feat: RNA refine Bioyond siRNA Experiment 1 submission

unilabos/resources/bioyond/sirna_materials.py

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+"""Sirna Station Material Resource Definitions
+
+Defines PyLabRobot resource classes for Bioyond Sirna station materials.
+Each class is decorated with @resource for AST-based registry discovery.
+"""
+
+from typing import Optional
+from collections import OrderedDict
+from pylabrobot.resources import Plate, TipRack, Container
+
+from unilabos.registry.decorators import resource
+
+
+@resource(
+    id="bioyond_sirna_g3_200ul_tip_rack",
+    category=["labware", "tip_rack"],
+    description="G3-200ul枪头盒 for Sirna station",
+)
+class BioyondSirna_G3_200ul_TipRack(TipRack):
+    """G3-200ul tip rack for Sirna liquid handling."""
+
+    def __init__(
+        self,
+        name: str,
+        with_tips: bool = True,
+    ):
+        super().__init__(
+            name=name,
+            size_x=127.76,
+            size_y=85.48,
+            size_z=64.0,
+            model="bioyond_sirna_g3_200ul_tip_rack",
+            with_tips=with_tips,
+            ordering=OrderedDict(),  # Empty ordering to satisfy PyLabRobot requirement
+        )
+
+
+@resource(
+    id="bioyond_sirna_g3_50ul_tip_rack",
+    category=["labware", "tip_rack"],
+    description="G3-50ul枪头盒 for Sirna station",
+)
+class BioyondSirna_G3_50ul_TipRack(TipRack):
+    """G3-50ul tip rack for Sirna liquid handling."""
+
+    def __init__(
+        self,
+        name: str,
+        with_tips: bool = True,
+    ):
+        super().__init__(
+            name=name,
+            size_x=127.76,
+            size_y=85.48,
+            size_z=64.0,
+            model="bioyond_sirna_g3_50ul_tip_rack",
+            with_tips=with_tips,
+            ordering=OrderedDict(),  # Empty ordering to satisfy PyLabRobot requirement
+        )
+
+
+@resource(
+    id="bioyond_sirna_384_well_plate",
+    category=["labware", "plate"],
+    description="384孔板 for Sirna assays",
+)
+class BioyondSirna_384WellPlate(Plate):
+    """384-well plate for Sirna reporter gene detection."""
+
+    def __init__(
+        self,
+        name: str,
+        lid: Optional[object] = None,
+    ):
+        super().__init__(
+            name=name,
+            size_x=127.76,
+            size_y=85.48,
+            size_z=14.35,
+            lid=lid,
+            model="bioyond_sirna_384_well_plate",
+            plate_type="skirted",
+        )
+
+
+@resource(
+    id="bioyond_sirna_cell_culture_plate",
+    category=["labware", "plate"],
+    description="细胞培养板 for Sirna cell culture",
+)
+class BioyondSirna_CellCulturePlate(Plate):
+    """Cell culture plate for Sirna experiments."""
+
+    def __init__(
+        self,
+        name: str,
+        lid: Optional[object] = None,
+    ):
+        super().__init__(
+            name=name,
+            size_x=127.76,
+            size_y=85.48,
+            size_z=14.35,
+            lid=lid,
+            model="bioyond_sirna_cell_culture_plate",
+            plate_type="skirted",
+        )
+
+
+@resource(
+    id="bioyond_sirna_reagent_trough",
+    category=["labware", "trough"],
+    description="试剂槽 for Sirna reagents",
+)
+class BioyondSirna_ReagentTrough(Container):
+    """Reagent trough for Sirna station reagents (RiboGreen, etc.)."""
+
+    def __init__(
+        self,
+        name: str,
+        max_volume: float = 300000.0,  # 300mL default
+    ):
+        super().__init__(
+            name=name,
+            size_x=127.76,
+            size_y=85.48,
+            size_z=44.0,
+            max_volume=max_volume,
+            model="bioyond_sirna_reagent_trough",
+        )
+
+
+# Material type code mapping for dynamic instantiation
+MATERIAL_TYPE_CODE_TO_CLASS = {
+    "0016": BioyondSirna_G3_200ul_TipRack,
+    "0017": BioyondSirna_G3_50ul_TipRack,
+    "0015": BioyondSirna_384WellPlate,
+    "0001": BioyondSirna_CellCulturePlate,
+    "0006": BioyondSirna_ReagentTrough,
+}
+
+
+def get_material_class_by_type_code(type_code: str):
+    """Get resource class by Bioyond material type code.
+
+    Args:
+        type_code: Bioyond materialTypeCode (e.g., "0016", "0017")
+
+    Returns:
+        Resource class or None if not found
+    """
+    return MATERIAL_TYPE_CODE_TO_CLASS.get(type_code)