准备添加 {reagent}"
|
||||||
}
|
}
|
||||||
})
|
})
|
||||||
|
|
||||||
return action_sequence
|
# 3. 计算流速
|
||||||
|
if time > 0:
|
||||||
|
transfer_flowrate = volume / time
|
||||||
|
flowrate = transfer_flowrate
|
||||||
|
else:
|
||||||
|
if viscous:
|
||||||
|
transfer_flowrate = 0.3
|
||||||
|
flowrate = 1.0
|
||||||
|
else:
|
||||||
|
transfer_flowrate = 0.5
|
||||||
|
flowrate = 2.5
|
||||||
|
|
||||||
|
# 4. 使用带清洗的pump_protocol
|
||||||
|
pump_actions = generate_pump_protocol_with_rinsing(
|
||||||
|
G=G,
|
||||||
|
from_vessel=reagent_vessel,
|
||||||
|
to_vessel=vessel,
|
||||||
|
volume=volume,
|
||||||
|
amount=amount,
|
||||||
|
time=time,
|
||||||
|
viscous=viscous,
|
||||||
|
rinsing_solvent=cleaning_solvent,
|
||||||
|
rinsing_volume=cleaning_volume,
|
||||||
|
rinsing_repeats=cleaning_repeats,
|
||||||
|
solid=False,
|
||||||
|
flowrate=flowrate,
|
||||||
|
transfer_flowrate=transfer_flowrate
|
||||||
|
)
|
||||||
|
|
||||||
|
action_sequence.extend(pump_actions)
|
||||||
|
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
def generate_sequential_add_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
reagents: List[Dict[str, Any]],
|
||||||
|
stir_between_additions: bool = True,
|
||||||
|
final_stir: bool = True,
|
||||||
|
final_stir_speed: float = 400.0,
|
||||||
|
final_stir_time: float = 300.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""
|
||||||
|
生成连续添加多种试剂的协议
|
||||||
|
|
||||||
|
Args:
|
||||||
|
G: 网络图
|
||||||
|
vessel: 目标容器
|
||||||
|
reagents: 试剂列表，每个元素包含试剂添加参数
|
||||||
|
stir_between_additions: 是否在每次添加之间搅拌
|
||||||
|
final_stir: 是否在所有添加完成后进行最终搅拌
|
||||||
|
final_stir_speed: 最终搅拌速度
|
||||||
|
final_stir_time: 最终搅拌时间
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
List[Dict[str, Any]]: 完整的动作序列
|
||||||
|
|
||||||
|
Example:
|
||||||
|
reagents = [
|
||||||
|
{
|
||||||
|
"reagent": "DMF",
|
||||||
|
"volume": 10.0,
|
||||||
|
"viscous": False,
|
||||||
|
"stir_speed": 300.0
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"reagent": "ethyl_acetate",
|
||||||
|
"volume": 5.0,
|
||||||
|
"viscous": False,
|
||||||
|
"stir_speed": 350.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
|
for i, reagent_params in enumerate(reagents):
|
||||||
|
print(f"ADD_PROTOCOL: 处理第 {i+1}/{len(reagents)} 个试剂: {reagent_params.get('reagent')}")
|
||||||
|
|
||||||
|
# 生成单个试剂的添加协议
|
||||||
|
add_actions = generate_add_protocol(
|
||||||
|
G=G,
|
||||||
|
vessel=vessel,
|
||||||
|
reagent=reagent_params.get('reagent'),
|
||||||
|
volume=reagent_params.get('volume', 0.0),
|
||||||
|
mass=reagent_params.get('mass', 0.0),
|
||||||
|
amount=reagent_params.get('amount', ''),
|
||||||
|
time=reagent_params.get('time', 0.0),
|
||||||
|
stir=stir_between_additions,
|
||||||
|
stir_speed=reagent_params.get('stir_speed', 300.0),
|
||||||
|
viscous=reagent_params.get('viscous', False),
|
||||||
|
purpose=reagent_params.get('purpose', f'添加试剂 {i+1}')
|
||||||
|
)
|
||||||
|
|
||||||
|
action_sequence.extend(add_actions)
|
||||||
|
|
||||||
|
# 在添加之间加入等待时间
|
||||||
|
if i < len(reagents) - 1: # 不是最后一个试剂
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 2}
|
||||||
|
})
|
||||||
|
|
||||||
|
# 最终搅拌
|
||||||
|
if final_stir:
|
||||||
|
stirrer_id = find_connected_stirrer(G, vessel)
|
||||||
|
if stirrer_id:
|
||||||
|
action_sequence.extend([
|
||||||
|
{
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": final_stir_time}
|
||||||
|
}
|
||||||
|
])
|
||||||
|
|
||||||
|
print(f"ADD_PROTOCOL: 连续添加协议生成完成，共 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 使用示例和测试函数
|
||||||
|
def test_add_protocol():
|
||||||
|
"""测试添加协议的示例"""
|
||||||
|
print("=== ADD PROTOCOL 测试 ===")
|
||||||
|
print("测试完成")
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
test_add_protocol()
|
||||||
@@ -1,5 +1,59 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from .pump_protocol import generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def get_vessel_liquid_volume(G: nx.DiGraph, vessel: str) -> float:
|
||||||
|
"""
|
||||||
|
获取容器中的液体体积
|
||||||
|
"""
|
||||||
|
if vessel not in G.nodes():
|
||||||
|
return 0.0
|
||||||
|
|
||||||
|
vessel_data = G.nodes[vessel].get('data', {})
|
||||||
|
liquids = vessel_data.get('liquid', [])
|
||||||
|
|
||||||
|
total_volume = 0.0
|
||||||
|
for liquid in liquids:
|
||||||
|
if isinstance(liquid, dict) and 'liquid_volume' in liquid:
|
||||||
|
total_volume += liquid['liquid_volume']
|
||||||
|
|
||||||
|
return total_volume
|
||||||
|
|
||||||
|
|
||||||
|
def find_centrifuge_device(G: nx.DiGraph) -> str:
|
||||||
|
"""
|
||||||
|
查找离心机设备
|
||||||
|
"""
|
||||||
|
centrifuge_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_centrifuge']
|
||||||
|
|
||||||
|
if centrifuge_nodes:
|
||||||
|
return centrifuge_nodes[0]
|
||||||
|
|
||||||
|
raise ValueError("系统中未找到离心机设备")
|
||||||
|
|
||||||
|
|
||||||
|
def find_centrifuge_vessel(G: nx.DiGraph) -> str:
|
||||||
|
"""
|
||||||
|
查找离心机专用容器
|
||||||
|
"""
|
||||||
|
possible_names = [
|
||||||
|
"centrifuge_tube",
|
||||||
|
"centrifuge_vessel",
|
||||||
|
"tube_centrifuge",
|
||||||
|
"vessel_centrifuge",
|
||||||
|
"centrifuge",
|
||||||
|
"tube_15ml",
|
||||||
|
"tube_50ml"
|
||||||
|
]
|
||||||
|
|
||||||
|
for vessel_name in possible_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到离心机容器。尝试了以下名称: {possible_names}")
|
||||||
|
|
||||||
|
|
||||||
def generate_centrifuge_protocol(
|
def generate_centrifuge_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
@@ -9,115 +63,223 @@ def generate_centrifuge_protocol(
|
|||||||
temp: float = 25.0
|
temp: float = 25.0
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成离心操作的协议序列
|
生成离心操作的协议序列，复用 pump_protocol 的成熟算法
|
||||||
|
|
||||||
|
离心流程：
|
||||||
|
1. 液体转移：将待离心溶液从源容器转移到离心机容器
|
||||||
|
2. 离心操作：执行离心分离
|
||||||
|
3. 上清液转移：将离心后的上清液转移回原容器或新容器
|
||||||
|
4. 沉淀处理：处理离心沉淀（可选）
|
||||||
|
|
||||||
Args:
|
Args:
|
||||||
G: 有向图，节点为设备和容器
|
G: 有向图，节点为设备和容器，边为流体管道
|
||||||
vessel: 离心容器名称
|
vessel: 包含待离心溶液的容器名称
|
||||||
speed: 离心速度 (rpm)
|
speed: 离心速度 (rpm)
|
||||||
time: 离心时间 (秒)
|
time: 离心时间 (秒)
|
||||||
temp: 温度 (摄氏度，可选)
|
temp: 离心温度 (°C)，默认25°C
|
||||||
|
|
||||||
Returns:
|
Returns:
|
||||||
List[Dict[str, Any]]: 离心操作的动作序列
|
List[Dict[str, Any]]: 离心操作的动作序列
|
||||||
|
|
||||||
Raises:
|
Raises:
|
||||||
ValueError: 当找不到离心机设备时抛出异常
|
ValueError: 当找不到必要的设备时抛出异常
|
||||||
|
|
||||||
Examples:
|
Examples:
|
||||||
centrifuge_protocol = generate_centrifuge_protocol(G, "reactor", 5000, 300, 4.0)
|
centrifuge_actions = generate_centrifuge_protocol(G, "reaction_mixture", 5000, 600, 4.0)
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 查找离心机设备
|
print(f"CENTRIFUGE: 开始生成离心协议")
|
||||||
centrifuge_nodes = [node for node in G.nodes()
|
print(f" - 源容器: {vessel}")
|
||||||
if G.nodes[node].get('class') == 'virtual_centrifuge']
|
print(f" - 离心速度: {speed} rpm")
|
||||||
|
print(f" - 离心时间: {time}s ({time/60:.1f}分钟)")
|
||||||
|
print(f" - 离心温度: {temp}°C")
|
||||||
|
|
||||||
if not centrifuge_nodes:
|
# 验证源容器存在
|
||||||
raise ValueError("没有找到可用的离心机设备")
|
|
||||||
|
|
||||||
# 使用第一个可用的离心机
|
|
||||||
centrifuge_id = centrifuge_nodes[0]
|
|
||||||
|
|
||||||
# 验证容器是否存在
|
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"源容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
# 执行离心操作
|
# 获取源容器中的液体体积
|
||||||
action_sequence.append({
|
source_volume = get_vessel_liquid_volume(G, vessel)
|
||||||
|
print(f"CENTRIFUGE: 源容器 {vessel} 中有 {source_volume} mL 液体")
|
||||||
|
|
||||||
|
# 查找离心机设备
|
||||||
|
try:
|
||||||
|
centrifuge_id = find_centrifuge_device(G)
|
||||||
|
print(f"CENTRIFUGE: 找到离心机: {centrifuge_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到离心机: {str(e)}")
|
||||||
|
|
||||||
|
# 查找离心机容器
|
||||||
|
try:
|
||||||
|
centrifuge_vessel = find_centrifuge_vessel(G)
|
||||||
|
print(f"CENTRIFUGE: 找到离心机容器: {centrifuge_vessel}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到离心机容器: {str(e)}")
|
||||||
|
|
||||||
|
# === 简化的体积计算策略 ===
|
||||||
|
if source_volume > 0:
|
||||||
|
# 如果能检测到液体体积，使用实际体积的大部分
|
||||||
|
transfer_volume = min(source_volume * 0.9, 15.0) # 90%或最多15mL（离心管通常较小）
|
||||||
|
print(f"CENTRIFUGE: 检测到液体体积，将转移 {transfer_volume} mL")
|
||||||
|
else:
|
||||||
|
# 如果检测不到液体体积，默认转移标准量
|
||||||
|
transfer_volume = 10.0 # 标准离心管体积
|
||||||
|
print(f"CENTRIFUGE: 未检测到液体体积，默认转移 {transfer_volume} mL")
|
||||||
|
|
||||||
|
# === 第一步：将待离心溶液转移到离心机容器 ===
|
||||||
|
print(f"CENTRIFUGE: 将 {transfer_volume} mL 溶液从 {vessel} 转移到 {centrifuge_vessel}")
|
||||||
|
try:
|
||||||
|
# 使用成熟的 pump_protocol 算法进行液体转移
|
||||||
|
transfer_to_centrifuge_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=vessel,
|
||||||
|
to_vessel=centrifuge_vessel,
|
||||||
|
volume=transfer_volume,
|
||||||
|
flowrate=1.0, # 离心转移用慢速，避免气泡
|
||||||
|
transfer_flowrate=1.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(transfer_to_centrifuge_actions)
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"无法将溶液转移到离心机: {str(e)}")
|
||||||
|
|
||||||
|
# 转移后等待
|
||||||
|
wait_action = {
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 5}
|
||||||
|
}
|
||||||
|
action_sequence.append(wait_action)
|
||||||
|
|
||||||
|
# === 第二步：执行离心操作 ===
|
||||||
|
print(f"CENTRIFUGE: 执行离心操作")
|
||||||
|
centrifuge_action = {
|
||||||
"device_id": centrifuge_id,
|
"device_id": centrifuge_id,
|
||||||
"action_name": "centrifuge",
|
"action_name": "centrifuge",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"vessel": vessel,
|
"vessel": centrifuge_vessel,
|
||||||
"speed": speed,
|
"speed": speed,
|
||||||
"time": time,
|
"time": time,
|
||||||
"temp": temp
|
"temp": temp
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
action_sequence.append(centrifuge_action)
|
||||||
|
|
||||||
|
# 离心后等待系统稳定
|
||||||
|
wait_action = {
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 10} # 离心后等待稍长，让沉淀稳定
|
||||||
|
}
|
||||||
|
action_sequence.append(wait_action)
|
||||||
|
|
||||||
|
# === 第三步：将上清液转移回原容器 ===
|
||||||
|
print(f"CENTRIFUGE: 将上清液从离心机转移回 {vessel}")
|
||||||
|
try:
|
||||||
|
# 估算上清液体积（约为转移体积的80% - 假设20%成为沉淀）
|
||||||
|
supernatant_volume = transfer_volume * 0.8
|
||||||
|
print(f"CENTRIFUGE: 预计上清液体积 {supernatant_volume} mL")
|
||||||
|
|
||||||
|
transfer_back_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=centrifuge_vessel,
|
||||||
|
to_vessel=vessel,
|
||||||
|
volume=supernatant_volume,
|
||||||
|
flowrate=0.5, # 上清液转移更慢，避免扰动沉淀
|
||||||
|
transfer_flowrate=0.5
|
||||||
|
)
|
||||||
|
action_sequence.extend(transfer_back_actions)
|
||||||
|
except Exception as e:
|
||||||
|
print(f"CENTRIFUGE: 将上清液转移回容器失败: {str(e)}")
|
||||||
|
|
||||||
|
# === 第四步：清洗离心机容器 ===
|
||||||
|
print(f"CENTRIFUGE: 清洗离心机容器")
|
||||||
|
try:
|
||||||
|
# 查找清洗溶剂
|
||||||
|
cleaning_solvent = None
|
||||||
|
for solvent in ["flask_water", "flask_ethanol", "flask_acetone"]:
|
||||||
|
if solvent in G.nodes():
|
||||||
|
cleaning_solvent = solvent
|
||||||
|
break
|
||||||
|
|
||||||
|
if cleaning_solvent:
|
||||||
|
# 用少量溶剂清洗离心管
|
||||||
|
cleaning_volume = 5.0 # 5mL清洗
|
||||||
|
print(f"CENTRIFUGE: 用 {cleaning_volume} mL {cleaning_solvent} 清洗")
|
||||||
|
|
||||||
|
# 清洗溶剂加入
|
||||||
|
cleaning_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=cleaning_solvent,
|
||||||
|
to_vessel=centrifuge_vessel,
|
||||||
|
volume=cleaning_volume,
|
||||||
|
flowrate=2.0,
|
||||||
|
transfer_flowrate=2.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(cleaning_actions)
|
||||||
|
|
||||||
|
# 将清洗液转移到废液
|
||||||
|
if "waste_workup" in G.nodes():
|
||||||
|
waste_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=centrifuge_vessel,
|
||||||
|
to_vessel="waste_workup",
|
||||||
|
volume=cleaning_volume,
|
||||||
|
flowrate=2.0,
|
||||||
|
transfer_flowrate=2.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(waste_actions)
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
print(f"CENTRIFUGE: 清洗步骤失败: {str(e)}")
|
||||||
|
|
||||||
|
print(f"CENTRIFUGE: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
print(f"CENTRIFUGE: 离心协议生成完成")
|
||||||
|
print(f"CENTRIFUGE: 总处理体积: {transfer_volume} mL")
|
||||||
|
|
||||||
return action_sequence
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
def generate_multi_step_centrifuge_protocol(
|
# 便捷函数：常用离心方案
|
||||||
|
def generate_low_speed_centrifuge_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
vessel: str,
|
vessel: str,
|
||||||
steps: List[Dict[str, Any]]
|
time: float = 300.0 # 5分钟
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""低速离心：细胞分离或大颗粒沉淀"""
|
||||||
生成多步骤离心操作的协议序列
|
return generate_centrifuge_protocol(G, vessel, 1000.0, time, 4.0)
|
||||||
|
|
||||||
Args:
|
|
||||||
G: 有向图，节点为设备和容器
|
def generate_high_speed_centrifuge_protocol(
|
||||||
vessel: 离心容器名称
|
G: nx.DiGraph,
|
||||||
steps: 离心步骤列表，每个步骤包含 speed, time, temp 参数
|
vessel: str,
|
||||||
|
time: float = 600.0 # 10分钟
|
||||||
Returns:
|
) -> List[Dict[str, Any]]:
|
||||||
List[Dict[str, Any]]: 多步骤离心操作的动作序列
|
"""高速离心：蛋白质沉淀或小颗粒分离"""
|
||||||
|
return generate_centrifuge_protocol(G, vessel, 12000.0, time, 4.0)
|
||||||
Examples:
|
|
||||||
steps = [
|
|
||||||
{"speed": 1000, "time": 60, "temp": 4.0}, # 低速预离心
|
def generate_standard_centrifuge_protocol(
|
||||||
{"speed": 12000, "time": 600, "temp": 4.0} # 高速离心
|
G: nx.DiGraph,
|
||||||
]
|
vessel: str,
|
||||||
protocol = generate_multi_step_centrifuge_protocol(G, "reactor", steps)
|
time: float = 600.0 # 10分钟
|
||||||
"""
|
) -> List[Dict[str, Any]]:
|
||||||
action_sequence = []
|
"""标准离心：常规样品处理"""
|
||||||
|
return generate_centrifuge_protocol(G, vessel, 5000.0, time, 25.0)
|
||||||
# 查找离心机设备
|
|
||||||
centrifuge_nodes = [node for node in G.nodes()
|
|
||||||
if G.nodes[node].get('class') == 'virtual_centrifuge']
|
def generate_cold_centrifuge_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
if not centrifuge_nodes:
|
vessel: str,
|
||||||
raise ValueError("没有找到可用的离心机设备")
|
speed: float = 5000.0,
|
||||||
|
time: float = 600.0
|
||||||
centrifuge_id = centrifuge_nodes[0]
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""冷冻离心：热敏感样品处理"""
|
||||||
# 验证容器是否存在
|
return generate_centrifuge_protocol(G, vessel, speed, time, 4.0)
|
||||||
if vessel not in G.nodes():
|
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
|
||||||
|
def generate_ultra_centrifuge_protocol(
|
||||||
# 执行每个离心步骤
|
G: nx.DiGraph,
|
||||||
for i, step in enumerate(steps):
|
vessel: str,
|
||||||
speed = step.get('speed', 5000)
|
time: float = 1800.0 # 30分钟
|
||||||
time = step.get('time', 300)
|
) -> List[Dict[str, Any]]:
|
||||||
temp = step.get('temp', 25.0)
|
"""超高速离心：超细颗粒分离"""
|
||||||
|
return generate_centrifuge_protocol(G, vessel, 15000.0, time, 4.0)
|
||||||
action_sequence.append({
|
|
||||||
"device_id": centrifuge_id,
|
|
||||||
"action_name": "centrifuge",
|
|
||||||
"action_kwargs": {
|
|
||||||
"vessel": vessel,
|
|
||||||
"speed": speed,
|
|
||||||
"time": time,
|
|
||||||
"temp": temp
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
# 步骤间等待时间（除了最后一步）
|
|
||||||
if i < len(steps) - 1:
|
|
||||||
action_sequence.append({
|
|
||||||
"action_name": "wait",
|
|
||||||
"action_kwargs": {"time": 3}
|
|
||||||
})
|
|
||||||
|
|
||||||
return action_sequence
|
|
||||||
@@ -1,5 +1,69 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from .pump_protocol import generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def find_solvent_vessel(G: nx.DiGraph, solvent: str) -> str:
|
||||||
|
"""
|
||||||
|
查找溶剂容器，支持多种命名模式
|
||||||
|
"""
|
||||||
|
# 可能的溶剂容器命名模式
|
||||||
|
possible_names = [
|
||||||
|
f"flask_{solvent}", # flask_water, flask_ethanol
|
||||||
|
f"bottle_{solvent}", # bottle_water, bottle_ethanol
|
||||||
|
f"vessel_{solvent}", # vessel_water, vessel_ethanol
|
||||||
|
f"{solvent}_flask", # water_flask, ethanol_flask
|
||||||
|
f"{solvent}_bottle", # water_bottle, ethanol_bottle
|
||||||
|
f"{solvent}", # 直接用溶剂名
|
||||||
|
f"solvent_{solvent}", # solvent_water, solvent_ethanol
|
||||||
|
]
|
||||||
|
|
||||||
|
for vessel_name in possible_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到溶剂 '{solvent}' 的容器。尝试了以下名称: {possible_names}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_waste_vessel(G: nx.DiGraph) -> str:
|
||||||
|
"""
|
||||||
|
查找废液容器
|
||||||
|
"""
|
||||||
|
possible_waste_names = [
|
||||||
|
"waste_workup",
|
||||||
|
"flask_waste",
|
||||||
|
"bottle_waste",
|
||||||
|
"waste",
|
||||||
|
"waste_vessel",
|
||||||
|
"waste_container"
|
||||||
|
]
|
||||||
|
|
||||||
|
for waste_name in possible_waste_names:
|
||||||
|
if waste_name in G.nodes():
|
||||||
|
return waste_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到废液容器。尝试了以下名称: {possible_waste_names}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_connected_heatchill(G: nx.DiGraph, vessel: str) -> str:
|
||||||
|
"""
|
||||||
|
查找与指定容器相连的加热冷却设备
|
||||||
|
"""
|
||||||
|
# 查找所有加热冷却设备节点
|
||||||
|
heatchill_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_heatchill']
|
||||||
|
|
||||||
|
# 检查哪个加热设备与目标容器相连（机械连接）
|
||||||
|
for heatchill in heatchill_nodes:
|
||||||
|
if G.has_edge(heatchill, vessel) or G.has_edge(vessel, heatchill):
|
||||||
|
return heatchill
|
||||||
|
|
||||||
|
# 如果没有直接连接，返回第一个可用的加热设备
|
||||||
|
if heatchill_nodes:
|
||||||
|
return heatchill_nodes[0]
|
||||||
|
|
||||||
|
return None # 没有加热设备也可以工作，只是不能加热
|
||||||
|
|
||||||
|
|
||||||
def generate_clean_vessel_protocol(
|
def generate_clean_vessel_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
@@ -10,13 +74,22 @@ def generate_clean_vessel_protocol(
|
|||||||
repeats: int = 1
|
repeats: int = 1
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成容器清洗操作的协议序列，使用transfer操作实现清洗
|
生成容器清洗操作的协议序列，复用 pump_protocol 的成熟算法
|
||||||
|
|
||||||
|
清洗流程：
|
||||||
|
1. 查找溶剂容器和废液容器
|
||||||
|
2. 如果需要加热，启动加热设备
|
||||||
|
3. 重复以下操作 repeats 次：
|
||||||
|
a. 使用 pump_protocol 将溶剂从溶剂容器转移到目标容器
|
||||||
|
b. (可选) 等待清洗作用时间
|
||||||
|
c. 使用 pump_protocol 将清洗液从目标容器转移到废液容器
|
||||||
|
4. 如果加热了，停止加热
|
||||||
|
|
||||||
Args:
|
Args:
|
||||||
G: 有向图，节点为设备和容器
|
G: 有向图，节点为设备和容器，边为流体管道
|
||||||
vessel: 要清洗的容器名称
|
vessel: 要清洗的容器名称
|
||||||
solvent: 用于清洗容器的溶剂名称
|
solvent: 用于清洗的溶剂名称
|
||||||
volume: 清洗溶剂的体积
|
volume: 每次清洗使用的溶剂体积
|
||||||
temp: 清洗时的温度
|
temp: 清洗时的温度
|
||||||
repeats: 清洗操作的重复次数，默认为 1
|
repeats: 清洗操作的重复次数，默认为 1
|
||||||
|
|
||||||
@@ -24,103 +97,188 @@ def generate_clean_vessel_protocol(
|
|||||||
List[Dict[str, Any]]: 容器清洗操作的动作序列
|
List[Dict[str, Any]]: 容器清洗操作的动作序列
|
||||||
|
|
||||||
Raises:
|
Raises:
|
||||||
ValueError: 当找不到必要的设备时抛出异常
|
ValueError: 当找不到必要的容器或设备时抛出异常
|
||||||
|
|
||||||
Examples:
|
Examples:
|
||||||
clean_vessel_protocol = generate_clean_vessel_protocol(G, "reactor", "water", 50.0, 25.0, 2)
|
clean_protocol = generate_clean_vessel_protocol(G, "main_reactor", "water", 100.0, 60.0, 2)
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 查找虚拟转移泵设备进行清洗操作
|
print(f"CLEAN_VESSEL: 开始生成容器清洗协议")
|
||||||
pump_nodes = [node for node in G.nodes()
|
print(f" - 目标容器: {vessel}")
|
||||||
if G.nodes[node].get('class') == 'virtual_transfer_pump']
|
print(f" - 清洗溶剂: {solvent}")
|
||||||
|
print(f" - 清洗体积: {volume} mL")
|
||||||
|
print(f" - 清洗温度: {temp}°C")
|
||||||
|
print(f" - 重复次数: {repeats}")
|
||||||
|
|
||||||
if not pump_nodes:
|
# 验证目标容器存在
|
||||||
raise ValueError("没有找到可用的转移泵设备进行容器清洗")
|
|
||||||
|
|
||||||
pump_id = pump_nodes[0]
|
|
||||||
|
|
||||||
# 验证容器是否存在
|
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"目标容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
# 查找溶剂容器
|
# 查找溶剂容器
|
||||||
solvent_vessel = f"flask_{solvent}"
|
try:
|
||||||
if solvent_vessel not in G.nodes():
|
solvent_vessel = find_solvent_vessel(G, solvent)
|
||||||
raise ValueError(f"溶剂容器 {solvent_vessel} 不存在于图中")
|
print(f"CLEAN_VESSEL: 找到溶剂容器: {solvent_vessel}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到溶剂容器: {str(e)}")
|
||||||
|
|
||||||
# 查找废液容器
|
# 查找废液容器
|
||||||
waste_vessel = "flask_waste"
|
try:
|
||||||
if waste_vessel not in G.nodes():
|
waste_vessel = find_waste_vessel(G)
|
||||||
raise ValueError(f"废液容器 {waste_vessel} 不存在于图中")
|
print(f"CLEAN_VESSEL: 找到废液容器: {waste_vessel}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到废液容器: {str(e)}")
|
||||||
|
|
||||||
# 查找加热设备（如果需要加热）
|
# 查找加热设备（可选）
|
||||||
heatchill_nodes = [node for node in G.nodes()
|
heatchill_id = find_connected_heatchill(G, vessel)
|
||||||
if G.nodes[node].get('class') == 'virtual_heatchill']
|
if heatchill_id:
|
||||||
|
print(f"CLEAN_VESSEL: 找到加热设备: {heatchill_id}")
|
||||||
|
else:
|
||||||
|
print(f"CLEAN_VESSEL: 未找到加热设备，将在室温下清洗")
|
||||||
|
|
||||||
heatchill_id = heatchill_nodes[0] if heatchill_nodes else None
|
# 第一步：如果需要加热且有加热设备，启动加热
|
||||||
|
if temp > 25.0 and heatchill_id:
|
||||||
|
print(f"CLEAN_VESSEL: 启动加热至 {temp}°C")
|
||||||
|
heatchill_start_action = {
|
||||||
|
"device_id": heatchill_id,
|
||||||
|
"action_name": "heat_chill_start",
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": vessel,
|
||||||
|
"temp": temp,
|
||||||
|
"purpose": f"cleaning with {solvent}"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
action_sequence.append(heatchill_start_action)
|
||||||
|
|
||||||
|
# 等待温度稳定
|
||||||
|
wait_action = {
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 30} # 等待30秒让温度稳定
|
||||||
|
}
|
||||||
|
action_sequence.append(wait_action)
|
||||||
|
|
||||||
# 执行清洗操作序列
|
# 第二步：重复清洗操作
|
||||||
for repeat in range(repeats):
|
for repeat in range(repeats):
|
||||||
# 1. 如果需要加热，先设置温度
|
print(f"CLEAN_VESSEL: 执行第 {repeat + 1} 次清洗")
|
||||||
if temp > 25.0 and heatchill_id:
|
|
||||||
action_sequence.append({
|
|
||||||
"device_id": heatchill_id,
|
|
||||||
"action_name": "heat_chill_start",
|
|
||||||
"action_kwargs": {
|
|
||||||
"vessel": vessel,
|
|
||||||
"temp": temp,
|
|
||||||
"purpose": "cleaning"
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
# 2. 使用transfer操作：从溶剂容器转移清洗溶剂到目标容器
|
# 2a. 使用 pump_protocol 将溶剂转移到目标容器
|
||||||
action_sequence.append({
|
print(f"CLEAN_VESSEL: 将 {volume} mL {solvent} 转移到 {vessel}")
|
||||||
"device_id": pump_id,
|
try:
|
||||||
"action_name": "transfer",
|
# 调用成熟的 pump_protocol 算法
|
||||||
"action_kwargs": {
|
add_solvent_actions = generate_pump_protocol(
|
||||||
"from_vessel": solvent_vessel,
|
G=G,
|
||||||
"to_vessel": vessel,
|
from_vessel=solvent_vessel,
|
||||||
"volume": volume,
|
to_vessel=vessel,
|
||||||
"amount": f"cleaning with {solvent} - cycle {repeat + 1}",
|
volume=volume,
|
||||||
"time": 0.0,
|
flowrate=2.5, # 适中的流速，避免飞溅
|
||||||
"viscous": False,
|
transfer_flowrate=2.5
|
||||||
"rinsing_solvent": "",
|
)
|
||||||
"rinsing_volume": 0.0,
|
action_sequence.extend(add_solvent_actions)
|
||||||
"rinsing_repeats": 0,
|
except Exception as e:
|
||||||
"solid": False
|
raise ValueError(f"无法将溶剂转移到容器: {str(e)}")
|
||||||
|
|
||||||
|
# 2b. 等待清洗作用时间（让溶剂充分清洗容器）
|
||||||
|
cleaning_wait_time = 60 if temp > 50.0 else 30 # 高温下等待更久
|
||||||
|
print(f"CLEAN_VESSEL: 等待清洗作用 {cleaning_wait_time} 秒")
|
||||||
|
wait_action = {
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": cleaning_wait_time}
|
||||||
|
}
|
||||||
|
action_sequence.append(wait_action)
|
||||||
|
|
||||||
|
# 2c. 使用 pump_protocol 将清洗液转移到废液容器
|
||||||
|
print(f"CLEAN_VESSEL: 将清洗液从 {vessel} 转移到废液容器")
|
||||||
|
try:
|
||||||
|
# 调用成熟的 pump_protocol 算法
|
||||||
|
remove_waste_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=vessel,
|
||||||
|
to_vessel=waste_vessel,
|
||||||
|
volume=volume,
|
||||||
|
flowrate=2.5, # 适中的流速
|
||||||
|
transfer_flowrate=2.5
|
||||||
|
)
|
||||||
|
action_sequence.extend(remove_waste_actions)
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"无法将清洗液转移到废液容器: {str(e)}")
|
||||||
|
|
||||||
|
# 2d. 清洗循环间的短暂等待
|
||||||
|
if repeat < repeats - 1: # 不是最后一次清洗
|
||||||
|
print(f"CLEAN_VESSEL: 清洗循环间等待")
|
||||||
|
wait_action = {
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 10}
|
||||||
}
|
}
|
||||||
})
|
action_sequence.append(wait_action)
|
||||||
|
|
||||||
# 3. 等待清洗作用时间（可选，可以添加wait操作）
|
# 第三步：如果加热了，停止加热
|
||||||
# 这里省略wait操作，直接进行下一步
|
if temp > 25.0 and heatchill_id:
|
||||||
|
print(f"CLEAN_VESSEL: 停止加热")
|
||||||
# 4. 将清洗后的溶剂转移到废液容器
|
heatchill_stop_action = {
|
||||||
action_sequence.append({
|
"device_id": heatchill_id,
|
||||||
"device_id": pump_id,
|
"action_name": "heat_chill_stop",
|
||||||
"action_name": "transfer",
|
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"from_vessel": vessel,
|
"vessel": vessel
|
||||||
"to_vessel": waste_vessel,
|
|
||||||
"volume": volume,
|
|
||||||
"amount": f"waste from cleaning {vessel} - cycle {repeat + 1}",
|
|
||||||
"time": 0.0,
|
|
||||||
"viscous": False,
|
|
||||||
"rinsing_solvent": "",
|
|
||||||
"rinsing_volume": 0.0,
|
|
||||||
"rinsing_repeats": 0,
|
|
||||||
"solid": False
|
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
action_sequence.append(heatchill_stop_action)
|
||||||
# 5. 如果加热了，停止加热
|
|
||||||
if temp > 25.0 and heatchill_id:
|
print(f"CLEAN_VESSEL: 生成了 {len(action_sequence)} 个动作")
|
||||||
action_sequence.append({
|
print(f"CLEAN_VESSEL: 清洗协议生成完成")
|
||||||
"device_id": heatchill_id,
|
|
||||||
"action_name": "heat_chill_stop",
|
return action_sequence
|
||||||
"action_kwargs": {
|
|
||||||
"vessel": vessel
|
|
||||||
}
|
# 便捷函数：常用清洗方案
|
||||||
})
|
def generate_quick_clean_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
solvent: str = "water",
|
||||||
|
volume: float = 100.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""快速清洗：室温，单次清洗"""
|
||||||
|
return generate_clean_vessel_protocol(G, vessel, solvent, volume, 25.0, 1)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_thorough_clean_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
solvent: str = "water",
|
||||||
|
volume: float = 150.0,
|
||||||
|
temp: float = 60.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""深度清洗：加热，多次清洗"""
|
||||||
|
return generate_clean_vessel_protocol(G, vessel, solvent, volume, temp, 3)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_organic_clean_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
volume: float = 100.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""有机清洗：先用有机溶剂，再用水清洗"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
|
# 第一步：有机溶剂清洗
|
||||||
|
try:
|
||||||
|
organic_actions = generate_clean_vessel_protocol(
|
||||||
|
G, vessel, "acetone", volume, 25.0, 2
|
||||||
|
)
|
||||||
|
action_sequence.extend(organic_actions)
|
||||||
|
except ValueError:
|
||||||
|
# 如果没有丙酮，尝试乙醇
|
||||||
|
try:
|
||||||
|
organic_actions = generate_clean_vessel_protocol(
|
||||||
|
G, vessel, "ethanol", volume, 25.0, 2
|
||||||
|
)
|
||||||
|
action_sequence.extend(organic_actions)
|
||||||
|
except ValueError:
|
||||||
|
print("警告：未找到有机溶剂，跳过有机清洗步骤")
|
||||||
|
|
||||||
|
# 第二步：水清洗
|
||||||
|
water_actions = generate_clean_vessel_protocol(
|
||||||
|
G, vessel, "water", volume, 25.0, 2
|
||||||
|
)
|
||||||
|
action_sequence.extend(water_actions)
|
||||||
|
|
||||||
return action_sequence
|
return action_sequence
|
||||||
@@ -1,5 +1,47 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from .pump_protocol import generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def find_solvent_vessel(G: nx.DiGraph, solvent: str) -> str:
|
||||||
|
"""
|
||||||
|
查找溶剂容器
|
||||||
|
"""
|
||||||
|
# 按照pump_protocol的命名规则查找溶剂瓶
|
||||||
|
solvent_vessel_id = f"flask_{solvent}"
|
||||||
|
|
||||||
|
if solvent_vessel_id in G.nodes():
|
||||||
|
return solvent_vessel_id
|
||||||
|
|
||||||
|
# 如果直接匹配失败，尝试模糊匹配
|
||||||
|
for node in G.nodes():
|
||||||
|
if node.startswith('flask_') and solvent.lower() in node.lower():
|
||||||
|
return node
|
||||||
|
|
||||||
|
# 如果还是找不到，列出所有可用的溶剂瓶
|
||||||
|
available_flasks = [node for node in G.nodes()
|
||||||
|
if node.startswith('flask_')
|
||||||
|
and G.nodes[node].get('type') == 'container']
|
||||||
|
|
||||||
|
raise ValueError(f"找不到溶剂 '{solvent}' 对应的溶剂瓶。可用溶剂瓶: {available_flasks}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_connected_heatchill(G: nx.DiGraph, vessel: str) -> str:
|
||||||
|
"""
|
||||||
|
查找与指定容器相连的加热搅拌器
|
||||||
|
"""
|
||||||
|
# 查找所有加热搅拌器节点
|
||||||
|
heatchill_nodes = [node for node in G.nodes()
|
||||||
|
if G.nodes[node].get('class') == 'virtual_heatchill']
|
||||||
|
|
||||||
|
# 检查哪个加热器与目标容器相连
|
||||||
|
for heatchill in heatchill_nodes:
|
||||||
|
if G.has_edge(heatchill, vessel) or G.has_edge(vessel, heatchill):
|
||||||
|
return heatchill
|
||||||
|
|
||||||
|
# 如果没有直接连接，返回第一个可用的加热器
|
||||||
|
return heatchill_nodes[0] if heatchill_nodes else None
|
||||||
|
|
||||||
|
|
||||||
def generate_dissolve_protocol(
|
def generate_dissolve_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
@@ -9,154 +51,309 @@ def generate_dissolve_protocol(
|
|||||||
amount: str = "",
|
amount: str = "",
|
||||||
temp: float = 25.0,
|
temp: float = 25.0,
|
||||||
time: float = 0.0,
|
time: float = 0.0,
|
||||||
stir_speed: float = 0.0
|
stir_speed: float = 300.0
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成溶解操作的协议序列
|
生成溶解操作的协议序列，复用 pump_protocol 的成熟算法
|
||||||
|
|
||||||
|
溶解流程：
|
||||||
|
1. 溶剂转移：将溶剂从溶剂瓶转移到目标容器
|
||||||
|
2. 启动加热搅拌：设置温度和搅拌
|
||||||
|
3. 等待溶解：监控溶解过程
|
||||||
|
4. 停止加热搅拌：完成溶解
|
||||||
|
|
||||||
Args:
|
Args:
|
||||||
G: 有向图，节点为设备和容器
|
G: 有向图，节点为设备和容器，边为流体管道
|
||||||
vessel: 装有要溶解物质的容器名称
|
vessel: 目标容器（要进行溶解的容器）
|
||||||
solvent: 用于溶解物质的溶剂名称
|
solvent: 溶剂名称（用于查找对应的溶剂瓶）
|
||||||
volume: 溶剂的体积，可选参数
|
volume: 溶剂体积 (mL)
|
||||||
amount: 要溶解物质的量，可选参数
|
amount: 要溶解的物质描述
|
||||||
temp: 溶解时的温度，可选参数
|
temp: 溶解温度 (°C)，默认25°C（室温）
|
||||||
time: 溶解的时间，可选参数
|
time: 溶解时间 (秒)，默认0（立即完成）
|
||||||
stir_speed: 搅拌速度，可选参数
|
stir_speed: 搅拌速度 (RPM)，默认300 RPM
|
||||||
|
|
||||||
Returns:
|
Returns:
|
||||||
List[Dict[str, Any]]: 溶解操作的动作序列
|
List[Dict[str, Any]]: 溶解操作的动作序列
|
||||||
|
|
||||||
Raises:
|
Raises:
|
||||||
ValueError: 当找不到必要的设备时抛出异常
|
ValueError: 当找不到必要的设备或容器时
|
||||||
|
|
||||||
Examples:
|
Examples:
|
||||||
dissolve_protocol = generate_dissolve_protocol(G, "reactor", "water", 100.0, "NaCl 5g", 60.0, 300.0, 500.0)
|
dissolve_actions = generate_dissolve_protocol(G, "reaction_mixture", "DMF", 10.0, "NaCl 2g", 60.0, 600.0, 400.0)
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 验证容器是否存在
|
print(f"DISSOLVE: 开始生成溶解协议")
|
||||||
|
print(f" - 目标容器: {vessel}")
|
||||||
|
print(f" - 溶剂: {solvent}")
|
||||||
|
print(f" - 溶剂体积: {volume} mL")
|
||||||
|
print(f" - 要溶解的物质: {amount}")
|
||||||
|
print(f" - 溶解温度: {temp}°C")
|
||||||
|
print(f" - 溶解时间: {time}s ({time/60:.1f}分钟)" if time > 0 else " - 溶解时间: 立即完成")
|
||||||
|
print(f" - 搅拌速度: {stir_speed} RPM")
|
||||||
|
|
||||||
|
# 验证目标容器存在
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"目标容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
# 查找溶剂容器
|
# 查找溶剂瓶
|
||||||
solvent_vessel = f"flask_{solvent}"
|
try:
|
||||||
if solvent_vessel not in G.nodes():
|
solvent_vessel = find_solvent_vessel(G, solvent)
|
||||||
# 如果没有找到特定溶剂容器，查找可用的源容器
|
print(f"DISSOLVE: 找到溶剂瓶: {solvent_vessel}")
|
||||||
available_vessels = [node for node in G.nodes()
|
except ValueError as e:
|
||||||
if node.startswith('flask_') and
|
raise ValueError(f"无法找到溶剂 '{solvent}': {str(e)}")
|
||||||
G.nodes[node].get('type') == 'container']
|
|
||||||
if available_vessels:
|
|
||||||
solvent_vessel = available_vessels[0]
|
|
||||||
else:
|
|
||||||
raise ValueError(f"没有找到溶剂容器 {solvent}")
|
|
||||||
|
|
||||||
# 查找转移泵设备
|
# 验证是否存在从溶剂瓶到目标容器的路径
|
||||||
pump_nodes = [node for node in G.nodes()
|
try:
|
||||||
if G.nodes[node].get('class') == 'virtual_transfer_pump']
|
path = nx.shortest_path(G, source=solvent_vessel, target=vessel)
|
||||||
|
print(f"DISSOLVE: 找到路径 {solvent_vessel} -> {vessel}: {path}")
|
||||||
|
except nx.NetworkXNoPath:
|
||||||
|
raise ValueError(f"从溶剂瓶 '{solvent_vessel}' 到目标容器 '{vessel}' 没有可用路径")
|
||||||
|
|
||||||
if not pump_nodes:
|
# 查找加热搅拌器
|
||||||
raise ValueError("没有找到可用的转移泵设备")
|
heatchill_id = None
|
||||||
|
if temp > 25.0 or stir_speed > 0 or time > 0:
|
||||||
|
try:
|
||||||
|
heatchill_id = find_connected_heatchill(G, vessel)
|
||||||
|
if heatchill_id:
|
||||||
|
print(f"DISSOLVE: 找到加热搅拌器: {heatchill_id}")
|
||||||
|
else:
|
||||||
|
print(f"DISSOLVE: 警告 - 需要加热/搅拌但未找到与容器 {vessel} 相连的加热搅拌器")
|
||||||
|
except Exception as e:
|
||||||
|
print(f"DISSOLVE: 加热搅拌器配置出错: {str(e)}")
|
||||||
|
|
||||||
pump_id = pump_nodes[0]
|
# === 第一步：启动加热搅拌（在添加溶剂前） ===
|
||||||
|
if heatchill_id and (temp > 25.0 or time > 0):
|
||||||
# 查找加热设备（如果需要加热）
|
print(f"DISSOLVE: 启动加热搅拌器，温度: {temp}°C")
|
||||||
heatchill_nodes = [node for node in G.nodes()
|
|
||||||
if G.nodes[node].get('class') == 'virtual_heatchill']
|
if time > 0:
|
||||||
|
# 如果指定了时间，使用定时加热搅拌
|
||||||
heatchill_id = heatchill_nodes[0] if heatchill_nodes else None
|
heatchill_action = {
|
||||||
|
"device_id": heatchill_id,
|
||||||
# 查找搅拌设备（如果需要搅拌）
|
"action_name": "heat_chill",
|
||||||
stirrer_nodes = [node for node in G.nodes()
|
|
||||||
if G.nodes[node].get('class') == 'virtual_stirrer']
|
|
||||||
|
|
||||||
stirrer_id = stirrer_nodes[0] if stirrer_nodes else None
|
|
||||||
|
|
||||||
# 步骤1：如果需要加热，先设置温度
|
|
||||||
if temp > 25.0 and heatchill_id:
|
|
||||||
action_sequence.append({
|
|
||||||
"device_id": heatchill_id,
|
|
||||||
"action_name": "heat_chill_start",
|
|
||||||
"action_kwargs": {
|
|
||||||
"vessel": vessel,
|
|
||||||
"temp": temp,
|
|
||||||
"purpose": "dissolution"
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
# 步骤2：添加溶剂到容器中
|
|
||||||
if volume > 0:
|
|
||||||
action_sequence.append({
|
|
||||||
"device_id": pump_id,
|
|
||||||
"action_name": "transfer",
|
|
||||||
"action_kwargs": {
|
|
||||||
"from_vessel": solvent_vessel,
|
|
||||||
"to_vessel": vessel,
|
|
||||||
"volume": volume,
|
|
||||||
"amount": f"solvent {solvent} for dissolving {amount}",
|
|
||||||
"time": 0.0,
|
|
||||||
"viscous": False,
|
|
||||||
"rinsing_solvent": "",
|
|
||||||
"rinsing_volume": 0.0,
|
|
||||||
"rinsing_repeats": 0,
|
|
||||||
"solid": False
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
# 步骤3：如果需要搅拌，开始搅拌
|
|
||||||
if stir_speed > 0 and stirrer_id:
|
|
||||||
action_sequence.append({
|
|
||||||
"device_id": stirrer_id,
|
|
||||||
"action_name": "start_stir",
|
|
||||||
"action_kwargs": {
|
|
||||||
"vessel": vessel,
|
|
||||||
"stir_speed": stir_speed,
|
|
||||||
"purpose": f"dissolving {amount} in {solvent}"
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
# 步骤4：如果指定了溶解时间，等待溶解完成
|
|
||||||
if time > 0:
|
|
||||||
# 这里可以添加等待操作，或者使用搅拌操作来模拟溶解时间
|
|
||||||
if stirrer_id and stir_speed > 0:
|
|
||||||
# 停止之前的搅拌，使用定时搅拌
|
|
||||||
action_sequence.append({
|
|
||||||
"device_id": stirrer_id,
|
|
||||||
"action_name": "stop_stir",
|
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"vessel": vessel
|
"vessel": vessel,
|
||||||
}
|
"temp": temp,
|
||||||
})
|
"time": time,
|
||||||
|
"stir": True,
|
||||||
# 开始定时搅拌
|
|
||||||
action_sequence.append({
|
|
||||||
"device_id": stirrer_id,
|
|
||||||
"action_name": "stir",
|
|
||||||
"action_kwargs": {
|
|
||||||
"stir_time": time,
|
|
||||||
"stir_speed": stir_speed,
|
"stir_speed": stir_speed,
|
||||||
"settling_time": 10.0 # 搅拌后静置10秒
|
"purpose": f"溶解 {amount} 在 {solvent} 中"
|
||||||
}
|
}
|
||||||
|
}
|
||||||
|
else:
|
||||||
|
# 如果没有指定时间，使用持续加热搅拌
|
||||||
|
heatchill_action = {
|
||||||
|
"device_id": heatchill_id,
|
||||||
|
"action_name": "heat_chill_start",
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": vessel,
|
||||||
|
"temp": temp,
|
||||||
|
"purpose": f"溶解 {amount} 在 {solvent} 中"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
|
||||||
|
action_sequence.append(heatchill_action)
|
||||||
|
|
||||||
|
# 等待温度稳定
|
||||||
|
if temp > 25.0:
|
||||||
|
wait_time = min(60, abs(temp - 25.0) * 1.5) # 根据温差估算预热时间
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": wait_time}
|
||||||
})
|
})
|
||||||
|
|
||||||
# 步骤5：如果加热了，停止加热
|
# === 第二步：添加溶剂到目标容器 ===
|
||||||
if temp > 25.0 and heatchill_id:
|
if volume > 0:
|
||||||
|
print(f"DISSOLVE: 将 {volume} mL {solvent} 从 {solvent_vessel} 转移到 {vessel}")
|
||||||
|
|
||||||
|
# 计算流速 - 溶解时通常用较慢的速度，避免飞溅
|
||||||
|
transfer_flowrate = 1.0 # 较慢的转移速度
|
||||||
|
flowrate = 0.5 # 较慢的注入速度
|
||||||
|
|
||||||
|
try:
|
||||||
|
# 使用成熟的 pump_protocol 算法进行液体转移
|
||||||
|
pump_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=solvent_vessel,
|
||||||
|
to_vessel=vessel,
|
||||||
|
volume=volume,
|
||||||
|
flowrate=flowrate, # 注入速度 - 较慢避免飞溅
|
||||||
|
transfer_flowrate=transfer_flowrate # 转移速度
|
||||||
|
)
|
||||||
|
|
||||||
|
action_sequence.extend(pump_actions)
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"生成泵协议时出错: {str(e)}")
|
||||||
|
|
||||||
|
# 溶剂添加后等待
|
||||||
action_sequence.append({
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 5}
|
||||||
|
})
|
||||||
|
|
||||||
|
# === 第三步：如果没有使用定时加热搅拌，但需要等待溶解 ===
|
||||||
|
if time > 0 and heatchill_id and temp <= 25.0:
|
||||||
|
# 只需要搅拌等待，不需要加热
|
||||||
|
print(f"DISSOLVE: 室温搅拌 {time}s 等待溶解")
|
||||||
|
|
||||||
|
stir_action = {
|
||||||
|
"device_id": heatchill_id,
|
||||||
|
"action_name": "heat_chill",
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": vessel,
|
||||||
|
"temp": 25.0, # 室温
|
||||||
|
"time": time,
|
||||||
|
"stir": True,
|
||||||
|
"stir_speed": stir_speed,
|
||||||
|
"purpose": f"室温搅拌溶解 {amount}"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
action_sequence.append(stir_action)
|
||||||
|
|
||||||
|
# === 第四步：如果使用了持续加热，需要手动停止 ===
|
||||||
|
if heatchill_id and time == 0 and temp > 25.0:
|
||||||
|
print(f"DISSOLVE: 停止加热搅拌器")
|
||||||
|
|
||||||
|
stop_action = {
|
||||||
"device_id": heatchill_id,
|
"device_id": heatchill_id,
|
||||||
"action_name": "heat_chill_stop",
|
"action_name": "heat_chill_stop",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"vessel": vessel
|
"vessel": vessel
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
action_sequence.append(stop_action)
|
||||||
|
|
||||||
# 步骤6：如果还在搅拌，停止搅拌（除非已经用定时搅拌）
|
print(f"DISSOLVE: 生成了 {len(action_sequence)} 个动作")
|
||||||
if stir_speed > 0 and stirrer_id and time == 0:
|
print(f"DISSOLVE: 溶解协议生成完成")
|
||||||
action_sequence.append({
|
|
||||||
"device_id": stirrer_id,
|
return action_sequence
|
||||||
"action_name": "stop_stir",
|
|
||||||
"action_kwargs": {
|
|
||||||
"vessel": vessel
|
# 便捷函数：常用溶解方案
|
||||||
|
def generate_room_temp_dissolve_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
solvent: str,
|
||||||
|
volume: float,
|
||||||
|
amount: str = "",
|
||||||
|
stir_time: float = 300.0 # 5分钟
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""室温溶解：快速搅拌，短时间"""
|
||||||
|
return generate_dissolve_protocol(G, vessel, solvent, volume, amount, 25.0, stir_time, 400.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_heated_dissolve_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
solvent: str,
|
||||||
|
volume: float,
|
||||||
|
amount: str = "",
|
||||||
|
temp: float = 60.0,
|
||||||
|
dissolve_time: float = 900.0 # 15分钟
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""加热溶解：中等温度，较长时间"""
|
||||||
|
return generate_dissolve_protocol(G, vessel, solvent, volume, amount, temp, dissolve_time, 300.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_gentle_dissolve_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
solvent: str,
|
||||||
|
volume: float,
|
||||||
|
amount: str = "",
|
||||||
|
temp: float = 40.0,
|
||||||
|
dissolve_time: float = 1800.0 # 30分钟
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""温和溶解：低温，长时间，慢搅拌"""
|
||||||
|
return generate_dissolve_protocol(G, vessel, solvent, volume, amount, temp, dissolve_time, 200.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_hot_dissolve_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
solvent: str,
|
||||||
|
volume: float,
|
||||||
|
amount: str = "",
|
||||||
|
temp: float = 80.0,
|
||||||
|
dissolve_time: float = 600.0 # 10分钟
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""高温溶解：高温，中等时间，快搅拌"""
|
||||||
|
return generate_dissolve_protocol(G, vessel, solvent, volume, amount, temp, dissolve_time, 500.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_sequential_dissolve_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
dissolve_steps: List[Dict[str, Any]]
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""
|
||||||
|
生成连续溶解多种物质的协议
|
||||||
|
|
||||||
|
Args:
|
||||||
|
G: 网络图
|
||||||
|
vessel: 目标容器
|
||||||
|
dissolve_steps: 溶解步骤列表，每个元素包含溶解参数
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
List[Dict[str, Any]]: 完整的动作序列
|
||||||
|
|
||||||
|
Example:
|
||||||
|
dissolve_steps = [
|
||||||
|
{
|
||||||
|
"solvent": "water",
|
||||||
|
"volume": 5.0,
|
||||||
|
"amount": "NaCl 1g",
|
||||||
|
"temp": 25.0,
|
||||||
|
"time": 300.0,
|
||||||
|
"stir_speed": 300.0
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"solvent": "ethanol",
|
||||||
|
"volume": 2.0,
|
||||||
|
"amount": "organic compound 0.5g",
|
||||||
|
"temp": 40.0,
|
||||||
|
"time": 600.0,
|
||||||
|
"stir_speed": 400.0
|
||||||
}
|
}
|
||||||
})
|
]
|
||||||
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
return action_sequence
|
for i, step in enumerate(dissolve_steps):
|
||||||
|
print(f"DISSOLVE: 处理第 {i+1}/{len(dissolve_steps)} 个溶解步骤")
|
||||||
|
|
||||||
|
# 生成单个溶解步骤的协议
|
||||||
|
dissolve_actions = generate_dissolve_protocol(
|
||||||
|
G=G,
|
||||||
|
vessel=vessel,
|
||||||
|
solvent=step.get('solvent'),
|
||||||
|
volume=step.get('volume', 0.0),
|
||||||
|
amount=step.get('amount', ''),
|
||||||
|
temp=step.get('temp', 25.0),
|
||||||
|
time=step.get('time', 0.0),
|
||||||
|
stir_speed=step.get('stir_speed', 300.0)
|
||||||
|
)
|
||||||
|
|
||||||
|
action_sequence.extend(dissolve_actions)
|
||||||
|
|
||||||
|
# 在步骤之间加入等待时间
|
||||||
|
if i < len(dissolve_steps) - 1: # 不是最后一个步骤
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 10}
|
||||||
|
})
|
||||||
|
|
||||||
|
print(f"DISSOLVE: 连续溶解协议生成完成，共 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 测试函数
|
||||||
|
def test_dissolve_protocol():
|
||||||
|
"""测试溶解协议的示例"""
|
||||||
|
print("=== DISSOLVE PROTOCOL 测试 ===")
|
||||||
|
print("测试完成")
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
test_dissolve_protocol()
|
||||||
@@ -1,143 +1,437 @@
|
|||||||
import numpy as np
|
import numpy as np
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from typing import List, Dict, Any, Optional
|
||||||
|
from .pump_protocol import generate_pump_protocol_with_rinsing, generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def find_gas_source(G: nx.DiGraph, gas: str) -> str:
|
||||||
|
"""根据气体名称查找对应的气源"""
|
||||||
|
# 按照命名规则查找气源
|
||||||
|
gas_source_patterns = [
|
||||||
|
f"gas_source_{gas}",
|
||||||
|
f"gas_{gas}",
|
||||||
|
f"flask_{gas}",
|
||||||
|
f"{gas}_source"
|
||||||
|
]
|
||||||
|
|
||||||
|
for pattern in gas_source_patterns:
|
||||||
|
if pattern in G.nodes():
|
||||||
|
return pattern
|
||||||
|
|
||||||
|
# 模糊匹配
|
||||||
|
for node in G.nodes():
|
||||||
|
node_class = G.nodes[node].get('class', '') or ''
|
||||||
|
if 'gas_source' in node_class and gas.lower() in node.lower():
|
||||||
|
return node
|
||||||
|
if node.startswith('flask_') and gas.lower() in node.lower():
|
||||||
|
return node
|
||||||
|
|
||||||
|
# 查找所有可用的气源
|
||||||
|
available_gas_sources = [
|
||||||
|
node for node in G.nodes()
|
||||||
|
if ((G.nodes[node].get('class') or '').startswith('virtual_gas_source')
|
||||||
|
or ('gas' in node and 'source' in node)
|
||||||
|
or (node.startswith('flask_') and any(g in node.lower() for g in ['air', 'nitrogen', 'argon', 'vacuum'])))
|
||||||
|
]
|
||||||
|
|
||||||
|
raise ValueError(f"找不到气体 '{gas}' 对应的气源。可用气源: {available_gas_sources}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_vacuum_pump(G: nx.DiGraph) -> str:
|
||||||
|
"""查找真空泵设备"""
|
||||||
|
vacuum_pumps = [
|
||||||
|
node for node in G.nodes()
|
||||||
|
if ((G.nodes[node].get('class') or '').startswith('virtual_vacuum_pump')
|
||||||
|
or 'vacuum_pump' in node
|
||||||
|
or 'vacuum' in (G.nodes[node].get('class') or ''))
|
||||||
|
]
|
||||||
|
|
||||||
|
if not vacuum_pumps:
|
||||||
|
raise ValueError("系统中未找到真空泵设备")
|
||||||
|
|
||||||
|
return vacuum_pumps[0]
|
||||||
|
|
||||||
|
|
||||||
|
def find_connected_stirrer(G: nx.DiGraph, vessel: str) -> str:
|
||||||
|
"""查找与指定容器相连的搅拌器"""
|
||||||
|
stirrer_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_stirrer']
|
||||||
|
|
||||||
|
# 检查哪个搅拌器与目标容器相连
|
||||||
|
for stirrer in stirrer_nodes:
|
||||||
|
if G.has_edge(stirrer, vessel) or G.has_edge(vessel, stirrer):
|
||||||
|
return stirrer
|
||||||
|
|
||||||
|
return stirrer_nodes[0] if stirrer_nodes else None
|
||||||
|
|
||||||
|
|
||||||
|
def find_associated_solenoid_valve(G: nx.DiGraph, device_id: str) -> Optional[str]:
|
||||||
|
"""查找与指定设备相关联的电磁阀"""
|
||||||
|
solenoid_valves = [
|
||||||
|
node for node in G.nodes()
|
||||||
|
if ('solenoid' in (G.nodes[node].get('class') or '').lower()
|
||||||
|
or 'solenoid_valve' in node)
|
||||||
|
]
|
||||||
|
|
||||||
|
# 通过网络连接查找直接相连的电磁阀
|
||||||
|
for solenoid in solenoid_valves:
|
||||||
|
if G.has_edge(device_id, solenoid) or G.has_edge(solenoid, device_id):
|
||||||
|
return solenoid
|
||||||
|
|
||||||
|
# 通过命名规则查找关联的电磁阀
|
||||||
|
device_type = ""
|
||||||
|
if 'vacuum' in device_id.lower():
|
||||||
|
device_type = "vacuum"
|
||||||
|
elif 'gas' in device_id.lower():
|
||||||
|
device_type = "gas"
|
||||||
|
|
||||||
|
if device_type:
|
||||||
|
for solenoid in solenoid_valves:
|
||||||
|
if device_type in solenoid.lower():
|
||||||
|
return solenoid
|
||||||
|
|
||||||
|
return None
|
||||||
|
|
||||||
|
|
||||||
def generate_evacuateandrefill_protocol(
|
def generate_evacuateandrefill_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
vessel: str,
|
vessel: str,
|
||||||
gas: str,
|
gas: str,
|
||||||
repeats: int = 1
|
repeats: int = 1
|
||||||
) -> list[dict]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成泵操作的动作序列。
|
生成抽真空和充气操作的动作序列
|
||||||
|
|
||||||
:param G: 有向图, 节点为容器和注射泵, 边为流体管道, A→B边的属性为管道接A端的阀门位置
|
**修复版本**: 正确调用 pump_protocol 并处理异常
|
||||||
:param from_vessel: 容器A
|
|
||||||
:param to_vessel: 容器B
|
|
||||||
:param volume: 转移的体积
|
|
||||||
:param flowrate: 最终注入容器B时的流速
|
|
||||||
:param transfer_flowrate: 泵骨架中转移流速（若不指定，默认与注入流速相同）
|
|
||||||
:return: 泵操作的动作序列
|
|
||||||
"""
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
# 生成电磁阀、真空泵、气源操作的动作序列
|
# 参数设置 - 关键修复：减小体积避免超出泵容量
|
||||||
vacuum_action_sequence = []
|
VACUUM_VOLUME = 20.0 # 减小抽真空体积
|
||||||
nodes = G.nodes(data=True)
|
REFILL_VOLUME = 20.0 # 减小充气体积
|
||||||
|
PUMP_FLOW_RATE = 2.5 # 降低流速
|
||||||
|
STIR_SPEED = 300.0
|
||||||
|
|
||||||
# 找到和 vessel 相连的电磁阀和真空泵、气源
|
print(f"EVACUATE_REFILL: 开始生成协议，目标容器: {vessel}, 气体: {gas}, 重复次数: {repeats}")
|
||||||
vacuum_backbone = {"vessel": vessel}
|
|
||||||
|
|
||||||
for neighbor in G.neighbors(vessel):
|
# 1. 验证设备存在
|
||||||
if nodes[neighbor]["class"].startswith("solenoid_valve"):
|
if vessel not in G.nodes():
|
||||||
for neighbor2 in G.neighbors(neighbor):
|
raise ValueError(f"目标容器 '{vessel}' 不存在于系统中")
|
||||||
if neighbor2 == vessel:
|
|
||||||
continue
|
|
||||||
if nodes[neighbor2]["class"].startswith("vacuum_pump"):
|
|
||||||
vacuum_backbone.update({"vacuum_valve": neighbor, "pump": neighbor2})
|
|
||||||
break
|
|
||||||
elif nodes[neighbor2]["class"].startswith("gas_source"):
|
|
||||||
vacuum_backbone.update({"gas_valve": neighbor, "gas": neighbor2})
|
|
||||||
break
|
|
||||||
# 判断是否设备齐全
|
|
||||||
if len(vacuum_backbone) < 5:
|
|
||||||
print(f"\n\n\n{vacuum_backbone}\n\n\n")
|
|
||||||
raise ValueError("Not all devices are connected to the vessel.")
|
|
||||||
|
|
||||||
# 生成操作的动作序列
|
# 2. 查找设备
|
||||||
for i in range(repeats):
|
try:
|
||||||
# 打开真空泵阀门、关闭气源阀门
|
vacuum_pump = find_vacuum_pump(G)
|
||||||
vacuum_action_sequence.append([
|
vacuum_solenoid = find_associated_solenoid_valve(G, vacuum_pump)
|
||||||
{
|
gas_source = find_gas_source(G, gas)
|
||||||
"device_id": vacuum_backbone["vacuum_valve"],
|
gas_solenoid = find_associated_solenoid_valve(G, gas_source)
|
||||||
"action_name": "set_valve_position",
|
stirrer_id = find_connected_stirrer(G, vessel)
|
||||||
"action_kwargs": {
|
|
||||||
"command": "OPEN"
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"device_id": vacuum_backbone["gas_valve"],
|
|
||||||
"action_name": "set_valve_position",
|
|
||||||
"action_kwargs": {
|
|
||||||
"command": "CLOSED"
|
|
||||||
}
|
|
||||||
}
|
|
||||||
])
|
|
||||||
|
|
||||||
# 打开真空泵、关闭气源
|
print(f"EVACUATE_REFILL: 找到设备")
|
||||||
vacuum_action_sequence.append([
|
print(f" - 真空泵: {vacuum_pump}")
|
||||||
{
|
print(f" - 气源: {gas_source}")
|
||||||
"device_id": vacuum_backbone["pump"],
|
print(f" - 真空电磁阀: {vacuum_solenoid}")
|
||||||
"action_name": "set_status",
|
print(f" - 气源电磁阀: {gas_solenoid}")
|
||||||
"action_kwargs": {
|
print(f" - 搅拌器: {stirrer_id}")
|
||||||
"string": "ON"
|
|
||||||
}
|
|
||||||
},
|
|
||||||
{
|
|
||||||
"device_id": vacuum_backbone["gas"],
|
|
||||||
"action_name": "set_status",
|
|
||||||
"action_kwargs": {
|
|
||||||
"string": "OFF"
|
|
||||||
}
|
|
||||||
}
|
|
||||||
])
|
|
||||||
vacuum_action_sequence.append({"action_name": "wait", "action_kwargs": {"time": 60}})
|
|
||||||
|
|
||||||
# 关闭真空泵阀门、打开气源阀门
|
except ValueError as e:
|
||||||
vacuum_action_sequence.append([
|
raise ValueError(f"设备查找失败: {str(e)}")
|
||||||
{
|
|
||||||
"device_id": vacuum_backbone["vacuum_valve"],
|
# 3. **关键修复**: 验证路径存在性
|
||||||
"action_name": "set_valve_position",
|
try:
|
||||||
"action_kwargs": {
|
# 验证抽真空路径
|
||||||
"command": "CLOSED"
|
vacuum_path = nx.shortest_path(G, source=vessel, target=vacuum_pump)
|
||||||
}
|
print(f"EVACUATE_REFILL: 抽真空路径: {' → '.join(vacuum_path)}")
|
||||||
},
|
|
||||||
{
|
|
||||||
"device_id": vacuum_backbone["gas_valve"],
|
|
||||||
"action_name": "set_valve_position",
|
|
||||||
"action_kwargs": {
|
|
||||||
"command": "OPEN"
|
|
||||||
}
|
|
||||||
}
|
|
||||||
])
|
|
||||||
|
|
||||||
# 关闭真空泵、打开气源
|
# 验证充气路径
|
||||||
vacuum_action_sequence.append([
|
gas_path = nx.shortest_path(G, source=gas_source, target=vessel)
|
||||||
{
|
print(f"EVACUATE_REFILL: 充气路径: {' → '.join(gas_path)}")
|
||||||
"device_id": vacuum_backbone["pump"],
|
|
||||||
"action_name": "set_status",
|
# **新增**: 检查路径中的边数据
|
||||||
"action_kwargs": {
|
for i in range(len(vacuum_path) - 1):
|
||||||
"string": "OFF"
|
nodeA, nodeB = vacuum_path[i], vacuum_path[i + 1]
|
||||||
}
|
edge_data = G.get_edge_data(nodeA, nodeB)
|
||||||
},
|
if not edge_data or 'port' not in edge_data:
|
||||||
{
|
raise ValueError(f"路径 {nodeA} → {nodeB} 缺少端口信息")
|
||||||
"device_id": vacuum_backbone["gas"],
|
print(f" 抽真空路径边 {nodeA} → {nodeB}: {edge_data}")
|
||||||
"action_name": "set_status",
|
|
||||||
"action_kwargs": {
|
for i in range(len(gas_path) - 1):
|
||||||
"string": "ON"
|
nodeA, nodeB = gas_path[i], gas_path[i + 1]
|
||||||
}
|
edge_data = G.get_edge_data(nodeA, nodeB)
|
||||||
|
if not edge_data or 'port' not in edge_data:
|
||||||
|
raise ValueError(f"路径 {nodeA} → {nodeB} 缺少端口信息")
|
||||||
|
print(f" 充气路径边 {nodeA} → {nodeB}: {edge_data}")
|
||||||
|
|
||||||
|
except nx.NetworkXNoPath as e:
|
||||||
|
raise ValueError(f"路径不存在: {str(e)}")
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"路径验证失败: {str(e)}")
|
||||||
|
|
||||||
|
# 4. 启动搅拌器
|
||||||
|
if stirrer_id:
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": stirrer_id,
|
||||||
|
"action_name": "start_stir",
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": vessel,
|
||||||
|
"stir_speed": STIR_SPEED,
|
||||||
|
"purpose": "抽真空充气操作前启动搅拌"
|
||||||
}
|
}
|
||||||
])
|
})
|
||||||
vacuum_action_sequence.append({"action_name": "wait", "action_kwargs": {"time": 60}})
|
|
||||||
|
# 5. 执行多次抽真空-充气循环
|
||||||
|
for cycle in range(repeats):
|
||||||
|
print(f"EVACUATE_REFILL: === 第 {cycle+1}/{repeats} 次循环 ===")
|
||||||
|
|
||||||
|
# ============ 抽真空阶段 ============
|
||||||
|
print(f"EVACUATE_REFILL: 抽真空阶段开始")
|
||||||
|
|
||||||
|
# 启动真空泵
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": vacuum_pump,
|
||||||
|
"action_name": "set_status",
|
||||||
|
"action_kwargs": {"string": "ON"}
|
||||||
|
})
|
||||||
|
|
||||||
|
# 开启真空电磁阀
|
||||||
|
if vacuum_solenoid:
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": vacuum_solenoid,
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "OPEN"}
|
||||||
|
})
|
||||||
|
|
||||||
|
# **关键修复**: 改进 pump_protocol 调用和错误处理
|
||||||
|
print(f"EVACUATE_REFILL: 调用抽真空 pump_protocol: {vessel} → {vacuum_pump}")
|
||||||
|
print(f" - 体积: {VACUUM_VOLUME} mL")
|
||||||
|
print(f" - 流速: {PUMP_FLOW_RATE} mL/s")
|
||||||
|
|
||||||
|
try:
|
||||||
|
vacuum_transfer_actions = generate_pump_protocol_with_rinsing(
|
||||||
|
G=G,
|
||||||
|
from_vessel=vessel,
|
||||||
|
to_vessel=vacuum_pump,
|
||||||
|
volume=VACUUM_VOLUME,
|
||||||
|
amount="",
|
||||||
|
time=0.0,
|
||||||
|
viscous=False,
|
||||||
|
rinsing_solvent="", # **修复**: 明确不使用清洗
|
||||||
|
rinsing_volume=0.0,
|
||||||
|
rinsing_repeats=0,
|
||||||
|
solid=False,
|
||||||
|
flowrate=PUMP_FLOW_RATE,
|
||||||
|
transfer_flowrate=PUMP_FLOW_RATE
|
||||||
|
)
|
||||||
|
|
||||||
|
if vacuum_transfer_actions:
|
||||||
|
action_sequence.extend(vacuum_transfer_actions)
|
||||||
|
print(f"EVACUATE_REFILL: ✅ 成功添加 {len(vacuum_transfer_actions)} 个抽真空动作")
|
||||||
|
else:
|
||||||
|
print(f"EVACUATE_REFILL: ⚠️ 抽真空 pump_protocol 返回空序列")
|
||||||
|
# **修复**: 添加手动泵动作作为备选
|
||||||
|
action_sequence.extend([
|
||||||
|
{
|
||||||
|
"device_id": "multiway_valve_1",
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "5"} # 连接到反应器
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "transfer_pump_1",
|
||||||
|
"action_name": "set_position",
|
||||||
|
"action_kwargs": {
|
||||||
|
"position": VACUUM_VOLUME,
|
||||||
|
"max_velocity": PUMP_FLOW_RATE
|
||||||
|
}
|
||||||
|
}
|
||||||
|
])
|
||||||
|
print(f"EVACUATE_REFILL: 使用备选手动泵动作")
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
print(f"EVACUATE_REFILL: ❌ 抽真空 pump_protocol 失败: {str(e)}")
|
||||||
|
import traceback
|
||||||
|
print(f"EVACUATE_REFILL: 详细错误:\n{traceback.format_exc()}")
|
||||||
|
|
||||||
|
# **修复**: 添加手动动作而不是忽略错误
|
||||||
|
print(f"EVACUATE_REFILL: 使用手动备选方案")
|
||||||
|
action_sequence.extend([
|
||||||
|
{
|
||||||
|
"device_id": "multiway_valve_1",
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "5"} # 反应器端口
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "transfer_pump_1",
|
||||||
|
"action_name": "set_position",
|
||||||
|
"action_kwargs": {
|
||||||
|
"position": VACUUM_VOLUME,
|
||||||
|
"max_velocity": PUMP_FLOW_RATE
|
||||||
|
}
|
||||||
|
}
|
||||||
|
])
|
||||||
|
|
||||||
|
# 关闭真空电磁阀
|
||||||
|
if vacuum_solenoid:
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": vacuum_solenoid,
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "CLOSED"}
|
||||||
|
})
|
||||||
|
|
||||||
|
# 关闭真空泵
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": vacuum_pump,
|
||||||
|
"action_name": "set_status",
|
||||||
|
"action_kwargs": {"string": "OFF"}
|
||||||
|
})
|
||||||
|
|
||||||
|
# ============ 充气阶段 ============
|
||||||
|
print(f"EVACUATE_REFILL: 充气阶段开始")
|
||||||
|
|
||||||
|
# 启动气源
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": gas_source,
|
||||||
|
"action_name": "set_status",
|
||||||
|
"action_kwargs": {"string": "ON"}
|
||||||
|
})
|
||||||
|
|
||||||
|
# 开启气源电磁阀
|
||||||
|
if gas_solenoid:
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": gas_solenoid,
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "OPEN"}
|
||||||
|
})
|
||||||
|
|
||||||
|
# **关键修复**: 改进充气 pump_protocol 调用
|
||||||
|
print(f"EVACUATE_REFILL: 调用充气 pump_protocol: {gas_source} → {vessel}")
|
||||||
|
|
||||||
|
try:
|
||||||
|
gas_transfer_actions = generate_pump_protocol_with_rinsing(
|
||||||
|
G=G,
|
||||||
|
from_vessel=gas_source,
|
||||||
|
to_vessel=vessel,
|
||||||
|
volume=REFILL_VOLUME,
|
||||||
|
amount="",
|
||||||
|
time=0.0,
|
||||||
|
viscous=False,
|
||||||
|
rinsing_solvent="", # **修复**: 明确不使用清洗
|
||||||
|
rinsing_volume=0.0,
|
||||||
|
rinsing_repeats=0,
|
||||||
|
solid=False,
|
||||||
|
flowrate=PUMP_FLOW_RATE,
|
||||||
|
transfer_flowrate=PUMP_FLOW_RATE
|
||||||
|
)
|
||||||
|
|
||||||
|
if gas_transfer_actions:
|
||||||
|
action_sequence.extend(gas_transfer_actions)
|
||||||
|
print(f"EVACUATE_REFILL: ✅ 成功添加 {len(gas_transfer_actions)} 个充气动作")
|
||||||
|
else:
|
||||||
|
print(f"EVACUATE_REFILL: ⚠️ 充气 pump_protocol 返回空序列")
|
||||||
|
# **修复**: 添加手动充气动作
|
||||||
|
action_sequence.extend([
|
||||||
|
{
|
||||||
|
"device_id": "multiway_valve_2",
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "8"} # 氮气端口
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "transfer_pump_2",
|
||||||
|
"action_name": "set_position",
|
||||||
|
"action_kwargs": {
|
||||||
|
"position": REFILL_VOLUME,
|
||||||
|
"max_velocity": PUMP_FLOW_RATE
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "multiway_valve_2",
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "5"} # 反应器端口
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "transfer_pump_2",
|
||||||
|
"action_name": "set_position",
|
||||||
|
"action_kwargs": {
|
||||||
|
"position": 0.0,
|
||||||
|
"max_velocity": PUMP_FLOW_RATE
|
||||||
|
}
|
||||||
|
}
|
||||||
|
])
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
print(f"EVACUATE_REFILL: ❌ 充气 pump_protocol 失败: {str(e)}")
|
||||||
|
import traceback
|
||||||
|
print(f"EVACUATE_REFILL: 详细错误:\n{traceback.format_exc()}")
|
||||||
|
|
||||||
|
# **修复**: 使用手动充气动作
|
||||||
|
print(f"EVACUATE_REFILL: 使用手动充气方案")
|
||||||
|
action_sequence.extend([
|
||||||
|
{
|
||||||
|
"device_id": "multiway_valve_2",
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "8"} # 连接气源
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "transfer_pump_2",
|
||||||
|
"action_name": "set_position",
|
||||||
|
"action_kwargs": {
|
||||||
|
"position": REFILL_VOLUME,
|
||||||
|
"max_velocity": PUMP_FLOW_RATE
|
||||||
|
}
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "multiway_valve_2",
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "5"} # 连接反应器
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"device_id": "transfer_pump_2",
|
||||||
|
"action_name": "set_position",
|
||||||
|
"action_kwargs": {
|
||||||
|
"position": 0.0,
|
||||||
|
"max_velocity": PUMP_FLOW_RATE
|
||||||
|
}
|
||||||
|
}
|
||||||
|
])
|
||||||
|
|
||||||
|
# 关闭气源电磁阀
|
||||||
|
if gas_solenoid:
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": gas_solenoid,
|
||||||
|
"action_name": "set_valve_position",
|
||||||
|
"action_kwargs": {"command": "CLOSED"}
|
||||||
|
})
|
||||||
|
|
||||||
# 关闭气源
|
# 关闭气源
|
||||||
vacuum_action_sequence.append(
|
action_sequence.append({
|
||||||
{
|
"device_id": gas_source,
|
||||||
"device_id": vacuum_backbone["gas"],
|
"action_name": "set_status",
|
||||||
"action_name": "set_status",
|
"action_kwargs": {"string": "OFF"}
|
||||||
"action_kwargs": {
|
})
|
||||||
"string": "OFF"
|
|
||||||
}
|
|
||||||
}
|
|
||||||
)
|
|
||||||
|
|
||||||
# 关闭阀门
|
# 等待下一次循环
|
||||||
vacuum_action_sequence.append(
|
if cycle < repeats - 1:
|
||||||
{
|
action_sequence.append({
|
||||||
"device_id": vacuum_backbone["gas_valve"],
|
"action_name": "wait",
|
||||||
"action_name": "set_valve_position",
|
"action_kwargs": {"time": 2.0}
|
||||||
"action_kwargs": {
|
})
|
||||||
"command": "CLOSED"
|
|
||||||
}
|
# 停止搅拌器
|
||||||
}
|
if stirrer_id:
|
||||||
)
|
action_sequence.append({
|
||||||
return vacuum_action_sequence
|
"device_id": stirrer_id,
|
||||||
|
"action_name": "stop_stir",
|
||||||
|
"action_kwargs": {"vessel": vessel}
|
||||||
|
})
|
||||||
|
|
||||||
|
print(f"EVACUATE_REFILL: 协议生成完成，共 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 测试函数
|
||||||
|
def test_evacuateandrefill_protocol():
|
||||||
|
"""测试抽真空充气协议"""
|
||||||
|
print("=== EVACUATE AND REFILL PROTOCOL 测试 ===")
|
||||||
|
print("测试完成")
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
test_evacuateandrefill_protocol()
|
||||||
143
unilabos/compile/evacuateandrefill_protocol_old.py
Normal file
143
unilabos/compile/evacuateandrefill_protocol_old.py
Normal file
@@ -0,0 +1,143 @@
|
|||||||
|
# import numpy as np
|
||||||
|
# import networkx as nx
|
||||||
|
|
||||||
|
|
||||||
|
# def generate_evacuateandrefill_protocol(
|
||||||
|
# G: nx.DiGraph,
|
||||||
|
# vessel: str,
|
||||||
|
# gas: str,
|
||||||
|
# repeats: int = 1
|
||||||
|
# ) -> list[dict]:
|
||||||
|
# """
|
||||||
|
# 生成泵操作的动作序列。
|
||||||
|
|
||||||
|
# :param G: 有向图, 节点为容器和注射泵, 边为流体管道, A→B边的属性为管道接A端的阀门位置
|
||||||
|
# :param from_vessel: 容器A
|
||||||
|
# :param to_vessel: 容器B
|
||||||
|
# :param volume: 转移的体积
|
||||||
|
# :param flowrate: 最终注入容器B时的流速
|
||||||
|
# :param transfer_flowrate: 泵骨架中转移流速（若不指定，默认与注入流速相同）
|
||||||
|
# :return: 泵操作的动作序列
|
||||||
|
# """
|
||||||
|
|
||||||
|
# # 生成电磁阀、真空泵、气源操作的动作序列
|
||||||
|
# vacuum_action_sequence = []
|
||||||
|
# nodes = G.nodes(data=True)
|
||||||
|
|
||||||
|
# # 找到和 vessel 相连的电磁阀和真空泵、气源
|
||||||
|
# vacuum_backbone = {"vessel": vessel}
|
||||||
|
|
||||||
|
# for neighbor in G.neighbors(vessel):
|
||||||
|
# if nodes[neighbor]["class"].startswith("solenoid_valve"):
|
||||||
|
# for neighbor2 in G.neighbors(neighbor):
|
||||||
|
# if neighbor2 == vessel:
|
||||||
|
# continue
|
||||||
|
# if nodes[neighbor2]["class"].startswith("vacuum_pump"):
|
||||||
|
# vacuum_backbone.update({"vacuum_valve": neighbor, "pump": neighbor2})
|
||||||
|
# break
|
||||||
|
# elif nodes[neighbor2]["class"].startswith("gas_source"):
|
||||||
|
# vacuum_backbone.update({"gas_valve": neighbor, "gas": neighbor2})
|
||||||
|
# break
|
||||||
|
# # 判断是否设备齐全
|
||||||
|
# if len(vacuum_backbone) < 5:
|
||||||
|
# print(f"\n\n\n{vacuum_backbone}\n\n\n")
|
||||||
|
# raise ValueError("Not all devices are connected to the vessel.")
|
||||||
|
|
||||||
|
# # 生成操作的动作序列
|
||||||
|
# for i in range(repeats):
|
||||||
|
# # 打开真空泵阀门、关闭气源阀门
|
||||||
|
# vacuum_action_sequence.append([
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["vacuum_valve"],
|
||||||
|
# "action_name": "set_valve_position",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "command": "OPEN"
|
||||||
|
# }
|
||||||
|
# },
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["gas_valve"],
|
||||||
|
# "action_name": "set_valve_position",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "command": "CLOSED"
|
||||||
|
# }
|
||||||
|
# }
|
||||||
|
# ])
|
||||||
|
|
||||||
|
# # 打开真空泵、关闭气源
|
||||||
|
# vacuum_action_sequence.append([
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["pump"],
|
||||||
|
# "action_name": "set_status",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "string": "ON"
|
||||||
|
# }
|
||||||
|
# },
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["gas"],
|
||||||
|
# "action_name": "set_status",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "string": "OFF"
|
||||||
|
# }
|
||||||
|
# }
|
||||||
|
# ])
|
||||||
|
# vacuum_action_sequence.append({"action_name": "wait", "action_kwargs": {"time": 60}})
|
||||||
|
|
||||||
|
# # 关闭真空泵阀门、打开气源阀门
|
||||||
|
# vacuum_action_sequence.append([
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["vacuum_valve"],
|
||||||
|
# "action_name": "set_valve_position",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "command": "CLOSED"
|
||||||
|
# }
|
||||||
|
# },
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["gas_valve"],
|
||||||
|
# "action_name": "set_valve_position",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "command": "OPEN"
|
||||||
|
# }
|
||||||
|
# }
|
||||||
|
# ])
|
||||||
|
|
||||||
|
# # 关闭真空泵、打开气源
|
||||||
|
# vacuum_action_sequence.append([
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["pump"],
|
||||||
|
# "action_name": "set_status",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "string": "OFF"
|
||||||
|
# }
|
||||||
|
# },
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["gas"],
|
||||||
|
# "action_name": "set_status",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "string": "ON"
|
||||||
|
# }
|
||||||
|
# }
|
||||||
|
# ])
|
||||||
|
# vacuum_action_sequence.append({"action_name": "wait", "action_kwargs": {"time": 60}})
|
||||||
|
|
||||||
|
# # 关闭气源
|
||||||
|
# vacuum_action_sequence.append(
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["gas"],
|
||||||
|
# "action_name": "set_status",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "string": "OFF"
|
||||||
|
# }
|
||||||
|
# }
|
||||||
|
# )
|
||||||
|
|
||||||
|
# # 关闭阀门
|
||||||
|
# vacuum_action_sequence.append(
|
||||||
|
# {
|
||||||
|
# "device_id": vacuum_backbone["gas_valve"],
|
||||||
|
# "action_name": "set_valve_position",
|
||||||
|
# "action_kwargs": {
|
||||||
|
# "command": "CLOSED"
|
||||||
|
# }
|
||||||
|
# }
|
||||||
|
# )
|
||||||
|
# return vacuum_action_sequence
|
||||||
@@ -1,81 +1,326 @@
|
|||||||
import numpy as np
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from .pump_protocol import generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def get_vessel_liquid_volume(G: nx.DiGraph, vessel: str) -> float:
|
||||||
|
"""
|
||||||
|
获取容器中的液体体积
|
||||||
|
"""
|
||||||
|
if vessel not in G.nodes():
|
||||||
|
return 0.0
|
||||||
|
|
||||||
|
vessel_data = G.nodes[vessel].get('data', {})
|
||||||
|
liquids = vessel_data.get('liquid', [])
|
||||||
|
|
||||||
|
total_volume = 0.0
|
||||||
|
for liquid in liquids:
|
||||||
|
if isinstance(liquid, dict) and 'liquid_volume' in liquid:
|
||||||
|
total_volume += liquid['liquid_volume']
|
||||||
|
|
||||||
|
return total_volume
|
||||||
|
|
||||||
|
|
||||||
|
def find_rotavap_device(G: nx.DiGraph) -> str:
|
||||||
|
"""查找旋转蒸发仪设备"""
|
||||||
|
rotavap_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_rotavap']
|
||||||
|
|
||||||
|
if rotavap_nodes:
|
||||||
|
return rotavap_nodes[0]
|
||||||
|
|
||||||
|
raise ValueError("系统中未找到旋转蒸发仪设备")
|
||||||
|
|
||||||
|
|
||||||
|
def find_solvent_recovery_vessel(G: nx.DiGraph) -> str:
|
||||||
|
"""查找溶剂回收容器"""
|
||||||
|
possible_names = [
|
||||||
|
"flask_distillate",
|
||||||
|
"bottle_distillate",
|
||||||
|
"vessel_distillate",
|
||||||
|
"distillate",
|
||||||
|
"solvent_recovery",
|
||||||
|
"flask_solvent_recovery",
|
||||||
|
"collection_flask"
|
||||||
|
]
|
||||||
|
|
||||||
|
for vessel_name in possible_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
# 如果找不到专门的回收容器，使用废液容器
|
||||||
|
waste_names = ["waste_workup", "flask_waste", "bottle_waste", "waste"]
|
||||||
|
for vessel_name in waste_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到溶剂回收容器。尝试了以下名称: {possible_names + waste_names}")
|
||||||
|
|
||||||
|
|
||||||
def generate_evaporate_protocol(
|
def generate_evaporate_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
vessel: str,
|
vessel: str,
|
||||||
pressure: float,
|
pressure: float = 0.1,
|
||||||
temp: float,
|
temp: float = 60.0,
|
||||||
time: float,
|
time: float = 1800.0,
|
||||||
stir_speed: float
|
stir_speed: float = 100.0
|
||||||
) -> list[dict]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
Generate a protocol to evaporate a solution from a vessel.
|
生成蒸发操作的协议序列
|
||||||
|
|
||||||
:param G: Directed graph. Nodes are containers and pumps, edges are fluidic connections.
|
蒸发流程：
|
||||||
:param vessel: Vessel to clean.
|
1. 液体转移：将待蒸发溶液从源容器转移到旋转蒸发仪
|
||||||
:param solvent: Solvent to clean vessel with.
|
2. 蒸发操作：执行旋转蒸发
|
||||||
:param volume: Volume of solvent to clean vessel with.
|
3. (可选) 溶剂回收：将冷凝的溶剂转移到回收容器
|
||||||
:param temp: Temperature to heat vessel to while cleaning.
|
4. 残留物转移：将浓缩物从旋转蒸发仪转移回原容器或新容器
|
||||||
:param repeats: Number of cleaning cycles to perform.
|
|
||||||
:return: List of actions to clean vessel.
|
Args:
|
||||||
|
G: 有向图，节点为设备和容器，边为流体管道
|
||||||
|
vessel: 包含待蒸发溶液的容器名称
|
||||||
|
pressure: 蒸发时的真空度 (bar)，默认0.1 bar
|
||||||
|
temp: 蒸发时的加热温度 (°C)，默认60°C
|
||||||
|
time: 蒸发时间 (秒)，默认1800秒(30分钟)
|
||||||
|
stir_speed: 旋转速度 (RPM)，默认100 RPM
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
List[Dict[str, Any]]: 蒸发操作的动作序列
|
||||||
|
|
||||||
|
Raises:
|
||||||
|
ValueError: 当找不到必要的设备时抛出异常
|
||||||
|
|
||||||
|
Examples:
|
||||||
|
evaporate_actions = generate_evaporate_protocol(G, "reaction_mixture", 0.05, 80.0, 3600.0)
|
||||||
"""
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
# 生成泵操作的动作序列
|
print(f"EVAPORATE: 开始生成蒸发协议")
|
||||||
pump_action_sequence = []
|
print(f" - 源容器: {vessel}")
|
||||||
reactor_volume = 500.0
|
print(f" - 真空度: {pressure} bar")
|
||||||
transfer_flowrate = flowrate = 2.5
|
print(f" - 温度: {temp}°C")
|
||||||
|
print(f" - 时间: {time}s ({time/60:.1f}分钟)")
|
||||||
|
print(f" - 旋转速度: {stir_speed} RPM")
|
||||||
|
|
||||||
# 开启冷凝器
|
# 验证源容器存在
|
||||||
pump_action_sequence.append({
|
if vessel not in G.nodes():
|
||||||
"device_id": "rotavap_chiller",
|
raise ValueError(f"源容器 '{vessel}' 不存在于系统中")
|
||||||
"action_name": "set_temperature",
|
|
||||||
"action_kwargs": {
|
# 获取源容器中的液体体积
|
||||||
"command": "-40"
|
source_volume = get_vessel_liquid_volume(G, vessel)
|
||||||
}
|
print(f"EVAPORATE: 源容器 {vessel} 中有 {source_volume} mL 液体")
|
||||||
})
|
|
||||||
# TODO: 通过温度反馈改为 HeatChillToTemp，而非等待固定时间
|
# 查找旋转蒸发仪
|
||||||
pump_action_sequence.append({
|
try:
|
||||||
|
rotavap_id = find_rotavap_device(G)
|
||||||
|
print(f"EVAPORATE: 找到旋转蒸发仪: {rotavap_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到旋转蒸发仪: {str(e)}")
|
||||||
|
|
||||||
|
# 查找旋转蒸发仪样品容器
|
||||||
|
rotavap_vessel = None
|
||||||
|
possible_rotavap_vessels = ["rotavap_flask", "rotavap", "flask_rotavap", "evaporation_flask"]
|
||||||
|
for rv in possible_rotavap_vessels:
|
||||||
|
if rv in G.nodes():
|
||||||
|
rotavap_vessel = rv
|
||||||
|
break
|
||||||
|
|
||||||
|
if not rotavap_vessel:
|
||||||
|
raise ValueError(f"未找到旋转蒸发仪样品容器。尝试了: {possible_rotavap_vessels}")
|
||||||
|
|
||||||
|
print(f"EVAPORATE: 找到旋转蒸发仪样品容器: {rotavap_vessel}")
|
||||||
|
|
||||||
|
# 查找溶剂回收容器
|
||||||
|
try:
|
||||||
|
distillate_vessel = find_solvent_recovery_vessel(G)
|
||||||
|
print(f"EVAPORATE: 找到溶剂回收容器: {distillate_vessel}")
|
||||||
|
except ValueError as e:
|
||||||
|
print(f"EVAPORATE: 警告 - {str(e)}")
|
||||||
|
distillate_vessel = None
|
||||||
|
|
||||||
|
# === 简化的体积计算策略 ===
|
||||||
|
if source_volume > 0:
|
||||||
|
# 如果能检测到液体体积，使用实际体积的大部分
|
||||||
|
transfer_volume = min(source_volume * 0.9, 250.0) # 90%或最多250mL
|
||||||
|
print(f"EVAPORATE: 检测到液体体积，将转移 {transfer_volume} mL")
|
||||||
|
else:
|
||||||
|
# 如果检测不到液体体积，默认转移一整瓶 250mL
|
||||||
|
transfer_volume = 250.0
|
||||||
|
print(f"EVAPORATE: 未检测到液体体积，默认转移整瓶 {transfer_volume} mL")
|
||||||
|
|
||||||
|
# === 第一步：将待蒸发溶液转移到旋转蒸发仪 ===
|
||||||
|
print(f"EVAPORATE: 将 {transfer_volume} mL 溶液从 {vessel} 转移到 {rotavap_vessel}")
|
||||||
|
try:
|
||||||
|
transfer_to_rotavap_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=vessel,
|
||||||
|
to_vessel=rotavap_vessel,
|
||||||
|
volume=transfer_volume,
|
||||||
|
flowrate=2.0,
|
||||||
|
transfer_flowrate=2.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(transfer_to_rotavap_actions)
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"无法将溶液转移到旋转蒸发仪: {str(e)}")
|
||||||
|
|
||||||
|
# 转移后等待
|
||||||
|
wait_action = {
|
||||||
"action_name": "wait",
|
"action_name": "wait",
|
||||||
"action_kwargs": {
|
"action_kwargs": {"time": 10}
|
||||||
"time": 1800
|
}
|
||||||
}
|
action_sequence.append(wait_action)
|
||||||
})
|
|
||||||
|
|
||||||
# 开启旋蒸真空泵、旋转，在液体转移后运行time时间
|
# === 第二步：执行旋转蒸发 ===
|
||||||
pump_action_sequence.append({
|
print(f"EVAPORATE: 执行旋转蒸发操作")
|
||||||
"device_id": "rotavap_controller",
|
evaporate_action = {
|
||||||
"action_name": "set_pump_time",
|
"device_id": rotavap_id,
|
||||||
|
"action_name": "evaporate",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"command": str(time + reactor_volume / flowrate * 3)
|
"vessel": rotavap_vessel,
|
||||||
|
"pressure": pressure,
|
||||||
|
"temp": temp,
|
||||||
|
"time": time,
|
||||||
|
"stir_speed": stir_speed
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
pump_action_sequence.append({
|
action_sequence.append(evaporate_action)
|
||||||
"device_id": "rotavap_controller",
|
|
||||||
"action_name": "set_pump_time",
|
|
||||||
"action_kwargs": {
|
|
||||||
"command": str(time + reactor_volume / flowrate * 3)
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
# 液体转入旋转蒸发器
|
# 蒸发后等待系统稳定
|
||||||
pump_action_sequence.append({
|
wait_action = {
|
||||||
"device_id": "",
|
|
||||||
"action_name": "PumpTransferProtocol",
|
|
||||||
"action_kwargs": {
|
|
||||||
"from_vessel": vessel,
|
|
||||||
"to_vessel": "rotavap",
|
|
||||||
"volume": reactor_volume,
|
|
||||||
"time": reactor_volume / flowrate,
|
|
||||||
# "transfer_flowrate": transfer_flowrate,
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
pump_action_sequence.append({
|
|
||||||
"action_name": "wait",
|
"action_name": "wait",
|
||||||
"action_kwargs": {
|
"action_kwargs": {"time": 30}
|
||||||
"time": time
|
}
|
||||||
}
|
action_sequence.append(wait_action)
|
||||||
})
|
|
||||||
return pump_action_sequence
|
# === 第三步：溶剂回收（如果有回收容器）===
|
||||||
|
if distillate_vessel:
|
||||||
|
print(f"EVAPORATE: 回收冷凝溶剂到 {distillate_vessel}")
|
||||||
|
try:
|
||||||
|
condenser_vessel = "rotavap_condenser"
|
||||||
|
if condenser_vessel in G.nodes():
|
||||||
|
# 估算回收体积（约为转移体积的70% - 大部分溶剂被蒸发回收）
|
||||||
|
recovery_volume = transfer_volume * 0.7
|
||||||
|
print(f"EVAPORATE: 预计回收 {recovery_volume} mL 溶剂")
|
||||||
|
|
||||||
|
recovery_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=condenser_vessel,
|
||||||
|
to_vessel=distillate_vessel,
|
||||||
|
volume=recovery_volume,
|
||||||
|
flowrate=3.0,
|
||||||
|
transfer_flowrate=3.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(recovery_actions)
|
||||||
|
else:
|
||||||
|
print("EVAPORATE: 未找到冷凝器容器，跳过溶剂回收")
|
||||||
|
except Exception as e:
|
||||||
|
print(f"EVAPORATE: 溶剂回收失败: {str(e)}")
|
||||||
|
|
||||||
|
# === 第四步：将浓缩物转移回原容器 ===
|
||||||
|
print(f"EVAPORATE: 将浓缩物从旋转蒸发仪转移回 {vessel}")
|
||||||
|
try:
|
||||||
|
# 估算浓缩物体积（约为转移体积的20% - 大部分溶剂已蒸发）
|
||||||
|
concentrate_volume = transfer_volume * 0.2
|
||||||
|
print(f"EVAPORATE: 预计浓缩物体积 {concentrate_volume} mL")
|
||||||
|
|
||||||
|
transfer_back_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=rotavap_vessel,
|
||||||
|
to_vessel=vessel,
|
||||||
|
volume=concentrate_volume,
|
||||||
|
flowrate=1.0, # 浓缩物可能粘稠，用较慢流速
|
||||||
|
transfer_flowrate=1.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(transfer_back_actions)
|
||||||
|
except Exception as e:
|
||||||
|
print(f"EVAPORATE: 将浓缩物转移回容器失败: {str(e)}")
|
||||||
|
|
||||||
|
# === 第五步：清洗旋转蒸发仪 ===
|
||||||
|
print(f"EVAPORATE: 清洗旋转蒸发仪")
|
||||||
|
try:
|
||||||
|
# 查找清洗溶剂
|
||||||
|
cleaning_solvent = None
|
||||||
|
for solvent in ["flask_ethanol", "flask_acetone", "flask_water"]:
|
||||||
|
if solvent in G.nodes():
|
||||||
|
cleaning_solvent = solvent
|
||||||
|
break
|
||||||
|
|
||||||
|
if cleaning_solvent and distillate_vessel:
|
||||||
|
# 用固定量溶剂清洗（不依赖检测体积）
|
||||||
|
cleaning_volume = 50.0 # 固定50mL清洗
|
||||||
|
print(f"EVAPORATE: 用 {cleaning_volume} mL {cleaning_solvent} 清洗")
|
||||||
|
|
||||||
|
# 清洗溶剂加入
|
||||||
|
cleaning_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=cleaning_solvent,
|
||||||
|
to_vessel=rotavap_vessel,
|
||||||
|
volume=cleaning_volume,
|
||||||
|
flowrate=2.0,
|
||||||
|
transfer_flowrate=2.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(cleaning_actions)
|
||||||
|
|
||||||
|
# 将清洗液转移到废液/回收容器
|
||||||
|
waste_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=rotavap_vessel,
|
||||||
|
to_vessel=distillate_vessel, # 使用回收容器作为废液
|
||||||
|
volume=cleaning_volume,
|
||||||
|
flowrate=2.0,
|
||||||
|
transfer_flowrate=2.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(waste_actions)
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
print(f"EVAPORATE: 清洗步骤失败: {str(e)}")
|
||||||
|
|
||||||
|
print(f"EVAPORATE: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
print(f"EVAPORATE: 蒸发协议生成完成")
|
||||||
|
print(f"EVAPORATE: 总处理体积: {transfer_volume} mL")
|
||||||
|
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 便捷函数：常用蒸发方案 - 都使用250mL标准瓶体积
|
||||||
|
def generate_quick_evaporate_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
temp: float = 40.0,
|
||||||
|
time: float = 900.0 # 15分钟
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""快速蒸发：低温、短时间、整瓶处理"""
|
||||||
|
return generate_evaporate_protocol(G, vessel, 0.2, temp, time, 80.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_gentle_evaporate_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
temp: float = 50.0,
|
||||||
|
time: float = 2700.0 # 45分钟
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""温和蒸发：中等条件、较长时间、整瓶处理"""
|
||||||
|
return generate_evaporate_protocol(G, vessel, 0.1, temp, time, 60.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_high_vacuum_evaporate_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
temp: float = 35.0,
|
||||||
|
time: float = 3600.0 # 1小时
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""高真空蒸发：低温、高真空、长时间、整瓶处理"""
|
||||||
|
return generate_evaporate_protocol(G, vessel, 0.01, temp, time, 120.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_standard_evaporate_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""标准蒸发：常用参数、整瓶250mL处理"""
|
||||||
|
return generate_evaporate_protocol(
|
||||||
|
G=G,
|
||||||
|
vessel=vessel,
|
||||||
|
pressure=0.1, # 标准真空度
|
||||||
|
temp=60.0, # 适中温度
|
||||||
|
time=1800.0, # 30分钟
|
||||||
|
stir_speed=100.0 # 适中旋转速度
|
||||||
|
)
|
||||||
|
|||||||
@@ -1,5 +1,89 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from .pump_protocol import generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def get_vessel_liquid_volume(G: nx.DiGraph, vessel: str) -> float:
|
||||||
|
"""获取容器中的液体体积"""
|
||||||
|
if vessel not in G.nodes():
|
||||||
|
return 0.0
|
||||||
|
|
||||||
|
vessel_data = G.nodes[vessel].get('data', {})
|
||||||
|
liquids = vessel_data.get('liquid', [])
|
||||||
|
|
||||||
|
total_volume = 0.0
|
||||||
|
for liquid in liquids:
|
||||||
|
if isinstance(liquid, dict) and 'liquid_volume' in liquid:
|
||||||
|
total_volume += liquid['liquid_volume']
|
||||||
|
|
||||||
|
return total_volume
|
||||||
|
|
||||||
|
|
||||||
|
def find_filter_device(G: nx.DiGraph) -> str:
|
||||||
|
"""查找过滤器设备"""
|
||||||
|
filter_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_filter']
|
||||||
|
|
||||||
|
if filter_nodes:
|
||||||
|
return filter_nodes[0]
|
||||||
|
|
||||||
|
raise ValueError("系统中未找到过滤器设备")
|
||||||
|
|
||||||
|
|
||||||
|
def find_filter_vessel(G: nx.DiGraph) -> str:
|
||||||
|
"""查找过滤器专用容器"""
|
||||||
|
possible_names = [
|
||||||
|
"filter_vessel", # 标准过滤器容器
|
||||||
|
"filtration_vessel", # 备选名称
|
||||||
|
"vessel_filter", # 备选名称
|
||||||
|
"filter_unit", # 备选名称
|
||||||
|
"filter" # 简单名称
|
||||||
|
]
|
||||||
|
|
||||||
|
for vessel_name in possible_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到过滤器容器。尝试了以下名称: {possible_names}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_filtrate_vessel(G: nx.DiGraph, filtrate_vessel: str = "") -> str:
|
||||||
|
"""查找滤液收集容器"""
|
||||||
|
if filtrate_vessel and filtrate_vessel in G.nodes():
|
||||||
|
return filtrate_vessel
|
||||||
|
|
||||||
|
# 自动查找滤液容器
|
||||||
|
possible_names = [
|
||||||
|
"filtrate_vessel",
|
||||||
|
"collection_bottle_1",
|
||||||
|
"collection_bottle_2",
|
||||||
|
"waste_workup"
|
||||||
|
]
|
||||||
|
|
||||||
|
for vessel_name in possible_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到滤液收集容器。尝试了以下名称: {possible_names}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_connected_heatchill(G: nx.DiGraph, vessel: str) -> str:
|
||||||
|
"""查找与指定容器相连的加热搅拌器"""
|
||||||
|
# 查找所有加热搅拌器节点
|
||||||
|
heatchill_nodes = [node for node in G.nodes()
|
||||||
|
if G.nodes[node].get('class') == 'virtual_heatchill']
|
||||||
|
|
||||||
|
# 检查哪个加热器与目标容器相连
|
||||||
|
for heatchill in heatchill_nodes:
|
||||||
|
if G.has_edge(heatchill, vessel) or G.has_edge(vessel, heatchill):
|
||||||
|
return heatchill
|
||||||
|
|
||||||
|
# 如果没有直接连接，返回第一个可用的加热器
|
||||||
|
if heatchill_nodes:
|
||||||
|
return heatchill_nodes[0]
|
||||||
|
|
||||||
|
raise ValueError(f"未找到与容器 {vessel} 相连的加热搅拌器")
|
||||||
|
|
||||||
|
|
||||||
def generate_filter_protocol(
|
def generate_filter_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
@@ -12,59 +96,209 @@ def generate_filter_protocol(
|
|||||||
volume: float = 0.0
|
volume: float = 0.0
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成过滤操作的协议序列
|
生成过滤操作的协议序列，复用 pump_protocol 的成熟算法
|
||||||
|
|
||||||
|
过滤流程：
|
||||||
|
1. 液体转移：将待过滤溶液从源容器转移到过滤器
|
||||||
|
2. 启动加热搅拌：设置温度和搅拌
|
||||||
|
3. 执行过滤：通过过滤器分离固液
|
||||||
|
4. (可选) 继续或停止加热搅拌
|
||||||
|
|
||||||
Args:
|
Args:
|
||||||
G: 有向图，节点为设备和容器
|
G: 有向图，节点为设备和容器，边为流体管道
|
||||||
vessel: 过滤容器
|
vessel: 包含待过滤溶液的容器名称
|
||||||
filtrate_vessel: 滤液容器（可选）
|
filtrate_vessel: 滤液收集容器（可选，自动查找）
|
||||||
stir: 是否搅拌
|
stir: 是否在过滤过程中搅拌
|
||||||
stir_speed: 搅拌速度（可选）
|
stir_speed: 搅拌速度 (RPM)
|
||||||
temp: 温度（可选，摄氏度）
|
temp: 过滤温度 (°C)
|
||||||
continue_heatchill: 是否继续加热冷却
|
continue_heatchill: 过滤后是否继续加热搅拌
|
||||||
volume: 过滤体积（可选）
|
volume: 预期过滤体积 (mL)，0表示全部过滤
|
||||||
|
|
||||||
Returns:
|
Returns:
|
||||||
List[Dict[str, Any]]: 过滤操作的动作序列
|
List[Dict[str, Any]]: 过滤操作的动作序列
|
||||||
|
|
||||||
Raises:
|
|
||||||
ValueError: 当找不到过滤设备时抛出异常
|
|
||||||
|
|
||||||
Examples:
|
|
||||||
filter_protocol = generate_filter_protocol(G, "reactor", "filtrate_vessel", stir=True, volume=100.0)
|
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 查找过滤设备
|
print(f"FILTER: 开始生成过滤协议")
|
||||||
filter_nodes = [node for node in G.nodes()
|
print(f" - 源容器: {vessel}")
|
||||||
if G.nodes[node].get('class') == 'virtual_filter']
|
print(f" - 滤液容器: {filtrate_vessel}")
|
||||||
|
print(f" - 搅拌: {stir} ({stir_speed} RPM)" if stir else " - 搅拌: 否")
|
||||||
|
print(f" - 过滤温度: {temp}°C")
|
||||||
|
print(f" - 预期过滤体积: {volume} mL" if volume > 0 else " - 预期过滤体积: 全部")
|
||||||
|
print(f" - 继续加热搅拌: {continue_heatchill}")
|
||||||
|
|
||||||
if not filter_nodes:
|
# 验证源容器存在
|
||||||
raise ValueError("没有找到可用的过滤设备")
|
|
||||||
|
|
||||||
# 使用第一个可用的过滤器
|
|
||||||
filter_id = filter_nodes[0]
|
|
||||||
|
|
||||||
# 验证容器是否存在
|
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"过滤容器 {vessel} 不存在于图中")
|
raise ValueError(f"源容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
if filtrate_vessel and filtrate_vessel not in G.nodes():
|
# 获取源容器中的液体体积
|
||||||
raise ValueError(f"滤液容器 {filtrate_vessel} 不存在于图中")
|
source_volume = get_vessel_liquid_volume(G, vessel)
|
||||||
|
print(f"FILTER: 源容器 {vessel} 中有 {source_volume} mL 液体")
|
||||||
|
|
||||||
# 执行过滤操作
|
# 查找过滤器设备
|
||||||
|
try:
|
||||||
|
filter_id = find_filter_device(G)
|
||||||
|
print(f"FILTER: 找到过滤器: {filter_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到过滤器: {str(e)}")
|
||||||
|
|
||||||
|
# 查找过滤器容器
|
||||||
|
try:
|
||||||
|
filter_vessel_id = find_filter_vessel(G)
|
||||||
|
print(f"FILTER: 找到过滤器容器: {filter_vessel_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到过滤器容器: {str(e)}")
|
||||||
|
|
||||||
|
# 查找滤液收集容器
|
||||||
|
try:
|
||||||
|
actual_filtrate_vessel = find_filtrate_vessel(G, filtrate_vessel)
|
||||||
|
print(f"FILTER: 找到滤液收集容器: {actual_filtrate_vessel}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到滤液收集容器: {str(e)}")
|
||||||
|
|
||||||
|
# 查找加热搅拌器（如果需要温度控制或搅拌）
|
||||||
|
heatchill_id = None
|
||||||
|
if temp != 25.0 or stir or continue_heatchill:
|
||||||
|
try:
|
||||||
|
heatchill_id = find_connected_heatchill(G, filter_vessel_id)
|
||||||
|
print(f"FILTER: 找到加热搅拌器: {heatchill_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
print(f"FILTER: 警告 - {str(e)}")
|
||||||
|
|
||||||
|
# === 简化的体积计算策略 ===
|
||||||
|
if volume > 0:
|
||||||
|
transfer_volume = min(volume, source_volume if source_volume > 0 else volume)
|
||||||
|
print(f"FILTER: 指定过滤体积 {transfer_volume} mL")
|
||||||
|
elif source_volume > 0:
|
||||||
|
transfer_volume = source_volume * 0.9 # 90%
|
||||||
|
print(f"FILTER: 检测到液体体积，将过滤 {transfer_volume} mL")
|
||||||
|
else:
|
||||||
|
transfer_volume = 50.0 # 默认过滤量
|
||||||
|
print(f"FILTER: 未检测到液体体积，默认过滤 {transfer_volume} mL")
|
||||||
|
|
||||||
|
# === 第一步：启动加热搅拌器（在转移前预热） ===
|
||||||
|
if heatchill_id and (temp != 25.0 or stir):
|
||||||
|
print(f"FILTER: 启动加热搅拌器，温度: {temp}°C，搅拌: {stir}")
|
||||||
|
|
||||||
|
heatchill_action = {
|
||||||
|
"device_id": heatchill_id,
|
||||||
|
"action_name": "heat_chill_start",
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": filter_vessel_id,
|
||||||
|
"temp": temp,
|
||||||
|
"purpose": f"过滤过程温度控制和搅拌"
|
||||||
|
}
|
||||||
|
}
|
||||||
|
action_sequence.append(heatchill_action)
|
||||||
|
|
||||||
|
# 等待温度稳定
|
||||||
|
if temp != 25.0:
|
||||||
|
wait_time = min(30, abs(temp - 25.0) * 1.0) # 根据温差估算预热时间
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": wait_time}
|
||||||
|
})
|
||||||
|
|
||||||
|
# === 第二步：将待过滤溶液转移到过滤器 ===
|
||||||
|
print(f"FILTER: 将 {transfer_volume} mL 溶液从 {vessel} 转移到 {filter_vessel_id}")
|
||||||
|
try:
|
||||||
|
# 使用成熟的 pump_protocol 算法进行液体转移
|
||||||
|
transfer_to_filter_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=vessel,
|
||||||
|
to_vessel=filter_vessel_id,
|
||||||
|
volume=transfer_volume,
|
||||||
|
flowrate=1.0, # 过滤转移用较慢速度，避免扰动
|
||||||
|
transfer_flowrate=1.5
|
||||||
|
)
|
||||||
|
action_sequence.extend(transfer_to_filter_actions)
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"无法将溶液转移到过滤器: {str(e)}")
|
||||||
|
|
||||||
|
# 转移后等待
|
||||||
action_sequence.append({
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 5}
|
||||||
|
})
|
||||||
|
|
||||||
|
# === 第三步：执行过滤操作（完全按照 Filter.action 参数） ===
|
||||||
|
print(f"FILTER: 执行过滤操作")
|
||||||
|
filter_action = {
|
||||||
"device_id": filter_id,
|
"device_id": filter_id,
|
||||||
"action_name": "filter_sample",
|
"action_name": "filter",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"vessel": vessel,
|
"vessel": filter_vessel_id,
|
||||||
"filtrate_vessel": filtrate_vessel,
|
"filtrate_vessel": actual_filtrate_vessel,
|
||||||
"stir": stir,
|
"stir": stir,
|
||||||
"stir_speed": stir_speed,
|
"stir_speed": stir_speed,
|
||||||
"temp": temp,
|
"temp": temp,
|
||||||
"continue_heatchill": continue_heatchill,
|
"continue_heatchill": continue_heatchill,
|
||||||
"volume": volume
|
"volume": transfer_volume
|
||||||
}
|
}
|
||||||
|
}
|
||||||
|
action_sequence.append(filter_action)
|
||||||
|
|
||||||
|
# 过滤后等待
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 10}
|
||||||
})
|
})
|
||||||
|
|
||||||
return action_sequence
|
# === 第四步：如果不继续加热搅拌，停止加热器 ===
|
||||||
|
if heatchill_id and not continue_heatchill and (temp != 25.0 or stir):
|
||||||
|
print(f"FILTER: 停止加热搅拌器")
|
||||||
|
|
||||||
|
stop_action = {
|
||||||
|
"device_id": heatchill_id,
|
||||||
|
"action_name": "heat_chill_stop",
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": filter_vessel_id
|
||||||
|
}
|
||||||
|
}
|
||||||
|
action_sequence.append(stop_action)
|
||||||
|
|
||||||
|
print(f"FILTER: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
print(f"FILTER: 过滤协议生成完成")
|
||||||
|
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 便捷函数：常用过滤方案
|
||||||
|
def generate_gravity_filter_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
filtrate_vessel: str = ""
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""重力过滤：室温，无搅拌"""
|
||||||
|
return generate_filter_protocol(G, vessel, filtrate_vessel, False, 0.0, 25.0, False, 0.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_hot_filter_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
filtrate_vessel: str = "",
|
||||||
|
temp: float = 60.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""热过滤：高温过滤，防止结晶析出"""
|
||||||
|
return generate_filter_protocol(G, vessel, filtrate_vessel, False, 0.0, temp, False, 0.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_stirred_filter_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
filtrate_vessel: str = "",
|
||||||
|
stir_speed: float = 200.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""搅拌过滤：低速搅拌，防止滤饼堵塞"""
|
||||||
|
return generate_filter_protocol(G, vessel, filtrate_vessel, True, stir_speed, 25.0, False, 0.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_hot_stirred_filter_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
filtrate_vessel: str = "",
|
||||||
|
temp: float = 60.0,
|
||||||
|
stir_speed: float = 300.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""热搅拌过滤：高温搅拌过滤"""
|
||||||
|
return generate_filter_protocol(G, vessel, filtrate_vessel, True, stir_speed, temp, False, 0.0)
|
||||||
@@ -1,5 +1,72 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from .pump_protocol import generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def get_vessel_liquid_volume(G: nx.DiGraph, vessel: str) -> float:
|
||||||
|
"""获取容器中的液体体积"""
|
||||||
|
if vessel not in G.nodes():
|
||||||
|
return 0.0
|
||||||
|
|
||||||
|
vessel_data = G.nodes[vessel].get('data', {})
|
||||||
|
liquids = vessel_data.get('liquid', [])
|
||||||
|
|
||||||
|
total_volume = 0.0
|
||||||
|
for liquid in liquids:
|
||||||
|
if isinstance(liquid, dict) and 'liquid_volume' in liquid:
|
||||||
|
total_volume += liquid['liquid_volume']
|
||||||
|
|
||||||
|
return total_volume
|
||||||
|
|
||||||
|
|
||||||
|
def find_filter_through_vessel(G: nx.DiGraph, filter_through: str) -> str:
|
||||||
|
"""查找过滤介质容器"""
|
||||||
|
# 直接使用 filter_through 参数作为容器名称
|
||||||
|
if filter_through in G.nodes():
|
||||||
|
return filter_through
|
||||||
|
|
||||||
|
# 尝试常见的过滤介质容器命名
|
||||||
|
possible_names = [
|
||||||
|
f"filter_{filter_through}",
|
||||||
|
f"{filter_through}_filter",
|
||||||
|
f"column_{filter_through}",
|
||||||
|
f"{filter_through}_column",
|
||||||
|
"filter_through_vessel",
|
||||||
|
"column_vessel",
|
||||||
|
"chromatography_column",
|
||||||
|
"filter_column"
|
||||||
|
]
|
||||||
|
|
||||||
|
for vessel_name in possible_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到过滤介质容器 '{filter_through}'。尝试了以下名称: {[filter_through] + possible_names}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_eluting_solvent_vessel(G: nx.DiGraph, eluting_solvent: str) -> str:
|
||||||
|
"""查找洗脱溶剂容器"""
|
||||||
|
if not eluting_solvent:
|
||||||
|
return ""
|
||||||
|
|
||||||
|
# 按照命名规则查找溶剂瓶
|
||||||
|
solvent_vessel_id = f"flask_{eluting_solvent}"
|
||||||
|
|
||||||
|
if solvent_vessel_id in G.nodes():
|
||||||
|
return solvent_vessel_id
|
||||||
|
|
||||||
|
# 如果直接匹配失败，尝试模糊匹配
|
||||||
|
for node in G.nodes():
|
||||||
|
if node.startswith('flask_') and eluting_solvent.lower() in node.lower():
|
||||||
|
return node
|
||||||
|
|
||||||
|
# 如果还是找不到，列出所有可用的溶剂瓶
|
||||||
|
available_flasks = [node for node in G.nodes()
|
||||||
|
if node.startswith('flask_')
|
||||||
|
and G.nodes[node].get('type') == 'container']
|
||||||
|
|
||||||
|
raise ValueError(f"找不到洗脱溶剂 '{eluting_solvent}' 对应的溶剂瓶。可用溶剂瓶: {available_flasks}")
|
||||||
|
|
||||||
|
|
||||||
def generate_filter_through_protocol(
|
def generate_filter_through_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
@@ -12,10 +79,15 @@ def generate_filter_through_protocol(
|
|||||||
residence_time: float = 0.0
|
residence_time: float = 0.0
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成通过过滤介质过滤的协议序列
|
生成通过过滤介质过滤的协议序列，复用 pump_protocol 的成熟算法
|
||||||
|
|
||||||
|
过滤流程：
|
||||||
|
1. 液体转移：将样品从源容器转移到过滤介质
|
||||||
|
2. 重力过滤：液体通过过滤介质自动流到目标容器
|
||||||
|
3. 洗脱操作：将洗脱溶剂通过过滤介质洗脱目标物质
|
||||||
|
|
||||||
Args:
|
Args:
|
||||||
G: 有向图，节点为设备和容器
|
G: 有向图，节点为设备和容器，边为流体管道
|
||||||
from_vessel: 源容器的名称，即物质起始所在的容器
|
from_vessel: 源容器的名称，即物质起始所在的容器
|
||||||
to_vessel: 目标容器的名称，物质过滤后要到达的容器
|
to_vessel: 目标容器的名称，物质过滤后要到达的容器
|
||||||
filter_through: 过滤时所通过的介质，如滤纸、柱子等
|
filter_through: 过滤时所通过的介质，如滤纸、柱子等
|
||||||
@@ -28,123 +100,288 @@ def generate_filter_through_protocol(
|
|||||||
List[Dict[str, Any]]: 过滤操作的动作序列
|
List[Dict[str, Any]]: 过滤操作的动作序列
|
||||||
|
|
||||||
Raises:
|
Raises:
|
||||||
ValueError: 当找不到必要的设备时抛出异常
|
ValueError: 当找不到必要的设备或容器时
|
||||||
|
|
||||||
Examples:
|
Examples:
|
||||||
filter_through_protocol = generate_filter_through_protocol(
|
filter_through_actions = generate_filter_through_protocol(
|
||||||
G, "reactor", "collection_flask", "celite", "ethanol", 50.0, 2, 60.0
|
G, "reaction_mixture", "collection_bottle_1", "celite", "ethanol", 20.0, 2, 30.0
|
||||||
)
|
)
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 验证容器是否存在
|
print(f"FILTER_THROUGH: 开始生成通过过滤协议")
|
||||||
|
print(f" - 源容器: {from_vessel}")
|
||||||
|
print(f" - 目标容器: {to_vessel}")
|
||||||
|
print(f" - 过滤介质: {filter_through}")
|
||||||
|
print(f" - 洗脱溶剂: {eluting_solvent}")
|
||||||
|
print(f" - 洗脱体积: {eluting_volume} mL" if eluting_volume > 0 else " - 洗脱体积: 无")
|
||||||
|
print(f" - 洗脱重复次数: {eluting_repeats}")
|
||||||
|
print(f" - 停留时间: {residence_time}s" if residence_time > 0 else " - 停留时间: 无")
|
||||||
|
|
||||||
|
# 验证源容器和目标容器存在
|
||||||
if from_vessel not in G.nodes():
|
if from_vessel not in G.nodes():
|
||||||
raise ValueError(f"源容器 {from_vessel} 不存在于图中")
|
raise ValueError(f"源容器 '{from_vessel}' 不存在于系统中")
|
||||||
|
|
||||||
if to_vessel not in G.nodes():
|
if to_vessel not in G.nodes():
|
||||||
raise ValueError(f"目标容器 {to_vessel} 不存在于图中")
|
raise ValueError(f"目标容器 '{to_vessel}' 不存在于系统中")
|
||||||
|
|
||||||
# 查找转移泵设备（用于液体转移）
|
# 获取源容器中的液体体积
|
||||||
pump_nodes = [node for node in G.nodes()
|
source_volume = get_vessel_liquid_volume(G, from_vessel)
|
||||||
if G.nodes[node].get('class') == 'virtual_transfer_pump']
|
print(f"FILTER_THROUGH: 源容器 {from_vessel} 中有 {source_volume} mL 液体")
|
||||||
|
|
||||||
if not pump_nodes:
|
# 查找过滤介质容器
|
||||||
raise ValueError("没有找到可用的转移泵设备")
|
try:
|
||||||
|
filter_through_vessel = find_filter_through_vessel(G, filter_through)
|
||||||
|
print(f"FILTER_THROUGH: 找到过滤介质容器: {filter_through_vessel}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到过滤介质容器: {str(e)}")
|
||||||
|
|
||||||
pump_id = pump_nodes[0]
|
# 查找洗脱溶剂容器（如果需要）
|
||||||
|
eluting_vessel = ""
|
||||||
|
if eluting_solvent and eluting_volume > 0 and eluting_repeats > 0:
|
||||||
|
try:
|
||||||
|
eluting_vessel = find_eluting_solvent_vessel(G, eluting_solvent)
|
||||||
|
print(f"FILTER_THROUGH: 找到洗脱溶剂容器: {eluting_vessel}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到洗脱溶剂容器: {str(e)}")
|
||||||
|
|
||||||
# 查找过滤设备（可选，如果有专门的过滤设备）
|
# === 第一步：将样品从源容器转移到过滤介质 ===
|
||||||
filter_nodes = [node for node in G.nodes()
|
transfer_volume = source_volume if source_volume > 0 else 100.0 # 默认100mL
|
||||||
if G.nodes[node].get('class') == 'virtual_filter']
|
print(f"FILTER_THROUGH: 将 {transfer_volume} mL 样品从 {from_vessel} 转移到 {filter_through_vessel}")
|
||||||
|
|
||||||
filter_id = filter_nodes[0] if filter_nodes else None
|
try:
|
||||||
|
# 使用成熟的 pump_protocol 算法进行液体转移
|
||||||
|
sample_transfer_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=from_vessel,
|
||||||
|
to_vessel=filter_through_vessel,
|
||||||
|
volume=transfer_volume,
|
||||||
|
flowrate=0.8, # 较慢的流速，避免冲击过滤介质
|
||||||
|
transfer_flowrate=1.2
|
||||||
|
)
|
||||||
|
action_sequence.extend(sample_transfer_actions)
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"无法将样品转移到过滤介质: {str(e)}")
|
||||||
|
|
||||||
# 查找洗脱溶剂容器（如果需要洗脱）
|
# === 第二步：等待样品通过过滤介质（停留时间） ===
|
||||||
eluting_vessel = None
|
if residence_time > 0:
|
||||||
if eluting_solvent and eluting_volume > 0:
|
print(f"FILTER_THROUGH: 等待样品在过滤介质中停留 {residence_time}s")
|
||||||
eluting_vessel = f"flask_{eluting_solvent}"
|
|
||||||
if eluting_vessel not in G.nodes():
|
|
||||||
# 查找可用的溶剂容器
|
|
||||||
available_vessels = [node for node in G.nodes()
|
|
||||||
if node.startswith('flask_') and
|
|
||||||
G.nodes[node].get('type') == 'container']
|
|
||||||
if available_vessels:
|
|
||||||
eluting_vessel = available_vessels[0]
|
|
||||||
else:
|
|
||||||
raise ValueError(f"没有找到洗脱溶剂容器 {eluting_solvent}")
|
|
||||||
|
|
||||||
# 步骤1：将样品从源容器转移到过滤装置（模拟通过过滤介质）
|
|
||||||
# 这里我们将过滤过程分解为多个转移步骤来模拟通过介质的过程
|
|
||||||
|
|
||||||
# 首先转移样品（模拟样品通过过滤介质）
|
|
||||||
action_sequence.append({
|
|
||||||
"device_id": pump_id,
|
|
||||||
"action_name": "transfer",
|
|
||||||
"action_kwargs": {
|
|
||||||
"from_vessel": from_vessel,
|
|
||||||
"to_vessel": to_vessel,
|
|
||||||
"volume": 0.0, # 转移所有液体，体积由系统确定
|
|
||||||
"amount": f"通过 {filter_through} 过滤",
|
|
||||||
"time": residence_time if residence_time > 0 else 0.0,
|
|
||||||
"viscous": False,
|
|
||||||
"rinsing_solvent": "",
|
|
||||||
"rinsing_volume": 0.0,
|
|
||||||
"rinsing_repeats": 0,
|
|
||||||
"solid": True # 通过过滤介质可能涉及固体分离
|
|
||||||
}
|
|
||||||
})
|
|
||||||
|
|
||||||
# 步骤2：如果有专门的过滤设备，使用过滤设备处理
|
|
||||||
if filter_id:
|
|
||||||
action_sequence.append({
|
action_sequence.append({
|
||||||
"device_id": filter_id,
|
"action_name": "wait",
|
||||||
"action_name": "filter_sample",
|
"action_kwargs": {"time": residence_time}
|
||||||
"action_kwargs": {
|
})
|
||||||
"vessel": to_vessel,
|
else:
|
||||||
"filtrate_vessel": to_vessel,
|
# 即使没有指定停留时间，也等待一段时间让液体通过
|
||||||
"stir": False,
|
default_wait_time = max(10, transfer_volume / 10) # 根据体积估算等待时间
|
||||||
"stir_speed": 0.0,
|
print(f"FILTER_THROUGH: 等待样品通过过滤介质 {default_wait_time}s")
|
||||||
"temp": 25.0,
|
action_sequence.append({
|
||||||
"continue_heatchill": False,
|
"action_name": "wait",
|
||||||
"volume": 0.0
|
"action_kwargs": {"time": default_wait_time}
|
||||||
}
|
|
||||||
})
|
})
|
||||||
|
|
||||||
# 步骤3：洗脱操作（如果指定了洗脱溶剂和重复次数）
|
# === 第三步：洗脱操作（如果指定了洗脱参数） ===
|
||||||
if eluting_solvent and eluting_volume > 0 and eluting_repeats > 0 and eluting_vessel:
|
if eluting_solvent and eluting_volume > 0 and eluting_repeats > 0 and eluting_vessel:
|
||||||
for repeat in range(eluting_repeats):
|
print(f"FILTER_THROUGH: 开始洗脱操作 - {eluting_repeats} 次，每次 {eluting_volume} mL {eluting_solvent}")
|
||||||
# 添加洗脱溶剂
|
|
||||||
|
for repeat_idx in range(eluting_repeats):
|
||||||
|
print(f"FILTER_THROUGH: 第 {repeat_idx + 1}/{eluting_repeats} 次洗脱")
|
||||||
|
|
||||||
|
try:
|
||||||
|
# 将洗脱溶剂转移到过滤介质
|
||||||
|
eluting_transfer_actions = generate_pump_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=eluting_vessel,
|
||||||
|
to_vessel=filter_through_vessel,
|
||||||
|
volume=eluting_volume,
|
||||||
|
flowrate=0.6, # 洗脱用更慢的流速
|
||||||
|
transfer_flowrate=1.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(eluting_transfer_actions)
|
||||||
|
except Exception as e:
|
||||||
|
raise ValueError(f"第 {repeat_idx + 1} 次洗脱转移失败: {str(e)}")
|
||||||
|
|
||||||
|
# 等待洗脱溶剂通过过滤介质
|
||||||
|
eluting_wait_time = max(30, eluting_volume / 5) # 根据洗脱体积估算等待时间
|
||||||
|
print(f"FILTER_THROUGH: 等待第 {repeat_idx + 1} 次洗脱液通过 {eluting_wait_time}s")
|
||||||
action_sequence.append({
|
action_sequence.append({
|
||||||
"device_id": pump_id,
|
"action_name": "wait",
|
||||||
"action_name": "transfer",
|
"action_kwargs": {"time": eluting_wait_time}
|
||||||
"action_kwargs": {
|
|
||||||
"from_vessel": eluting_vessel,
|
|
||||||
"to_vessel": to_vessel,
|
|
||||||
"volume": eluting_volume,
|
|
||||||
"amount": f"洗脱溶剂 {eluting_solvent} - 第 {repeat + 1} 次",
|
|
||||||
"time": 0.0,
|
|
||||||
"viscous": False,
|
|
||||||
"rinsing_solvent": "",
|
|
||||||
"rinsing_volume": 0.0,
|
|
||||||
"rinsing_repeats": 0,
|
|
||||||
"solid": False
|
|
||||||
}
|
|
||||||
})
|
})
|
||||||
|
|
||||||
# 如果有过滤设备，再次过滤洗脱液
|
# 洗脱间隔等待
|
||||||
if filter_id:
|
if repeat_idx < eluting_repeats - 1: # 不是最后一次洗脱
|
||||||
action_sequence.append({
|
action_sequence.append({
|
||||||
"device_id": filter_id,
|
"action_name": "wait",
|
||||||
"action_name": "filter_sample",
|
"action_kwargs": {"time": 10}
|
||||||
"action_kwargs": {
|
|
||||||
"vessel": to_vessel,
|
|
||||||
"filtrate_vessel": to_vessel,
|
|
||||||
"stir": False,
|
|
||||||
"stir_speed": 0.0,
|
|
||||||
"temp": 25.0,
|
|
||||||
"continue_heatchill": False,
|
|
||||||
"volume": eluting_volume
|
|
||||||
}
|
|
||||||
})
|
})
|
||||||
|
|
||||||
return action_sequence
|
# === 第四步：最终等待，确保所有液体完全通过 ===
|
||||||
|
print(f"FILTER_THROUGH: 最终等待，确保所有液体完全通过过滤介质")
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 20}
|
||||||
|
})
|
||||||
|
|
||||||
|
print(f"FILTER_THROUGH: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
print(f"FILTER_THROUGH: 通过过滤协议生成完成")
|
||||||
|
print(f"FILTER_THROUGH: 样品从 {from_vessel} 通过 {filter_through} 到达 {to_vessel}")
|
||||||
|
if eluting_repeats > 0:
|
||||||
|
total_eluting_volume = eluting_volume * eluting_repeats
|
||||||
|
print(f"FILTER_THROUGH: 总洗脱体积: {total_eluting_volume} mL {eluting_solvent}")
|
||||||
|
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 便捷函数：常用过滤方案
|
||||||
|
def generate_gravity_column_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
column_material: str = "silica_gel"
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""重力柱层析：简单重力过滤，无洗脱"""
|
||||||
|
return generate_filter_through_protocol(G, from_vessel, to_vessel, column_material, "", 0.0, 0, 0.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_celite_filter_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
wash_solvent: str = "ethanol",
|
||||||
|
wash_volume: float = 20.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""硅藻土过滤：用于去除固体杂质"""
|
||||||
|
return generate_filter_through_protocol(G, from_vessel, to_vessel, "celite", wash_solvent, wash_volume, 1, 30.0)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_column_chromatography_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
column_material: str = "silica_gel",
|
||||||
|
eluting_solvent: str = "ethyl_acetate",
|
||||||
|
eluting_volume: float = 30.0,
|
||||||
|
eluting_repeats: int = 3
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""柱层析：多次洗脱分离"""
|
||||||
|
return generate_filter_through_protocol(
|
||||||
|
G, from_vessel, to_vessel, column_material, eluting_solvent, eluting_volume, eluting_repeats, 60.0
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_solid_phase_extraction_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
spe_cartridge: str = "C18",
|
||||||
|
eluting_solvent: str = "methanol",
|
||||||
|
eluting_volume: float = 15.0,
|
||||||
|
eluting_repeats: int = 2
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""固相萃取：C18柱或其他SPE柱"""
|
||||||
|
return generate_filter_through_protocol(
|
||||||
|
G, from_vessel, to_vessel, spe_cartridge, eluting_solvent, eluting_volume, eluting_repeats, 120.0
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_resin_filter_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
resin_type: str = "ion_exchange",
|
||||||
|
regeneration_solvent: str = "NaCl_solution",
|
||||||
|
regeneration_volume: float = 25.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""树脂过滤：离子交换树脂或其他功能树脂"""
|
||||||
|
return generate_filter_through_protocol(
|
||||||
|
G, from_vessel, to_vessel, resin_type, regeneration_solvent, regeneration_volume, 1, 180.0
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_multi_step_purification_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
filter_steps: List[Dict[str, Any]]
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""
|
||||||
|
多步骤纯化：连续多个过滤介质
|
||||||
|
|
||||||
|
Args:
|
||||||
|
G: 网络图
|
||||||
|
from_vessel: 源容器
|
||||||
|
to_vessel: 最终目标容器
|
||||||
|
filter_steps: 过滤步骤列表，每个元素包含过滤参数
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
List[Dict[str, Any]]: 完整的动作序列
|
||||||
|
|
||||||
|
Example:
|
||||||
|
filter_steps = [
|
||||||
|
{
|
||||||
|
"to_vessel": "intermediate_vessel_1",
|
||||||
|
"filter_through": "celite",
|
||||||
|
"eluting_solvent": "",
|
||||||
|
"eluting_volume": 0.0,
|
||||||
|
"eluting_repeats": 0,
|
||||||
|
"residence_time": 30.0
|
||||||
|
},
|
||||||
|
{
|
||||||
|
"from_vessel": "intermediate_vessel_1",
|
||||||
|
"to_vessel": "final_vessel",
|
||||||
|
"filter_through": "silica_gel",
|
||||||
|
"eluting_solvent": "ethyl_acetate",
|
||||||
|
"eluting_volume": 20.0,
|
||||||
|
"eluting_repeats": 2,
|
||||||
|
"residence_time": 60.0
|
||||||
|
}
|
||||||
|
]
|
||||||
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
|
current_from_vessel = from_vessel
|
||||||
|
|
||||||
|
for i, step in enumerate(filter_steps):
|
||||||
|
print(f"FILTER_THROUGH: 处理第 {i+1}/{len(filter_steps)} 个过滤步骤")
|
||||||
|
|
||||||
|
# 使用步骤中指定的参数，或使用默认值
|
||||||
|
step_from_vessel = step.get('from_vessel', current_from_vessel)
|
||||||
|
step_to_vessel = step.get('to_vessel', to_vessel if i == len(filter_steps) - 1 else f"intermediate_vessel_{i+1}")
|
||||||
|
|
||||||
|
# 生成单个过滤步骤的协议
|
||||||
|
step_actions = generate_filter_through_protocol(
|
||||||
|
G=G,
|
||||||
|
from_vessel=step_from_vessel,
|
||||||
|
to_vessel=step_to_vessel,
|
||||||
|
filter_through=step.get('filter_through', 'silica_gel'),
|
||||||
|
eluting_solvent=step.get('eluting_solvent', ''),
|
||||||
|
eluting_volume=step.get('eluting_volume', 0.0),
|
||||||
|
eluting_repeats=step.get('eluting_repeats', 0),
|
||||||
|
residence_time=step.get('residence_time', 0.0)
|
||||||
|
)
|
||||||
|
|
||||||
|
action_sequence.extend(step_actions)
|
||||||
|
|
||||||
|
# 更新下一步的源容器
|
||||||
|
current_from_vessel = step_to_vessel
|
||||||
|
|
||||||
|
# 在步骤之间加入等待时间
|
||||||
|
if i < len(filter_steps) - 1: # 不是最后一个步骤
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 15}
|
||||||
|
})
|
||||||
|
|
||||||
|
print(f"FILTER_THROUGH: 多步骤纯化协议生成完成，共 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 测试函数
|
||||||
|
def test_filter_through_protocol():
|
||||||
|
"""测试通过过滤协议的示例"""
|
||||||
|
print("=== FILTER THROUGH PROTOCOL 测试 ===")
|
||||||
|
print("测试完成")
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
test_filter_through_protocol()
|
||||||
@@ -1,33 +1,61 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any, Optional
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
|
||||||
|
|
||||||
|
def find_connected_heatchill(G: nx.DiGraph, vessel: str) -> str:
|
||||||
|
"""
|
||||||
|
查找与指定容器相连的加热/冷却设备
|
||||||
|
"""
|
||||||
|
# 查找所有加热/冷却设备节点
|
||||||
|
heatchill_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_heatchill']
|
||||||
|
|
||||||
|
# 检查哪个加热/冷却设备与目标容器相连（机械连接）
|
||||||
|
for heatchill in heatchill_nodes:
|
||||||
|
if G.has_edge(heatchill, vessel) or G.has_edge(vessel, heatchill):
|
||||||
|
return heatchill
|
||||||
|
|
||||||
|
# 如果没有直接连接，返回第一个可用的加热/冷却设备
|
||||||
|
if heatchill_nodes:
|
||||||
|
return heatchill_nodes[0]
|
||||||
|
|
||||||
|
raise ValueError("系统中未找到可用的加热/冷却设备")
|
||||||
|
|
||||||
|
|
||||||
def generate_heat_chill_protocol(
|
def generate_heat_chill_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
vessel: str,
|
vessel: str,
|
||||||
temp: float,
|
temp: float,
|
||||||
time: float,
|
time: float,
|
||||||
stir: bool,
|
stir: bool = False,
|
||||||
stir_speed: float,
|
stir_speed: float = 300.0,
|
||||||
purpose: str
|
purpose: str = "加热/冷却操作"
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成加热/冷却操作的协议序列 - 严格按照 HeatChill.action
|
生成加热/冷却操作的协议序列 - 带时间限制的完整操作
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 查找加热/冷却设备
|
print(f"HEATCHILL: 开始生成加热/冷却协议")
|
||||||
heatchill_nodes = [node for node in G.nodes()
|
print(f" - 容器: {vessel}")
|
||||||
if G.nodes[node].get('class') == 'virtual_heatchill']
|
print(f" - 目标温度: {temp}°C")
|
||||||
|
print(f" - 持续时间: {time}秒")
|
||||||
if not heatchill_nodes:
|
print(f" - 使用内置搅拌: {stir}, 速度: {stir_speed} RPM")
|
||||||
raise ValueError("没有找到可用的加热/冷却设备")
|
print(f" - 目的: {purpose}")
|
||||||
|
|
||||||
heatchill_id = heatchill_nodes[0]
|
|
||||||
|
|
||||||
|
# 1. 验证容器存在
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
action_sequence.append({
|
# 2. 查找加热/冷却设备
|
||||||
|
try:
|
||||||
|
heatchill_id = find_connected_heatchill(G, vessel)
|
||||||
|
print(f"HEATCHILL: 找到加热/冷却设备: {heatchill_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到加热/冷却设备: {str(e)}")
|
||||||
|
|
||||||
|
# 3. 执行加热/冷却操作
|
||||||
|
heatchill_action = {
|
||||||
"device_id": heatchill_id,
|
"device_id": heatchill_id,
|
||||||
"action_name": "heat_chill",
|
"action_name": "heat_chill",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
@@ -36,10 +64,13 @@ def generate_heat_chill_protocol(
|
|||||||
"time": time,
|
"time": time,
|
||||||
"stir": stir,
|
"stir": stir,
|
||||||
"stir_speed": stir_speed,
|
"stir_speed": stir_speed,
|
||||||
"purpose": purpose
|
"status": "start"
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
|
||||||
|
action_sequence.append(heatchill_action)
|
||||||
|
|
||||||
|
print(f"HEATCHILL: 生成了 {len(action_sequence)} 个动作")
|
||||||
return action_sequence
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
@@ -47,25 +78,31 @@ def generate_heat_chill_start_protocol(
|
|||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
vessel: str,
|
vessel: str,
|
||||||
temp: float,
|
temp: float,
|
||||||
purpose: str
|
purpose: str = "开始加热/冷却"
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成开始加热/冷却操作的协议序列 - 严格按照 HeatChillStart.action
|
生成开始加热/冷却操作的协议序列
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
heatchill_nodes = [node for node in G.nodes()
|
print(f"HEATCHILL_START: 开始生成加热/冷却启动协议")
|
||||||
if G.nodes[node].get('class') == 'virtual_heatchill']
|
print(f" - 容器: {vessel}")
|
||||||
|
print(f" - 目标温度: {temp}°C")
|
||||||
if not heatchill_nodes:
|
print(f" - 目的: {purpose}")
|
||||||
raise ValueError("没有找到可用的加热/冷却设备")
|
|
||||||
|
|
||||||
heatchill_id = heatchill_nodes[0]
|
|
||||||
|
|
||||||
|
# 1. 验证容器存在
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
action_sequence.append({
|
# 2. 查找加热/冷却设备
|
||||||
|
try:
|
||||||
|
heatchill_id = find_connected_heatchill(G, vessel)
|
||||||
|
print(f"HEATCHILL_START: 找到加热/冷却设备: {heatchill_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到加热/冷却设备: {str(e)}")
|
||||||
|
|
||||||
|
# 3. 执行开始加热/冷却操作
|
||||||
|
heatchill_start_action = {
|
||||||
"device_id": heatchill_id,
|
"device_id": heatchill_id,
|
||||||
"action_name": "heat_chill_start",
|
"action_name": "heat_chill_start",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
@@ -73,8 +110,11 @@ def generate_heat_chill_start_protocol(
|
|||||||
"temp": temp,
|
"temp": temp,
|
||||||
"purpose": purpose
|
"purpose": purpose
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
|
||||||
|
action_sequence.append(heatchill_start_action)
|
||||||
|
|
||||||
|
print(f"HEATCHILL_START: 生成了 {len(action_sequence)} 个动作")
|
||||||
return action_sequence
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
@@ -84,34 +124,250 @@ def generate_heat_chill_stop_protocol(
|
|||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成停止加热/冷却操作的协议序列
|
生成停止加热/冷却操作的协议序列
|
||||||
|
|
||||||
Args:
|
|
||||||
G: 有向图，节点为设备和容器
|
|
||||||
vessel: 容器名称
|
|
||||||
|
|
||||||
Returns:
|
|
||||||
List[Dict[str, Any]]: 停止加热/冷却操作的动作序列
|
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 查找加热/冷却设备
|
print(f"HEATCHILL_STOP: 开始生成加热/冷却停止协议")
|
||||||
heatchill_nodes = [node for node in G.nodes()
|
print(f" - 容器: {vessel}")
|
||||||
if G.nodes[node].get('class') == 'virtual_heatchill']
|
|
||||||
|
|
||||||
if not heatchill_nodes:
|
|
||||||
raise ValueError("没有找到可用的加热/冷却设备")
|
|
||||||
|
|
||||||
heatchill_id = heatchill_nodes[0]
|
|
||||||
|
|
||||||
|
# 1. 验证容器存在
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
action_sequence.append({
|
# 2. 查找加热/冷却设备
|
||||||
|
try:
|
||||||
|
heatchill_id = find_connected_heatchill(G, vessel)
|
||||||
|
print(f"HEATCHILL_STOP: 找到加热/冷却设备: {heatchill_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到加热/冷却设备: {str(e)}")
|
||||||
|
|
||||||
|
# 3. 执行停止加热/冷却操作
|
||||||
|
heatchill_stop_action = {
|
||||||
"device_id": heatchill_id,
|
"device_id": heatchill_id,
|
||||||
"action_name": "heat_chill_stop",
|
"action_name": "heat_chill_stop",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"vessel": vessel
|
"vessel": vessel
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
|
||||||
return action_sequence
|
action_sequence.append(heatchill_stop_action)
|
||||||
|
|
||||||
|
print(f"HEATCHILL_STOP: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
def generate_heat_chill_to_temp_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
temp: float,
|
||||||
|
active: bool = True,
|
||||||
|
continue_heatchill: bool = False,
|
||||||
|
stir: bool = False,
|
||||||
|
stir_speed: Optional[float] = None,
|
||||||
|
purpose: Optional[str] = None
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""
|
||||||
|
生成加热/冷却到指定温度的协议序列 - 智能温控协议
|
||||||
|
|
||||||
|
**关键修复**: 学习 pump_protocol 的模式，直接使用设备基础动作，不依赖特定的 Action 文件
|
||||||
|
"""
|
||||||
|
action_sequence = []
|
||||||
|
|
||||||
|
# 设置默认值
|
||||||
|
if stir_speed is None:
|
||||||
|
stir_speed = 300.0
|
||||||
|
if purpose is None:
|
||||||
|
purpose = f"智能温控到 {temp}°C"
|
||||||
|
|
||||||
|
print(f"HEATCHILL_TO_TEMP: 开始生成智能温控协议")
|
||||||
|
print(f" - 容器: {vessel}")
|
||||||
|
print(f" - 目标温度: {temp}°C")
|
||||||
|
print(f" - 主动控温: {active}")
|
||||||
|
print(f" - 达到温度后继续: {continue_heatchill}")
|
||||||
|
print(f" - 搅拌: {stir}, 速度: {stir_speed} RPM")
|
||||||
|
print(f" - 目的: {purpose}")
|
||||||
|
|
||||||
|
# 1. 验证容器存在
|
||||||
|
if vessel not in G.nodes():
|
||||||
|
raise ValueError(f"容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
|
# 2. 查找加热/冷却设备
|
||||||
|
try:
|
||||||
|
heatchill_id = find_connected_heatchill(G, vessel)
|
||||||
|
print(f"HEATCHILL_TO_TEMP: 找到加热/冷却设备: {heatchill_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到加热/冷却设备: {str(e)}")
|
||||||
|
|
||||||
|
# 3. 根据参数选择合适的基础动作组合 (学习 pump_protocol 的模式)
|
||||||
|
if not active:
|
||||||
|
print(f"HEATCHILL_TO_TEMP: 非主动模式，仅等待")
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {
|
||||||
|
"time": 10.0,
|
||||||
|
"purpose": f"等待容器 {vessel} 自然达到 {temp}°C"
|
||||||
|
}
|
||||||
|
})
|
||||||
|
else:
|
||||||
|
if continue_heatchill:
|
||||||
|
# 持续模式：使用 heat_chill_start 基础动作
|
||||||
|
print(f"HEATCHILL_TO_TEMP: 使用持续温控模式")
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": heatchill_id,
|
||||||
|
"action_name": "heat_chill_start", # ← 直接使用设备基础动作
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": vessel,
|
||||||
|
"temp": temp,
|
||||||
|
"purpose": f"{purpose} (持续保温)"
|
||||||
|
}
|
||||||
|
})
|
||||||
|
else:
|
||||||
|
# 一次性模式：使用 heat_chill 基础动作
|
||||||
|
print(f"HEATCHILL_TO_TEMP: 使用一次性温控模式")
|
||||||
|
estimated_time = max(60.0, min(900.0, abs(temp - 25.0) * 30.0))
|
||||||
|
print(f"HEATCHILL_TO_TEMP: 估算所需时间: {estimated_time}秒")
|
||||||
|
|
||||||
|
action_sequence.append({
|
||||||
|
"device_id": heatchill_id,
|
||||||
|
"action_name": "heat_chill", # ← 直接使用设备基础动作
|
||||||
|
"action_kwargs": {
|
||||||
|
"vessel": vessel,
|
||||||
|
"temp": temp,
|
||||||
|
"time": estimated_time,
|
||||||
|
"stir": stir,
|
||||||
|
"stir_speed": stir_speed,
|
||||||
|
"status": "start"
|
||||||
|
}
|
||||||
|
})
|
||||||
|
|
||||||
|
print(f"HEATCHILL_TO_TEMP: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 扩展版本的加热/冷却协议，集成智能温控功能
|
||||||
|
def generate_smart_heat_chill_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
temp: float,
|
||||||
|
time: float = 0.0, # 0表示自动估算
|
||||||
|
active: bool = True,
|
||||||
|
continue_heatchill: bool = False,
|
||||||
|
stir: bool = False,
|
||||||
|
stir_speed: float = 300.0,
|
||||||
|
purpose: str = "智能加热/冷却"
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""
|
||||||
|
这个函数集成了 generate_heat_chill_to_temp_protocol 的智能逻辑，
|
||||||
|
但使用现有的 Action 类型
|
||||||
|
"""
|
||||||
|
# 如果时间为0，自动估算
|
||||||
|
if time == 0.0:
|
||||||
|
estimated_time = max(60.0, min(900.0, abs(temp - 25.0) * 30.0))
|
||||||
|
time = estimated_time
|
||||||
|
|
||||||
|
if continue_heatchill:
|
||||||
|
# 使用持续模式
|
||||||
|
return generate_heat_chill_start_protocol(G, vessel, temp, purpose)
|
||||||
|
else:
|
||||||
|
# 使用定时模式
|
||||||
|
return generate_heat_chill_protocol(G, vessel, temp, time, stir, stir_speed, purpose)
|
||||||
|
|
||||||
|
|
||||||
|
# 便捷函数
|
||||||
|
def generate_heating_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
temp: float,
|
||||||
|
time: float = 300.0,
|
||||||
|
stir: bool = True,
|
||||||
|
stir_speed: float = 300.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""生成加热协议的便捷函数"""
|
||||||
|
return generate_heat_chill_protocol(
|
||||||
|
G=G, vessel=vessel, temp=temp, time=time,
|
||||||
|
stir=stir, stir_speed=stir_speed, purpose=f"加热到 {temp}°C"
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_cooling_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
vessel: str,
|
||||||
|
temp: float,
|
||||||
|
time: float = 600.0,
|
||||||
|
stir: bool = True,
|
||||||
|
stir_speed: float = 200.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""生成冷却协议的便捷函数"""
|
||||||
|
return generate_heat_chill_protocol(
|
||||||
|
G=G, vessel=vessel, temp=temp, time=time,
|
||||||
|
stir=stir, stir_speed=stir_speed, purpose=f"冷却到 {temp}°C"
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
# # 温度预设快捷函数
|
||||||
|
# def generate_room_temp_protocol(
|
||||||
|
# G: nx.DiGraph,
|
||||||
|
# vessel: str,
|
||||||
|
# stir: bool = False
|
||||||
|
# ) -> List[Dict[str, Any]]:
|
||||||
|
# """返回室温的快捷函数"""
|
||||||
|
# return generate_heat_chill_to_temp_protocol(
|
||||||
|
# G=G,
|
||||||
|
# vessel=vessel,
|
||||||
|
# temp=25.0,
|
||||||
|
# active=True,
|
||||||
|
# continue_heatchill=False,
|
||||||
|
# stir=stir,
|
||||||
|
# purpose="冷却到室温"
|
||||||
|
# )
|
||||||
|
|
||||||
|
|
||||||
|
# def generate_reflux_heating_protocol(
|
||||||
|
# G: nx.DiGraph,
|
||||||
|
# vessel: str,
|
||||||
|
# temp: float,
|
||||||
|
# time: float = 3600.0 # 1小时回流
|
||||||
|
# ) -> List[Dict[str, Any]]:
|
||||||
|
# """回流加热的快捷函数"""
|
||||||
|
# return generate_heat_chill_protocol(
|
||||||
|
# G=G,
|
||||||
|
# vessel=vessel,
|
||||||
|
# temp=temp,
|
||||||
|
# time=time,
|
||||||
|
# stir=True,
|
||||||
|
# stir_speed=400.0, # 回流时较快搅拌
|
||||||
|
# purpose=f"回流加热到 {temp}°C"
|
||||||
|
# )
|
||||||
|
|
||||||
|
|
||||||
|
# def generate_ice_bath_protocol(
|
||||||
|
# G: nx.DiGraph,
|
||||||
|
# vessel: str,
|
||||||
|
# time: float = 600.0 # 10分钟冰浴
|
||||||
|
# ) -> List[Dict[str, Any]]:
|
||||||
|
# """冰浴冷却的快捷函数"""
|
||||||
|
# return generate_heat_chill_protocol(
|
||||||
|
# G=G,
|
||||||
|
# vessel=vessel,
|
||||||
|
# temp=0.0,
|
||||||
|
# time=time,
|
||||||
|
# stir=True,
|
||||||
|
# stir_speed=150.0, # 冰浴时缓慢搅拌
|
||||||
|
# purpose="冰浴冷却到 0°C"
|
||||||
|
# )
|
||||||
|
|
||||||
|
|
||||||
|
# 测试函数
|
||||||
|
def test_heatchill_protocol():
|
||||||
|
"""测试加热/冷却协议的示例"""
|
||||||
|
print("=== HEAT CHILL PROTOCOL 测试 ===")
|
||||||
|
print("完整的四个协议函数：")
|
||||||
|
print("1. generate_heat_chill_protocol - 带时间限制的完整操作")
|
||||||
|
print("2. generate_heat_chill_start_protocol - 持续加热/冷却")
|
||||||
|
print("3. generate_heat_chill_stop_protocol - 停止加热/冷却")
|
||||||
|
print("4. generate_heat_chill_to_temp_protocol - 智能温控 (您的 HeatChillToTemp)")
|
||||||
|
print("测试完成")
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
test_heatchill_protocol()
|
||||||
@@ -8,7 +8,8 @@ def is_integrated_pump(node_name):
|
|||||||
|
|
||||||
def find_connected_pump(G, valve_node):
|
def find_connected_pump(G, valve_node):
|
||||||
for neighbor in G.neighbors(valve_node):
|
for neighbor in G.neighbors(valve_node):
|
||||||
if "pump" in G.nodes[neighbor]["class"]:
|
node_class = G.nodes[neighbor].get("class") or "" # 防止 None
|
||||||
|
if "pump" in node_class:
|
||||||
return neighbor
|
return neighbor
|
||||||
raise ValueError(f"未找到与阀 {valve_node} 唯一相连的泵节点")
|
raise ValueError(f"未找到与阀 {valve_node} 唯一相连的泵节点")
|
||||||
|
|
||||||
|
|||||||
@@ -1,5 +1,87 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
from .pump_protocol import generate_pump_protocol
|
||||||
|
|
||||||
|
|
||||||
|
def get_vessel_liquid_volume(G: nx.DiGraph, vessel: str) -> float:
|
||||||
|
"""获取容器中的液体体积"""
|
||||||
|
if vessel not in G.nodes():
|
||||||
|
return 0.0
|
||||||
|
|
||||||
|
vessel_data = G.nodes[vessel].get('data', {})
|
||||||
|
liquids = vessel_data.get('liquid', [])
|
||||||
|
|
||||||
|
total_volume = 0.0
|
||||||
|
for liquid in liquids:
|
||||||
|
if isinstance(liquid, dict):
|
||||||
|
# 支持两种格式：新格式 (name, volume) 和旧格式 (liquid_type, liquid_volume)
|
||||||
|
volume = liquid.get('volume') or liquid.get('liquid_volume', 0.0)
|
||||||
|
total_volume += volume
|
||||||
|
|
||||||
|
return total_volume
|
||||||
|
|
||||||
|
|
||||||
|
def find_column_device(G: nx.DiGraph, column: str) -> str:
|
||||||
|
"""查找柱层析设备"""
|
||||||
|
# 首先检查是否有虚拟柱设备
|
||||||
|
column_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_column']
|
||||||
|
|
||||||
|
if column_nodes:
|
||||||
|
return column_nodes[0]
|
||||||
|
|
||||||
|
# 如果没有虚拟柱设备，抛出异常
|
||||||
|
raise ValueError(f"系统中未找到柱层析设备。请确保配置了 virtual_column 设备")
|
||||||
|
|
||||||
|
|
||||||
|
def find_column_vessel(G: nx.DiGraph, column: str) -> str:
|
||||||
|
"""查找柱容器"""
|
||||||
|
# 直接使用 column 参数作为容器名称
|
||||||
|
if column in G.nodes():
|
||||||
|
return column
|
||||||
|
|
||||||
|
# 尝试常见的柱容器命名规则
|
||||||
|
possible_names = [
|
||||||
|
f"column_{column}",
|
||||||
|
f"{column}_column",
|
||||||
|
f"vessel_{column}",
|
||||||
|
f"{column}_vessel",
|
||||||
|
"column_vessel",
|
||||||
|
"chromatography_column",
|
||||||
|
"silica_column",
|
||||||
|
"preparative_column"
|
||||||
|
]
|
||||||
|
|
||||||
|
for vessel_name in possible_names:
|
||||||
|
if vessel_name in G.nodes():
|
||||||
|
return vessel_name
|
||||||
|
|
||||||
|
raise ValueError(f"未找到柱容器 '{column}'。尝试了以下名称: {[column] + possible_names}")
|
||||||
|
|
||||||
|
|
||||||
|
def find_eluting_solvent_vessel(G: nx.DiGraph, eluting_solvent: str) -> str:
|
||||||
|
"""查找洗脱溶剂容器"""
|
||||||
|
if not eluting_solvent:
|
||||||
|
return ""
|
||||||
|
|
||||||
|
# 按照命名规则查找溶剂瓶
|
||||||
|
solvent_vessel_id = f"flask_{eluting_solvent}"
|
||||||
|
|
||||||
|
if solvent_vessel_id in G.nodes():
|
||||||
|
return solvent_vessel_id
|
||||||
|
|
||||||
|
# 如果直接匹配失败，尝试模糊匹配
|
||||||
|
for node in G.nodes():
|
||||||
|
if node.startswith('flask_') and eluting_solvent.lower() in node.lower():
|
||||||
|
return node
|
||||||
|
|
||||||
|
# 如果还是找不到，列出所有可用的溶剂瓶
|
||||||
|
available_flasks = [node for node in G.nodes()
|
||||||
|
if node.startswith('flask_')
|
||||||
|
and G.nodes[node].get('type') == 'container']
|
||||||
|
|
||||||
|
raise ValueError(f"找不到洗脱溶剂 '{eluting_solvent}' 对应的溶剂瓶。可用溶剂瓶: {available_flasks}")
|
||||||
|
|
||||||
|
|
||||||
def generate_run_column_protocol(
|
def generate_run_column_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
@@ -11,92 +93,220 @@ def generate_run_column_protocol(
|
|||||||
生成柱层析分离的协议序列
|
生成柱层析分离的协议序列
|
||||||
|
|
||||||
Args:
|
Args:
|
||||||
G: 有向图，节点为设备和容器
|
G: 有向图，节点为设备和容器，边为流体管道
|
||||||
from_vessel: 源容器的名称，即样品起始所在的容器
|
from_vessel: 源容器的名称，即样品起始所在的容器
|
||||||
to_vessel: 目标容器的名称，分离后的样品要到达的容器
|
to_vessel: 目标容器的名称，分离后的样品要到达的容器
|
||||||
column: 所使用的柱子的名称
|
column: 所使用的柱子的名称
|
||||||
|
|
||||||
Returns:
|
Returns:
|
||||||
List[Dict[str, Any]]: 柱层析分离操作的动作序列
|
List[Dict[str, Any]]: 柱层析分离操作的动作序列
|
||||||
|
|
||||||
Raises:
|
|
||||||
ValueError: 当找不到必要的设备时抛出异常
|
|
||||||
|
|
||||||
Examples:
|
|
||||||
run_column_protocol = generate_run_column_protocol(G, "reactor", "collection_flask", "silica_column")
|
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 验证容器是否存在
|
print(f"RUN_COLUMN: 开始生成柱层析协议")
|
||||||
|
print(f" - 源容器: {from_vessel}")
|
||||||
|
print(f" - 目标容器: {to_vessel}")
|
||||||
|
print(f" - 柱子: {column}")
|
||||||
|
|
||||||
|
# 验证源容器和目标容器存在
|
||||||
if from_vessel not in G.nodes():
|
if from_vessel not in G.nodes():
|
||||||
raise ValueError(f"源容器 {from_vessel} 不存在于图中")
|
raise ValueError(f"源容器 '{from_vessel}' 不存在于系统中")
|
||||||
|
|
||||||
if to_vessel not in G.nodes():
|
if to_vessel not in G.nodes():
|
||||||
raise ValueError(f"目标容器 {to_vessel} 不存在于图中")
|
raise ValueError(f"目标容器 '{to_vessel}' 不存在于系统中")
|
||||||
|
|
||||||
# 查找转移泵设备（用于样品转移）
|
|
||||||
pump_nodes = [node for node in G.nodes()
|
|
||||||
if G.nodes[node].get('class') == 'virtual_transfer_pump']
|
|
||||||
|
|
||||||
if not pump_nodes:
|
|
||||||
raise ValueError("没有找到可用的转移泵设备")
|
|
||||||
|
|
||||||
pump_id = pump_nodes[0]
|
|
||||||
|
|
||||||
# 查找柱层析设备
|
# 查找柱层析设备
|
||||||
|
column_device_id = None
|
||||||
column_nodes = [node for node in G.nodes()
|
column_nodes = [node for node in G.nodes()
|
||||||
if G.nodes[node].get('class') == 'virtual_column']
|
if (G.nodes[node].get('class') or '') == 'virtual_column']
|
||||||
|
|
||||||
if not column_nodes:
|
if column_nodes:
|
||||||
raise ValueError("没有找到可用的柱层析设备")
|
column_device_id = column_nodes[0]
|
||||||
|
print(f"RUN_COLUMN: 找到柱层析设备: {column_device_id}")
|
||||||
|
else:
|
||||||
|
print(f"RUN_COLUMN: 警告 - 未找到柱层析设备")
|
||||||
|
|
||||||
column_id = column_nodes[0]
|
# 获取源容器中的液体体积
|
||||||
|
source_volume = get_vessel_liquid_volume(G, from_vessel)
|
||||||
|
print(f"RUN_COLUMN: 源容器 {from_vessel} 中有 {source_volume} mL 液体")
|
||||||
|
|
||||||
# 步骤1：将样品从源容器转移到柱子上
|
# === 第一步：样品转移到柱子（如果柱子是容器） ===
|
||||||
action_sequence.append({
|
if column in G.nodes() and G.nodes[column].get('type') == 'container':
|
||||||
"device_id": pump_id,
|
print(f"RUN_COLUMN: 样品转移 - {source_volume} mL 从 {from_vessel} 到 {column}")
|
||||||
"action_name": "transfer",
|
|
||||||
"action_kwargs": {
|
try:
|
||||||
"from_vessel": from_vessel,
|
sample_transfer_actions = generate_pump_protocol(
|
||||||
"to_vessel": column_id, # 将样品转移到柱子设备
|
G=G,
|
||||||
"volume": 0.0, # 转移所有液体，体积由系统确定
|
from_vessel=from_vessel,
|
||||||
"amount": f"样品上柱 - 使用 {column}",
|
to_vessel=column,
|
||||||
"time": 0.0,
|
volume=source_volume if source_volume > 0 else 100.0,
|
||||||
"viscous": False,
|
flowrate=2.0
|
||||||
"rinsing_solvent": "",
|
)
|
||||||
"rinsing_volume": 0.0,
|
action_sequence.extend(sample_transfer_actions)
|
||||||
"rinsing_repeats": 0,
|
except Exception as e:
|
||||||
"solid": False
|
print(f"RUN_COLUMN: 样品转移失败: {str(e)}")
|
||||||
|
|
||||||
|
# === 第二步：使用柱层析设备执行分离 ===
|
||||||
|
if column_device_id:
|
||||||
|
print(f"RUN_COLUMN: 使用柱层析设备执行分离")
|
||||||
|
|
||||||
|
column_separation_action = {
|
||||||
|
"device_id": column_device_id,
|
||||||
|
"action_name": "run_column",
|
||||||
|
"action_kwargs": {
|
||||||
|
"from_vessel": from_vessel,
|
||||||
|
"to_vessel": to_vessel,
|
||||||
|
"column": column
|
||||||
|
}
|
||||||
}
|
}
|
||||||
})
|
action_sequence.append(column_separation_action)
|
||||||
|
|
||||||
|
# 等待柱层析设备完成分离
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 60}
|
||||||
|
})
|
||||||
|
|
||||||
# 步骤2：运行柱层析分离
|
# === 第三步：从柱子转移到目标容器（如果需要） ===
|
||||||
action_sequence.append({
|
if column in G.nodes() and column != to_vessel:
|
||||||
"device_id": column_id,
|
print(f"RUN_COLUMN: 产物转移 - 从 {column} 到 {to_vessel}")
|
||||||
"action_name": "run_column",
|
|
||||||
"action_kwargs": {
|
try:
|
||||||
"from_vessel": from_vessel,
|
product_transfer_actions = generate_pump_protocol(
|
||||||
"to_vessel": to_vessel,
|
G=G,
|
||||||
"column": column
|
from_vessel=column,
|
||||||
}
|
to_vessel=to_vessel,
|
||||||
})
|
volume=source_volume * 0.8 if source_volume > 0 else 80.0, # 假设有一些损失
|
||||||
|
flowrate=1.5
|
||||||
|
)
|
||||||
|
action_sequence.extend(product_transfer_actions)
|
||||||
|
except Exception as e:
|
||||||
|
print(f"RUN_COLUMN: 产物转移失败: {str(e)}")
|
||||||
|
|
||||||
# 步骤3：将分离后的产物从柱子转移到目标容器
|
print(f"RUN_COLUMN: 生成了 {len(action_sequence)} 个动作")
|
||||||
action_sequence.append({
|
return action_sequence
|
||||||
"device_id": pump_id,
|
|
||||||
"action_name": "transfer",
|
|
||||||
"action_kwargs": {
|
# 便捷函数：常用柱层析方案
|
||||||
"from_vessel": column_id, # 从柱子设备转移
|
def generate_flash_column_protocol(
|
||||||
"to_vessel": to_vessel,
|
G: nx.DiGraph,
|
||||||
"volume": 0.0, # 转移所有液体，体积由系统确定
|
from_vessel: str,
|
||||||
"amount": f"收集分离产物 - 来自 {column}",
|
to_vessel: str,
|
||||||
"time": 0.0,
|
column_material: str = "silica_gel",
|
||||||
"viscous": False,
|
mobile_phase: str = "ethyl_acetate",
|
||||||
"rinsing_solvent": "",
|
mobile_phase_volume: float = 100.0
|
||||||
"rinsing_volume": 0.0,
|
) -> List[Dict[str, Any]]:
|
||||||
"rinsing_repeats": 0,
|
"""快速柱层析：高流速分离"""
|
||||||
"solid": False
|
return generate_run_column_protocol(
|
||||||
}
|
G, from_vessel, to_vessel, column_material,
|
||||||
})
|
mobile_phase, mobile_phase_volume, 1, "", 0.0, 3.0
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_preparative_column_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
column_material: str = "silica_gel",
|
||||||
|
equilibration_solvent: str = "hexane",
|
||||||
|
eluting_solvent: str = "ethyl_acetate",
|
||||||
|
eluting_volume: float = 50.0,
|
||||||
|
eluting_repeats: int = 3
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""制备柱层析：带平衡和多次洗脱"""
|
||||||
|
return generate_run_column_protocol(
|
||||||
|
G, from_vessel, to_vessel, column_material,
|
||||||
|
eluting_solvent, eluting_volume, eluting_repeats,
|
||||||
|
equilibration_solvent, 30.0, 1.5
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_gradient_column_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
column_material: str = "silica_gel",
|
||||||
|
gradient_solvents: List[str] = None,
|
||||||
|
gradient_volumes: List[float] = None
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""梯度洗脱柱层析：多种溶剂系统"""
|
||||||
|
if gradient_solvents is None:
|
||||||
|
gradient_solvents = ["hexane", "ethyl_acetate", "methanol"]
|
||||||
|
if gradient_volumes is None:
|
||||||
|
gradient_volumes = [50.0, 50.0, 30.0]
|
||||||
|
|
||||||
return action_sequence
|
action_sequence = []
|
||||||
|
|
||||||
|
# 每种溶剂单独执行一次柱层析
|
||||||
|
for i, (solvent, volume) in enumerate(zip(gradient_solvents, gradient_volumes)):
|
||||||
|
print(f"RUN_COLUMN: 梯度洗脱第 {i+1}/{len(gradient_solvents)} 步: {volume} mL {solvent}")
|
||||||
|
|
||||||
|
# 第一步使用源容器，后续步骤使用柱子作为源
|
||||||
|
step_from_vessel = from_vessel if i == 0 else column_material
|
||||||
|
# 最后一步使用目标容器，其他步骤使用柱子作为目标
|
||||||
|
step_to_vessel = to_vessel if i == len(gradient_solvents) - 1 else column_material
|
||||||
|
|
||||||
|
step_actions = generate_run_column_protocol(
|
||||||
|
G, step_from_vessel, step_to_vessel, column_material,
|
||||||
|
solvent, volume, 1, "", 0.0, 1.0
|
||||||
|
)
|
||||||
|
action_sequence.extend(step_actions)
|
||||||
|
|
||||||
|
# 在梯度步骤之间加入等待时间
|
||||||
|
if i < len(gradient_solvents) - 1:
|
||||||
|
action_sequence.append({
|
||||||
|
"action_name": "wait",
|
||||||
|
"action_kwargs": {"time": 20}
|
||||||
|
})
|
||||||
|
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
def generate_reverse_phase_column_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
column_material: str = "C18",
|
||||||
|
aqueous_phase: str = "water",
|
||||||
|
organic_phase: str = "methanol",
|
||||||
|
gradient_ratio: float = 0.5
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""反相柱层析：C18柱，水-有机相梯度"""
|
||||||
|
# 先用水相平衡
|
||||||
|
equilibration_volume = 20.0
|
||||||
|
# 然后用有机相洗脱
|
||||||
|
eluting_volume = 30.0 * gradient_ratio
|
||||||
|
|
||||||
|
return generate_run_column_protocol(
|
||||||
|
G, from_vessel, to_vessel, column_material,
|
||||||
|
organic_phase, eluting_volume, 2,
|
||||||
|
aqueous_phase, equilibration_volume, 0.8
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_ion_exchange_column_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
from_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
column_material: str = "ion_exchange",
|
||||||
|
buffer_solution: str = "buffer",
|
||||||
|
salt_solution: str = "NaCl_solution",
|
||||||
|
salt_volume: float = 40.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""离子交换柱层析：缓冲液平衡，盐溶液洗脱"""
|
||||||
|
return generate_run_column_protocol(
|
||||||
|
G, from_vessel, to_vessel, column_material,
|
||||||
|
salt_solution, salt_volume, 1,
|
||||||
|
buffer_solution, 25.0, 0.5
|
||||||
|
)
|
||||||
|
|
||||||
|
|
||||||
|
# 测试函数
|
||||||
|
def test_run_column_protocol():
|
||||||
|
"""测试柱层析协议的示例"""
|
||||||
|
print("=== RUN COLUMN PROTOCOL 测试 ===")
|
||||||
|
print("测试完成")
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
test_run_column_protocol()
|
||||||
@@ -1,6 +1,28 @@
|
|||||||
from typing import List, Dict, Any
|
from typing import List, Dict, Any
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
|
|
||||||
|
|
||||||
|
def find_connected_stirrer(G: nx.DiGraph, vessel: str = None) -> str:
|
||||||
|
"""
|
||||||
|
查找与指定容器相连的搅拌设备，或查找可用的搅拌设备
|
||||||
|
"""
|
||||||
|
# 查找所有搅拌设备节点
|
||||||
|
stirrer_nodes = [node for node in G.nodes()
|
||||||
|
if (G.nodes[node].get('class') or '') == 'virtual_stirrer']
|
||||||
|
|
||||||
|
if vessel:
|
||||||
|
# 检查哪个搅拌设备与目标容器相连（机械连接）
|
||||||
|
for stirrer in stirrer_nodes:
|
||||||
|
if G.has_edge(stirrer, vessel) or G.has_edge(vessel, stirrer):
|
||||||
|
return stirrer
|
||||||
|
|
||||||
|
# 如果没有指定容器或没有直接连接，返回第一个可用的搅拌设备
|
||||||
|
if stirrer_nodes:
|
||||||
|
return stirrer_nodes[0]
|
||||||
|
|
||||||
|
raise ValueError("系统中未找到可用的搅拌设备")
|
||||||
|
|
||||||
|
|
||||||
def generate_stir_protocol(
|
def generate_stir_protocol(
|
||||||
G: nx.DiGraph,
|
G: nx.DiGraph,
|
||||||
stir_time: float,
|
stir_time: float,
|
||||||
@@ -8,37 +30,24 @@ def generate_stir_protocol(
|
|||||||
settling_time: float
|
settling_time: float
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成搅拌操作的协议序列
|
生成搅拌操作的协议序列 - 定时搅拌 + 沉降
|
||||||
|
|
||||||
Args:
|
|
||||||
G: 有向图，节点为设备和容器
|
|
||||||
stir_time: 搅拌时间 (秒)
|
|
||||||
stir_speed: 搅拌速度 (rpm)
|
|
||||||
settling_time: 沉降时间 (秒)
|
|
||||||
|
|
||||||
Returns:
|
|
||||||
List[Dict[str, Any]]: 搅拌操作的动作序列
|
|
||||||
|
|
||||||
Raises:
|
|
||||||
ValueError: 当找不到搅拌设备时抛出异常
|
|
||||||
|
|
||||||
Examples:
|
|
||||||
stir_protocol = generate_stir_protocol(G, 300.0, 500.0, 60.0)
|
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
|
print(f"STIR: 开始生成搅拌协议")
|
||||||
|
print(f" - 搅拌时间: {stir_time}秒")
|
||||||
|
print(f" - 搅拌速度: {stir_speed} RPM")
|
||||||
|
print(f" - 沉降时间: {settling_time}秒")
|
||||||
|
|
||||||
# 查找搅拌设备
|
# 查找搅拌设备
|
||||||
stirrer_nodes = [node for node in G.nodes()
|
try:
|
||||||
if G.nodes[node].get('class') == 'virtual_stirrer']
|
stirrer_id = find_connected_stirrer(G)
|
||||||
|
print(f"STIR: 找到搅拌设备: {stirrer_id}")
|
||||||
if not stirrer_nodes:
|
except ValueError as e:
|
||||||
raise ValueError("没有找到可用的搅拌设备")
|
raise ValueError(f"无法找到搅拌设备: {str(e)}")
|
||||||
|
|
||||||
# 使用第一个可用的搅拌器
|
|
||||||
stirrer_id = stirrer_nodes[0]
|
|
||||||
|
|
||||||
# 执行搅拌操作
|
# 执行搅拌操作
|
||||||
action_sequence.append({
|
stir_action = {
|
||||||
"device_id": stirrer_id,
|
"device_id": stirrer_id,
|
||||||
"action_name": "stir",
|
"action_name": "stir",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
@@ -46,8 +55,11 @@ def generate_stir_protocol(
|
|||||||
"stir_speed": stir_speed,
|
"stir_speed": stir_speed,
|
||||||
"settling_time": settling_time
|
"settling_time": settling_time
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
|
||||||
|
action_sequence.append(stir_action)
|
||||||
|
|
||||||
|
print(f"STIR: 生成了 {len(action_sequence)} 个动作")
|
||||||
return action_sequence
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
@@ -58,33 +70,28 @@ def generate_start_stir_protocol(
|
|||||||
purpose: str
|
purpose: str
|
||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成开始搅拌操作的协议序列
|
生成开始搅拌操作的协议序列 - 持续搅拌
|
||||||
|
|
||||||
Args:
|
|
||||||
G: 有向图，节点为设备和容器
|
|
||||||
vessel: 搅拌容器
|
|
||||||
stir_speed: 搅拌速度 (rpm)
|
|
||||||
purpose: 搅拌目的
|
|
||||||
|
|
||||||
Returns:
|
|
||||||
List[Dict[str, Any]]: 开始搅拌操作的动作序列
|
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 查找搅拌设备
|
print(f"START_STIR: 开始生成启动搅拌协议")
|
||||||
stirrer_nodes = [node for node in G.nodes()
|
print(f" - 容器: {vessel}")
|
||||||
if G.nodes[node].get('class') == 'virtual_stirrer']
|
print(f" - 搅拌速度: {stir_speed} RPM")
|
||||||
|
print(f" - 目的: {purpose}")
|
||||||
|
|
||||||
if not stirrer_nodes:
|
# 验证容器存在
|
||||||
raise ValueError("没有找到可用的搅拌设备")
|
|
||||||
|
|
||||||
stirrer_id = stirrer_nodes[0]
|
|
||||||
|
|
||||||
# 验证容器是否存在
|
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
action_sequence.append({
|
# 查找搅拌设备
|
||||||
|
try:
|
||||||
|
stirrer_id = find_connected_stirrer(G, vessel)
|
||||||
|
print(f"START_STIR: 找到搅拌设备: {stirrer_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到搅拌设备: {str(e)}")
|
||||||
|
|
||||||
|
# 执行开始搅拌操作
|
||||||
|
start_stir_action = {
|
||||||
"device_id": stirrer_id,
|
"device_id": stirrer_id,
|
||||||
"action_name": "start_stir",
|
"action_name": "start_stir",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
@@ -92,8 +99,11 @@ def generate_start_stir_protocol(
|
|||||||
"stir_speed": stir_speed,
|
"stir_speed": stir_speed,
|
||||||
"purpose": purpose
|
"purpose": purpose
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
|
||||||
|
action_sequence.append(start_stir_action)
|
||||||
|
|
||||||
|
print(f"START_STIR: 生成了 {len(action_sequence)} 个动作")
|
||||||
return action_sequence
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
@@ -103,35 +113,54 @@ def generate_stop_stir_protocol(
|
|||||||
) -> List[Dict[str, Any]]:
|
) -> List[Dict[str, Any]]:
|
||||||
"""
|
"""
|
||||||
生成停止搅拌操作的协议序列
|
生成停止搅拌操作的协议序列
|
||||||
|
|
||||||
Args:
|
|
||||||
G: 有向图，节点为设备和容器
|
|
||||||
vessel: 搅拌容器
|
|
||||||
|
|
||||||
Returns:
|
|
||||||
List[Dict[str, Any]]: 停止搅拌操作的动作序列
|
|
||||||
"""
|
"""
|
||||||
action_sequence = []
|
action_sequence = []
|
||||||
|
|
||||||
# 查找搅拌设备
|
print(f"STOP_STIR: 开始生成停止搅拌协议")
|
||||||
stirrer_nodes = [node for node in G.nodes()
|
print(f" - 容器: {vessel}")
|
||||||
if G.nodes[node].get('class') == 'virtual_stirrer']
|
|
||||||
|
|
||||||
if not stirrer_nodes:
|
# 验证容器存在
|
||||||
raise ValueError("没有找到可用的搅拌设备")
|
|
||||||
|
|
||||||
stirrer_id = stirrer_nodes[0]
|
|
||||||
|
|
||||||
# 验证容器是否存在
|
|
||||||
if vessel not in G.nodes():
|
if vessel not in G.nodes():
|
||||||
raise ValueError(f"容器 {vessel} 不存在于图中")
|
raise ValueError(f"容器 '{vessel}' 不存在于系统中")
|
||||||
|
|
||||||
action_sequence.append({
|
# 查找搅拌设备
|
||||||
|
try:
|
||||||
|
stirrer_id = find_connected_stirrer(G, vessel)
|
||||||
|
print(f"STOP_STIR: 找到搅拌设备: {stirrer_id}")
|
||||||
|
except ValueError as e:
|
||||||
|
raise ValueError(f"无法找到搅拌设备: {str(e)}")
|
||||||
|
|
||||||
|
# 执行停止搅拌操作
|
||||||
|
stop_stir_action = {
|
||||||
"device_id": stirrer_id,
|
"device_id": stirrer_id,
|
||||||
"action_name": "stop_stir",
|
"action_name": "stop_stir",
|
||||||
"action_kwargs": {
|
"action_kwargs": {
|
||||||
"vessel": vessel
|
"vessel": vessel
|
||||||
}
|
}
|
||||||
})
|
}
|
||||||
|
|
||||||
return action_sequence
|
action_sequence.append(stop_stir_action)
|
||||||
|
|
||||||
|
print(f"STOP_STIR: 生成了 {len(action_sequence)} 个动作")
|
||||||
|
return action_sequence
|
||||||
|
|
||||||
|
|
||||||
|
# 便捷函数
|
||||||
|
def generate_fast_stir_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
time: float = 300.0,
|
||||||
|
speed: float = 800.0,
|
||||||
|
settling: float = 60.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""快速搅拌的便捷函数"""
|
||||||
|
return generate_stir_protocol(G, time, speed, settling)
|
||||||
|
|
||||||
|
|
||||||
|
def generate_gentle_stir_protocol(
|
||||||
|
G: nx.DiGraph,
|
||||||
|
time: float = 600.0,
|
||||||
|
speed: float = 200.0,
|
||||||
|
settling: float = 120.0
|
||||||
|
) -> List[Dict[str, Any]]:
|
||||||
|
"""温和搅拌的便捷函数"""
|
||||||
|
return generate_stir_protocol(G, time, speed, settling)
|
||||||
@@ -10,8 +10,9 @@ from unilabos.utils import logger
|
|||||||
class BasicConfig:
|
class BasicConfig:
|
||||||
ENV = "pro" # 'test'
|
ENV = "pro" # 'test'
|
||||||
config_path = ""
|
config_path = ""
|
||||||
is_host_mode = True # 从registry.py移动过来
|
is_host_mode = True
|
||||||
slave_no_host = False # 是否跳过rclient.wait_for_service()
|
slave_no_host = False # 是否跳过rclient.wait_for_service()
|
||||||
|
upload_registry = False
|
||||||
machine_name = "undefined"
|
machine_name = "undefined"
|
||||||
vis_2d_enable = False
|
vis_2d_enable = False
|
||||||
|
|
||||||
|
|||||||
@@ -1,158 +1,213 @@
|
|||||||
import asyncio
|
import asyncio
|
||||||
import logging
|
import logging
|
||||||
from typing import Dict, Any
|
import time as time_module
|
||||||
|
from typing import Dict, Any, Optional
|
||||||
|
|
||||||
|
|
||||||
class VirtualCentrifuge:
|
class VirtualCentrifuge:
|
||||||
"""Virtual centrifuge device for CentrifugeProtocol testing"""
|
"""Virtual centrifuge device - 简化版，只保留核心功能"""
|
||||||
|
|
||||||
def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
|
def __init__(self, device_id: Optional[str] = None, config: Optional[Dict[str, Any]] = None, **kwargs):
|
||||||
# 处理可能的不同调用方式
|
# 处理可能的不同调用方式
|
||||||
if device_id is None and 'id' in kwargs:
|
if device_id is None and "id" in kwargs:
|
||||||
device_id = kwargs.pop('id')
|
device_id = kwargs.pop("id")
|
||||||
if config is None and 'config' in kwargs:
|
if config is None and "config" in kwargs:
|
||||||
config = kwargs.pop('config')
|
config = kwargs.pop("config")
|
||||||
|
|
||||||
# 设置默认值
|
# 设置默认值
|
||||||
self.device_id = device_id or "unknown_centrifuge"
|
self.device_id = device_id or "unknown_centrifuge"
|
||||||
self.config = config or {}
|
self.config = config or {}
|
||||||
|
|
||||||
self.logger = logging.getLogger(f"VirtualCentrifuge.{self.device_id}")
|
self.logger = logging.getLogger(f"VirtualCentrifuge.{self.device_id}")
|
||||||
self.data = {}
|
self.data = {}
|
||||||
|
|
||||||
# 添加调试信息
|
|
||||||
print(f"=== VirtualCentrifuge {self.device_id} is being created! ===")
|
|
||||||
print(f"=== Config: {self.config} ===")
|
|
||||||
print(f"=== Kwargs: {kwargs} ===")
|
|
||||||
|
|
||||||
# 从config或kwargs中获取配置参数
|
# 从config或kwargs中获取配置参数
|
||||||
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
self.port = self.config.get("port") or kwargs.get("port", "VIRTUAL")
|
||||||
self._max_speed = self.config.get('max_speed') or kwargs.get('max_speed', 15000.0)
|
self._max_speed = self.config.get("max_speed") or kwargs.get("max_speed", 15000.0)
|
||||||
self._max_temp = self.config.get('max_temp') or kwargs.get('max_temp', 40.0)
|
self._max_temp = self.config.get("max_temp") or kwargs.get("max_temp", 40.0)
|
||||||
self._min_temp = self.config.get('min_temp') or kwargs.get('min_temp', 4.0)
|
self._min_temp = self.config.get("min_temp") or kwargs.get("min_temp", 4.0)
|
||||||
|
|
||||||
# 处理其他kwargs参数，但跳过已知的配置参数
|
# 处理其他kwargs参数
|
||||||
skip_keys = {'port', 'max_speed', 'max_temp', 'min_temp'}
|
skip_keys = {"port", "max_speed", "max_temp", "min_temp"}
|
||||||
for key, value in kwargs.items():
|
for key, value in kwargs.items():
|
||||||
if key not in skip_keys and not hasattr(self, key):
|
if key not in skip_keys and not hasattr(self, key):
|
||||||
setattr(self, key, value)
|
setattr(self, key, value)
|
||||||
|
|
||||||
async def initialize(self) -> bool:
|
async def initialize(self) -> bool:
|
||||||
"""Initialize virtual centrifuge"""
|
"""Initialize virtual centrifuge"""
|
||||||
print(f"=== VirtualCentrifuge {self.device_id} initialize() called! ===")
|
|
||||||
self.logger.info(f"Initializing virtual centrifuge {self.device_id}")
|
self.logger.info(f"Initializing virtual centrifuge {self.device_id}")
|
||||||
|
|
||||||
|
# 只保留核心状态
|
||||||
self.data.update({
|
self.data.update({
|
||||||
"status": "Idle",
|
"status": "Idle",
|
||||||
|
"centrifuge_state": "Stopped", # Stopped, Running, Completed, Error
|
||||||
"current_speed": 0.0,
|
"current_speed": 0.0,
|
||||||
"target_speed": 0.0,
|
"target_speed": 0.0,
|
||||||
"current_temp": 25.0,
|
"current_temp": 25.0,
|
||||||
"target_temp": 25.0,
|
"target_temp": 25.0,
|
||||||
"max_speed": self._max_speed,
|
|
||||||
"max_temp": self._max_temp,
|
|
||||||
"min_temp": self._min_temp,
|
|
||||||
"centrifuge_state": "Stopped",
|
|
||||||
"time_remaining": 0.0,
|
"time_remaining": 0.0,
|
||||||
"progress": 0.0,
|
"progress": 0.0,
|
||||||
"message": ""
|
"message": "Ready for centrifugation"
|
||||||
})
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def cleanup(self) -> bool:
|
async def cleanup(self) -> bool:
|
||||||
"""Cleanup virtual centrifuge"""
|
"""Cleanup virtual centrifuge"""
|
||||||
self.logger.info(f"Cleaning up virtual centrifuge {self.device_id}")
|
self.logger.info(f"Cleaning up virtual centrifuge {self.device_id}")
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": "Offline",
|
||||||
|
"centrifuge_state": "Offline",
|
||||||
|
"current_speed": 0.0,
|
||||||
|
"current_temp": 25.0,
|
||||||
|
"message": "System offline"
|
||||||
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def centrifuge(self, vessel: str, speed: float, time: float, temp: float = 25.0) -> bool:
|
async def centrifuge(
|
||||||
"""Execute centrifuge action - matches Centrifuge action"""
|
self,
|
||||||
self.logger.info(f"Centrifuge: vessel={vessel}, speed={speed} RPM, time={time}s, temp={temp}°C")
|
vessel: str,
|
||||||
|
speed: float,
|
||||||
|
time: float,
|
||||||
|
temp: float = 25.0
|
||||||
|
) -> bool:
|
||||||
|
"""Execute centrifuge action - 简化的离心流程"""
|
||||||
|
self.logger.info(f"Centrifuge: vessel={vessel}, speed={speed} rpm, time={time}s, temp={temp}°C")
|
||||||
|
|
||||||
# 验证参数
|
# 验证参数
|
||||||
if speed > self._max_speed:
|
if speed > self._max_speed or speed < 100.0:
|
||||||
self.logger.error(f"Speed {speed} exceeds maximum {self._max_speed}")
|
error_msg = f"离心速度 {speed} rpm 超出范围 (100-{self._max_speed} rpm)"
|
||||||
self.data["message"] = f"速度 {speed} 超过最大值 {self._max_speed}"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"centrifuge_state": "Error",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
if temp > self._max_temp or temp < self._min_temp:
|
if temp > self._max_temp or temp < self._min_temp:
|
||||||
self.logger.error(f"Temperature {temp} outside range {self._min_temp}-{self._max_temp}")
|
error_msg = f"温度 {temp}°C 超出范围 ({self._min_temp}-{self._max_temp}°C)"
|
||||||
self.data["message"] = f"温度 {temp} 超出范围 {self._min_temp}-{self._max_temp}"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"centrifuge_state": "Error",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
# 开始离心
|
# 开始离心
|
||||||
self.data.update({
|
self.data.update({
|
||||||
"status": "Running",
|
"status": f"离心中: {vessel}",
|
||||||
"centrifuge_state": "Centrifuging",
|
"centrifuge_state": "Running",
|
||||||
"target_speed": speed,
|
|
||||||
"current_speed": speed,
|
"current_speed": speed,
|
||||||
"target_temp": temp,
|
"target_speed": speed,
|
||||||
"current_temp": temp,
|
"current_temp": temp,
|
||||||
|
"target_temp": temp,
|
||||||
"time_remaining": time,
|
"time_remaining": time,
|
||||||
"vessel": vessel,
|
|
||||||
"progress": 0.0,
|
"progress": 0.0,
|
||||||
"message": f"离心中: {vessel} at {speed} RPM"
|
"message": f"Centrifuging {vessel} at {speed} rpm, {temp}°C"
|
||||||
})
|
})
|
||||||
|
|
||||||
# 模拟离心过程
|
try:
|
||||||
simulation_time = min(time, 5.0) # 最多等待5秒用于测试
|
# 离心过程 - 实时更新进度
|
||||||
await asyncio.sleep(simulation_time)
|
start_time = time_module.time()
|
||||||
|
total_time = time
|
||||||
# 离心完成
|
|
||||||
self.data.update({
|
while True:
|
||||||
"status": "Idle",
|
current_time = time_module.time()
|
||||||
"centrifuge_state": "Stopped",
|
elapsed = current_time - start_time
|
||||||
"current_speed": 0.0,
|
remaining = max(0, total_time - elapsed)
|
||||||
"target_speed": 0.0,
|
progress = min(100.0, (elapsed / total_time) * 100)
|
||||||
"time_remaining": 0.0,
|
|
||||||
"progress": 100.0,
|
# 更新状态
|
||||||
"message": f"离心完成: {vessel}"
|
self.data.update({
|
||||||
})
|
"time_remaining": remaining,
|
||||||
|
"progress": progress,
|
||||||
self.logger.info(f"Centrifuge completed for vessel {vessel}")
|
"status": f"离心中: {vessel} | {speed} rpm | {temp}°C | {progress:.1f}% | 剩余: {remaining:.0f}s",
|
||||||
return True
|
"message": f"Centrifuging: {progress:.1f}% complete, {remaining:.0f}s remaining"
|
||||||
|
})
|
||||||
# 状态属性
|
|
||||||
|
# 时间到了，退出循环
|
||||||
|
if remaining <= 0:
|
||||||
|
break
|
||||||
|
|
||||||
|
# 每秒更新一次
|
||||||
|
await asyncio.sleep(1.0)
|
||||||
|
|
||||||
|
# 离心完成
|
||||||
|
self.data.update({
|
||||||
|
"status": f"离心完成: {vessel} | {speed} rpm | {time}s",
|
||||||
|
"centrifuge_state": "Completed",
|
||||||
|
"progress": 100.0,
|
||||||
|
"time_remaining": 0.0,
|
||||||
|
"current_speed": 0.0, # 停止旋转
|
||||||
|
"current_temp": 25.0, # 恢复室温
|
||||||
|
"message": f"Centrifugation completed: {vessel} at {speed} rpm for {time}s"
|
||||||
|
})
|
||||||
|
|
||||||
|
self.logger.info(f"Centrifugation completed: {vessel} at {speed} rpm for {time}s")
|
||||||
|
return True
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
# 出错处理
|
||||||
|
self.logger.error(f"Error during centrifugation: {str(e)}")
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": f"离心错误: {str(e)}",
|
||||||
|
"centrifuge_state": "Error",
|
||||||
|
"current_speed": 0.0,
|
||||||
|
"current_temp": 25.0,
|
||||||
|
"progress": 0.0,
|
||||||
|
"time_remaining": 0.0,
|
||||||
|
"message": f"Centrifugation failed: {str(e)}"
|
||||||
|
})
|
||||||
|
return False
|
||||||
|
|
||||||
|
# === 核心状态属性 ===
|
||||||
@property
|
@property
|
||||||
def status(self) -> str:
|
def status(self) -> str:
|
||||||
return self.data.get("status", "Unknown")
|
return self.data.get("status", "Unknown")
|
||||||
|
|
||||||
@property
|
|
||||||
def current_speed(self) -> float:
|
|
||||||
return self.data.get("current_speed", 0.0)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def target_speed(self) -> float:
|
|
||||||
return self.data.get("target_speed", 0.0)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def current_temp(self) -> float:
|
|
||||||
return self.data.get("current_temp", 25.0)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def target_temp(self) -> float:
|
|
||||||
return self.data.get("target_temp", 25.0)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def max_speed(self) -> float:
|
|
||||||
return self.data.get("max_speed", self._max_speed)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def max_temp(self) -> float:
|
|
||||||
return self.data.get("max_temp", self._max_temp)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def min_temp(self) -> float:
|
|
||||||
return self.data.get("min_temp", self._min_temp)
|
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def centrifuge_state(self) -> str:
|
def centrifuge_state(self) -> str:
|
||||||
return self.data.get("centrifuge_state", "Unknown")
|
return self.data.get("centrifuge_state", "Unknown")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_speed(self) -> float:
|
||||||
|
return self.data.get("current_speed", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def target_speed(self) -> float:
|
||||||
|
return self.data.get("target_speed", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_temp(self) -> float:
|
||||||
|
return self.data.get("current_temp", 25.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def target_temp(self) -> float:
|
||||||
|
return self.data.get("target_temp", 25.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def max_speed(self) -> float:
|
||||||
|
return self._max_speed
|
||||||
|
|
||||||
|
@property
|
||||||
|
def max_temp(self) -> float:
|
||||||
|
return self._max_temp
|
||||||
|
|
||||||
|
@property
|
||||||
|
def min_temp(self) -> float:
|
||||||
|
return self._min_temp
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def time_remaining(self) -> float:
|
def time_remaining(self) -> float:
|
||||||
return self.data.get("time_remaining", 0.0)
|
return self.data.get("time_remaining", 0.0)
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def progress(self) -> float:
|
def progress(self) -> float:
|
||||||
return self.data.get("progress", 0.0)
|
return self.data.get("progress", 0.0)
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def message(self) -> str:
|
def message(self) -> str:
|
||||||
return self.data.get("message", "")
|
return self.data.get("message", "")
|
||||||
@@ -1,151 +1,221 @@
|
|||||||
import asyncio
|
import asyncio
|
||||||
import logging
|
import logging
|
||||||
from typing import Dict, Any
|
import time as time_module
|
||||||
|
from typing import Dict, Any, Optional
|
||||||
|
|
||||||
|
|
||||||
class VirtualFilter:
|
class VirtualFilter:
|
||||||
"""Virtual filter device for FilterProtocol testing"""
|
"""Virtual filter device - 完全按照 Filter.action 规范"""
|
||||||
|
|
||||||
def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
|
def __init__(self, device_id: Optional[str] = None, config: Optional[Dict[str, Any]] = None, **kwargs):
|
||||||
# 处理可能的不同调用方式
|
|
||||||
if device_id is None and 'id' in kwargs:
|
if device_id is None and 'id' in kwargs:
|
||||||
device_id = kwargs.pop('id')
|
device_id = kwargs.pop('id')
|
||||||
if config is None and 'config' in kwargs:
|
if config is None and 'config' in kwargs:
|
||||||
config = kwargs.pop('config')
|
config = kwargs.pop('config')
|
||||||
|
|
||||||
# 设置默认值
|
|
||||||
self.device_id = device_id or "unknown_filter"
|
self.device_id = device_id or "unknown_filter"
|
||||||
self.config = config or {}
|
self.config = config or {}
|
||||||
|
|
||||||
self.logger = logging.getLogger(f"VirtualFilter.{self.device_id}")
|
self.logger = logging.getLogger(f"VirtualFilter.{self.device_id}")
|
||||||
self.data = {}
|
self.data = {}
|
||||||
|
|
||||||
# 添加调试信息
|
|
||||||
print(f"=== VirtualFilter {self.device_id} is being created! ===")
|
|
||||||
print(f"=== Config: {self.config} ===")
|
|
||||||
print(f"=== Kwargs: {kwargs} ===")
|
|
||||||
|
|
||||||
# 从config或kwargs中获取配置参数
|
# 从config或kwargs中获取配置参数
|
||||||
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
||||||
self._max_temp = self.config.get('max_temp') or kwargs.get('max_temp', 100.0)
|
self._max_temp = self.config.get('max_temp') or kwargs.get('max_temp', 100.0)
|
||||||
self._max_stir_speed = self.config.get('max_stir_speed') or kwargs.get('max_stir_speed', 1000.0)
|
self._max_stir_speed = self.config.get('max_stir_speed') or kwargs.get('max_stir_speed', 1000.0)
|
||||||
|
self._max_volume = self.config.get('max_volume') or kwargs.get('max_volume', 500.0)
|
||||||
|
|
||||||
# 处理其他kwargs参数，但跳过已知的配置参数
|
# 处理其他kwargs参数
|
||||||
skip_keys = {'port', 'max_temp', 'max_stir_speed'}
|
skip_keys = {'port', 'max_temp', 'max_stir_speed', 'max_volume'}
|
||||||
for key, value in kwargs.items():
|
for key, value in kwargs.items():
|
||||||
if key not in skip_keys and not hasattr(self, key):
|
if key not in skip_keys and not hasattr(self, key):
|
||||||
setattr(self, key, value)
|
setattr(self, key, value)
|
||||||
|
|
||||||
async def initialize(self) -> bool:
|
async def initialize(self) -> bool:
|
||||||
"""Initialize virtual filter"""
|
"""Initialize virtual filter"""
|
||||||
print(f"=== VirtualFilter {self.device_id} initialize() called! ===")
|
|
||||||
self.logger.info(f"Initializing virtual filter {self.device_id}")
|
self.logger.info(f"Initializing virtual filter {self.device_id}")
|
||||||
|
|
||||||
|
# 按照 Filter.action 的 feedback 字段初始化
|
||||||
self.data.update({
|
self.data.update({
|
||||||
"status": "Idle",
|
"status": "Idle",
|
||||||
"filter_state": "Ready",
|
"progress": 0.0, # Filter.action feedback
|
||||||
"current_temp": 25.0,
|
"current_temp": 25.0, # Filter.action feedback
|
||||||
"target_temp": 25.0,
|
"filtered_volume": 0.0, # Filter.action feedback
|
||||||
"max_temp": self._max_temp,
|
"current_status": "Ready for filtration", # Filter.action feedback
|
||||||
"stir_speed": 0.0,
|
"message": "Ready for filtration"
|
||||||
"max_stir_speed": self._max_stir_speed,
|
|
||||||
"filtered_volume": 0.0,
|
|
||||||
"progress": 0.0,
|
|
||||||
"message": ""
|
|
||||||
})
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def cleanup(self) -> bool:
|
async def cleanup(self) -> bool:
|
||||||
"""Cleanup virtual filter"""
|
"""Cleanup virtual filter"""
|
||||||
self.logger.info(f"Cleaning up virtual filter {self.device_id}")
|
self.logger.info(f"Cleaning up virtual filter {self.device_id}")
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": "Offline",
|
||||||
|
"current_status": "System offline",
|
||||||
|
"message": "System offline"
|
||||||
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def filter_sample(self, vessel: str, filtrate_vessel: str = "", stir: bool = False,
|
async def filter(
|
||||||
stir_speed: float = 300.0, temp: float = 25.0,
|
self,
|
||||||
continue_heatchill: bool = False, volume: float = 0.0) -> bool:
|
vessel: str,
|
||||||
"""Execute filter action - matches Filter action"""
|
filtrate_vessel: str = "",
|
||||||
self.logger.info(f"Filter: vessel={vessel}, filtrate_vessel={filtrate_vessel}, stir={stir}, volume={volume}")
|
stir: bool = False,
|
||||||
|
stir_speed: float = 300.0,
|
||||||
|
temp: float = 25.0,
|
||||||
|
continue_heatchill: bool = False,
|
||||||
|
volume: float = 0.0
|
||||||
|
) -> bool:
|
||||||
|
"""Execute filter action - 完全按照 Filter.action 参数"""
|
||||||
|
self.logger.info(f"Filter: vessel={vessel}, filtrate_vessel={filtrate_vessel}")
|
||||||
|
self.logger.info(f" stir={stir}, stir_speed={stir_speed}, temp={temp}")
|
||||||
|
self.logger.info(f" continue_heatchill={continue_heatchill}, volume={volume}")
|
||||||
|
|
||||||
# 验证参数
|
# 验证参数
|
||||||
if temp > self._max_temp:
|
if temp > self._max_temp or temp < 4.0:
|
||||||
self.logger.error(f"Temperature {temp} exceeds maximum {self._max_temp}")
|
error_msg = f"温度 {temp}°C 超出范围 (4-{self._max_temp}°C)"
|
||||||
self.data["message"] = f"温度 {temp} 超过最大值 {self._max_temp}"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"current_status": f"Error: {error_msg}",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
if stir and stir_speed > self._max_stir_speed:
|
if stir and stir_speed > self._max_stir_speed:
|
||||||
self.logger.error(f"Stir speed {stir_speed} exceeds maximum {self._max_stir_speed}")
|
error_msg = f"搅拌速度 {stir_speed} RPM 超出范围 (0-{self._max_stir_speed} RPM)"
|
||||||
self.data["message"] = f"搅拌速度 {stir_speed} 超过最大值 {self._max_stir_speed}"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"current_status": f"Error: {error_msg}",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
|
return False
|
||||||
|
|
||||||
|
if volume > self._max_volume:
|
||||||
|
error_msg = f"过滤体积 {volume} mL 超出范围 (0-{self._max_volume} mL)"
|
||||||
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"current_status": f"Error: {error_msg}",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
# 开始过滤
|
# 开始过滤
|
||||||
|
filter_volume = volume if volume > 0 else 50.0
|
||||||
|
|
||||||
self.data.update({
|
self.data.update({
|
||||||
"status": "Running",
|
"status": f"过滤中: {vessel}",
|
||||||
"filter_state": "Filtering",
|
|
||||||
"target_temp": temp,
|
|
||||||
"current_temp": temp,
|
"current_temp": temp,
|
||||||
"stir_speed": stir_speed if stir else 0.0,
|
"filtered_volume": 0.0,
|
||||||
"vessel": vessel,
|
|
||||||
"filtrate_vessel": filtrate_vessel,
|
|
||||||
"target_volume": volume,
|
|
||||||
"progress": 0.0,
|
"progress": 0.0,
|
||||||
"message": f"过滤中: {vessel}"
|
"current_status": f"Filtering {vessel} → {filtrate_vessel}",
|
||||||
|
"message": f"Starting filtration: {vessel} → {filtrate_vessel}"
|
||||||
})
|
})
|
||||||
|
|
||||||
# 模拟过滤过程
|
try:
|
||||||
simulation_time = min(volume / 10.0 if volume > 0 else 5.0, 10.0)
|
# 过滤过程 - 实时更新进度
|
||||||
await asyncio.sleep(simulation_time)
|
start_time = time_module.time()
|
||||||
|
# 根据体积和搅拌估算过滤时间
|
||||||
# 过滤完成
|
base_time = filter_volume / 5.0 # 5mL/s 基础速度
|
||||||
filtered_vol = volume if volume > 0 else 50.0 # 默认过滤量
|
if stir:
|
||||||
self.data.update({
|
base_time *= 0.8 # 搅拌加速过滤
|
||||||
"status": "Idle",
|
if temp > 50.0:
|
||||||
"filter_state": "Ready",
|
base_time *= 0.7 # 高温加速过滤
|
||||||
"current_temp": 25.0 if not continue_heatchill else temp,
|
filter_time = max(base_time, 10.0) # 最少10秒
|
||||||
"target_temp": 25.0 if not continue_heatchill else temp,
|
|
||||||
"stir_speed": 0.0 if not stir else stir_speed,
|
while True:
|
||||||
"filtered_volume": filtered_vol,
|
current_time = time_module.time()
|
||||||
"progress": 100.0,
|
elapsed = current_time - start_time
|
||||||
"message": f"过滤完成: {filtered_vol}mL"
|
remaining = max(0, filter_time - elapsed)
|
||||||
})
|
progress = min(100.0, (elapsed / filter_time) * 100)
|
||||||
|
current_filtered = (progress / 100.0) * filter_volume
|
||||||
self.logger.info(f"Filter completed: {filtered_vol}mL from {vessel}")
|
|
||||||
return True
|
# 更新状态 - 按照 Filter.action feedback 字段
|
||||||
|
status_msg = f"过滤中: {vessel}"
|
||||||
|
if stir:
|
||||||
|
status_msg += f" | 搅拌: {stir_speed} RPM"
|
||||||
|
status_msg += f" | {temp}°C | {progress:.1f}% | 已过滤: {current_filtered:.1f}mL"
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"progress": progress, # Filter.action feedback
|
||||||
|
"current_temp": temp, # Filter.action feedback
|
||||||
|
"filtered_volume": current_filtered, # Filter.action feedback
|
||||||
|
"current_status": f"Filtering: {progress:.1f}% complete", # Filter.action feedback
|
||||||
|
"status": status_msg,
|
||||||
|
"message": f"Filtering: {progress:.1f}% complete, {current_filtered:.1f}mL filtered"
|
||||||
|
})
|
||||||
|
|
||||||
|
if remaining <= 0:
|
||||||
|
break
|
||||||
|
|
||||||
|
await asyncio.sleep(1.0)
|
||||||
|
|
||||||
|
# 过滤完成
|
||||||
|
final_temp = temp if continue_heatchill else 25.0
|
||||||
|
final_status = f"过滤完成: {vessel} | {filter_volume}mL → {filtrate_vessel}"
|
||||||
|
if continue_heatchill:
|
||||||
|
final_status += " | 继续加热搅拌"
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": final_status,
|
||||||
|
"progress": 100.0, # Filter.action feedback
|
||||||
|
"current_temp": final_temp, # Filter.action feedback
|
||||||
|
"filtered_volume": filter_volume, # Filter.action feedback
|
||||||
|
"current_status": f"Filtration completed: {filter_volume}mL", # Filter.action feedback
|
||||||
|
"message": f"Filtration completed: {filter_volume}mL filtered from {vessel}"
|
||||||
|
})
|
||||||
|
|
||||||
|
self.logger.info(f"Filtration completed: {filter_volume}mL from {vessel} to {filtrate_vessel}")
|
||||||
|
return True
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
self.logger.error(f"Error during filtration: {str(e)}")
|
||||||
|
self.data.update({
|
||||||
|
"status": f"过滤错误: {str(e)}",
|
||||||
|
"current_status": f"Filtration failed: {str(e)}",
|
||||||
|
"message": f"Filtration failed: {str(e)}"
|
||||||
|
})
|
||||||
|
return False
|
||||||
|
|
||||||
# 状态属性
|
# === 核心状态属性 - 按照 Filter.action feedback 字段 ===
|
||||||
@property
|
@property
|
||||||
def status(self) -> str:
|
def status(self) -> str:
|
||||||
return self.data.get("status", "Unknown")
|
return self.data.get("status", "Unknown")
|
||||||
|
|
||||||
@property
|
|
||||||
def filter_state(self) -> str:
|
|
||||||
return self.data.get("filter_state", "Unknown")
|
|
||||||
|
|
||||||
@property
|
|
||||||
def current_temp(self) -> float:
|
|
||||||
return self.data.get("current_temp", 25.0)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def target_temp(self) -> float:
|
|
||||||
return self.data.get("target_temp", 25.0)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def max_temp(self) -> float:
|
|
||||||
return self.data.get("max_temp", self._max_temp)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def stir_speed(self) -> float:
|
|
||||||
return self.data.get("stir_speed", 0.0)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def max_stir_speed(self) -> float:
|
|
||||||
return self.data.get("max_stir_speed", self._max_stir_speed)
|
|
||||||
|
|
||||||
@property
|
|
||||||
def filtered_volume(self) -> float:
|
|
||||||
return self.data.get("filtered_volume", 0.0)
|
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def progress(self) -> float:
|
def progress(self) -> float:
|
||||||
|
"""Filter.action feedback 字段"""
|
||||||
return self.data.get("progress", 0.0)
|
return self.data.get("progress", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_temp(self) -> float:
|
||||||
|
"""Filter.action feedback 字段"""
|
||||||
|
return self.data.get("current_temp", 25.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def filtered_volume(self) -> float:
|
||||||
|
"""Filter.action feedback 字段"""
|
||||||
|
return self.data.get("filtered_volume", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_status(self) -> str:
|
||||||
|
"""Filter.action feedback 字段"""
|
||||||
|
return self.data.get("current_status", "")
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def message(self) -> str:
|
def message(self) -> str:
|
||||||
return self.data.get("message", "")
|
return self.data.get("message", "")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def max_temp(self) -> float:
|
||||||
|
return self._max_temp
|
||||||
|
|
||||||
|
@property
|
||||||
|
def max_stir_speed(self) -> float:
|
||||||
|
return self._max_stir_speed
|
||||||
|
|
||||||
|
@property
|
||||||
|
def max_volume(self) -> float:
|
||||||
|
return self._max_volume
|
||||||
46
unilabos/devices/virtual/virtual_gas_source.py
Normal file
46
unilabos/devices/virtual/virtual_gas_source.py
Normal file
@@ -0,0 +1,46 @@
|
|||||||
|
import time
|
||||||
|
from typing import Dict, Any, Optional
|
||||||
|
|
||||||
|
|
||||||
|
class VirtualGasSource:
|
||||||
|
"""Virtual gas source for testing"""
|
||||||
|
|
||||||
|
def __init__(self, device_id: Optional[str] = None, config: Optional[Dict[str, Any]] = None, **kwargs):
|
||||||
|
self.device_id = device_id or "unknown_gas_source"
|
||||||
|
self.config = config or {}
|
||||||
|
self.data = {}
|
||||||
|
self._status = "OPEN"
|
||||||
|
|
||||||
|
async def initialize(self) -> bool:
|
||||||
|
"""Initialize virtual gas source"""
|
||||||
|
self.data.update({
|
||||||
|
"status": self._status
|
||||||
|
})
|
||||||
|
return True
|
||||||
|
|
||||||
|
async def cleanup(self) -> bool:
|
||||||
|
"""Cleanup virtual gas source"""
|
||||||
|
return True
|
||||||
|
|
||||||
|
@property
|
||||||
|
def status(self) -> str:
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
def get_status(self) -> str:
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
def set_status(self, string):
|
||||||
|
self._status = string
|
||||||
|
time.sleep(5)
|
||||||
|
|
||||||
|
def open(self):
|
||||||
|
self._status = "OPEN"
|
||||||
|
|
||||||
|
def close(self):
|
||||||
|
self._status = "CLOSED"
|
||||||
|
|
||||||
|
def is_open(self):
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
def is_closed(self):
|
||||||
|
return not self._status
|
||||||
@@ -1,5 +1,6 @@
|
|||||||
import asyncio
|
import asyncio
|
||||||
import logging
|
import logging
|
||||||
|
import time as time_module # 重命名time模块，避免与参数冲突
|
||||||
from typing import Dict, Any
|
from typing import Dict, Any
|
||||||
|
|
||||||
class VirtualHeatChill:
|
class VirtualHeatChill:
|
||||||
@@ -19,18 +20,13 @@ class VirtualHeatChill:
|
|||||||
self.logger = logging.getLogger(f"VirtualHeatChill.{self.device_id}")
|
self.logger = logging.getLogger(f"VirtualHeatChill.{self.device_id}")
|
||||||
self.data = {}
|
self.data = {}
|
||||||
|
|
||||||
# 添加调试信息
|
|
||||||
print(f"=== VirtualHeatChill {self.device_id} is being created! ===")
|
|
||||||
print(f"=== Config: {self.config} ===")
|
|
||||||
print(f"=== Kwargs: {kwargs} ===")
|
|
||||||
|
|
||||||
# 从config或kwargs中获取配置参数
|
# 从config或kwargs中获取配置参数
|
||||||
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
||||||
self._max_temp = self.config.get('max_temp') or kwargs.get('max_temp', 200.0)
|
self._max_temp = self.config.get('max_temp') or kwargs.get('max_temp', 200.0)
|
||||||
self._min_temp = self.config.get('min_temp') or kwargs.get('min_temp', -80.0)
|
self._min_temp = self.config.get('min_temp') or kwargs.get('min_temp', -80.0)
|
||||||
self._max_stir_speed = self.config.get('max_stir_speed') or kwargs.get('max_stir_speed', 1000.0)
|
self._max_stir_speed = self.config.get('max_stir_speed') or kwargs.get('max_stir_speed', 1000.0)
|
||||||
|
|
||||||
# 处理其他kwargs参数，但跳过已知的配置参数
|
# 处理其他kwargs参数
|
||||||
skip_keys = {'port', 'max_temp', 'min_temp', 'max_stir_speed'}
|
skip_keys = {'port', 'max_temp', 'min_temp', 'max_stir_speed'}
|
||||||
for key, value in kwargs.items():
|
for key, value in kwargs.items():
|
||||||
if key not in skip_keys and not hasattr(self, key):
|
if key not in skip_keys and not hasattr(self, key):
|
||||||
@@ -38,70 +34,177 @@ class VirtualHeatChill:
|
|||||||
|
|
||||||
async def initialize(self) -> bool:
|
async def initialize(self) -> bool:
|
||||||
"""Initialize virtual heat chill"""
|
"""Initialize virtual heat chill"""
|
||||||
print(f"=== VirtualHeatChill {self.device_id} initialize() called! ===")
|
|
||||||
self.logger.info(f"Initializing virtual heat chill {self.device_id}")
|
self.logger.info(f"Initializing virtual heat chill {self.device_id}")
|
||||||
|
|
||||||
|
# 初始化状态信息
|
||||||
self.data.update({
|
self.data.update({
|
||||||
"status": "Idle"
|
"status": "Idle",
|
||||||
|
"operation_mode": "Idle",
|
||||||
|
"is_stirring": False,
|
||||||
|
"stir_speed": 0.0,
|
||||||
|
"remaining_time": 0.0,
|
||||||
})
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def cleanup(self) -> bool:
|
async def cleanup(self) -> bool:
|
||||||
"""Cleanup virtual heat chill"""
|
"""Cleanup virtual heat chill"""
|
||||||
self.logger.info(f"Cleaning up virtual heat chill {self.device_id}")
|
self.logger.info(f"Cleaning up virtual heat chill {self.device_id}")
|
||||||
|
self.data.update({
|
||||||
|
"status": "Offline",
|
||||||
|
"operation_mode": "Offline",
|
||||||
|
"is_stirring": False,
|
||||||
|
"stir_speed": 0.0,
|
||||||
|
"remaining_time": 0.0
|
||||||
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def heat_chill(self, vessel: str, temp: float, time: float, stir: bool,
|
async def heat_chill(self, vessel: str, temp: float, time: float, stir: bool,
|
||||||
stir_speed: float, purpose: str) -> bool:
|
stir_speed: float, purpose: str) -> bool:
|
||||||
"""Execute heat chill action - matches HeatChill action exactly"""
|
"""Execute heat chill action - 按实际时间运行，实时更新剩余时间"""
|
||||||
self.logger.info(f"HeatChill: vessel={vessel}, temp={temp}°C, time={time}s, stir={stir}, stir_speed={stir_speed}, purpose={purpose}")
|
self.logger.info(f"HeatChill: vessel={vessel}, temp={temp}°C, time={time}s, stir={stir}, stir_speed={stir_speed}")
|
||||||
|
|
||||||
# 验证参数
|
# 验证参数
|
||||||
if temp > self._max_temp or temp < self._min_temp:
|
if temp > self._max_temp or temp < self._min_temp:
|
||||||
self.logger.error(f"Temperature {temp} outside range {self._min_temp}-{self._max_temp}")
|
error_msg = f"温度 {temp}°C 超出范围 ({self._min_temp}°C - {self._max_temp}°C)"
|
||||||
self.data["status"] = f"温度 {temp} 超出范围"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"operation_mode": "Error"
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
if stir and stir_speed > self._max_stir_speed:
|
if stir and stir_speed > self._max_stir_speed:
|
||||||
self.logger.error(f"Stir speed {stir_speed} exceeds maximum {self._max_stir_speed}")
|
error_msg = f"搅拌速度 {stir_speed} RPM 超出最大值 {self._max_stir_speed} RPM"
|
||||||
self.data["status"] = f"搅拌速度 {stir_speed} 超出范围"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"operation_mode": "Error"
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
# 开始加热/冷却
|
# 确定操作模式
|
||||||
|
if temp > 25.0:
|
||||||
|
operation_mode = "Heating"
|
||||||
|
status_action = "加热"
|
||||||
|
elif temp < 25.0:
|
||||||
|
operation_mode = "Cooling"
|
||||||
|
status_action = "冷却"
|
||||||
|
else:
|
||||||
|
operation_mode = "Maintaining"
|
||||||
|
status_action = "保温"
|
||||||
|
|
||||||
|
# **修复**: 使用重命名的time模块
|
||||||
|
start_time = time_module.time()
|
||||||
|
total_time = time
|
||||||
|
|
||||||
|
# 开始操作
|
||||||
|
stir_info = f" | 搅拌: {stir_speed} RPM" if stir else ""
|
||||||
self.data.update({
|
self.data.update({
|
||||||
"status": f"加热/冷却中: {vessel} 至 {temp}°C"
|
"status": f"运行中: {status_action} {vessel} 至 {temp}°C | 剩余: {total_time:.0f}s{stir_info}",
|
||||||
|
"operation_mode": operation_mode,
|
||||||
|
"is_stirring": stir,
|
||||||
|
"stir_speed": stir_speed if stir else 0.0,
|
||||||
|
"remaining_time": total_time,
|
||||||
})
|
})
|
||||||
|
|
||||||
# 模拟加热/冷却时间
|
# **修复**: 在等待过程中每秒更新剩余时间
|
||||||
simulation_time = min(time, 10.0) # 最多等待10秒用于测试
|
while True:
|
||||||
await asyncio.sleep(simulation_time)
|
current_time = time_module.time() # 使用重命名的time模块
|
||||||
|
elapsed = current_time - start_time
|
||||||
|
remaining = max(0, total_time - elapsed)
|
||||||
|
|
||||||
|
# 更新剩余时间和状态
|
||||||
|
self.data.update({
|
||||||
|
"remaining_time": remaining,
|
||||||
|
"status": f"运行中: {status_action} {vessel} 至 {temp}°C | 剩余: {remaining:.0f}s{stir_info}"
|
||||||
|
})
|
||||||
|
|
||||||
|
# 如果时间到了，退出循环
|
||||||
|
if remaining <= 0:
|
||||||
|
break
|
||||||
|
|
||||||
|
# 等待1秒后再次检查
|
||||||
|
await asyncio.sleep(1.0)
|
||||||
|
|
||||||
# 加热/冷却完成
|
# 操作完成
|
||||||
self.data["status"] = f"完成: {vessel} 已达到 {temp}°C"
|
final_stir_info = f" | 搅拌: {stir_speed} RPM" if stir else ""
|
||||||
|
self.data.update({
|
||||||
|
"status": f"完成: {vessel} 已达到 {temp}°C | 用时: {total_time:.0f}s{final_stir_info}",
|
||||||
|
"operation_mode": "Completed",
|
||||||
|
"remaining_time": 0.0,
|
||||||
|
"is_stirring": False,
|
||||||
|
"stir_speed": 0.0
|
||||||
|
})
|
||||||
|
|
||||||
self.logger.info(f"HeatChill completed for vessel {vessel} at {temp}°C")
|
self.logger.info(f"HeatChill completed for vessel {vessel} at {temp}°C after {total_time}s")
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def heat_chill_start(self, vessel: str, temp: float, purpose: str) -> bool:
|
async def heat_chill_start(self, vessel: str, temp: float, purpose: str) -> bool:
|
||||||
"""Start heat chill - matches HeatChillStart action exactly"""
|
"""Start continuous heat chill"""
|
||||||
self.logger.info(f"HeatChillStart: vessel={vessel}, temp={temp}°C, purpose={purpose}")
|
self.logger.info(f"HeatChillStart: vessel={vessel}, temp={temp}°C")
|
||||||
|
|
||||||
# 验证参数
|
# 验证参数
|
||||||
if temp > self._max_temp or temp < self._min_temp:
|
if temp > self._max_temp or temp < self._min_temp:
|
||||||
self.logger.error(f"Temperature {temp} outside range {self._min_temp}-{self._max_temp}")
|
error_msg = f"温度 {temp}°C 超出范围 ({self._min_temp}°C - {self._max_temp}°C)"
|
||||||
self.data["status"] = f"温度 {temp} 超出范围"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"operation_mode": "Error"
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
self.data["status"] = f"开始加热/冷却: {vessel} 至 {temp}°C"
|
# 确定操作模式
|
||||||
|
if temp > 25.0:
|
||||||
|
operation_mode = "Heating"
|
||||||
|
status_action = "持续加热"
|
||||||
|
elif temp < 25.0:
|
||||||
|
operation_mode = "Cooling"
|
||||||
|
status_action = "持续冷却"
|
||||||
|
else:
|
||||||
|
operation_mode = "Maintaining"
|
||||||
|
status_action = "恒温保持"
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": f"启动: {status_action} {vessel} 至 {temp}°C | 持续运行",
|
||||||
|
"operation_mode": operation_mode,
|
||||||
|
"is_stirring": False,
|
||||||
|
"stir_speed": 0.0,
|
||||||
|
"remaining_time": -1.0, # -1 表示持续运行
|
||||||
|
})
|
||||||
|
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def heat_chill_stop(self, vessel: str) -> bool:
|
async def heat_chill_stop(self, vessel: str) -> bool:
|
||||||
"""Stop heat chill - matches HeatChillStop action exactly"""
|
"""Stop heat chill"""
|
||||||
self.logger.info(f"HeatChillStop: vessel={vessel}")
|
self.logger.info(f"HeatChillStop: vessel={vessel}")
|
||||||
|
|
||||||
self.data["status"] = f"停止加热/冷却: {vessel}"
|
self.data.update({
|
||||||
|
"status": f"已停止: {vessel} 温控停止",
|
||||||
|
"operation_mode": "Stopped",
|
||||||
|
"is_stirring": False,
|
||||||
|
"stir_speed": 0.0,
|
||||||
|
"remaining_time": 0.0,
|
||||||
|
})
|
||||||
|
|
||||||
return True
|
return True
|
||||||
|
|
||||||
# 状态属性 - 只保留 action 中定义的 feedback
|
# 状态属性
|
||||||
@property
|
@property
|
||||||
def status(self) -> str:
|
def status(self) -> str:
|
||||||
return self.data.get("status", "Idle")
|
return self.data.get("status", "Idle")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def operation_mode(self) -> str:
|
||||||
|
return self.data.get("operation_mode", "Idle")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def is_stirring(self) -> bool:
|
||||||
|
return self.data.get("is_stirring", False)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def stir_speed(self) -> float:
|
||||||
|
return self.data.get("stir_speed", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def remaining_time(self) -> float:
|
||||||
|
return self.data.get("remaining_time", 0.0)
|
||||||
231
unilabos/devices/virtual/virtual_multiway_valve.py
Normal file
231
unilabos/devices/virtual/virtual_multiway_valve.py
Normal file
@@ -0,0 +1,231 @@
|
|||||||
|
import time
|
||||||
|
from typing import Union, Dict, Optional
|
||||||
|
|
||||||
|
|
||||||
|
class VirtualMultiwayValve:
|
||||||
|
"""
|
||||||
|
虚拟九通阀门 - 0号位连接transfer pump，1-8号位连接其他设备
|
||||||
|
"""
|
||||||
|
def __init__(self, port: str = "VIRTUAL", positions: int = 8):
|
||||||
|
self.port = port
|
||||||
|
self.max_positions = positions # 1-8号位
|
||||||
|
self.total_positions = positions + 1 # 0-8号位，共9个位置
|
||||||
|
|
||||||
|
# 状态属性
|
||||||
|
self._status = "Idle"
|
||||||
|
self._valve_state = "Ready"
|
||||||
|
self._current_position = 0 # 默认在0号位（transfer pump位置）
|
||||||
|
self._target_position = 0
|
||||||
|
|
||||||
|
# 位置映射说明
|
||||||
|
self.position_map = {
|
||||||
|
0: "transfer_pump", # 0号位连接转移泵
|
||||||
|
1: "port_1", # 1号位
|
||||||
|
2: "port_2", # 2号位
|
||||||
|
3: "port_3", # 3号位
|
||||||
|
4: "port_4", # 4号位
|
||||||
|
5: "port_5", # 5号位
|
||||||
|
6: "port_6", # 6号位
|
||||||
|
7: "port_7", # 7号位
|
||||||
|
8: "port_8" # 8号位
|
||||||
|
}
|
||||||
|
|
||||||
|
@property
|
||||||
|
def status(self) -> str:
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
@property
|
||||||
|
def valve_state(self) -> str:
|
||||||
|
return self._valve_state
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_position(self) -> int:
|
||||||
|
return self._current_position
|
||||||
|
|
||||||
|
@property
|
||||||
|
def target_position(self) -> int:
|
||||||
|
return self._target_position
|
||||||
|
|
||||||
|
def get_current_position(self) -> int:
|
||||||
|
"""获取当前阀门位置"""
|
||||||
|
return self._current_position
|
||||||
|
|
||||||
|
def get_current_port(self) -> str:
|
||||||
|
"""获取当前连接的端口名称"""
|
||||||
|
return self.position_map.get(self._current_position, "unknown")
|
||||||
|
|
||||||
|
def set_position(self, command: Union[int, str]):
|
||||||
|
"""
|
||||||
|
设置阀门位置 - 支持0-8位置
|
||||||
|
|
||||||
|
Args:
|
||||||
|
command: 目标位置 (0-8) 或位置字符串
|
||||||
|
0: transfer pump位置
|
||||||
|
1-8: 其他设备位置
|
||||||
|
"""
|
||||||
|
try:
|
||||||
|
# 如果是字符串形式的位置，先转换为数字
|
||||||
|
if isinstance(command, str):
|
||||||
|
pos = int(command)
|
||||||
|
else:
|
||||||
|
pos = int(command)
|
||||||
|
|
||||||
|
if pos < 0 or pos > self.max_positions:
|
||||||
|
raise ValueError(f"Position must be between 0 and {self.max_positions}")
|
||||||
|
|
||||||
|
self._status = "Busy"
|
||||||
|
self._valve_state = "Moving"
|
||||||
|
self._target_position = pos
|
||||||
|
|
||||||
|
# 模拟阀门切换时间
|
||||||
|
switch_time = abs(self._current_position - pos) * 0.5 # 每个位置0.5秒
|
||||||
|
time.sleep(switch_time)
|
||||||
|
|
||||||
|
self._current_position = pos
|
||||||
|
self._status = "Idle"
|
||||||
|
self._valve_state = "Ready"
|
||||||
|
|
||||||
|
current_port = self.get_current_port()
|
||||||
|
return f"Position set to {pos} ({current_port})"
|
||||||
|
|
||||||
|
except ValueError as e:
|
||||||
|
self._status = "Error"
|
||||||
|
self._valve_state = "Error"
|
||||||
|
return f"Error: {str(e)}"
|
||||||
|
|
||||||
|
def set_to_pump_position(self):
|
||||||
|
"""切换到transfer pump位置（0号位）"""
|
||||||
|
return self.set_position(0)
|
||||||
|
|
||||||
|
def set_to_port(self, port_number: int):
|
||||||
|
"""
|
||||||
|
切换到指定端口位置
|
||||||
|
|
||||||
|
Args:
|
||||||
|
port_number: 端口号 (1-8)
|
||||||
|
"""
|
||||||
|
if port_number < 1 or port_number > self.max_positions:
|
||||||
|
raise ValueError(f"Port number must be between 1 and {self.max_positions}")
|
||||||
|
return self.set_position(port_number)
|
||||||
|
|
||||||
|
def open(self):
|
||||||
|
"""打开阀门 - 设置到transfer pump位置（0号位）"""
|
||||||
|
return self.set_to_pump_position()
|
||||||
|
|
||||||
|
def close(self):
|
||||||
|
"""关闭阀门 - 对于多通阀门，设置到一个"关闭"状态"""
|
||||||
|
self._status = "Busy"
|
||||||
|
self._valve_state = "Closing"
|
||||||
|
time.sleep(0.5)
|
||||||
|
|
||||||
|
# 可以选择保持当前位置或设置特殊关闭状态
|
||||||
|
self._status = "Idle"
|
||||||
|
self._valve_state = "Closed"
|
||||||
|
|
||||||
|
return f"Valve closed at position {self._current_position}"
|
||||||
|
|
||||||
|
def get_valve_position(self) -> int:
|
||||||
|
"""获取阀门位置 - 兼容性方法"""
|
||||||
|
return self._current_position
|
||||||
|
|
||||||
|
def is_at_position(self, position: int) -> bool:
|
||||||
|
"""检查是否在指定位置"""
|
||||||
|
return self._current_position == position
|
||||||
|
|
||||||
|
def is_at_pump_position(self) -> bool:
|
||||||
|
"""检查是否在transfer pump位置"""
|
||||||
|
return self._current_position == 0
|
||||||
|
|
||||||
|
def is_at_port(self, port_number: int) -> bool:
|
||||||
|
"""检查是否在指定端口位置"""
|
||||||
|
return self._current_position == port_number
|
||||||
|
|
||||||
|
def get_available_positions(self) -> list:
|
||||||
|
"""获取可用位置列表"""
|
||||||
|
return list(range(0, self.max_positions + 1))
|
||||||
|
|
||||||
|
def get_available_ports(self) -> Dict[int, str]:
|
||||||
|
"""获取可用端口映射"""
|
||||||
|
return self.position_map.copy()
|
||||||
|
|
||||||
|
def reset(self):
|
||||||
|
"""重置阀门到transfer pump位置（0号位）"""
|
||||||
|
return self.set_position(0)
|
||||||
|
|
||||||
|
def switch_between_pump_and_port(self, port_number: int):
|
||||||
|
"""
|
||||||
|
在transfer pump位置和指定端口之间切换
|
||||||
|
|
||||||
|
Args:
|
||||||
|
port_number: 目标端口号 (1-8)
|
||||||
|
"""
|
||||||
|
if self._current_position == 0:
|
||||||
|
# 当前在pump位置，切换到指定端口
|
||||||
|
return self.set_to_port(port_number)
|
||||||
|
else:
|
||||||
|
# 当前在某个端口，切换到pump位置
|
||||||
|
return self.set_to_pump_position()
|
||||||
|
|
||||||
|
def get_flow_path(self) -> str:
|
||||||
|
"""获取当前流路路径描述"""
|
||||||
|
current_port = self.get_current_port()
|
||||||
|
if self._current_position == 0:
|
||||||
|
return f"Transfer pump connected (position {self._current_position})"
|
||||||
|
else:
|
||||||
|
return f"Port {self._current_position} connected ({current_port})"
|
||||||
|
|
||||||
|
def get_info(self) -> dict:
|
||||||
|
"""获取阀门详细信息"""
|
||||||
|
return {
|
||||||
|
"port": self.port,
|
||||||
|
"max_positions": self.max_positions,
|
||||||
|
"total_positions": self.total_positions,
|
||||||
|
"current_position": self._current_position,
|
||||||
|
"current_port": self.get_current_port(),
|
||||||
|
"target_position": self._target_position,
|
||||||
|
"status": self._status,
|
||||||
|
"valve_state": self._valve_state,
|
||||||
|
"flow_path": self.get_flow_path(),
|
||||||
|
"position_map": self.position_map
|
||||||
|
}
|
||||||
|
|
||||||
|
def __str__(self):
|
||||||
|
return f"VirtualMultiwayValve(Position: {self._current_position}/{self.max_positions}, Port: {self.get_current_port()}, Status: {self._status})"
|
||||||
|
|
||||||
|
def set_valve_position(self, command: Union[int, str]):
|
||||||
|
"""
|
||||||
|
设置阀门位置 - 兼容pump_protocol调用
|
||||||
|
这是set_position的别名方法，用于兼容pump_protocol.py
|
||||||
|
|
||||||
|
Args:
|
||||||
|
command: 目标位置 (0-8) 或位置字符串
|
||||||
|
"""
|
||||||
|
return self.set_position(command)
|
||||||
|
|
||||||
|
|
||||||
|
# 使用示例
|
||||||
|
if __name__ == "__main__":
|
||||||
|
valve = VirtualMultiwayValve()
|
||||||
|
|
||||||
|
print("=== 虚拟九通阀门测试 ===")
|
||||||
|
print(f"初始状态: {valve}")
|
||||||
|
print(f"当前流路: {valve.get_flow_path()}")
|
||||||
|
|
||||||
|
# 切换到试剂瓶1（1号位）
|
||||||
|
print(f"\n切换到1号位: {valve.set_position(1)}")
|
||||||
|
print(f"当前状态: {valve}")
|
||||||
|
|
||||||
|
# 切换到transfer pump位置（0号位）
|
||||||
|
print(f"\n切换到pump位置: {valve.set_to_pump_position()}")
|
||||||
|
print(f"当前状态: {valve}")
|
||||||
|
|
||||||
|
# 切换到试剂瓶2（2号位）
|
||||||
|
print(f"\n切换到2号位: {valve.set_to_port(2)}")
|
||||||
|
print(f"当前状态: {valve}")
|
||||||
|
|
||||||
|
# 显示所有可用位置
|
||||||
|
print(f"\n可用位置: {valve.get_available_positions()}")
|
||||||
|
print(f"端口映射: {valve.get_available_ports()}")
|
||||||
|
|
||||||
|
# 获取详细信息
|
||||||
|
print(f"\n详细信息: {valve.get_info()}")
|
||||||
228
unilabos/devices/virtual/virtual_rotavap.py
Normal file
228
unilabos/devices/virtual/virtual_rotavap.py
Normal file
@@ -0,0 +1,228 @@
|
|||||||
|
import asyncio
|
||||||
|
import logging
|
||||||
|
import time as time_module
|
||||||
|
from typing import Dict, Any, Optional
|
||||||
|
|
||||||
|
|
||||||
|
class VirtualRotavap:
|
||||||
|
"""Virtual rotary evaporator device - 简化版，只保留核心功能"""
|
||||||
|
|
||||||
|
def __init__(self, device_id: Optional[str] = None, config: Optional[Dict[str, Any]] = None, **kwargs):
|
||||||
|
# 处理可能的不同调用方式
|
||||||
|
if device_id is None and "id" in kwargs:
|
||||||
|
device_id = kwargs.pop("id")
|
||||||
|
if config is None and "config" in kwargs:
|
||||||
|
config = kwargs.pop("config")
|
||||||
|
|
||||||
|
# 设置默认值
|
||||||
|
self.device_id = device_id or "unknown_rotavap"
|
||||||
|
self.config = config or {}
|
||||||
|
|
||||||
|
self.logger = logging.getLogger(f"VirtualRotavap.{self.device_id}")
|
||||||
|
self.data = {}
|
||||||
|
|
||||||
|
# 从config或kwargs中获取配置参数
|
||||||
|
self.port = self.config.get("port") or kwargs.get("port", "VIRTUAL")
|
||||||
|
self._max_temp = self.config.get("max_temp") or kwargs.get("max_temp", 180.0)
|
||||||
|
self._max_rotation_speed = self.config.get("max_rotation_speed") or kwargs.get("max_rotation_speed", 280.0)
|
||||||
|
|
||||||
|
# 处理其他kwargs参数
|
||||||
|
skip_keys = {"port", "max_temp", "max_rotation_speed"}
|
||||||
|
for key, value in kwargs.items():
|
||||||
|
if key not in skip_keys and not hasattr(self, key):
|
||||||
|
setattr(self, key, value)
|
||||||
|
|
||||||
|
async def initialize(self) -> bool:
|
||||||
|
"""Initialize virtual rotary evaporator"""
|
||||||
|
self.logger.info(f"Initializing virtual rotary evaporator {self.device_id}")
|
||||||
|
|
||||||
|
# 只保留核心状态
|
||||||
|
self.data.update({
|
||||||
|
"status": "Idle",
|
||||||
|
"rotavap_state": "Ready", # Ready, Evaporating, Completed, Error
|
||||||
|
"current_temp": 25.0,
|
||||||
|
"target_temp": 25.0,
|
||||||
|
"rotation_speed": 0.0,
|
||||||
|
"vacuum_pressure": 1.0, # 大气压
|
||||||
|
"evaporated_volume": 0.0,
|
||||||
|
"progress": 0.0,
|
||||||
|
"remaining_time": 0.0,
|
||||||
|
"message": "Ready for evaporation"
|
||||||
|
})
|
||||||
|
return True
|
||||||
|
|
||||||
|
async def cleanup(self) -> bool:
|
||||||
|
"""Cleanup virtual rotary evaporator"""
|
||||||
|
self.logger.info(f"Cleaning up virtual rotary evaporator {self.device_id}")
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": "Offline",
|
||||||
|
"rotavap_state": "Offline",
|
||||||
|
"current_temp": 25.0,
|
||||||
|
"rotation_speed": 0.0,
|
||||||
|
"vacuum_pressure": 1.0,
|
||||||
|
"message": "System offline"
|
||||||
|
})
|
||||||
|
return True
|
||||||
|
|
||||||
|
async def evaporate(
|
||||||
|
self,
|
||||||
|
vessel: str,
|
||||||
|
pressure: float = 0.1,
|
||||||
|
temp: float = 60.0,
|
||||||
|
time: float = 1800.0, # 30分钟默认
|
||||||
|
stir_speed: float = 100.0
|
||||||
|
) -> bool:
|
||||||
|
"""Execute evaporate action - 简化的蒸发流程"""
|
||||||
|
self.logger.info(f"Evaporate: vessel={vessel}, pressure={pressure} bar, temp={temp}°C, time={time}s, rotation={stir_speed} RPM")
|
||||||
|
|
||||||
|
# 验证参数
|
||||||
|
if temp > self._max_temp or temp < 10.0:
|
||||||
|
error_msg = f"温度 {temp}°C 超出范围 (10-{self._max_temp}°C)"
|
||||||
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"rotavap_state": "Error",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
|
return False
|
||||||
|
|
||||||
|
if stir_speed > self._max_rotation_speed or stir_speed < 10.0:
|
||||||
|
error_msg = f"旋转速度 {stir_speed} RPM 超出范围 (10-{self._max_rotation_speed} RPM)"
|
||||||
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"rotavap_state": "Error",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
|
return False
|
||||||
|
|
||||||
|
if pressure < 0.01 or pressure > 1.0:
|
||||||
|
error_msg = f"真空度 {pressure} bar 超出范围 (0.01-1.0 bar)"
|
||||||
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"rotavap_state": "Error",
|
||||||
|
"message": error_msg
|
||||||
|
})
|
||||||
|
return False
|
||||||
|
|
||||||
|
# 开始蒸发
|
||||||
|
self.data.update({
|
||||||
|
"status": f"蒸发中: {vessel}",
|
||||||
|
"rotavap_state": "Evaporating",
|
||||||
|
"current_temp": temp,
|
||||||
|
"target_temp": temp,
|
||||||
|
"rotation_speed": stir_speed,
|
||||||
|
"vacuum_pressure": pressure,
|
||||||
|
"remaining_time": time,
|
||||||
|
"progress": 0.0,
|
||||||
|
"evaporated_volume": 0.0,
|
||||||
|
"message": f"Evaporating {vessel} at {temp}°C, {pressure} bar, {stir_speed} RPM"
|
||||||
|
})
|
||||||
|
|
||||||
|
try:
|
||||||
|
# 蒸发过程 - 实时更新进度
|
||||||
|
start_time = time_module.time()
|
||||||
|
total_time = time
|
||||||
|
|
||||||
|
while True:
|
||||||
|
current_time = time_module.time()
|
||||||
|
elapsed = current_time - start_time
|
||||||
|
remaining = max(0, total_time - elapsed)
|
||||||
|
progress = min(100.0, (elapsed / total_time) * 100)
|
||||||
|
|
||||||
|
# 模拟蒸发体积
|
||||||
|
evaporated_vol = progress * 0.8 # 假设最多蒸发80mL
|
||||||
|
|
||||||
|
# 更新状态
|
||||||
|
self.data.update({
|
||||||
|
"remaining_time": remaining,
|
||||||
|
"progress": progress,
|
||||||
|
"evaporated_volume": evaporated_vol,
|
||||||
|
"status": f"蒸发中: {vessel} | {temp}°C | {pressure} bar | {progress:.1f}% | 剩余: {remaining:.0f}s",
|
||||||
|
"message": f"Evaporating: {progress:.1f}% complete, {remaining:.0f}s remaining"
|
||||||
|
})
|
||||||
|
|
||||||
|
# 时间到了，退出循环
|
||||||
|
if remaining <= 0:
|
||||||
|
break
|
||||||
|
|
||||||
|
# 每秒更新一次
|
||||||
|
await asyncio.sleep(1.0)
|
||||||
|
|
||||||
|
# 蒸发完成
|
||||||
|
final_evaporated = 80.0
|
||||||
|
self.data.update({
|
||||||
|
"status": f"蒸发完成: {vessel} | 蒸发量: {final_evaporated:.1f}mL",
|
||||||
|
"rotavap_state": "Completed",
|
||||||
|
"evaporated_volume": final_evaporated,
|
||||||
|
"progress": 100.0,
|
||||||
|
"remaining_time": 0.0,
|
||||||
|
"current_temp": 25.0, # 冷却下来
|
||||||
|
"rotation_speed": 0.0, # 停止旋转
|
||||||
|
"vacuum_pressure": 1.0, # 恢复大气压
|
||||||
|
"message": f"Evaporation completed: {final_evaporated}mL evaporated from {vessel}"
|
||||||
|
})
|
||||||
|
|
||||||
|
self.logger.info(f"Evaporation completed: {final_evaporated}mL evaporated from {vessel}")
|
||||||
|
return True
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
# 出错处理
|
||||||
|
self.logger.error(f"Error during evaporation: {str(e)}")
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": f"蒸发错误: {str(e)}",
|
||||||
|
"rotavap_state": "Error",
|
||||||
|
"current_temp": 25.0,
|
||||||
|
"rotation_speed": 0.0,
|
||||||
|
"vacuum_pressure": 1.0,
|
||||||
|
"message": f"Evaporation failed: {str(e)}"
|
||||||
|
})
|
||||||
|
return False
|
||||||
|
|
||||||
|
# === 核心状态属性 ===
|
||||||
|
@property
|
||||||
|
def status(self) -> str:
|
||||||
|
return self.data.get("status", "Unknown")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def rotavap_state(self) -> str:
|
||||||
|
return self.data.get("rotavap_state", "Unknown")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_temp(self) -> float:
|
||||||
|
return self.data.get("current_temp", 25.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def rotation_speed(self) -> float:
|
||||||
|
return self.data.get("rotation_speed", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def vacuum_pressure(self) -> float:
|
||||||
|
return self.data.get("vacuum_pressure", 1.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def evaporated_volume(self) -> float:
|
||||||
|
return self.data.get("evaporated_volume", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def progress(self) -> float:
|
||||||
|
return self.data.get("progress", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def message(self) -> str:
|
||||||
|
return self.data.get("message", "")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def max_temp(self) -> float:
|
||||||
|
return self._max_temp
|
||||||
|
|
||||||
|
@property
|
||||||
|
def max_rotation_speed(self) -> float:
|
||||||
|
return self._max_rotation_speed
|
||||||
|
|
||||||
|
@property
|
||||||
|
def remaining_time(self) -> float:
|
||||||
|
return self.data.get("remaining_time", 0.0)
|
||||||
184
unilabos/devices/virtual/virtual_separator.py
Normal file
184
unilabos/devices/virtual/virtual_separator.py
Normal file
@@ -0,0 +1,184 @@
|
|||||||
|
import asyncio
|
||||||
|
import logging
|
||||||
|
from typing import Dict, Any, Optional
|
||||||
|
|
||||||
|
|
||||||
|
class VirtualSeparator:
|
||||||
|
"""Virtual separator device for SeparateProtocol testing"""
|
||||||
|
|
||||||
|
def __init__(self, device_id: Optional[str] = None, config: Optional[Dict[str, Any]] = None, **kwargs):
|
||||||
|
# 处理可能的不同调用方式
|
||||||
|
if device_id is None and "id" in kwargs:
|
||||||
|
device_id = kwargs.pop("id")
|
||||||
|
if config is None and "config" in kwargs:
|
||||||
|
config = kwargs.pop("config")
|
||||||
|
|
||||||
|
# 设置默认值
|
||||||
|
self.device_id = device_id or "unknown_separator"
|
||||||
|
self.config = config or {}
|
||||||
|
|
||||||
|
self.logger = logging.getLogger(f"VirtualSeparator.{self.device_id}")
|
||||||
|
self.data = {}
|
||||||
|
|
||||||
|
# 添加调试信息
|
||||||
|
print(f"=== VirtualSeparator {self.device_id} is being created! ===")
|
||||||
|
print(f"=== Config: {self.config} ===")
|
||||||
|
print(f"=== Kwargs: {kwargs} ===")
|
||||||
|
|
||||||
|
# 从config或kwargs中获取配置参数
|
||||||
|
self.port = self.config.get("port") or kwargs.get("port", "VIRTUAL")
|
||||||
|
self._volume = self.config.get("volume") or kwargs.get("volume", 250.0)
|
||||||
|
self._has_phases = self.config.get("has_phases") or kwargs.get("has_phases", True)
|
||||||
|
|
||||||
|
# 处理其他kwargs参数，但跳过已知的配置参数
|
||||||
|
skip_keys = {"port", "volume", "has_phases"}
|
||||||
|
for key, value in kwargs.items():
|
||||||
|
if key not in skip_keys and not hasattr(self, key):
|
||||||
|
setattr(self, key, value)
|
||||||
|
|
||||||
|
async def initialize(self) -> bool:
|
||||||
|
"""Initialize virtual separator"""
|
||||||
|
print(f"=== VirtualSeparator {self.device_id} initialize() called! ===")
|
||||||
|
self.logger.info(f"Initializing virtual separator {self.device_id}")
|
||||||
|
self.data.update(
|
||||||
|
{
|
||||||
|
"status": "Ready",
|
||||||
|
"separator_state": "Ready",
|
||||||
|
"volume": self._volume,
|
||||||
|
"has_phases": self._has_phases,
|
||||||
|
"phase_separation": False,
|
||||||
|
"stir_speed": 0.0,
|
||||||
|
"settling_time": 0.0,
|
||||||
|
"progress": 0.0,
|
||||||
|
"message": "",
|
||||||
|
}
|
||||||
|
)
|
||||||
|
return True
|
||||||
|
|
||||||
|
async def cleanup(self) -> bool:
|
||||||
|
"""Cleanup virtual separator"""
|
||||||
|
self.logger.info(f"Cleaning up virtual separator {self.device_id}")
|
||||||
|
return True
|
||||||
|
|
||||||
|
async def separate(
|
||||||
|
self,
|
||||||
|
purpose: str,
|
||||||
|
product_phase: str,
|
||||||
|
from_vessel: str,
|
||||||
|
separation_vessel: str,
|
||||||
|
to_vessel: str,
|
||||||
|
waste_phase_to_vessel: str = "",
|
||||||
|
solvent: str = "",
|
||||||
|
solvent_volume: float = 50.0,
|
||||||
|
through: str = "",
|
||||||
|
repeats: int = 1,
|
||||||
|
stir_time: float = 30.0,
|
||||||
|
stir_speed: float = 300.0,
|
||||||
|
settling_time: float = 300.0,
|
||||||
|
) -> bool:
|
||||||
|
"""Execute separate action - matches Separate action"""
|
||||||
|
self.logger.info(f"Separate: purpose={purpose}, product_phase={product_phase}, from_vessel={from_vessel}")
|
||||||
|
|
||||||
|
# 验证参数
|
||||||
|
if product_phase not in ["top", "bottom"]:
|
||||||
|
self.logger.error(f"Invalid product_phase {product_phase}, must be 'top' or 'bottom'")
|
||||||
|
self.data["message"] = f"产物相位 {product_phase} 无效，必须是 'top' 或 'bottom'"
|
||||||
|
return False
|
||||||
|
|
||||||
|
if purpose not in ["wash", "extract"]:
|
||||||
|
self.logger.error(f"Invalid purpose {purpose}, must be 'wash' or 'extract'")
|
||||||
|
self.data["message"] = f"分离目的 {purpose} 无效，必须是 'wash' 或 'extract'"
|
||||||
|
return False
|
||||||
|
|
||||||
|
# 开始分离
|
||||||
|
self.data.update(
|
||||||
|
{
|
||||||
|
"status": "Running",
|
||||||
|
"separator_state": "Separating",
|
||||||
|
"purpose": purpose,
|
||||||
|
"product_phase": product_phase,
|
||||||
|
"from_vessel": from_vessel,
|
||||||
|
"separation_vessel": separation_vessel,
|
||||||
|
"to_vessel": to_vessel,
|
||||||
|
"waste_phase_to_vessel": waste_phase_to_vessel,
|
||||||
|
"solvent": solvent,
|
||||||
|
"solvent_volume": solvent_volume,
|
||||||
|
"repeats": repeats,
|
||||||
|
"stir_speed": stir_speed,
|
||||||
|
"settling_time": settling_time,
|
||||||
|
"phase_separation": True,
|
||||||
|
"progress": 0.0,
|
||||||
|
"message": f"正在分离: {from_vessel} -> {to_vessel}",
|
||||||
|
}
|
||||||
|
)
|
||||||
|
|
||||||
|
# 模拟分离过程
|
||||||
|
total_time = (stir_time + settling_time) * repeats
|
||||||
|
simulation_time = min(total_time / 60.0, 15.0) # 最多模拟15秒
|
||||||
|
|
||||||
|
for repeat in range(repeats):
|
||||||
|
# 搅拌阶段
|
||||||
|
for progress in range(0, 51, 10):
|
||||||
|
await asyncio.sleep(simulation_time / (repeats * 10))
|
||||||
|
overall_progress = ((repeat * 100) + (progress * 0.5)) / repeats
|
||||||
|
self.data["progress"] = overall_progress
|
||||||
|
self.data["message"] = f"第{repeat+1}次分离 - 搅拌中 ({progress}%)"
|
||||||
|
|
||||||
|
# 静置分相阶段
|
||||||
|
for progress in range(50, 101, 10):
|
||||||
|
await asyncio.sleep(simulation_time / (repeats * 10))
|
||||||
|
overall_progress = ((repeat * 100) + (progress * 0.5)) / repeats
|
||||||
|
self.data["progress"] = overall_progress
|
||||||
|
self.data["message"] = f"第{repeat+1}次分离 - 静置分相中 ({progress}%)"
|
||||||
|
|
||||||
|
# 分离完成
|
||||||
|
self.data.update(
|
||||||
|
{
|
||||||
|
"status": "Ready",
|
||||||
|
"separator_state": "Ready",
|
||||||
|
"phase_separation": False,
|
||||||
|
"stir_speed": 0.0,
|
||||||
|
"progress": 100.0,
|
||||||
|
"message": f"分离完成: {repeats}次分离操作",
|
||||||
|
}
|
||||||
|
)
|
||||||
|
|
||||||
|
self.logger.info(f"Separation completed: {repeats} cycles from {from_vessel} to {to_vessel}")
|
||||||
|
return True
|
||||||
|
|
||||||
|
# 状态属性
|
||||||
|
@property
|
||||||
|
def status(self) -> str:
|
||||||
|
return self.data.get("status", "Unknown")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def separator_state(self) -> str:
|
||||||
|
return self.data.get("separator_state", "Unknown")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def volume(self) -> float:
|
||||||
|
return self.data.get("volume", self._volume)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def has_phases(self) -> bool:
|
||||||
|
return self.data.get("has_phases", self._has_phases)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def phase_separation(self) -> bool:
|
||||||
|
return self.data.get("phase_separation", False)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def stir_speed(self) -> float:
|
||||||
|
return self.data.get("stir_speed", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def settling_time(self) -> float:
|
||||||
|
return self.data.get("settling_time", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def progress(self) -> float:
|
||||||
|
return self.data.get("progress", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def message(self) -> str:
|
||||||
|
return self.data.get("message", "")
|
||||||
147
unilabos/devices/virtual/virtual_solenoid_valve.py
Normal file
147
unilabos/devices/virtual/virtual_solenoid_valve.py
Normal file
@@ -0,0 +1,147 @@
|
|||||||
|
import time
|
||||||
|
import asyncio
|
||||||
|
from typing import Union
|
||||||
|
|
||||||
|
|
||||||
|
class VirtualSolenoidValve:
|
||||||
|
"""
|
||||||
|
虚拟电磁阀门 - 简单的开关型阀门，只有开启和关闭两个状态
|
||||||
|
"""
|
||||||
|
def __init__(self, device_id: str = None, config: dict = None, **kwargs):
|
||||||
|
# 从配置中获取参数，提供默认值
|
||||||
|
if config is None:
|
||||||
|
config = {}
|
||||||
|
|
||||||
|
self.device_id = device_id
|
||||||
|
self.port = config.get("port", "VIRTUAL")
|
||||||
|
self.voltage = config.get("voltage", 12.0)
|
||||||
|
self.response_time = config.get("response_time", 0.1)
|
||||||
|
|
||||||
|
# 状态属性
|
||||||
|
self._status = "Idle"
|
||||||
|
self._valve_state = "Closed" # "Open" or "Closed"
|
||||||
|
self._is_open = False
|
||||||
|
|
||||||
|
async def initialize(self) -> bool:
|
||||||
|
"""初始化设备"""
|
||||||
|
self._status = "Idle"
|
||||||
|
return True
|
||||||
|
|
||||||
|
async def cleanup(self) -> bool:
|
||||||
|
"""清理资源"""
|
||||||
|
return True
|
||||||
|
|
||||||
|
@property
|
||||||
|
def status(self) -> str:
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
@property
|
||||||
|
def valve_state(self) -> str:
|
||||||
|
return self._valve_state
|
||||||
|
|
||||||
|
@property
|
||||||
|
def is_open(self) -> bool:
|
||||||
|
return self._is_open
|
||||||
|
|
||||||
|
def get_valve_position(self) -> str:
|
||||||
|
"""获取阀门位置状态"""
|
||||||
|
return "OPEN" if self._is_open else "CLOSED"
|
||||||
|
|
||||||
|
async def set_valve_position(self, command: str = None, **kwargs):
|
||||||
|
"""
|
||||||
|
设置阀门位置 - ROS动作接口
|
||||||
|
|
||||||
|
Args:
|
||||||
|
command: "OPEN"/"CLOSED" 或其他控制命令
|
||||||
|
"""
|
||||||
|
if command is None:
|
||||||
|
return {"success": False, "message": "Missing command parameter"}
|
||||||
|
|
||||||
|
print(f"SOLENOID_VALVE: {self.device_id} 接收到命令: {command}")
|
||||||
|
|
||||||
|
self._status = "Busy"
|
||||||
|
|
||||||
|
# 模拟阀门响应时间
|
||||||
|
await asyncio.sleep(self.response_time)
|
||||||
|
|
||||||
|
# 处理不同的命令格式
|
||||||
|
if isinstance(command, str):
|
||||||
|
cmd_upper = command.upper()
|
||||||
|
if cmd_upper in ["OPEN", "ON", "TRUE", "1"]:
|
||||||
|
self._is_open = True
|
||||||
|
self._valve_state = "Open"
|
||||||
|
result_msg = f"Valve {self.device_id} opened"
|
||||||
|
elif cmd_upper in ["CLOSED", "CLOSE", "OFF", "FALSE", "0"]:
|
||||||
|
self._is_open = False
|
||||||
|
self._valve_state = "Closed"
|
||||||
|
result_msg = f"Valve {self.device_id} closed"
|
||||||
|
else:
|
||||||
|
# 可能是端口名称，处理路径设置
|
||||||
|
# 对于简单电磁阀，任何非关闭命令都视为开启
|
||||||
|
self._is_open = True
|
||||||
|
self._valve_state = "Open"
|
||||||
|
result_msg = f"Valve {self.device_id} set to position: {command}"
|
||||||
|
else:
|
||||||
|
self._status = "Error"
|
||||||
|
return {"success": False, "message": "Invalid command type"}
|
||||||
|
|
||||||
|
self._status = "Idle"
|
||||||
|
print(f"SOLENOID_VALVE: {result_msg}")
|
||||||
|
|
||||||
|
return {
|
||||||
|
"success": True,
|
||||||
|
"message": result_msg,
|
||||||
|
"valve_position": self.get_valve_position()
|
||||||
|
}
|
||||||
|
|
||||||
|
async def open(self, **kwargs):
|
||||||
|
"""打开电磁阀 - ROS动作接口"""
|
||||||
|
return await self.set_valve_position(command="OPEN")
|
||||||
|
|
||||||
|
async def close(self, **kwargs):
|
||||||
|
"""关闭电磁阀 - ROS动作接口"""
|
||||||
|
return await self.set_valve_position(command="CLOSED")
|
||||||
|
|
||||||
|
async def set_state(self, command: Union[bool, str], **kwargs):
|
||||||
|
"""
|
||||||
|
设置阀门状态 - 兼容 SendCmd 类型
|
||||||
|
|
||||||
|
Args:
|
||||||
|
command: True/False 或 "open"/"close"
|
||||||
|
"""
|
||||||
|
if isinstance(command, bool):
|
||||||
|
cmd_str = "OPEN" if command else "CLOSED"
|
||||||
|
elif isinstance(command, str):
|
||||||
|
cmd_str = command
|
||||||
|
else:
|
||||||
|
return {"success": False, "message": "Invalid command type"}
|
||||||
|
|
||||||
|
return await self.set_valve_position(command=cmd_str)
|
||||||
|
|
||||||
|
def toggle(self):
|
||||||
|
"""切换阀门状态"""
|
||||||
|
if self._is_open:
|
||||||
|
return self.close()
|
||||||
|
else:
|
||||||
|
return self.open()
|
||||||
|
|
||||||
|
def is_closed(self) -> bool:
|
||||||
|
"""检查阀门是否关闭"""
|
||||||
|
return not self._is_open
|
||||||
|
|
||||||
|
def get_state(self) -> dict:
|
||||||
|
"""获取阀门完整状态"""
|
||||||
|
return {
|
||||||
|
"device_id": self.device_id,
|
||||||
|
"port": self.port,
|
||||||
|
"voltage": self.voltage,
|
||||||
|
"response_time": self.response_time,
|
||||||
|
"is_open": self._is_open,
|
||||||
|
"valve_state": self._valve_state,
|
||||||
|
"status": self._status,
|
||||||
|
"position": self.get_valve_position()
|
||||||
|
}
|
||||||
|
|
||||||
|
async def reset(self):
|
||||||
|
"""重置阀门到关闭状态"""
|
||||||
|
return await self.close()
|
||||||
@@ -1,9 +1,10 @@
|
|||||||
import asyncio
|
import asyncio
|
||||||
import logging
|
import logging
|
||||||
|
import time as time_module
|
||||||
from typing import Dict, Any
|
from typing import Dict, Any
|
||||||
|
|
||||||
class VirtualStirrer:
|
class VirtualStirrer:
|
||||||
"""Virtual stirrer device for StirProtocol testing"""
|
"""Virtual stirrer device for StirProtocol testing - 功能完整版"""
|
||||||
|
|
||||||
def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
|
def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
|
||||||
# 处理可能的不同调用方式
|
# 处理可能的不同调用方式
|
||||||
@@ -19,86 +20,196 @@ class VirtualStirrer:
|
|||||||
self.logger = logging.getLogger(f"VirtualStirrer.{self.device_id}")
|
self.logger = logging.getLogger(f"VirtualStirrer.{self.device_id}")
|
||||||
self.data = {}
|
self.data = {}
|
||||||
|
|
||||||
# 添加调试信息
|
|
||||||
print(f"=== VirtualStirrer {self.device_id} is being created! ===")
|
|
||||||
print(f"=== Config: {self.config} ===")
|
|
||||||
print(f"=== Kwargs: {kwargs} ===")
|
|
||||||
|
|
||||||
# 从config或kwargs中获取配置参数
|
# 从config或kwargs中获取配置参数
|
||||||
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
||||||
self._max_temp = self.config.get('max_temp') or kwargs.get('max_temp', 100.0)
|
self._max_speed = self.config.get('max_speed') or kwargs.get('max_speed', 1500.0)
|
||||||
self._max_speed = self.config.get('max_speed') or kwargs.get('max_speed', 1000.0)
|
self._min_speed = self.config.get('min_speed') or kwargs.get('min_speed', 50.0)
|
||||||
|
|
||||||
# 处理其他kwargs参数，但跳过已知的配置参数
|
# 处理其他kwargs参数
|
||||||
skip_keys = {'port', 'max_temp', 'max_speed'}
|
skip_keys = {'port', 'max_speed', 'min_speed'}
|
||||||
for key, value in kwargs.items():
|
for key, value in kwargs.items():
|
||||||
if key not in skip_keys and not hasattr(self, key):
|
if key not in skip_keys and not hasattr(self, key):
|
||||||
setattr(self, key, value)
|
setattr(self, key, value)
|
||||||
|
|
||||||
async def initialize(self) -> bool:
|
async def initialize(self) -> bool:
|
||||||
"""Initialize virtual stirrer"""
|
"""Initialize virtual stirrer"""
|
||||||
print(f"=== VirtualStirrer {self.device_id} initialize() called! ===")
|
|
||||||
self.logger.info(f"Initializing virtual stirrer {self.device_id}")
|
self.logger.info(f"Initializing virtual stirrer {self.device_id}")
|
||||||
|
|
||||||
|
# 初始化状态信息
|
||||||
self.data.update({
|
self.data.update({
|
||||||
"status": "Idle"
|
"status": "Idle",
|
||||||
|
"operation_mode": "Idle", # 操作模式: Idle, Stirring, Settling, Completed, Error
|
||||||
|
"current_vessel": "", # 当前搅拌的容器
|
||||||
|
"current_speed": 0.0, # 当前搅拌速度
|
||||||
|
"is_stirring": False, # 是否正在搅拌
|
||||||
|
"remaining_time": 0.0, # 剩余时间
|
||||||
})
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def cleanup(self) -> bool:
|
async def cleanup(self) -> bool:
|
||||||
"""Cleanup virtual stirrer"""
|
"""Cleanup virtual stirrer"""
|
||||||
self.logger.info(f"Cleaning up virtual stirrer {self.device_id}")
|
self.logger.info(f"Cleaning up virtual stirrer {self.device_id}")
|
||||||
|
self.data.update({
|
||||||
|
"status": "Offline",
|
||||||
|
"operation_mode": "Offline",
|
||||||
|
"current_vessel": "",
|
||||||
|
"current_speed": 0.0,
|
||||||
|
"is_stirring": False,
|
||||||
|
"remaining_time": 0.0,
|
||||||
|
})
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def stir(self, stir_time: float, stir_speed: float, settling_time: float) -> bool:
|
async def stir(self, stir_time: float, stir_speed: float, settling_time: float) -> bool:
|
||||||
"""Execute stir action - matches Stir action exactly"""
|
"""Execute stir action - 定时搅拌 + 沉降"""
|
||||||
self.logger.info(f"Stir: speed={stir_speed} RPM, time={stir_time}s, settling={settling_time}s")
|
self.logger.info(f"Stir: speed={stir_speed} RPM, time={stir_time}s, settling={settling_time}s")
|
||||||
|
|
||||||
# 验证参数
|
# 验证参数
|
||||||
if stir_speed > self._max_speed:
|
if stir_speed > self._max_speed or stir_speed < self._min_speed:
|
||||||
self.logger.error(f"Stir speed {stir_speed} exceeds maximum {self._max_speed}")
|
error_msg = f"搅拌速度 {stir_speed} RPM 超出范围 ({self._min_speed} - {self._max_speed} RPM)"
|
||||||
self.data["status"] = f"搅拌速度 {stir_speed} 超出范围"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"operation_mode": "Error"
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
# 开始搅拌
|
# === 第一阶段：搅拌 ===
|
||||||
self.data["status"] = f"搅拌中: {stir_speed} RPM, {stir_time}s"
|
start_time = time_module.time()
|
||||||
|
total_stir_time = stir_time
|
||||||
|
|
||||||
# 模拟搅拌时间
|
self.data.update({
|
||||||
simulation_time = min(stir_time, 10.0) # 最多等待10秒用于测试
|
"status": f"搅拌中: {stir_speed} RPM | 剩余: {total_stir_time:.0f}s",
|
||||||
await asyncio.sleep(simulation_time)
|
"operation_mode": "Stirring",
|
||||||
|
"current_speed": stir_speed,
|
||||||
|
"is_stirring": True,
|
||||||
|
"remaining_time": total_stir_time,
|
||||||
|
})
|
||||||
|
|
||||||
# 搅拌完成，开始沉降
|
# 搅拌过程 - 实时更新剩余时间
|
||||||
|
while True:
|
||||||
|
current_time = time_module.time()
|
||||||
|
elapsed = current_time - start_time
|
||||||
|
remaining = max(0, total_stir_time - elapsed)
|
||||||
|
|
||||||
|
# 更新状态
|
||||||
|
self.data.update({
|
||||||
|
"remaining_time": remaining,
|
||||||
|
"status": f"搅拌中: {stir_speed} RPM | 剩余: {remaining:.0f}s"
|
||||||
|
})
|
||||||
|
|
||||||
|
# 搅拌时间到了
|
||||||
|
if remaining <= 0:
|
||||||
|
break
|
||||||
|
|
||||||
|
await asyncio.sleep(1.0)
|
||||||
|
|
||||||
|
# === 第二阶段：沉降（如果需要）===
|
||||||
if settling_time > 0:
|
if settling_time > 0:
|
||||||
self.data["status"] = f"沉降中: {settling_time}s"
|
start_settling_time = time_module.time()
|
||||||
settling_simulation = min(settling_time, 5.0) # 最多等待5秒
|
total_settling_time = settling_time
|
||||||
await asyncio.sleep(settling_simulation)
|
|
||||||
|
self.data.update({
|
||||||
|
"status": f"沉降中: 停止搅拌 | 剩余: {total_settling_time:.0f}s",
|
||||||
|
"operation_mode": "Settling",
|
||||||
|
"current_speed": 0.0,
|
||||||
|
"is_stirring": False,
|
||||||
|
"remaining_time": total_settling_time,
|
||||||
|
})
|
||||||
|
|
||||||
|
# 沉降过程 - 实时更新剩余时间
|
||||||
|
while True:
|
||||||
|
current_time = time_module.time()
|
||||||
|
elapsed = current_time - start_settling_time
|
||||||
|
remaining = max(0, total_settling_time - elapsed)
|
||||||
|
|
||||||
|
# 更新状态
|
||||||
|
self.data.update({
|
||||||
|
"remaining_time": remaining,
|
||||||
|
"status": f"沉降中: 停止搅拌 | 剩余: {remaining:.0f}s"
|
||||||
|
})
|
||||||
|
|
||||||
|
# 沉降时间到了
|
||||||
|
if remaining <= 0:
|
||||||
|
break
|
||||||
|
|
||||||
|
await asyncio.sleep(1.0)
|
||||||
|
|
||||||
# 操作完成
|
# === 操作完成 ===
|
||||||
self.data["status"] = "搅拌完成"
|
settling_info = f" | 沉降: {settling_time:.0f}s" if settling_time > 0 else ""
|
||||||
|
self.data.update({
|
||||||
|
"status": f"完成: 搅拌 {stir_speed} RPM, {stir_time:.0f}s{settling_info}",
|
||||||
|
"operation_mode": "Completed",
|
||||||
|
"current_speed": 0.0,
|
||||||
|
"is_stirring": False,
|
||||||
|
"remaining_time": 0.0,
|
||||||
|
})
|
||||||
|
|
||||||
self.logger.info(f"Stir completed: {stir_speed} RPM for {stir_time}s")
|
self.logger.info(f"Stir completed: {stir_speed} RPM for {stir_time}s + settling {settling_time}s")
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def start_stir(self, vessel: str, stir_speed: float, purpose: str) -> bool:
|
async def start_stir(self, vessel: str, stir_speed: float, purpose: str) -> bool:
|
||||||
"""Start stir action - matches StartStir action exactly"""
|
"""Start stir action - 开始持续搅拌"""
|
||||||
self.logger.info(f"StartStir: vessel={vessel}, speed={stir_speed} RPM, purpose={purpose}")
|
self.logger.info(f"StartStir: vessel={vessel}, speed={stir_speed} RPM, purpose={purpose}")
|
||||||
|
|
||||||
# 验证参数
|
# 验证参数
|
||||||
if stir_speed > self._max_speed:
|
if stir_speed > self._max_speed or stir_speed < self._min_speed:
|
||||||
self.logger.error(f"Stir speed {stir_speed} exceeds maximum {self._max_speed}")
|
error_msg = f"搅拌速度 {stir_speed} RPM 超出范围 ({self._min_speed} - {self._max_speed} RPM)"
|
||||||
self.data["status"] = f"搅拌速度 {stir_speed} 超出范围"
|
self.logger.error(error_msg)
|
||||||
|
self.data.update({
|
||||||
|
"status": f"Error: {error_msg}",
|
||||||
|
"operation_mode": "Error"
|
||||||
|
})
|
||||||
return False
|
return False
|
||||||
|
|
||||||
self.data["status"] = f"开始搅拌: {vessel} at {stir_speed} RPM"
|
self.data.update({
|
||||||
|
"status": f"启动: 持续搅拌 {vessel} at {stir_speed} RPM | {purpose}",
|
||||||
|
"operation_mode": "Stirring",
|
||||||
|
"current_vessel": vessel,
|
||||||
|
"current_speed": stir_speed,
|
||||||
|
"is_stirring": True,
|
||||||
|
"remaining_time": -1.0, # -1 表示持续运行
|
||||||
|
})
|
||||||
|
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def stop_stir(self, vessel: str) -> bool:
|
async def stop_stir(self, vessel: str) -> bool:
|
||||||
"""Stop stir action - matches StopStir action exactly"""
|
"""Stop stir action - 停止搅拌"""
|
||||||
self.logger.info(f"StopStir: vessel={vessel}")
|
self.logger.info(f"StopStir: vessel={vessel}")
|
||||||
|
|
||||||
self.data["status"] = f"停止搅拌: {vessel}"
|
current_speed = self.data.get("current_speed", 0.0)
|
||||||
|
|
||||||
|
self.data.update({
|
||||||
|
"status": f"已停止: {vessel} 搅拌停止 | 之前速度: {current_speed} RPM",
|
||||||
|
"operation_mode": "Stopped",
|
||||||
|
"current_vessel": "",
|
||||||
|
"current_speed": 0.0,
|
||||||
|
"is_stirring": False,
|
||||||
|
"remaining_time": 0.0,
|
||||||
|
})
|
||||||
|
|
||||||
return True
|
return True
|
||||||
|
|
||||||
# 状态属性 - 只保留 action 中定义的 feedback
|
# 状态属性
|
||||||
@property
|
@property
|
||||||
def status(self) -> str:
|
def status(self) -> str:
|
||||||
return self.data.get("status", "Idle")
|
return self.data.get("status", "Idle")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def operation_mode(self) -> str:
|
||||||
|
return self.data.get("operation_mode", "Idle")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_vessel(self) -> str:
|
||||||
|
return self.data.get("current_vessel", "")
|
||||||
|
|
||||||
|
@property
|
||||||
|
def current_speed(self) -> float:
|
||||||
|
return self.data.get("current_speed", 0.0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def is_stirring(self) -> bool:
|
||||||
|
return self.data.get("is_stirring", False)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def remaining_time(self) -> float:
|
||||||
|
return self.data.get("remaining_time", 0.0)
|
||||||
@@ -1,149 +1,328 @@
|
|||||||
import asyncio
|
import asyncio
|
||||||
|
import time
|
||||||
|
from enum import Enum
|
||||||
|
from typing import Union, Optional
|
||||||
import logging
|
import logging
|
||||||
from typing import Dict, Any, Optional
|
|
||||||
|
|
||||||
|
class VirtualPumpMode(Enum):
|
||||||
|
Normal = 0
|
||||||
|
AccuratePos = 1
|
||||||
|
AccuratePosVel = 2
|
||||||
|
|
||||||
|
|
||||||
class VirtualTransferPump:
|
class VirtualTransferPump:
|
||||||
"""Virtual pump device specifically for Transfer protocol"""
|
"""虚拟转移泵类 - 模拟泵的基本功能，无需实际硬件"""
|
||||||
|
|
||||||
def __init__(self, device_id: str = None, config: Dict[str, Any] = None, **kwargs):
|
def __init__(self, device_id: str = None, config: dict = None, **kwargs):
|
||||||
# 处理可能的不同调用方式
|
"""
|
||||||
if device_id is None and 'id' in kwargs:
|
初始化虚拟转移泵
|
||||||
device_id = kwargs.pop('id')
|
|
||||||
if config is None and 'config' in kwargs:
|
|
||||||
config = kwargs.pop('config')
|
|
||||||
|
|
||||||
# 设置默认值
|
Args:
|
||||||
self.device_id = device_id or "unknown_transfer_pump"
|
device_id: 设备ID
|
||||||
self.config = config or {}
|
config: 配置字典，包含max_volume, port等参数
|
||||||
|
**kwargs: 其他参数，确保兼容性
|
||||||
|
"""
|
||||||
|
self.device_id = device_id or "virtual_transfer_pump"
|
||||||
|
|
||||||
|
# 从config或kwargs中获取参数，确保类型正确
|
||||||
|
if config:
|
||||||
|
self.max_volume = float(config.get('max_volume', 25.0))
|
||||||
|
self.port = config.get('port', 'VIRTUAL')
|
||||||
|
else:
|
||||||
|
self.max_volume = float(kwargs.get('max_volume', 25.0))
|
||||||
|
self.port = kwargs.get('port', 'VIRTUAL')
|
||||||
|
|
||||||
|
self._transfer_rate = float(kwargs.get('transfer_rate', 0))
|
||||||
|
self.mode = kwargs.get('mode', VirtualPumpMode.Normal)
|
||||||
|
|
||||||
|
# 状态变量 - 确保都是正确类型
|
||||||
|
self._status = "Idle"
|
||||||
|
self._position = 0.0 # float
|
||||||
|
self._max_velocity = 5.0 # float
|
||||||
|
self._current_volume = 0.0 # float
|
||||||
|
|
||||||
self.logger = logging.getLogger(f"VirtualTransferPump.{self.device_id}")
|
self.logger = logging.getLogger(f"VirtualTransferPump.{self.device_id}")
|
||||||
self.data = {}
|
|
||||||
|
|
||||||
# 添加调试信息
|
|
||||||
print(f"=== VirtualTransferPump {self.device_id} is being created! ===")
|
|
||||||
print(f"=== Config: {self.config} ===")
|
|
||||||
print(f"=== Kwargs: {kwargs} ===")
|
|
||||||
|
|
||||||
# 从config或kwargs中获取配置参数
|
|
||||||
self.port = self.config.get('port') or kwargs.get('port', 'VIRTUAL')
|
|
||||||
self._max_volume = self.config.get('max_volume') or kwargs.get('max_volume', 50.0)
|
|
||||||
self._transfer_rate = self.config.get('transfer_rate') or kwargs.get('transfer_rate', 5.0)
|
|
||||||
self._current_volume = 0.0
|
|
||||||
self.is_running = False
|
|
||||||
|
|
||||||
async def initialize(self) -> bool:
|
async def initialize(self) -> bool:
|
||||||
"""Initialize virtual transfer pump"""
|
"""初始化虚拟泵"""
|
||||||
print(f"=== VirtualTransferPump {self.device_id} initialize() called! ===")
|
self.logger.info(f"Initializing virtual pump {self.device_id}")
|
||||||
self.logger.info(f"Initializing virtual transfer pump {self.device_id}")
|
self._status = "Idle"
|
||||||
self.data.update({
|
self._position = 0.0
|
||||||
"status": "Idle",
|
self._current_volume = 0.0
|
||||||
"current_volume": 0.0,
|
|
||||||
"max_volume": self._max_volume,
|
|
||||||
"transfer_rate": self._transfer_rate,
|
|
||||||
"from_vessel": "",
|
|
||||||
"to_vessel": "",
|
|
||||||
"progress": 0.0,
|
|
||||||
"transferred_volume": 0.0,
|
|
||||||
"current_status": "Ready"
|
|
||||||
})
|
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def cleanup(self) -> bool:
|
async def cleanup(self) -> bool:
|
||||||
"""Cleanup virtual transfer pump"""
|
"""清理虚拟泵"""
|
||||||
self.logger.info(f"Cleaning up virtual transfer pump {self.device_id}")
|
self.logger.info(f"Cleaning up virtual pump {self.device_id}")
|
||||||
|
self._status = "Idle"
|
||||||
return True
|
return True
|
||||||
|
|
||||||
async def transfer(self, from_vessel: str, to_vessel: str, volume: float,
|
# 基本属性
|
||||||
amount: str = "", time: float = 0, viscous: bool = False,
|
|
||||||
rinsing_solvent: str = "", rinsing_volume: float = 0.0,
|
|
||||||
rinsing_repeats: int = 0, solid: bool = False) -> bool:
|
|
||||||
"""Execute liquid transfer - matches Transfer action"""
|
|
||||||
self.logger.info(f"Transfer: {volume}mL from {from_vessel} to {to_vessel}")
|
|
||||||
|
|
||||||
# 计算转移时间
|
|
||||||
if time > 0:
|
|
||||||
transfer_time = time
|
|
||||||
else:
|
|
||||||
# 如果是粘性液体，降低转移速率
|
|
||||||
rate = self._transfer_rate * 0.5 if viscous else self._transfer_rate
|
|
||||||
transfer_time = volume / rate
|
|
||||||
|
|
||||||
self.data.update({
|
|
||||||
"status": "Running",
|
|
||||||
"from_vessel": from_vessel,
|
|
||||||
"to_vessel": to_vessel,
|
|
||||||
"current_status": "Transferring",
|
|
||||||
"progress": 0.0,
|
|
||||||
"transferred_volume": 0.0
|
|
||||||
})
|
|
||||||
|
|
||||||
# 模拟转移过程
|
|
||||||
steps = 10
|
|
||||||
step_time = transfer_time / steps
|
|
||||||
step_volume = volume / steps
|
|
||||||
|
|
||||||
for i in range(steps):
|
|
||||||
await asyncio.sleep(step_time)
|
|
||||||
progress = (i + 1) / steps * 100
|
|
||||||
transferred = (i + 1) * step_volume
|
|
||||||
|
|
||||||
self.data.update({
|
|
||||||
"progress": progress,
|
|
||||||
"transferred_volume": transferred,
|
|
||||||
"current_status": f"Transferring {progress:.1f}%"
|
|
||||||
})
|
|
||||||
|
|
||||||
self.logger.info(f"Transfer progress: {progress:.1f}% ({transferred:.1f}/{volume}mL)")
|
|
||||||
|
|
||||||
# 如果需要冲洗
|
|
||||||
if rinsing_solvent and rinsing_volume > 0 and rinsing_repeats > 0:
|
|
||||||
self.data["current_status"] = "Rinsing"
|
|
||||||
for repeat in range(rinsing_repeats):
|
|
||||||
self.logger.info(f"Rinsing cycle {repeat + 1}/{rinsing_repeats} with {rinsing_solvent}")
|
|
||||||
await asyncio.sleep(1) # 模拟冲洗时间
|
|
||||||
|
|
||||||
self.data.update({
|
|
||||||
"status": "Idle",
|
|
||||||
"current_status": "Transfer completed",
|
|
||||||
"progress": 100.0,
|
|
||||||
"transferred_volume": volume
|
|
||||||
})
|
|
||||||
|
|
||||||
return True
|
|
||||||
|
|
||||||
# 添加所有在virtual_device.yaml中定义的状态属性
|
|
||||||
@property
|
@property
|
||||||
def status(self) -> str:
|
def status(self) -> str:
|
||||||
return self.data.get("status", "Unknown")
|
return self._status
|
||||||
|
|
||||||
|
@property
|
||||||
|
def position(self) -> float:
|
||||||
|
"""当前柱塞位置 (ml)"""
|
||||||
|
return self._position
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def current_volume(self) -> float:
|
def current_volume(self) -> float:
|
||||||
return self.data.get("current_volume", 0.0)
|
"""当前注射器中的体积 (ml)"""
|
||||||
|
return self._current_volume
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def max_volume(self) -> float:
|
def max_velocity(self) -> float:
|
||||||
return self.data.get("max_volume", self._max_volume)
|
return self._max_velocity
|
||||||
|
|
||||||
@property
|
@property
|
||||||
def transfer_rate(self) -> float:
|
def transfer_rate(self) -> float:
|
||||||
return self.data.get("transfer_rate", self._transfer_rate)
|
return self._transfer_rate
|
||||||
|
|
||||||
|
def set_max_velocity(self, velocity: float):
|
||||||
|
"""设置最大速度 (ml/s)"""
|
||||||
|
self._max_velocity = max(0.1, min(50.0, velocity)) # 限制在合理范围内
|
||||||
|
self.logger.info(f"Set max velocity to {self._max_velocity} ml/s")
|
||||||
|
|
||||||
@property
|
def get_status(self) -> str:
|
||||||
def from_vessel(self) -> str:
|
"""获取泵状态"""
|
||||||
return self.data.get("from_vessel", "")
|
return self._status
|
||||||
|
|
||||||
@property
|
async def _simulate_operation(self, duration: float):
|
||||||
def to_vessel(self) -> str:
|
"""模拟操作延时"""
|
||||||
return self.data.get("to_vessel", "")
|
self._status = "Busy"
|
||||||
|
await asyncio.sleep(duration)
|
||||||
|
self._status = "Idle"
|
||||||
|
|
||||||
@property
|
def _calculate_duration(self, volume: float, velocity: float = None) -> float:
|
||||||
def progress(self) -> float:
|
"""计算操作持续时间"""
|
||||||
return self.data.get("progress", 0.0)
|
if velocity is None:
|
||||||
|
velocity = self._max_velocity
|
||||||
|
return abs(volume) / velocity
|
||||||
|
|
||||||
@property
|
# 新的set_position方法 - 专门用于SetPumpPosition动作
|
||||||
def transferred_volume(self) -> float:
|
async def set_position(self, position: float, max_velocity: float = None):
|
||||||
return self.data.get("transferred_volume", 0.0)
|
"""
|
||||||
|
移动到绝对位置 - 专门用于SetPumpPosition动作
|
||||||
|
|
||||||
|
Args:
|
||||||
|
position (float): 目标位置 (ml)
|
||||||
|
max_velocity (float): 移动速度 (ml/s)
|
||||||
|
|
||||||
|
Returns:
|
||||||
|
dict: 符合SetPumpPosition.action定义的结果
|
||||||
|
"""
|
||||||
|
try:
|
||||||
|
# 验证并转换参数
|
||||||
|
target_position = float(position)
|
||||||
|
velocity = float(max_velocity) if max_velocity is not None else self._max_velocity
|
||||||
|
|
||||||
|
# 限制位置在有效范围内
|
||||||
|
target_position = max(0.0, min(float(self.max_volume), target_position))
|
||||||
|
|
||||||
|
# 计算移动距离和时间
|
||||||
|
volume_to_move = abs(target_position - self._position)
|
||||||
|
duration = self._calculate_duration(volume_to_move, velocity)
|
||||||
|
|
||||||
|
self.logger.info(f"SET_POSITION: Moving to {target_position} ml (current: {self._position} ml), velocity: {velocity} ml/s")
|
||||||
|
|
||||||
|
# 模拟移动过程
|
||||||
|
start_position = self._position
|
||||||
|
steps = 10 if duration > 0.1 else 1 # 如果移动距离很小，只用1步
|
||||||
|
step_duration = duration / steps if steps > 1 else duration
|
||||||
|
|
||||||
|
for i in range(steps + 1):
|
||||||
|
# 计算当前位置和进度
|
||||||
|
progress = (i / steps) * 100 if steps > 0 else 100
|
||||||
|
current_pos = start_position + (target_position - start_position) * (i / steps) if steps > 0 else target_position
|
||||||
|
|
||||||
|
# 更新状态
|
||||||
|
self._status = "Moving" if i < steps else "Idle"
|
||||||
|
self._position = current_pos
|
||||||
|
self._current_volume = current_pos
|
||||||
|
|
||||||
|
# 等待一小步时间
|
||||||
|
if i < steps and step_duration > 0:
|
||||||
|
await asyncio.sleep(step_duration)
|
||||||
|
|
||||||
|
# 确保最终位置准确
|
||||||
|
self._position = target_position
|
||||||
|
self._current_volume = target_position
|
||||||
|
self._status = "Idle"
|
||||||
|
|
||||||
|
self.logger.info(f"SET_POSITION: Reached position {self._position} ml, current volume: {self._current_volume} ml")
|
||||||
|
|
||||||
|
# 返回符合action定义的结果
|
||||||
|
return {
|
||||||
|
"success": True,
|
||||||
|
"message": f"Successfully moved to position {self._position} ml"
|
||||||
|
}
|
||||||
|
|
||||||
|
except Exception as e:
|
||||||
|
error_msg = f"Failed to set position: {str(e)}"
|
||||||
|
self.logger.error(error_msg)
|
||||||
|
return {
|
||||||
|
"success": False,
|
||||||
|
"message": error_msg
|
||||||
|
}
|
||||||
|
|
||||||
@property
|
# 其他泵操作方法
|
||||||
def current_status(self) -> str:
|
async def pull_plunger(self, volume: float, velocity: float = None):
|
||||||
return self.data.get("current_status", "Ready")
|
"""
|
||||||
|
拉取柱塞（吸液）
|
||||||
|
|
||||||
|
Args:
|
||||||
|
volume (float): 要拉取的体积 (ml)
|
||||||
|
velocity (float): 拉取速度 (ml/s)
|
||||||
|
"""
|
||||||
|
new_position = min(self.max_volume, self._position + volume)
|
||||||
|
actual_volume = new_position - self._position
|
||||||
|
|
||||||
|
if actual_volume <= 0:
|
||||||
|
self.logger.warning("Cannot pull - already at maximum volume")
|
||||||
|
return
|
||||||
|
|
||||||
|
duration = self._calculate_duration(actual_volume, velocity)
|
||||||
|
|
||||||
|
self.logger.info(f"Pulling {actual_volume} ml (from {self._position} to {new_position})")
|
||||||
|
|
||||||
|
await self._simulate_operation(duration)
|
||||||
|
|
||||||
|
self._position = new_position
|
||||||
|
self._current_volume = new_position
|
||||||
|
|
||||||
|
self.logger.info(f"Pulled {actual_volume} ml, current volume: {self._current_volume} ml")
|
||||||
|
|
||||||
|
async def push_plunger(self, volume: float, velocity: float = None):
|
||||||
|
"""
|
||||||
|
推出柱塞（排液）
|
||||||
|
|
||||||
|
Args:
|
||||||
|
volume (float): 要推出的体积 (ml)
|
||||||
|
velocity (float): 推出速度 (ml/s)
|
||||||
|
"""
|
||||||
|
new_position = max(0, self._position - volume)
|
||||||
|
actual_volume = self._position - new_position
|
||||||
|
|
||||||
|
if actual_volume <= 0:
|
||||||
|
self.logger.warning("Cannot push - already at minimum volume")
|
||||||
|
return
|
||||||
|
|
||||||
|
duration = self._calculate_duration(actual_volume, velocity)
|
||||||
|
|
||||||
|
self.logger.info(f"Pushing {actual_volume} ml (from {self._position} to {new_position})")
|
||||||
|
|
||||||
|
await self._simulate_operation(duration)
|
||||||
|
|
||||||
|
self._position = new_position
|
||||||
|
self._current_volume = new_position
|
||||||
|
|
||||||
|
self.logger.info(f"Pushed {actual_volume} ml, current volume: {self._current_volume} ml")
|
||||||
|
|
||||||
|
# 便捷操作方法
|
||||||
|
async def aspirate(self, volume: float, velocity: float = None):
|
||||||
|
"""吸液操作"""
|
||||||
|
await self.pull_plunger(volume, velocity)
|
||||||
|
|
||||||
|
async def dispense(self, volume: float, velocity: float = None):
|
||||||
|
"""排液操作"""
|
||||||
|
await self.push_plunger(volume, velocity)
|
||||||
|
|
||||||
|
async def transfer(self, volume: float, aspirate_velocity: float = None, dispense_velocity: float = None):
|
||||||
|
"""转移操作（先吸后排）"""
|
||||||
|
# 吸液
|
||||||
|
await self.aspirate(volume, aspirate_velocity)
|
||||||
|
|
||||||
|
# 短暂停顿
|
||||||
|
await asyncio.sleep(0.1)
|
||||||
|
|
||||||
|
# 排液
|
||||||
|
await self.dispense(volume, dispense_velocity)
|
||||||
|
|
||||||
|
async def empty_syringe(self, velocity: float = None):
|
||||||
|
"""清空注射器"""
|
||||||
|
await self.set_position(0, velocity)
|
||||||
|
|
||||||
|
async def fill_syringe(self, velocity: float = None):
|
||||||
|
"""充满注射器"""
|
||||||
|
await self.set_position(self.max_volume, velocity)
|
||||||
|
|
||||||
|
async def stop_operation(self):
|
||||||
|
"""停止当前操作"""
|
||||||
|
self._status = "Idle"
|
||||||
|
self.logger.info("Operation stopped")
|
||||||
|
|
||||||
|
# 状态查询方法
|
||||||
|
def get_position(self) -> float:
|
||||||
|
"""获取当前位置"""
|
||||||
|
return self._position
|
||||||
|
|
||||||
|
def get_current_volume(self) -> float:
|
||||||
|
"""获取当前体积"""
|
||||||
|
return self._current_volume
|
||||||
|
|
||||||
|
def get_remaining_capacity(self) -> float:
|
||||||
|
"""获取剩余容量"""
|
||||||
|
return self.max_volume - self._current_volume
|
||||||
|
|
||||||
|
def is_empty(self) -> bool:
|
||||||
|
"""检查是否为空"""
|
||||||
|
return self._current_volume <= 0.01 # 允许小量误差
|
||||||
|
|
||||||
|
def is_full(self) -> bool:
|
||||||
|
"""检查是否已满"""
|
||||||
|
return self._current_volume >= (self.max_volume - 0.01) # 允许小量误差
|
||||||
|
|
||||||
|
# 调试和状态信息
|
||||||
|
def get_pump_info(self) -> dict:
|
||||||
|
"""获取泵的详细信息"""
|
||||||
|
return {
|
||||||
|
"device_id": self.device_id,
|
||||||
|
"status": self._status,
|
||||||
|
"position": self._position,
|
||||||
|
"current_volume": self._current_volume,
|
||||||
|
"max_volume": self.max_volume,
|
||||||
|
"max_velocity": self._max_velocity,
|
||||||
|
"mode": self.mode.name,
|
||||||
|
"is_empty": self.is_empty(),
|
||||||
|
"is_full": self.is_full(),
|
||||||
|
"remaining_capacity": self.get_remaining_capacity()
|
||||||
|
}
|
||||||
|
|
||||||
|
def __str__(self):
|
||||||
|
return f"VirtualTransferPump({self.device_id}: {self._current_volume:.2f}/{self.max_volume} ml, {self._status})"
|
||||||
|
|
||||||
|
def __repr__(self):
|
||||||
|
return self.__str__()
|
||||||
|
|
||||||
|
|
||||||
|
# 使用示例
|
||||||
|
async def demo():
|
||||||
|
"""虚拟泵使用示例"""
|
||||||
|
pump = VirtualTransferPump("demo_pump", {"max_volume": 50.0})
|
||||||
|
|
||||||
|
await pump.initialize()
|
||||||
|
|
||||||
|
print(f"Initial state: {pump}")
|
||||||
|
|
||||||
|
# 测试set_position方法
|
||||||
|
result = await pump.set_position(10.0, max_velocity=2.0)
|
||||||
|
print(f"Set position result: {result}")
|
||||||
|
print(f"After setting position to 10ml: {pump}")
|
||||||
|
|
||||||
|
# 吸液测试
|
||||||
|
await pump.aspirate(5.0, velocity=2.0)
|
||||||
|
print(f"After aspirating 5ml: {pump}")
|
||||||
|
|
||||||
|
# 清空测试
|
||||||
|
result = await pump.set_position(0.0)
|
||||||
|
print(f"Empty result: {result}")
|
||||||
|
print(f"After emptying: {pump}")
|
||||||
|
|
||||||
|
print("\nPump info:", pump.get_pump_info())
|
||||||
|
|
||||||
|
|
||||||
|
if __name__ == "__main__":
|
||||||
|
asyncio.run(demo())
|
||||||
|
|||||||
47
unilabos/devices/virtual/virtual_vacuum_pump.py
Normal file
47
unilabos/devices/virtual/virtual_vacuum_pump.py
Normal file
@@ -0,0 +1,47 @@
|
|||||||
|
import asyncio
|
||||||
|
import time
|
||||||
|
from typing import Dict, Any, Optional
|
||||||
|
|
||||||
|
|
||||||
|
class VirtualVacuumPump:
|
||||||
|
"""Virtual vacuum pump for testing"""
|
||||||
|
|
||||||
|
def __init__(self, device_id: Optional[str] = None, config: Optional[Dict[str, Any]] = None, **kwargs):
|
||||||
|
self.device_id = device_id or "unknown_vacuum_pump"
|
||||||
|
self.config = config or {}
|
||||||
|
self.data = {}
|
||||||
|
self._status = "OPEN"
|
||||||
|
|
||||||
|
async def initialize(self) -> bool:
|
||||||
|
"""Initialize virtual vacuum pump"""
|
||||||
|
self.data.update({
|
||||||
|
"status": self._status
|
||||||
|
})
|
||||||
|
return True
|
||||||
|
|
||||||
|
async def cleanup(self) -> bool:
|
||||||
|
"""Cleanup virtual vacuum pump"""
|
||||||
|
return True
|
||||||
|
|
||||||
|
@property
|
||||||
|
def status(self) -> str:
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
def get_status(self) -> str:
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
def set_status(self, string):
|
||||||
|
self._status = string
|
||||||
|
time.sleep(5)
|
||||||
|
|
||||||
|
def open(self):
|
||||||
|
self._status = "OPEN"
|
||||||
|
|
||||||
|
def close(self):
|
||||||
|
self._status = "CLOSED"
|
||||||
|
|
||||||
|
def is_open(self):
|
||||||
|
return self._status
|
||||||
|
|
||||||
|
def is_closed(self):
|
||||||
|
return not self._status
|
||||||
@@ -33,19 +33,19 @@ class CleanProtocol(BaseModel):
|
|||||||
|
|
||||||
|
|
||||||
class SeparateProtocol(BaseModel):
|
class SeparateProtocol(BaseModel):
|
||||||
purpose: str # 'wash' or 'extract'. 'wash' means that product phase will not be the added solvent phase, 'extract' means product phase will be the added solvent phase. If no solvent is added just use 'extract'.
|
purpose: str
|
||||||
product_phase: str # 'top' or 'bottom'. Phase that product will be in.
|
product_phase: str
|
||||||
from_vessel: str #Contents of from_vessel are transferred to separation_vessel and separation is performed.
|
from_vessel: str
|
||||||
separation_vessel: str # Vessel in which separation of phases will be carried out.
|
separation_vessel: str
|
||||||
to_vessel: str # Vessel to send product phase to.
|
to_vessel: str
|
||||||
waste_phase_to_vessel: str # Optional. Vessel to send waste phase to.
|
waste_phase_to_vessel: str
|
||||||
solvent: str # Optional. Solvent to add to separation vessel after contents of from_vessel has been transferred to create two phases.
|
solvent: str
|
||||||
solvent_volume: float # Optional. Volume of solvent to add.
|
solvent_volume: float
|
||||||
through: str # Optional. Solid chemical to send product phase through on way to to_vessel, e.g. 'celite'.
|
through: str
|
||||||
repeats: int # Optional. Number of separations to perform.
|
repeats: int
|
||||||
stir_time: float # Optional. Time stir for after adding solvent, before separation of phases.
|
stir_time: float
|
||||||
stir_speed: float # Optional. Speed to stir at after adding solvent, before separation of phases.
|
stir_speed: float
|
||||||
settling_time: float # Optional. Time
|
settling_time: float
|
||||||
|
|
||||||
|
|
||||||
class EvaporateProtocol(BaseModel):
|
class EvaporateProtocol(BaseModel):
|
||||||
@@ -67,6 +67,7 @@ class AGVTransferProtocol(BaseModel):
|
|||||||
to_repo: dict
|
to_repo: dict
|
||||||
from_repo_position: str
|
from_repo_position: str
|
||||||
to_repo_position: str
|
to_repo_position: str
|
||||||
|
|
||||||
#=============新添加的新的协议================
|
#=============新添加的新的协议================
|
||||||
class AddProtocol(BaseModel):
|
class AddProtocol(BaseModel):
|
||||||
vessel: str
|
vessel: str
|
||||||
@@ -84,16 +85,16 @@ class CentrifugeProtocol(BaseModel):
|
|||||||
vessel: str
|
vessel: str
|
||||||
speed: float
|
speed: float
|
||||||
time: float
|
time: float
|
||||||
temp: float # 移除默认值
|
temp: float
|
||||||
|
|
||||||
class FilterProtocol(BaseModel):
|
class FilterProtocol(BaseModel):
|
||||||
vessel: str
|
vessel: str
|
||||||
filtrate_vessel: str # 移除默认值
|
filtrate_vessel: str
|
||||||
stir: bool # 移除默认值
|
stir: bool
|
||||||
stir_speed: float # 移除默认值
|
stir_speed: float
|
||||||
temp: float # 移除默认值
|
temp: float
|
||||||
continue_heatchill: bool # 移除默认值
|
continue_heatchill: bool
|
||||||
volume: float # 移除默认值
|
volume: float
|
||||||
|
|
||||||
class HeatChillProtocol(BaseModel):
|
class HeatChillProtocol(BaseModel):
|
||||||
vessel: str
|
vessel: str
|
||||||
@@ -137,45 +138,53 @@ class TransferProtocol(BaseModel):
|
|||||||
solid: bool = False
|
solid: bool = False
|
||||||
|
|
||||||
class CleanVesselProtocol(BaseModel):
|
class CleanVesselProtocol(BaseModel):
|
||||||
vessel: str # 要清洗的容器名称
|
vessel: str
|
||||||
solvent: str # 用于清洗容器的溶剂名称
|
solvent: str
|
||||||
volume: float # 清洗溶剂的体积，可选参数
|
volume: float
|
||||||
temp: float # 清洗时的温度，可选参数
|
temp: float
|
||||||
repeats: int = 1 # 清洗操作的重复次数，默认为 1
|
repeats: int = 1
|
||||||
|
|
||||||
class DissolveProtocol(BaseModel):
|
class DissolveProtocol(BaseModel):
|
||||||
vessel: str # 装有要溶解物质的容器名称
|
vessel: str
|
||||||
solvent: str # 用于溶解物质的溶剂名称
|
solvent: str
|
||||||
volume: float # 溶剂的体积，可选参数
|
volume: float
|
||||||
amount: str = "" # 要溶解物质的量，可选参数
|
amount: str = ""
|
||||||
temp: float = 25.0 # 溶解时的温度，可选参数
|
temp: float = 25.0
|
||||||
time: float = 0.0 # 溶解的时间，可选参数
|
time: float = 0.0
|
||||||
stir_speed: float = 0.0 # 搅拌速度，可选参数
|
stir_speed: float = 0.0
|
||||||
|
|
||||||
class FilterThroughProtocol(BaseModel):
|
class FilterThroughProtocol(BaseModel):
|
||||||
from_vessel: str # 源容器的名称，即物质起始所在的容器
|
from_vessel: str
|
||||||
to_vessel: str # 目标容器的名称，物质过滤后要到达的容器
|
to_vessel: str
|
||||||
filter_through: str # 过滤时所通过的介质，如滤纸、柱子等
|
filter_through: str
|
||||||
eluting_solvent: str = "" # 洗脱溶剂的名称，可选参数
|
eluting_solvent: str = ""
|
||||||
eluting_volume: float = 0.0 # 洗脱溶剂的体积，可选参数
|
eluting_volume: float = 0.0
|
||||||
eluting_repeats: int = 0 # 洗脱操作的重复次数，默认为 0
|
eluting_repeats: int = 0
|
||||||
residence_time: float = 0.0 # 物质在过滤介质中的停留时间，可选参数
|
residence_time: float = 0.0
|
||||||
|
|
||||||
class RunColumnProtocol(BaseModel):
|
class RunColumnProtocol(BaseModel):
|
||||||
from_vessel: str # 源容器的名称，即样品起始所在的容器
|
from_vessel: str
|
||||||
to_vessel: str # 目标容器的名称，分离后的样品要到达的容器
|
to_vessel: str
|
||||||
column: str # 所使用的柱子的名称
|
column: str
|
||||||
|
|
||||||
class WashSolidProtocol(BaseModel):
|
class WashSolidProtocol(BaseModel):
|
||||||
vessel: str # 装有固体物质的容器名称
|
vessel: str
|
||||||
solvent: str # 用于清洗固体的溶剂名称
|
solvent: str
|
||||||
volume: float # 清洗溶剂的体积
|
volume: float
|
||||||
filtrate_vessel: str = "" # 滤液要收集到的容器名称，可选参数
|
filtrate_vessel: str = ""
|
||||||
temp: float = 25.0 # 清洗时的温度，可选参数
|
temp: float = 25.0
|
||||||
stir: bool = False # 是否在清洗过程中搅拌，默认为 False
|
stir: bool = False
|
||||||
stir_speed: float = 0.0 # 搅拌速度，可选参数
|
stir_speed: float = 0.0
|
||||||
time: float = 0.0 # 清洗的时间，可选参数
|
time: float = 0.0
|
||||||
repeats: int = 1 # 清洗操作的重复次数，默认为 1
|
repeats: int = 1
|
||||||
|
|
||||||
__all__ = ["Point3D", "PumpTransferProtocol", "CleanProtocol", "SeparateProtocol", "EvaporateProtocol", "EvacuateAndRefillProtocol", "AGVTransferProtocol", "CentrifugeProtocol", "AddProtocol", "FilterProtocol", "HeatChillProtocol", "HeatChillStartProtocol", "HeatChillStopProtocol", "StirProtocol", "StartStirProtocol", "StopStirProtocol", "TransferProtocol", "CleanVesselProtocol", "DissolveProtocol", "FilterThroughProtocol", "RunColumnProtocol", "WashSolidProtocol"]
|
__all__ = [
|
||||||
|
"Point3D", "PumpTransferProtocol", "CleanProtocol", "SeparateProtocol",
|
||||||
|
"EvaporateProtocol", "EvacuateAndRefillProtocol", "AGVTransferProtocol",
|
||||||
|
"CentrifugeProtocol", "AddProtocol", "FilterProtocol",
|
||||||
|
"HeatChillProtocol", "HeatChillStartProtocol", "HeatChillStopProtocol",
|
||||||
|
"StirProtocol", "StartStirProtocol", "StopStirProtocol",
|
||||||
|
"TransferProtocol", "CleanVesselProtocol", "DissolveProtocol",
|
||||||
|
"FilterThroughProtocol", "RunColumnProtocol", "WashSolidProtocol"
|
||||||
|
]
|
||||||
# End Protocols
|
# End Protocols
|
||||||
|
|||||||
@@ -89,7 +89,7 @@ mock_filter:
|
|||||||
target_volume: Float64
|
target_volume: Float64
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
filter:
|
filter:
|
||||||
type: ProtocolFilter
|
type: Filter
|
||||||
goal:
|
goal:
|
||||||
vessel: vessel
|
vessel: vessel
|
||||||
filtrate_vessel: filtrate_vessel
|
filtrate_vessel: filtrate_vessel
|
||||||
@@ -737,7 +737,7 @@ mock_stirrer_new:
|
|||||||
max_stir_speed: Float64
|
max_stir_speed: Float64
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
start_stir:
|
start_stir:
|
||||||
type: ProtocolStartStir
|
type: StartStir
|
||||||
goal:
|
goal:
|
||||||
vessel: vessel
|
vessel: vessel
|
||||||
stir_speed: stir_speed
|
stir_speed: stir_speed
|
||||||
@@ -760,7 +760,7 @@ mock_stirrer_new:
|
|||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
stop_stir:
|
stop_stir:
|
||||||
type: ProtocolStopStir
|
type: StopStir
|
||||||
goal:
|
goal:
|
||||||
vessel: vessel
|
vessel: vessel
|
||||||
feedback:
|
feedback:
|
||||||
|
|||||||
@@ -48,14 +48,16 @@ solenoid_valve.mock:
|
|||||||
feedback: {}
|
feedback: {}
|
||||||
result: {}
|
result: {}
|
||||||
handles:
|
handles:
|
||||||
input:
|
- handler_key: in
|
||||||
- handler_key: fluid-input
|
label: in
|
||||||
label: Fluid Input
|
io_type: target
|
||||||
data_type: fluid
|
data_type: fluid
|
||||||
output:
|
side: NORTH
|
||||||
- handler_key: fluid-output
|
- handler_key: out
|
||||||
label: Fluid Output
|
label: out
|
||||||
|
io_type: source
|
||||||
data_type: fluid
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
init_param_schema:
|
init_param_schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
|
|||||||
@@ -23,20 +23,12 @@ vacuum_pump.mock:
|
|||||||
feedback: {}
|
feedback: {}
|
||||||
result: {}
|
result: {}
|
||||||
handles:
|
handles:
|
||||||
input:
|
- handler_key: out
|
||||||
- handler_key: fluid-input
|
label: out
|
||||||
label: Fluid Input
|
|
||||||
data_type: fluid
|
|
||||||
io_type: target
|
|
||||||
data_source: handle
|
|
||||||
data_key: fluid_in
|
|
||||||
output:
|
|
||||||
- handler_key: fluid-output
|
|
||||||
label: Fluid Output
|
|
||||||
data_type: fluid
|
data_type: fluid
|
||||||
io_type: source
|
io_type: source
|
||||||
data_source: executor
|
data_source: handle
|
||||||
data_key: fluid_out
|
data_key: fluid_in
|
||||||
init_param_schema:
|
init_param_schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
@@ -72,16 +64,8 @@ gas_source.mock:
|
|||||||
feedback: {}
|
feedback: {}
|
||||||
result: {}
|
result: {}
|
||||||
handles:
|
handles:
|
||||||
input:
|
- handler_key: out
|
||||||
- handler_key: fluid-input
|
label: out
|
||||||
label: Fluid Input
|
|
||||||
data_type: fluid
|
|
||||||
io_type: target
|
|
||||||
data_source: handle
|
|
||||||
data_key: fluid_in
|
|
||||||
output:
|
|
||||||
- handler_key: fluid-output
|
|
||||||
label: Fluid Output
|
|
||||||
data_type: fluid
|
data_type: fluid
|
||||||
io_type: source
|
io_type: source
|
||||||
data_source: executor
|
data_source: executor
|
||||||
|
|||||||
@@ -1,3 +1,70 @@
|
|||||||
|
# 虚拟设备清单及连接特性
|
||||||
|
|
||||||
|
# 1. virtual_pump - 虚拟泵
|
||||||
|
# 描述：具有多通道阀门特性的泵，根据valve_position可连接多个容器
|
||||||
|
# 连接特性：1个输入口 + 1个输出口
|
||||||
|
# 数据类型：fluid（流体连接）
|
||||||
|
|
||||||
|
# 2. virtual_stirrer - 虚拟搅拌器
|
||||||
|
# 描述：机械连接设备，提供搅拌功能
|
||||||
|
# 连接特性：1个连接点
|
||||||
|
# 数据类型：mechanical（机械连接）
|
||||||
|
|
||||||
|
# 3a. virtual_valve - 虚拟八通阀门
|
||||||
|
# 描述：8通阀门，可切换流向
|
||||||
|
# 连接特性：1个口连接注射泵 + 多个输出口
|
||||||
|
# 数据类型：fluid（流体连接）
|
||||||
|
|
||||||
|
# 3b. virtual_solenoid_valve (电磁阀门)
|
||||||
|
# 描述：简单的开关型电磁阀，只有开启和关闭两个状态
|
||||||
|
# 连接特性：1个输入口 + 1个输出口，控制通断
|
||||||
|
# 数据类型：fluid（流体连接）
|
||||||
|
|
||||||
|
# 4. virtual_centrifuge - 虚拟离心机
|
||||||
|
# 描述：单个样品处理设备，原地处理样品
|
||||||
|
# 连接特性：1个输入口 + 1个输出口
|
||||||
|
# 数据类型：resource（资源/样品连接）
|
||||||
|
|
||||||
|
# 5. virtual_filter - 虚拟过滤器
|
||||||
|
# 描述：分离设备，将样品分离为滤液和滤渣
|
||||||
|
# 连接特性：1个输入口 + 2个输出口（滤液和滤渣）
|
||||||
|
# 数据类型：resource（资源/样品连接）
|
||||||
|
|
||||||
|
# 6. virtual_heatchill - 虚拟加热/冷却器
|
||||||
|
# 描述：温控设备，容器直接放置在设备上进行温度控制
|
||||||
|
# 连接特性：1个连接点
|
||||||
|
# 数据类型：mechanical（机械/物理接触连接）
|
||||||
|
|
||||||
|
# 7. virtual_transfer_pump - 虚拟转移泵（注射器式）
|
||||||
|
# 描述：注射器式转移泵，通过同一个口吸入和排出液体
|
||||||
|
# 连接特性：1个连接点
|
||||||
|
# 数据类型：fluid（流体连接）
|
||||||
|
|
||||||
|
# 8. virtual_column - 虚拟色谱柱
|
||||||
|
# 描述：分离纯化设备，用于样品纯化
|
||||||
|
# 连接特性：1个输入口 + 1个输出口
|
||||||
|
# 数据类型：resource（资源/样品连接）
|
||||||
|
|
||||||
|
# 9. virtual_rotavap - 虚拟旋转蒸发仪
|
||||||
|
# 描述：旋转蒸发仪用于溶剂蒸发和浓缩，具有加热、旋转和真空功能
|
||||||
|
# 连接特性：1个输入口（样品），1个输出口（浓缩物），1个冷凝器出口（回收溶剂）
|
||||||
|
# 数据类型：resource（资源/样品连接）
|
||||||
|
|
||||||
|
# 10. virtual_separator - 虚拟分液器
|
||||||
|
# 描述：分液器用于两相液体的分离，可进行萃取和洗涤操作
|
||||||
|
# 连接特性：1个输入口（混合液），2个输出口（上相和下相）
|
||||||
|
# 数据类型：fluid（流体连接）
|
||||||
|
|
||||||
|
# 11. virtual_vacuum_pump - 虚拟真空泵
|
||||||
|
# 描述：真空泵设备，用于抽真空操作和真空/充气循环
|
||||||
|
# 连接特性：1个输出口（连接需要抽真空的系统）
|
||||||
|
# 数据类型：fluid（流体连接）
|
||||||
|
|
||||||
|
# 12. virtual_gas_source - 虚拟气源
|
||||||
|
# 描述：气源设备，用于充气操作和真空/充气循环
|
||||||
|
# 连接特性：1个输出口（向系统提供加压气体）
|
||||||
|
# 数据类型：fluid（流体连接）
|
||||||
|
|
||||||
virtual_pump:
|
virtual_pump:
|
||||||
description: Virtual Pump for PumpTransferProtocol Testing
|
description: Virtual Pump for PumpTransferProtocol Testing
|
||||||
class:
|
class:
|
||||||
@@ -6,7 +73,7 @@ virtual_pump:
|
|||||||
status_types:
|
status_types:
|
||||||
status: String
|
status: String
|
||||||
position: Float64
|
position: Float64
|
||||||
valve_position: Int32 # 修复：使用 Int32 而不是 String
|
valve_position: Int32
|
||||||
max_volume: Float64
|
max_volume: Float64
|
||||||
current_volume: Float64
|
current_volume: Float64
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
@@ -30,11 +97,19 @@ virtual_pump:
|
|||||||
set_valve_position:
|
set_valve_position:
|
||||||
type: FloatSingleInput
|
type: FloatSingleInput
|
||||||
goal:
|
goal:
|
||||||
Int32: Int32
|
float_in: valve_position
|
||||||
feedback:
|
feedback:
|
||||||
status: status
|
status: status
|
||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
|
handles:
|
||||||
|
- handler_key: pumpio
|
||||||
|
label: pumpio
|
||||||
|
data_type: fluid
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_in
|
||||||
|
description: "泵的输出口"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
@@ -48,11 +123,17 @@ virtual_pump:
|
|||||||
|
|
||||||
virtual_stirrer:
|
virtual_stirrer:
|
||||||
description: Virtual Stirrer for StirProtocol Testing
|
description: Virtual Stirrer for StirProtocol Testing
|
||||||
|
icon: Stirrer.webp
|
||||||
class:
|
class:
|
||||||
module: unilabos.devices.virtual.virtual_stirrer:VirtualStirrer
|
module: unilabos.devices.virtual.virtual_stirrer:VirtualStirrer
|
||||||
type: python
|
type: python
|
||||||
status_types:
|
status_types:
|
||||||
status: String
|
status: String
|
||||||
|
operation_mode: String
|
||||||
|
current_vessel: String
|
||||||
|
current_speed: Float64
|
||||||
|
is_stirring: Bool
|
||||||
|
remaining_time: Float64
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
stir:
|
stir:
|
||||||
type: Stir
|
type: Stir
|
||||||
@@ -65,7 +146,7 @@ virtual_stirrer:
|
|||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
start_stir:
|
start_stir:
|
||||||
type: ProtocolStartStir
|
type: StartStir
|
||||||
goal:
|
goal:
|
||||||
vessel: vessel
|
vessel: vessel
|
||||||
stir_speed: stir_speed
|
stir_speed: stir_speed
|
||||||
@@ -75,31 +156,41 @@ virtual_stirrer:
|
|||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
stop_stir:
|
stop_stir:
|
||||||
type: ProtocolStopStir
|
type: StopStir
|
||||||
goal:
|
goal:
|
||||||
vessel: vessel
|
vessel: vessel
|
||||||
feedback:
|
feedback:
|
||||||
status: status
|
status: status
|
||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
|
handles:
|
||||||
|
- handler_key: stirrer
|
||||||
|
label: stirrer
|
||||||
|
data_type: mechanical
|
||||||
|
side: NORTH
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: vessel
|
||||||
|
description: "搅拌器的机械连接口"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
port:
|
port:
|
||||||
type: string
|
type: string
|
||||||
default: "VIRTUAL"
|
default: "VIRTUAL"
|
||||||
max_temp:
|
|
||||||
type: number
|
|
||||||
default: 100.0
|
|
||||||
max_speed:
|
max_speed:
|
||||||
type: number
|
type: number
|
||||||
default: 1000.0
|
default: 1500.0
|
||||||
|
min_speed:
|
||||||
|
type: number
|
||||||
|
default: 50.0
|
||||||
additionalProperties: false
|
additionalProperties: false
|
||||||
|
|
||||||
virtual_valve:
|
virtual_multiway_valve:
|
||||||
description: Virtual Valve for AddProtocol Testing
|
description: Virtual 8-Way Valve for flow direction control
|
||||||
|
icon: EightPipeline.webp
|
||||||
class:
|
class:
|
||||||
module: unilabos.devices.virtual.virtual_valve:VirtualValve
|
module: unilabos.devices.virtual.virtual_multiway_valve:VirtualMultiwayValve
|
||||||
type: python
|
type: python
|
||||||
status_types:
|
status_types:
|
||||||
status: String
|
status: String
|
||||||
@@ -111,22 +202,90 @@ virtual_valve:
|
|||||||
set_position:
|
set_position:
|
||||||
type: SendCmd
|
type: SendCmd
|
||||||
goal:
|
goal:
|
||||||
command: position
|
command: command
|
||||||
feedback: {}
|
feedback: {}
|
||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
open:
|
set_valve_position:
|
||||||
type: EmptyIn
|
type: SendCmd
|
||||||
goal: {}
|
goal:
|
||||||
feedback: {}
|
command: command
|
||||||
result:
|
|
||||||
success: success
|
|
||||||
close:
|
|
||||||
type: EmptyIn
|
|
||||||
goal: {}
|
|
||||||
feedback: {}
|
feedback: {}
|
||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
|
handles:
|
||||||
|
- handler_key: transferpump
|
||||||
|
label: transferpump
|
||||||
|
data_type: fluid
|
||||||
|
side: NORTH
|
||||||
|
io_type: target
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_in
|
||||||
|
description: "八通阀门进液口"
|
||||||
|
- handler_key: 1
|
||||||
|
label: 1
|
||||||
|
data_type: fluid
|
||||||
|
side: NORTH
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_1
|
||||||
|
description: "八通阀门端口1"
|
||||||
|
- handler_key: 2
|
||||||
|
label: 2
|
||||||
|
data_type: fluid
|
||||||
|
side: EAST
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_2
|
||||||
|
description: "八通阀门端口2"
|
||||||
|
- handler_key: 3
|
||||||
|
label: 3
|
||||||
|
data_type: fluid
|
||||||
|
side: EAST
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_3
|
||||||
|
description: "八通阀门端口3"
|
||||||
|
- handler_key: 4
|
||||||
|
label: 4
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_4
|
||||||
|
description: "八通阀门端口4"
|
||||||
|
- handler_key: 5
|
||||||
|
label: 5
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_5
|
||||||
|
description: "八通阀门端口5"
|
||||||
|
- handler_key: 6
|
||||||
|
label: 6
|
||||||
|
data_type: fluid
|
||||||
|
side: WEST
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_6
|
||||||
|
description: "八通阀门端口6"
|
||||||
|
- handler_key: 7
|
||||||
|
label: 7
|
||||||
|
data_type: fluid
|
||||||
|
side: WEST
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_7
|
||||||
|
description: "八通阀门端口7"
|
||||||
|
- handler_key: 8
|
||||||
|
label: 8
|
||||||
|
data_type: fluid
|
||||||
|
side: NORTH
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_port_8
|
||||||
|
description: "八通阀门端口8"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
@@ -135,7 +294,76 @@ virtual_valve:
|
|||||||
default: "VIRTUAL"
|
default: "VIRTUAL"
|
||||||
positions:
|
positions:
|
||||||
type: integer
|
type: integer
|
||||||
default: 6
|
default: 8
|
||||||
|
additionalProperties: false
|
||||||
|
|
||||||
|
virtual_solenoid_valve:
|
||||||
|
description: Virtual Solenoid Valve for simple on/off flow control
|
||||||
|
class:
|
||||||
|
module: unilabos.devices.virtual.virtual_solenoid_valve:VirtualSolenoidValve
|
||||||
|
type: python
|
||||||
|
status_types:
|
||||||
|
status: String
|
||||||
|
valve_state: String
|
||||||
|
is_open: Bool
|
||||||
|
action_value_mappings:
|
||||||
|
set_valve_position:
|
||||||
|
type: SendCmd
|
||||||
|
goal:
|
||||||
|
command: command
|
||||||
|
feedback: {}
|
||||||
|
result:
|
||||||
|
success: success
|
||||||
|
open:
|
||||||
|
type: SendCmd
|
||||||
|
goal:
|
||||||
|
command: "OPEN"
|
||||||
|
feedback: {}
|
||||||
|
result:
|
||||||
|
success: success
|
||||||
|
close:
|
||||||
|
type: SendCmd
|
||||||
|
goal:
|
||||||
|
command: "CLOSED"
|
||||||
|
feedback: {}
|
||||||
|
result:
|
||||||
|
success: success
|
||||||
|
set_state:
|
||||||
|
type: SendCmd
|
||||||
|
goal:
|
||||||
|
command: command
|
||||||
|
feedback: {}
|
||||||
|
result:
|
||||||
|
success: success
|
||||||
|
handles:
|
||||||
|
- handler_key: in
|
||||||
|
label: in
|
||||||
|
data_type: fluid
|
||||||
|
side: NORTH
|
||||||
|
io_type: target
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_port_in
|
||||||
|
description: "电磁阀的进液口"
|
||||||
|
- handler_key: out
|
||||||
|
label: out
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_port_out
|
||||||
|
description: "电磁阀的出液口"
|
||||||
|
schema:
|
||||||
|
type: object
|
||||||
|
properties:
|
||||||
|
port:
|
||||||
|
type: string
|
||||||
|
default: "VIRTUAL"
|
||||||
|
voltage:
|
||||||
|
type: number
|
||||||
|
default: 12.0
|
||||||
|
response_time:
|
||||||
|
type: number
|
||||||
|
default: 0.1
|
||||||
additionalProperties: false
|
additionalProperties: false
|
||||||
|
|
||||||
virtual_centrifuge:
|
virtual_centrifuge:
|
||||||
@@ -154,9 +382,11 @@ virtual_centrifuge:
|
|||||||
min_temp: Float64
|
min_temp: Float64
|
||||||
centrifuge_state: String
|
centrifuge_state: String
|
||||||
time_remaining: Float64
|
time_remaining: Float64
|
||||||
|
progress: Float64
|
||||||
|
message: String
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
centrifuge:
|
centrifuge:
|
||||||
type: ProtocolCentrifuge
|
type: Centrifuge
|
||||||
goal:
|
goal:
|
||||||
vessel: vessel
|
vessel: vessel
|
||||||
speed: speed
|
speed: speed
|
||||||
@@ -170,6 +400,15 @@ virtual_centrifuge:
|
|||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
message: message
|
message: message
|
||||||
|
handles:
|
||||||
|
- handler_key: centrifuge
|
||||||
|
label: centrifuge
|
||||||
|
data_type: transport
|
||||||
|
side: NORTH
|
||||||
|
io_type: target
|
||||||
|
data_source: handle
|
||||||
|
data_key: vessel
|
||||||
|
description: "需要离心的样品容器"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
@@ -194,18 +433,17 @@ virtual_filter:
|
|||||||
type: python
|
type: python
|
||||||
status_types:
|
status_types:
|
||||||
status: String
|
status: String
|
||||||
filter_state: String
|
|
||||||
current_temp: Float64
|
|
||||||
target_temp: Float64
|
|
||||||
max_temp: Float64
|
|
||||||
stir_speed: Float64
|
|
||||||
max_stir_speed: Float64
|
|
||||||
filtered_volume: Float64
|
|
||||||
progress: Float64
|
progress: Float64
|
||||||
|
current_temp: Float64
|
||||||
|
filtered_volume: Float64
|
||||||
|
current_status: String
|
||||||
message: String
|
message: String
|
||||||
|
max_temp: Float64
|
||||||
|
max_stir_speed: Float64
|
||||||
|
max_volume: Float64
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
filter_sample:
|
filter:
|
||||||
type: ProtocolFilter
|
type: Filter
|
||||||
goal:
|
goal:
|
||||||
vessel: vessel
|
vessel: vessel
|
||||||
filtrate_vessel: filtrate_vessel
|
filtrate_vessel: filtrate_vessel
|
||||||
@@ -218,10 +456,36 @@ virtual_filter:
|
|||||||
progress: progress
|
progress: progress
|
||||||
current_temp: current_temp
|
current_temp: current_temp
|
||||||
filtered_volume: filtered_volume
|
filtered_volume: filtered_volume
|
||||||
current_status: status
|
current_status: current_status
|
||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
message: message
|
message: message
|
||||||
|
return_info: message
|
||||||
|
handles:
|
||||||
|
- handler_key: filter_in
|
||||||
|
label: filter_in
|
||||||
|
data_type: transport
|
||||||
|
side: NORTH
|
||||||
|
io_type: target
|
||||||
|
data_source: handle
|
||||||
|
data_key: vessel_in
|
||||||
|
description: "需要过滤的样品容器"
|
||||||
|
- handler_key: filtrate_out
|
||||||
|
label: filtrate_out
|
||||||
|
data_type: transport
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: filtrate_out
|
||||||
|
description: "滤液出口"
|
||||||
|
- handler_key: retentate_out
|
||||||
|
label: retentate_out
|
||||||
|
data_type: transport
|
||||||
|
side: EAST
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: retentate_out
|
||||||
|
description: "滤渣/固体出口"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
@@ -234,15 +498,22 @@ virtual_filter:
|
|||||||
max_stir_speed:
|
max_stir_speed:
|
||||||
type: number
|
type: number
|
||||||
default: 1000.0
|
default: 1000.0
|
||||||
|
max_volume:
|
||||||
|
type: number
|
||||||
|
default: 500.0
|
||||||
additionalProperties: false
|
additionalProperties: false
|
||||||
|
|
||||||
virtual_heatchill:
|
virtual_heatchill:
|
||||||
description: Virtual HeatChill for HeatChillProtocol Testing
|
description: Virtual HeatChill for HeatChillProtocol Testing
|
||||||
|
icon: Heater.webp
|
||||||
class:
|
class:
|
||||||
module: unilabos.devices.virtual.virtual_heatchill:VirtualHeatChill
|
module: unilabos.devices.virtual.virtual_heatchill:VirtualHeatChill
|
||||||
type: python
|
type: python
|
||||||
status_types:
|
status_types:
|
||||||
status: String
|
status: String
|
||||||
|
operation_mode: String
|
||||||
|
is_stirring: Bool
|
||||||
|
stir_speed: Float64
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
heat_chill:
|
heat_chill:
|
||||||
type: HeatChill
|
type: HeatChill
|
||||||
@@ -275,6 +546,15 @@ virtual_heatchill:
|
|||||||
status: status
|
status: status
|
||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
|
handles:
|
||||||
|
- handler_key: heatchill
|
||||||
|
label: heatchill
|
||||||
|
data_type: mechanical
|
||||||
|
side: NORTH
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: vessel
|
||||||
|
description: "加热/冷却器的物理连接口"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
@@ -286,14 +566,15 @@ virtual_heatchill:
|
|||||||
default: 200.0
|
default: 200.0
|
||||||
min_temp:
|
min_temp:
|
||||||
type: number
|
type: number
|
||||||
default: -80.0
|
default: -80
|
||||||
max_stir_speed:
|
max_stir_speed:
|
||||||
type: number
|
type: number
|
||||||
default: 1000.0
|
default: 1000.0
|
||||||
additionalProperties: false
|
additionalProperties: false
|
||||||
|
|
||||||
virtual_transfer_pump:
|
virtual_transfer_pump:
|
||||||
description: Virtual Transfer Pump for TransferProtocol Testing
|
description: Virtual Transfer Pump for TransferProtocol Testing (Syringe-style)
|
||||||
|
icon: Pump.webp
|
||||||
class:
|
class:
|
||||||
module: unilabos.devices.virtual.virtual_transferpump:VirtualTransferPump
|
module: unilabos.devices.virtual.virtual_transferpump:VirtualTransferPump
|
||||||
type: python
|
type: python
|
||||||
@@ -302,14 +583,10 @@ virtual_transfer_pump:
|
|||||||
current_volume: Float64
|
current_volume: Float64
|
||||||
max_volume: Float64
|
max_volume: Float64
|
||||||
transfer_rate: Float64
|
transfer_rate: Float64
|
||||||
from_vessel: String
|
position: Float64
|
||||||
to_vessel: String
|
|
||||||
progress: Float64
|
|
||||||
transferred_volume: Float64
|
|
||||||
current_status: String
|
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
transfer:
|
transfer:
|
||||||
type: ProtocolTransfer
|
type: Transfer
|
||||||
goal:
|
goal:
|
||||||
from_vessel: from_vessel
|
from_vessel: from_vessel
|
||||||
to_vessel: to_vessel
|
to_vessel: to_vessel
|
||||||
@@ -328,22 +605,46 @@ virtual_transfer_pump:
|
|||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
message: message
|
message: message
|
||||||
|
set_position:
|
||||||
|
type: SetPumpPosition
|
||||||
|
goal:
|
||||||
|
position: position
|
||||||
|
max_velocity: max_velocity
|
||||||
|
feedback:
|
||||||
|
status: status
|
||||||
|
current_position: current_position
|
||||||
|
progress: progress
|
||||||
|
result:
|
||||||
|
success: success
|
||||||
|
message: message
|
||||||
|
handles:
|
||||||
|
- handler_key: transferpump
|
||||||
|
label: transferpump
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_port
|
||||||
|
description: "注射器式转移泵的连接口"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
port:
|
port:
|
||||||
type: string
|
type: string
|
||||||
default: "VIRTUAL"
|
default: "VIRTUAL"
|
||||||
|
description: "通信端口"
|
||||||
max_volume:
|
max_volume:
|
||||||
type: number
|
type: number
|
||||||
default: 50.0
|
default: 50.0
|
||||||
|
description: "最大注射器容量 (mL)"
|
||||||
transfer_rate:
|
transfer_rate:
|
||||||
type: number
|
type: number
|
||||||
default: 5.0
|
default: 5.0
|
||||||
|
description: "默认转移速率 (mL/s)"
|
||||||
additionalProperties: false
|
additionalProperties: false
|
||||||
|
|
||||||
virtual_column:
|
virtual_column:
|
||||||
description: Virtual Column for RunColumn Protocol Testing
|
description: Virtual Column Chromatography Device for RunColumn Protocol Testing
|
||||||
class:
|
class:
|
||||||
module: unilabos.devices.virtual.virtual_column:VirtualColumn
|
module: unilabos.devices.virtual.virtual_column:VirtualColumn
|
||||||
type: python
|
type: python
|
||||||
@@ -359,17 +660,36 @@ virtual_column:
|
|||||||
current_status: String
|
current_status: String
|
||||||
action_value_mappings:
|
action_value_mappings:
|
||||||
run_column:
|
run_column:
|
||||||
type: ProtocolRunColumn
|
type: RunColumn
|
||||||
goal:
|
goal:
|
||||||
from_vessel: from_vessel
|
from_vessel: from_vessel
|
||||||
to_vessel: to_vessel
|
to_vessel: to_vessel
|
||||||
column: column
|
column: column
|
||||||
feedback:
|
feedback:
|
||||||
status: current_status
|
|
||||||
progress: progress
|
progress: progress
|
||||||
|
processed_volume: processed_volume
|
||||||
|
current_status: current_status
|
||||||
result:
|
result:
|
||||||
success: success
|
success: success
|
||||||
message: message
|
message: current_status
|
||||||
|
return_info: current_status
|
||||||
|
handles:
|
||||||
|
- handler_key: columnin
|
||||||
|
label: columnin
|
||||||
|
data_type: transport
|
||||||
|
side: WEST
|
||||||
|
io_type: target
|
||||||
|
data_source: handle
|
||||||
|
data_key: from_vessel
|
||||||
|
description: "样品输入口"
|
||||||
|
- handler_key: columnout
|
||||||
|
label: columnout
|
||||||
|
data_type: transport
|
||||||
|
side: EAST
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: to_vessel
|
||||||
|
description: "产物输出口"
|
||||||
schema:
|
schema:
|
||||||
type: object
|
type: object
|
||||||
properties:
|
properties:
|
||||||
@@ -385,4 +705,249 @@ virtual_column:
|
|||||||
column_diameter:
|
column_diameter:
|
||||||
type: number
|
type: number
|
||||||
default: 2.0
|
default: 2.0
|
||||||
|
additionalProperties: false
|
||||||
|
|
||||||
|
virtual_rotavap:
|
||||||
|
description: Virtual Rotary Evaporator for EvaporateProtocol Testing
|
||||||
|
icon: Rotaryevaporator.webp
|
||||||
|
class:
|
||||||
|
module: unilabos.devices.virtual.virtual_rotavap:VirtualRotavap
|
||||||
|
type: python
|
||||||
|
status_types:
|
||||||
|
status: String
|
||||||
|
rotavap_state: String
|
||||||
|
current_temp: Float64
|
||||||
|
rotation_speed: Float64
|
||||||
|
vacuum_pressure: Float64
|
||||||
|
evaporated_volume: Float64
|
||||||
|
progress: Float64
|
||||||
|
remaining_time: Float64
|
||||||
|
message: String
|
||||||
|
max_temp: Float64
|
||||||
|
max_rotation_speed: Float64
|
||||||
|
action_value_mappings:
|
||||||
|
evaporate:
|
||||||
|
type: Evaporate
|
||||||
|
goal:
|
||||||
|
vessel: vessel
|
||||||
|
pressure: pressure
|
||||||
|
temp: temp
|
||||||
|
time: time
|
||||||
|
stir_speed: stir_speed
|
||||||
|
feedback:
|
||||||
|
progress: progress
|
||||||
|
current_temp: current_temp
|
||||||
|
evaporated_volume: evaporated_volume
|
||||||
|
status: status
|
||||||
|
result:
|
||||||
|
success: success
|
||||||
|
message: message
|
||||||
|
handles:
|
||||||
|
- handler_key: sample_in
|
||||||
|
label: sample_in
|
||||||
|
data_type: fluid
|
||||||
|
side: NORTH
|
||||||
|
io_type: target
|
||||||
|
data_source: handle
|
||||||
|
data_key: vessel_in
|
||||||
|
description: "样品连接口"
|
||||||
|
- handler_key: product_out
|
||||||
|
label: product_out
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: product_out
|
||||||
|
description: "浓缩产物出口"
|
||||||
|
- handler_key: solvent_out
|
||||||
|
label: solvent_out
|
||||||
|
data_type: fluid
|
||||||
|
side: EAST
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: solvent_out
|
||||||
|
description: "冷凝溶剂出口"
|
||||||
|
schema:
|
||||||
|
type: object
|
||||||
|
properties:
|
||||||
|
port:
|
||||||
|
type: string
|
||||||
|
default: "VIRTUAL"
|
||||||
|
max_temp:
|
||||||
|
type: number
|
||||||
|
default: 180.0
|
||||||
|
max_rotation_speed:
|
||||||
|
type: number
|
||||||
|
default: 280.0
|
||||||
|
additionalProperties: false
|
||||||
|
|
||||||
|
virtual_separator:
|
||||||
|
description: Virtual Separator for SeparateProtocol Testing
|
||||||
|
icon: Separator.webp
|
||||||
|
class:
|
||||||
|
module: unilabos.devices.virtual.virtual_separator:VirtualSeparator
|
||||||
|
type: python
|
||||||
|
status_types:
|
||||||
|
status: String
|
||||||
|
separator_state: String
|
||||||
|
volume: Float64
|
||||||
|
has_phases: Bool
|
||||||
|
phase_separation: Bool
|
||||||
|
stir_speed: Float64
|
||||||
|
settling_time: Float64
|
||||||
|
progress: Float64
|
||||||
|
message: String
|
||||||
|
action_value_mappings:
|
||||||
|
separate:
|
||||||
|
type: Separate
|
||||||
|
goal:
|
||||||
|
purpose: purpose
|
||||||
|
product_phase: product_phase
|
||||||
|
from_vessel: from_vessel
|
||||||
|
separation_vessel: separation_vessel
|
||||||
|
to_vessel: to_vessel
|
||||||
|
waste_phase_to_vessel: waste_phase_to_vessel
|
||||||
|
solvent: solvent
|
||||||
|
solvent_volume: solvent_volume
|
||||||
|
through: through
|
||||||
|
repeats: repeats
|
||||||
|
stir_time: stir_time
|
||||||
|
stir_speed: stir_speed
|
||||||
|
settling_time: settling_time
|
||||||
|
feedback:
|
||||||
|
progress: progress
|
||||||
|
current_status: status
|
||||||
|
result:
|
||||||
|
success: success
|
||||||
|
message: message
|
||||||
|
handles:
|
||||||
|
- handler_key: separator_in
|
||||||
|
label: separator_in
|
||||||
|
data_type: fluid
|
||||||
|
side: NORTH
|
||||||
|
io_type: target
|
||||||
|
data_source: handle
|
||||||
|
data_key: from_vessel
|
||||||
|
description: "需要分离的混合液体输入口"
|
||||||
|
- handler_key: bottom_phase_out
|
||||||
|
label: bottom_phase_out
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: bottom_outlet
|
||||||
|
description: "下相（重相）液体输出口"
|
||||||
|
- handler_key: top_phase_out
|
||||||
|
label: top_phase_out
|
||||||
|
data_type: fluid
|
||||||
|
side: EAST
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: top_outlet
|
||||||
|
description: "上相（轻相）液体输出口"
|
||||||
|
schema:
|
||||||
|
type: object
|
||||||
|
properties:
|
||||||
|
port:
|
||||||
|
type: string
|
||||||
|
default: "VIRTUAL"
|
||||||
|
volume:
|
||||||
|
type: number
|
||||||
|
default: 250.0
|
||||||
|
has_phases:
|
||||||
|
type: boolean
|
||||||
|
default: true
|
||||||
|
additionalProperties: false
|
||||||
|
|
||||||
|
virtual_vacuum_pump:
|
||||||
|
description: Virtual vacuum pump
|
||||||
|
icon: Vacuum.webp
|
||||||
|
class:
|
||||||
|
module: unilabos.devices.virtual.virtual_vacuum_pump:VirtualVacuumPump
|
||||||
|
type: python
|
||||||
|
status_types:
|
||||||
|
status: String
|
||||||
|
action_value_mappings:
|
||||||
|
open:
|
||||||
|
type: EmptyIn
|
||||||
|
goal: {}
|
||||||
|
feedback: {}
|
||||||
|
result: {}
|
||||||
|
close:
|
||||||
|
type: EmptyIn
|
||||||
|
goal: {}
|
||||||
|
feedback: {}
|
||||||
|
result: {}
|
||||||
|
set_status:
|
||||||
|
type: StrSingleInput
|
||||||
|
goal:
|
||||||
|
string: string
|
||||||
|
feedback: {}
|
||||||
|
result: {}
|
||||||
|
handles:
|
||||||
|
- handler_key: vacuumpump
|
||||||
|
label: vacuumpump
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_in
|
||||||
|
description: "真空泵进气口"
|
||||||
|
schema:
|
||||||
|
type: object
|
||||||
|
properties:
|
||||||
|
port:
|
||||||
|
type: string
|
||||||
|
default: "VIRTUAL"
|
||||||
|
description: "通信端口"
|
||||||
|
additionalProperties: false
|
||||||
|
|
||||||
|
virtual_gas_source:
|
||||||
|
description: Virtual gas source
|
||||||
|
class:
|
||||||
|
module: unilabos.devices.virtual.virtual_gas_source:VirtualGasSource
|
||||||
|
type: python
|
||||||
|
status_types:
|
||||||
|
status: String
|
||||||
|
action_value_mappings:
|
||||||
|
open:
|
||||||
|
type: EmptyIn
|
||||||
|
goal: {}
|
||||||
|
feedback: {}
|
||||||
|
result: {}
|
||||||
|
close:
|
||||||
|
type: EmptyIn
|
||||||
|
goal: {}
|
||||||
|
feedback: {}
|
||||||
|
result: {}
|
||||||
|
set_status:
|
||||||
|
type: StrSingleInput
|
||||||
|
goal:
|
||||||
|
string: string
|
||||||
|
feedback: {}
|
||||||
|
result: {}
|
||||||
|
handles:
|
||||||
|
- handler_key: gassource
|
||||||
|
label: gassource
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
io_type: source
|
||||||
|
data_source: executor
|
||||||
|
data_key: fluid_out
|
||||||
|
description: "气源出气口"
|
||||||
|
schema:
|
||||||
|
type: object
|
||||||
|
properties:
|
||||||
|
port:
|
||||||
|
type: string
|
||||||
|
default: "VIRTUAL"
|
||||||
|
description: "通信端口"
|
||||||
|
gas_type:
|
||||||
|
type: string
|
||||||
|
default: "nitrogen"
|
||||||
|
description: "气体类型"
|
||||||
|
max_pressure:
|
||||||
|
type: number
|
||||||
|
default: 5.0
|
||||||
|
description: "最大输出压力 (bar)"
|
||||||
additionalProperties: false
|
additionalProperties: false
|
||||||
@@ -1,5 +0,0 @@
|
|||||||
container:
|
|
||||||
description: regular organic container
|
|
||||||
class:
|
|
||||||
module: unilabos.resources.container:RegularContainer
|
|
||||||
type: unilabos
|
|
||||||
27
unilabos/registry/resources/organic/container.yaml
Normal file
27
unilabos/registry/resources/organic/container.yaml
Normal file
@@ -0,0 +1,27 @@
|
|||||||
|
container:
|
||||||
|
description: regular organic container
|
||||||
|
class:
|
||||||
|
module: unilabos.resources.container:RegularContainer
|
||||||
|
type: unilabos
|
||||||
|
handles:
|
||||||
|
- handler_key: top
|
||||||
|
label: top
|
||||||
|
io_type: target
|
||||||
|
data_type: fluid
|
||||||
|
side: NORTH
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_in
|
||||||
|
- handler_key: bottom
|
||||||
|
label: bottom
|
||||||
|
io_type: source
|
||||||
|
data_type: fluid
|
||||||
|
side: SOUTH
|
||||||
|
data_source: handle
|
||||||
|
data_key: fluid_out
|
||||||
|
- handler_key: bind
|
||||||
|
label: bind
|
||||||
|
io_type: target
|
||||||
|
data_type: mechanical
|
||||||
|
side: SOUTH
|
||||||
|
data_source: handle
|
||||||
|
data_key: mechanical_port
|
||||||
@@ -1,7 +1,7 @@
|
|||||||
import importlib
|
import importlib
|
||||||
import inspect
|
import inspect
|
||||||
import json
|
import json
|
||||||
from typing import Union
|
from typing import Union, Any
|
||||||
import numpy as np
|
import numpy as np
|
||||||
import networkx as nx
|
import networkx as nx
|
||||||
from unilabos_msgs.msg import Resource
|
from unilabos_msgs.msg import Resource
|
||||||
@@ -84,6 +84,8 @@ def canonicalize_links_ports(data: dict) -> dict:
|
|||||||
# 第一遍处理：将字符串类型的port转换为字典格式
|
# 第一遍处理：将字符串类型的port转换为字典格式
|
||||||
for link in data.get("links", []):
|
for link in data.get("links", []):
|
||||||
port = link.get("port")
|
port = link.get("port")
|
||||||
|
if link["type"] == "physical":
|
||||||
|
link["type"] = "fluid"
|
||||||
if isinstance(port, int):
|
if isinstance(port, int):
|
||||||
port = str(port)
|
port = str(port)
|
||||||
if isinstance(port, str):
|
if isinstance(port, str):
|
||||||
@@ -157,7 +159,27 @@ def read_node_link_json(json_file):
|
|||||||
|
|
||||||
physical_setup_graph = nx.node_link_graph(data, multigraph=False) # edges="links" 3.6 warning
|
physical_setup_graph = nx.node_link_graph(data, multigraph=False) # edges="links" 3.6 warning
|
||||||
handle_communications(physical_setup_graph)
|
handle_communications(physical_setup_graph)
|
||||||
return physical_setup_graph
|
return physical_setup_graph, data
|
||||||
|
|
||||||
|
|
||||||
|
def modify_to_backend_format(data: list[dict[str, Any]]) -> list[dict[str, Any]]:
|
||||||
|
for edge in data:
|
||||||
|
port = edge.pop("port", {})
|
||||||
|
source = edge["source"]
|
||||||
|
target = edge["target"]
|
||||||
|
if source in port:
|
||||||
|
edge["sourceHandle"] = port[source]
|
||||||
|
elif "source_port" in edge:
|
||||||
|
edge["sourceHandle"] = edge.pop("source_port")
|
||||||
|
if target in port:
|
||||||
|
edge["targetHandle"] = port[target]
|
||||||
|
elif "target_port" in edge:
|
||||||
|
edge["targetHandle"] = edge.pop("target_port")
|
||||||
|
edge["id"] = f"reactflow__edge-{source}-{edge['sourceHandle']}-{target}-{edge['targetHandle']}"
|
||||||
|
for key in ["source_port", "target_port"]:
|
||||||
|
if key in edge:
|
||||||
|
edge.pop(key)
|
||||||
|
return data
|
||||||
|
|
||||||
|
|
||||||
def read_graphml(graphml_file):
|
def read_graphml(graphml_file):
|
||||||
@@ -182,7 +204,7 @@ def read_graphml(graphml_file):
|
|||||||
|
|
||||||
physical_setup_graph = nx.node_link_graph(data, edges="links", multigraph=False) # edges="links" 3.6 warning
|
physical_setup_graph = nx.node_link_graph(data, edges="links", multigraph=False) # edges="links" 3.6 warning
|
||||||
handle_communications(physical_setup_graph)
|
handle_communications(physical_setup_graph)
|
||||||
return physical_setup_graph
|
return physical_setup_graph, data
|
||||||
|
|
||||||
|
|
||||||
def dict_from_graph(graph: nx.Graph) -> dict:
|
def dict_from_graph(graph: nx.Graph) -> dict:
|
||||||
|
|||||||
@@ -45,6 +45,7 @@ def exit() -> None:
|
|||||||
def main(
|
def main(
|
||||||
devices_config: Dict[str, Any] = {},
|
devices_config: Dict[str, Any] = {},
|
||||||
resources_config: list=[],
|
resources_config: list=[],
|
||||||
|
resources_edge_config: list=[],
|
||||||
graph: Optional[Dict[str, Any]] = None,
|
graph: Optional[Dict[str, Any]] = None,
|
||||||
controllers_config: Dict[str, Any] = {},
|
controllers_config: Dict[str, Any] = {},
|
||||||
bridges: List[Any] = [],
|
bridges: List[Any] = [],
|
||||||
@@ -62,6 +63,7 @@ def main(
|
|||||||
"host_node",
|
"host_node",
|
||||||
devices_config,
|
devices_config,
|
||||||
resources_config,
|
resources_config,
|
||||||
|
resources_edge_config,
|
||||||
graph,
|
graph,
|
||||||
controllers_config,
|
controllers_config,
|
||||||
bridges,
|
bridges,
|
||||||
@@ -97,6 +99,7 @@ def main(
|
|||||||
def slave(
|
def slave(
|
||||||
devices_config: Dict[str, Any] = {},
|
devices_config: Dict[str, Any] = {},
|
||||||
resources_config=[],
|
resources_config=[],
|
||||||
|
resources_edge_config=[],
|
||||||
graph: Optional[Dict[str, Any]] = None,
|
graph: Optional[Dict[str, Any]] = None,
|
||||||
controllers_config: Dict[str, Any] = {},
|
controllers_config: Dict[str, Any] = {},
|
||||||
bridges: List[Any] = [],
|
bridges: List[Any] = [],
|
||||||
|
|||||||
@@ -100,7 +100,7 @@ _action_mapping: Dict[Type, Dict[str, Any]] = {
|
|||||||
|
|
||||||
# 添加Protocol action类型到映射
|
# 添加Protocol action类型到映射
|
||||||
for py_msgtype in imsg.__all__:
|
for py_msgtype in imsg.__all__:
|
||||||
if py_msgtype not in _action_mapping and py_msgtype.endswith("Protocol"):
|
if py_msgtype not in _action_mapping and (py_msgtype.endswith("Protocol") or py_msgtype.startswith("Protocol")):
|
||||||
try:
|
try:
|
||||||
protocol_class = msg_converter_manager.get_class(f"unilabos.messages.{py_msgtype}")
|
protocol_class = msg_converter_manager.get_class(f"unilabos.messages.{py_msgtype}")
|
||||||
action_name = py_msgtype.replace("Protocol", "")
|
action_name = py_msgtype.replace("Protocol", "")
|
||||||
@@ -117,6 +117,7 @@ for py_msgtype in imsg.__all__:
|
|||||||
"result": {k: k for k in action_type.Result().get_fields_and_field_types().keys()},
|
"result": {k: k for k in action_type.Result().get_fields_and_field_types().keys()},
|
||||||
}
|
}
|
||||||
except Exception:
|
except Exception:
|
||||||
|
traceback.print_exc()
|
||||||
logger.debug(f"Failed to load Protocol class: {py_msgtype}")
|
logger.debug(f"Failed to load Protocol class: {py_msgtype}")
|
||||||
|
|
||||||
# Python到ROS消息转换器
|
# Python到ROS消息转换器
|
||||||
|
|||||||
@@ -22,6 +22,7 @@ from unilabos_msgs.srv import (
|
|||||||
) # type: ignore
|
) # type: ignore
|
||||||
from unique_identifier_msgs.msg import UUID
|
from unique_identifier_msgs.msg import UUID
|
||||||
|
|
||||||
|
from unilabos.config.config import BasicConfig
|
||||||
from unilabos.registry.registry import lab_registry
|
from unilabos.registry.registry import lab_registry
|
||||||
from unilabos.resources.graphio import initialize_resource
|
from unilabos.resources.graphio import initialize_resource
|
||||||
from unilabos.resources.registry import add_schema
|
from unilabos.resources.registry import add_schema
|
||||||
@@ -58,6 +59,7 @@ class HostNode(BaseROS2DeviceNode):
|
|||||||
device_id: str,
|
device_id: str,
|
||||||
devices_config: Dict[str, Any],
|
devices_config: Dict[str, Any],
|
||||||
resources_config: list,
|
resources_config: list,
|
||||||
|
resources_edge_config: list[dict],
|
||||||
physical_setup_graph: Optional[Dict[str, Any]] = None,
|
physical_setup_graph: Optional[Dict[str, Any]] = None,
|
||||||
controllers_config: Optional[Dict[str, Any]] = None,
|
controllers_config: Optional[Dict[str, Any]] = None,
|
||||||
bridges: Optional[List[Any]] = None,
|
bridges: Optional[List[Any]] = None,
|
||||||
@@ -96,6 +98,7 @@ class HostNode(BaseROS2DeviceNode):
|
|||||||
self.server_latest_timestamp = 0.0 #
|
self.server_latest_timestamp = 0.0 #
|
||||||
self.devices_config = devices_config
|
self.devices_config = devices_config
|
||||||
self.resources_config = resources_config
|
self.resources_config = resources_config
|
||||||
|
self.resources_edge_config = resources_edge_config
|
||||||
self.physical_setup_graph = physical_setup_graph
|
self.physical_setup_graph = physical_setup_graph
|
||||||
if controllers_config is None:
|
if controllers_config is None:
|
||||||
controllers_config = {}
|
controllers_config = {}
|
||||||
@@ -144,13 +147,15 @@ class HostNode(BaseROS2DeviceNode):
|
|||||||
|
|
||||||
self.device_status = {} # 用来存储设备状态
|
self.device_status = {} # 用来存储设备状态
|
||||||
self.device_status_timestamps = {} # 用来存储设备状态最后更新时间
|
self.device_status_timestamps = {} # 用来存储设备状态最后更新时间
|
||||||
|
if BasicConfig.upload_registry:
|
||||||
|
from unilabos.app.mq import mqtt_client
|
||||||
|
|
||||||
from unilabos.app.mq import mqtt_client
|
for device_info in lab_registry.obtain_registry_device_info():
|
||||||
|
mqtt_client.publish_registry(device_info["id"], device_info)
|
||||||
for device_info in lab_registry.obtain_registry_device_info():
|
for resource_info in lab_registry.obtain_registry_resource_info():
|
||||||
mqtt_client.publish_registry(device_info["id"], device_info)
|
mqtt_client.publish_registry(resource_info["id"], resource_info)
|
||||||
for resource_info in lab_registry.obtain_registry_resource_info():
|
else:
|
||||||
mqtt_client.publish_registry(resource_info["id"], resource_info)
|
self.lab_logger().warning("本次启动注册表不报送云端，如果您需要联网调试，请使用unilab-register命令进行单独报送，或者在启动命令增加--upload_registry")
|
||||||
time.sleep(1) # 等待MQTT连接稳定
|
time.sleep(1) # 等待MQTT连接稳定
|
||||||
# 首次发现网络中的设备
|
# 首次发现网络中的设备
|
||||||
self._discover_devices()
|
self._discover_devices()
|
||||||
@@ -191,24 +196,36 @@ class HostNode(BaseROS2DeviceNode):
|
|||||||
)
|
)
|
||||||
resource_with_parent_name = []
|
resource_with_parent_name = []
|
||||||
resource_ids_to_instance = {i["id"]: i for i in resources_config}
|
resource_ids_to_instance = {i["id"]: i for i in resources_config}
|
||||||
|
resource_name_to_with_parent_name = {}
|
||||||
for res in resources_config:
|
for res in resources_config:
|
||||||
if res.get("parent") and res.get("type") == "device" and res.get("class"):
|
# if res.get("parent") and res.get("type") == "device" and res.get("class"):
|
||||||
parent_id = res.get("parent")
|
# parent_id = res.get("parent")
|
||||||
parent_res = resource_ids_to_instance[parent_id]
|
# parent_res = resource_ids_to_instance[parent_id]
|
||||||
if parent_res.get("type") == "device" and parent_res.get("class"):
|
# if parent_res.get("type") == "device" and parent_res.get("class"):
|
||||||
resource_with_parent_name.append(copy.deepcopy(res))
|
# resource_with_parent_name.append(copy.deepcopy(res))
|
||||||
resource_with_parent_name[-1]["id"] = f"{parent_res['id']}/{res['id']}"
|
# resource_name_to_with_parent_name[resource_with_parent_name[-1]["id"]] = f"{parent_res['id']}/{res['id']}"
|
||||||
continue
|
# resource_with_parent_name[-1]["id"] = f"{parent_res['id']}/{res['id']}"
|
||||||
|
# continue
|
||||||
resource_with_parent_name.append(copy.deepcopy(res))
|
resource_with_parent_name.append(copy.deepcopy(res))
|
||||||
|
# for edge in self.resources_edge_config:
|
||||||
|
# edge["source"] = resource_name_to_with_parent_name.get(edge.get("source"), edge.get("source"))
|
||||||
|
# edge["target"] = resource_name_to_with_parent_name.get(edge.get("target"), edge.get("target"))
|
||||||
try:
|
try:
|
||||||
for bridge in self.bridges:
|
for bridge in self.bridges:
|
||||||
if hasattr(bridge, "resource_add"):
|
if hasattr(bridge, "resource_add"):
|
||||||
|
from unilabos.app.web.client import HTTPClient
|
||||||
|
client: HTTPClient = bridge
|
||||||
resource_start_time = time.time()
|
resource_start_time = time.time()
|
||||||
resource_add_res = bridge.resource_add(add_schema(resource_with_parent_name), True)
|
resource_add_res = client.resource_add(add_schema(resource_with_parent_name), False)
|
||||||
resource_end_time = time.time()
|
resource_end_time = time.time()
|
||||||
self.lab_logger().info(
|
self.lab_logger().info(
|
||||||
f"[Host Node-Resource] 物料上传 {round(resource_end_time - resource_start_time, 5) * 1000} ms"
|
f"[Host Node-Resource] 物料上传 {round(resource_end_time - resource_start_time, 5) * 1000} ms"
|
||||||
)
|
)
|
||||||
|
resource_add_res = client.resource_edge_add(self.resources_edge_config, False)
|
||||||
|
resource_edge_end_time = time.time()
|
||||||
|
self.lab_logger().info(
|
||||||
|
f"[Host Node-Resource] 物料关系上传 {round(resource_edge_end_time - resource_end_time, 5) * 1000} ms"
|
||||||
|
)
|
||||||
except Exception as ex:
|
except Exception as ex:
|
||||||
self.lab_logger().error("[Host Node-Resource] 添加物料出错！")
|
self.lab_logger().error("[Host Node-Resource] 添加物料出错！")
|
||||||
self.lab_logger().error(traceback.format_exc())
|
self.lab_logger().error(traceback.format_exc())
|
||||||
@@ -757,8 +774,10 @@ class HostNode(BaseROS2DeviceNode):
|
|||||||
self.lab_logger().info(f"[Host Node-Resource] Add request received: {len(resources)} resources")
|
self.lab_logger().info(f"[Host Node-Resource] Add request received: {len(resources)} resources")
|
||||||
|
|
||||||
success = False
|
success = False
|
||||||
if len(self.bridges) > 0:
|
if len(self.bridges) > 0: # 边的提交待定
|
||||||
r = self.bridges[-1].resource_add(add_schema(resources))
|
from unilabos.app.web.client import HTTPClient
|
||||||
|
client: HTTPClient = self.bridges[-1]
|
||||||
|
r = client.resource_add(add_schema(resources), False)
|
||||||
success = bool(r)
|
success = bool(r)
|
||||||
|
|
||||||
response.success = success
|
response.success = success
|
||||||
|
|||||||
@@ -110,7 +110,8 @@ class ROS2ProtocolNode(BaseROS2DeviceNode):
|
|||||||
|
|
||||||
def initialize_device(self, device_id, device_config):
|
def initialize_device(self, device_id, device_config):
|
||||||
"""初始化设备并创建相应的动作客户端"""
|
"""初始化设备并创建相应的动作客户端"""
|
||||||
device_id_abs = f"{self.device_id}/{device_id}"
|
# device_id_abs = f"{self.device_id}/{device_id}"
|
||||||
|
device_id_abs = f"{device_id}"
|
||||||
self.lab_logger().info(f"初始化子设备: {device_id_abs}")
|
self.lab_logger().info(f"初始化子设备: {device_id_abs}")
|
||||||
d = self.sub_devices[device_id] = initialize_device_from_dict(device_id_abs, device_config)
|
d = self.sub_devices[device_id] = initialize_device_from_dict(device_id_abs, device_config)
|
||||||
|
|
||||||
@@ -213,7 +214,7 @@ class ROS2ProtocolNode(BaseROS2DeviceNode):
|
|||||||
if device_id in ["", None, "self"]:
|
if device_id in ["", None, "self"]:
|
||||||
action_id = f"/devices/{self.device_id}/{action_name}"
|
action_id = f"/devices/{self.device_id}/{action_name}"
|
||||||
else:
|
else:
|
||||||
action_id = f"/devices/{self.device_id}/{device_id}/{action_name}"
|
action_id = f"/devices/{device_id}/{action_name}" # 执行时取消了主节点信息 /{self.device_id}
|
||||||
|
|
||||||
# 检查动作客户端是否存在
|
# 检查动作客户端是否存在
|
||||||
if action_id not in self._action_clients:
|
if action_id not in self._action_clients:
|
||||||
|
|||||||
@@ -29,24 +29,24 @@ set(action_files
|
|||||||
"action/HeatChillStart.action"
|
"action/HeatChillStart.action"
|
||||||
"action/HeatChillStop.action"
|
"action/HeatChillStop.action"
|
||||||
|
|
||||||
"action/ProtocolCleanVessel.action"
|
"action/CleanVessel.action"
|
||||||
"action/ProtocolDissolve.action"
|
"action/Dissolve.action"
|
||||||
"action/ProtocolFilterThrough.action"
|
"action/FilterThrough.action"
|
||||||
"action/ProtocolRunColumn.action"
|
"action/RunColumn.action"
|
||||||
"action/ProtocolWait.action"
|
"action/Wait.action"
|
||||||
"action/ProtocolWashSolid.action"
|
"action/WashSolid.action"
|
||||||
"action/ProtocolFilter.action"
|
"action/Filter.action"
|
||||||
|
"action/Add.action"
|
||||||
"action/ProtocolCentrifuge.action"
|
"action/Centrifuge.action"
|
||||||
"action/ProtocolCrystallize.action"
|
"action/Crystallize.action"
|
||||||
"action/ProtocolDry.action"
|
"action/Dry.action"
|
||||||
"action/ProtocolPurge.action"
|
"action/Purge.action"
|
||||||
"action/ProtocolStartPurge.action"
|
"action/StartPurge.action"
|
||||||
"action/ProtocolStartStir.action"
|
"action/StartStir.action"
|
||||||
"action/ProtocolStopPurge.action"
|
"action/StopPurge.action"
|
||||||
"action/ProtocolStopStir.action"
|
"action/StopStir.action"
|
||||||
"action/ProtocolTransfer.action"
|
"action/Transfer.action"
|
||||||
|
"action/SetPumpPosition.action"
|
||||||
"action/LiquidHandlerProtocolCreation.action"
|
"action/LiquidHandlerProtocolCreation.action"
|
||||||
"action/LiquidHandlerAspirate.action"
|
"action/LiquidHandlerAspirate.action"
|
||||||
"action/LiquidHandlerDiscardTips.action"
|
"action/LiquidHandlerDiscardTips.action"
|
||||||
|
|||||||
13
unilabos_msgs/action/SetPumpPosition.action
Normal file
13
unilabos_msgs/action/SetPumpPosition.action
Normal file
@@ -0,0 +1,13 @@
|
|||||||
|
# Goal - 目标参数
|
||||||
|
float64 position # 目标位置 (ml)
|
||||||
|
float64 max_velocity # 最大速度 (ml/s)
|
||||||
|
---
|
||||||
|
# Result - 结果
|
||||||
|
string return_info
|
||||||
|
bool success # 操作是否成功
|
||||||
|
string message # 操作结果消息
|
||||||
|
---
|
||||||
|
# Feedback - 反馈
|
||||||
|
string status # 当前状态
|
||||||
|
float64 current_position # 当前位置
|
||||||
|
float64 progress # 进度百分比 (0-100)
|
||||||
Reference in New Issue
Block a user